BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780319|ref|YP_003064732.1| 50S ribosomal protein L35
[Candidatus Liberibacter asiaticus str. psy62]
         (67 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780319|ref|YP_003064732.1| 50S ribosomal protein L35 [Candidatus Liberibacter asiaticus str.
          psy62]
 gi|254039996|gb|ACT56792.1| 50S ribosomal protein L35 [Candidatus Liberibacter asiaticus str.
          psy62]
          Length = 67

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/67 (100%), Positives = 67/67 (100%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR
Sbjct: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60

Query: 61 NYLPNGI 67
          NYLPNGI
Sbjct: 61 NYLPNGI 67


>gi|315122257|ref|YP_004062746.1| 50S ribosomal protein L35 [Candidatus Liberibacter solanacearum
          CLso-ZC1]
 gi|313495659|gb|ADR52258.1| 50S ribosomal protein L35 [Candidatus Liberibacter solanacearum
          CLso-ZC1]
          Length = 67

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 65/67 (97%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSSSKKRFSITA+GKV+AQAAGKRHGMIKRSNKFIRNARG MVL +ADAKK+IR
Sbjct: 1  MPKMKTNSSSKKRFSITASGKVKAQAAGKRHGMIKRSNKFIRNARGAMVLGAADAKKIIR 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|15964036|ref|NP_384389.1| 50S ribosomal protein L35 [Sinorhizobium meliloti 1021]
 gi|150398670|ref|YP_001329137.1| 50S ribosomal protein L35 [Sinorhizobium medicae WSM419]
 gi|307301182|ref|ZP_07580944.1| ribosomal protein L35 [Sinorhizobium meliloti BL225C]
 gi|307321083|ref|ZP_07600488.1| ribosomal protein L35 [Sinorhizobium meliloti AK83]
 gi|20139569|sp|Q92ST2|RL35_RHIME RecName: Full=50S ribosomal protein L35
 gi|166199838|sp|A6UF72|RL35_SINMW RecName: Full=50S ribosomal protein L35
 gi|15073212|emb|CAC41720.1| Probable 50S ribosomal protein L35 [Sinorhizobium meliloti 1021]
 gi|150030185|gb|ABR62302.1| ribosomal protein L35 [Sinorhizobium medicae WSM419]
 gi|306893255|gb|EFN24036.1| ribosomal protein L35 [Sinorhizobium meliloti AK83]
 gi|306903638|gb|EFN34225.1| ribosomal protein L35 [Sinorhizobium meliloti BL225C]
          Length = 67

 Score =  117 bits (292), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKVRA AAGKRHGMIKRSNKFIR+ARGTMVLA  D KKV++
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVRAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|222147171|ref|YP_002548128.1| 50S ribosomal protein L35 [Agrobacterium vitis S4]
 gi|254802424|sp|B9JYM8|RL35_AGRVS RecName: Full=50S ribosomal protein L35
 gi|221734161|gb|ACM35124.1| 50S ribosomal protein L35 [Agrobacterium vitis S4]
          Length = 67

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV A AAGKRHGMIKRSNKFIRNARGTMVLA AD KKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVLAAAAGKRHGMIKRSNKFIRNARGTMVLAEADGKKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|227824126|ref|YP_002828099.1| 50S ribosomal protein L35 [Sinorhizobium fredii NGR234]
 gi|254802466|sp|C3MCP8|RL35_RHISN RecName: Full=50S ribosomal protein L35
 gi|227343128|gb|ACP27346.1| 50S ribosomal protein L35 [Sinorhizobium fredii NGR234]
          Length = 67

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKVRA AAGKRHGMIKR+NKFIR+ARGTMVLA  D KKV++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVRAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|116250035|ref|YP_765873.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. viciae
          3841]
 gi|222084529|ref|YP_002543058.1| ribosomal protein L35 [Agrobacterium radiobacter K84]
 gi|148887101|sp|Q1MMP5|RL35_RHIL3 RecName: Full=50S ribosomal protein L35
 gi|254802401|sp|B9J7G1|RL35_AGRRK RecName: Full=50S ribosomal protein L35
 gi|115254683|emb|CAK05757.1| putative 50S ribosomal protein L35 [Rhizobium leguminosarum bv.
          viciae 3841]
 gi|221721977|gb|ACM25133.1| ribosomal protein L35 [Agrobacterium radiobacter K84]
          Length = 67

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|15887605|ref|NP_353286.1| 50S ribosomal protein L35 [Agrobacterium tumefaciens str. C58]
 gi|325291691|ref|YP_004277555.1| 50S ribosomal protein L35 [Agrobacterium sp. H13-3]
 gi|22096093|sp|Q8UIN8|RL35_AGRT5 RecName: Full=50S ribosomal protein L35
 gi|15155148|gb|AAK86071.1| 50S ribosomal protein L35 [Agrobacterium tumefaciens str. C58]
 gi|325059544|gb|ADY63235.1| 50S ribosomal protein L35 [Agrobacterium sp. H13-3]
          Length = 67

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF ITATGKV A AAGKRHGMIKR+NKFIR+ARGTMVLA AD KKV++
Sbjct: 1  MPKMKTKSAAKKRFKITATGKVVAAAAGKRHGMIKRTNKFIRDARGTMVLAEADGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|190889927|ref|YP_001976469.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 652]
 gi|209551836|ref|YP_002283753.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|218459865|ref|ZP_03499956.1| 50S ribosomal protein L35 [Rhizobium etli Kim 5]
 gi|218680047|ref|ZP_03527944.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 894]
 gi|226725054|sp|B3PYE0|RL35_RHIE6 RecName: Full=50S ribosomal protein L35
 gi|226725055|sp|B5ZXR8|RL35_RHILW RecName: Full=50S ribosomal protein L35
 gi|190695206|gb|ACE89291.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 652]
 gi|209537592|gb|ACI57527.1| ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 67

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV+A AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|241207214|ref|YP_002978310.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM1325]
 gi|240861104|gb|ACS58771.1| ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 67

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|319898274|ref|YP_004158367.1| 50S ribosomal protein L35 [Bartonella clarridgeiae 73]
 gi|319402238|emb|CBI75771.1| 50S ribosomal protein L35 [Bartonella clarridgeiae 73]
          Length = 67

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV+A AAGKRHGMIKRSNKFIR+ARG MVLA  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVKAAAAGKRHGMIKRSNKFIRDARGMMVLAEQDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|319404993|emb|CBI78602.1| 50S ribosomal protein L35 [Bartonella sp. AR 15-3]
          Length = 67

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGK++A AAGKRHGMIKRSNKFIR+ARG MVLA +DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKIKAAAAGKRHGMIKRSNKFIRDARGMMVLAESDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|319403567|emb|CBI77149.1| 50S ribosomal protein L35 [Bartonella rochalimae ATCC BAA-1498]
 gi|319406479|emb|CBI80120.1| 50S ribosomal protein L35 [Bartonella sp. 1-1C]
          Length = 67

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV+A AAGKRHGMIKRSNKFIR+ARG MVLA  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVKAAAAGKRHGMIKRSNKFIRDARGMMVLAEPDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|49474904|ref|YP_032945.1| 50S ribosomal protein L35 [Bartonella henselae str. Houston-1]
 gi|54036258|sp|Q6G5E5|RL35_BARHE RecName: Full=50S ribosomal protein L35
 gi|49237709|emb|CAF26898.1| 50S ribosomal protein l35 [Bartonella henselae str. Houston-1]
          Length = 67

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+  AAGKRHGMIKRSNKFIR+ARGTMVL+  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKVAAAGKRHGMIKRSNKFIRDARGTMVLSEQDAKKVIQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGL 67


>gi|121602467|ref|YP_989563.1| 50S ribosomal protein L35 [Bartonella bacilliformis KC583]
 gi|166231157|sp|A1UUB0|RL35_BARBK RecName: Full=50S ribosomal protein L35
 gi|120614644|gb|ABM45245.1| ribosomal protein L35 [Bartonella bacilliformis KC583]
          Length = 67

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGK++  AAGKRHGMIKRSNKFIR+ARGTM+LA  DAKKVI 
Sbjct: 1  MPKMKTKSSAKKRFKITATGKIKVAAAGKRHGMIKRSNKFIRDARGTMILAEPDAKKVIH 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|240849767|ref|YP_002971155.1| 50S ribosomal protein L35 [Bartonella grahamii as4aup]
 gi|240266890|gb|ACS50478.1| 50S ribosomal protein L35 [Bartonella grahamii as4aup]
          Length = 67

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GK++  AAGKRHGMIKRSNKFIR+ARGTMVL   DAKKV++
Sbjct: 1  MPKMKTKSSAKKRFKITASGKIKVAAAGKRHGMIKRSNKFIRDARGTMVLCEQDAKKVVQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGV 67


>gi|163867393|ref|YP_001608587.1| 50S ribosomal protein L35 [Bartonella tribocorum CIP 105476]
 gi|189042756|sp|A9ILR1|RL35_BART1 RecName: Full=50S ribosomal protein L35
 gi|161017034|emb|CAK00592.1| 50S ribosomal protein L35 [Bartonella tribocorum CIP 105476]
          Length = 67

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TA+GK++  AAGKRHGMIKRSNKFIR+ARGTMVL   DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTASGKIKVAAAGKRHGMIKRSNKFIRDARGTMVLCEQDAKKVIQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGL 67


>gi|86355919|ref|YP_467811.1| 50S ribosomal protein L35 [Rhizobium etli CFN 42]
 gi|148887100|sp|Q2KDK2|RL35_RHIEC RecName: Full=50S ribosomal protein L35
 gi|86280021|gb|ABC89084.1| 50S ribosomal protein L35 [Rhizobium etli CFN 42]
          Length = 67

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF ITA+GKV+A AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KV++
Sbjct: 1  MPKMKTKSAAKKRFKITASGKVKAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|13474220|ref|NP_105788.1| 50S ribosomal protein L35 [Mesorhizobium loti MAFF303099]
 gi|260463244|ref|ZP_05811446.1| ribosomal protein L35 [Mesorhizobium opportunistum WSM2075]
 gi|319780187|ref|YP_004139663.1| ribosomal protein L35 [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
 gi|20139629|sp|Q98CP7|RL35_RHILO RecName: Full=50S ribosomal protein L35
 gi|14024972|dbj|BAB51574.1| ribosomal protein L35 [Mesorhizobium loti MAFF303099]
 gi|259031094|gb|EEW32368.1| ribosomal protein L35 [Mesorhizobium opportunistum WSM2075]
 gi|317166075|gb|ADV09613.1| ribosomal protein L35 [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
          Length = 67

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV + AAGKRHGMIKRSNKFIRNARGTMVLA  D KKVI+
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIK 60

Query: 61 NYLPNGI 67
          N+LPNG+
Sbjct: 61 NFLPNGL 67


>gi|49473758|ref|YP_031800.1| 50S ribosomal protein L35 [Bartonella quintana str. Toulouse]
 gi|54036257|sp|Q6G1G3|RL35_BARQU RecName: Full=50S ribosomal protein L35
 gi|49239261|emb|CAF25582.1| 50s ribosomal protein l35 [Bartonella quintana str. Toulouse]
          Length = 67

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+  AAGKRHGMIKRSNKFIR+ARGTMVL+  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKVAAAGKRHGMIKRSNKFIRDARGTMVLSDQDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG 
Sbjct: 61 YYLPNGF 67


>gi|319407948|emb|CBI81602.1| 50S ribosomal protein L35 [Bartonella schoenbuchensis R1]
          Length = 67

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA G+V+A AAGKRHGMIKRSNKFIR+ARGTM+LA +DAKK+ +
Sbjct: 1  MPKMKTKSSAKKRFKITALGRVKAAAAGKRHGMIKRSNKFIRDARGTMILAESDAKKITQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 YYLPNGL 67


>gi|17988291|ref|NP_540925.1| 50S ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|23502967|ref|NP_699094.1| 50S ribosomal protein L35 [Brucella suis 1330]
 gi|62290959|ref|YP_222752.1| 50S ribosomal protein L35 [Brucella abortus bv. 1 str. 9-941]
 gi|82700870|ref|YP_415444.1| 50S ribosomal protein L35 [Brucella melitensis biovar Abortus
          2308]
 gi|163844135|ref|YP_001628539.1| 50S ribosomal protein L35 [Brucella suis ATCC 23445]
 gi|189025173|ref|YP_001935941.1| 50S ribosomal protein L35 [Brucella abortus S19]
 gi|225853546|ref|YP_002733779.1| 50S ribosomal protein L35 [Brucella melitensis ATCC 23457]
 gi|254690254|ref|ZP_05153508.1| hypothetical protein Babob68_08797 [Brucella abortus bv. 6 str.
          870]
 gi|254694741|ref|ZP_05156569.1| hypothetical protein Babob3T_08788 [Brucella abortus bv. 3 str.
          Tulya]
 gi|254696370|ref|ZP_05158198.1| hypothetical protein Babob28_01298 [Brucella abortus bv. 2 str.
          86/8/59]
 gi|254700751|ref|ZP_05162579.1| hypothetical protein Bsuib55_07822 [Brucella suis bv. 5 str. 513]
 gi|254705123|ref|ZP_05166951.1| hypothetical protein Bsuib36_14606 [Brucella suis bv. 3 str. 686]
 gi|254707361|ref|ZP_05169189.1| hypothetical protein BpinM_10410 [Brucella pinnipedialis
          M163/99/10]
 gi|254709096|ref|ZP_05170907.1| hypothetical protein BpinB_02282 [Brucella pinnipedialis B2/94]
 gi|254713478|ref|ZP_05175289.1| hypothetical protein BcetM6_09009 [Brucella ceti M644/93/1]
 gi|254716166|ref|ZP_05177977.1| hypothetical protein BcetM_06991 [Brucella ceti M13/05/1]
 gi|254718162|ref|ZP_05179973.1| hypothetical protein Bru83_01201 [Brucella sp. 83/13]
 gi|254731284|ref|ZP_05189862.1| hypothetical protein Babob42_08820 [Brucella abortus bv. 4 str.
          292]
 gi|256030621|ref|ZP_05444235.1| hypothetical protein BpinM2_08207 [Brucella pinnipedialis
          M292/94/1]
 gi|256045724|ref|ZP_05448602.1| hypothetical protein Bmelb1R_14560 [Brucella melitensis bv. 1
          str. Rev.1]
 gi|256112445|ref|ZP_05453366.1| hypothetical protein Bmelb3E_07163 [Brucella melitensis bv. 3
          str. Ether]
 gi|256258507|ref|ZP_05464043.1| hypothetical protein Babob9C_14402 [Brucella abortus bv. 9 str.
          C68]
 gi|256262969|ref|ZP_05465501.1| ribosomal protein L35 [Brucella melitensis bv. 2 str. 63/9]
 gi|256370517|ref|YP_003108028.1| 50S ribosomal protein L35 [Brucella microti CCM 4915]
 gi|260546223|ref|ZP_05821963.1| 50S ribosomal protein L35 [Brucella abortus NCTC 8038]
 gi|260563023|ref|ZP_05833509.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|260755793|ref|ZP_05868141.1| ribosomal protein L35 [Brucella abortus bv. 6 str. 870]
 gi|260759016|ref|ZP_05871364.1| ribosomal protein L35 [Brucella abortus bv. 4 str. 292]
 gi|260760741|ref|ZP_05873084.1| ribosomal protein L35 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884817|ref|ZP_05896431.1| 50S ribosomal protein L35 [Brucella abortus bv. 9 str. C68]
 gi|261215068|ref|ZP_05929349.1| ribosomal protein L35 [Brucella abortus bv. 3 str. Tulya]
 gi|261217938|ref|ZP_05932219.1| ribosomal protein L35 [Brucella ceti M13/05/1]
 gi|261314846|ref|ZP_05954043.1| ribosomal protein L35 [Brucella pinnipedialis M163/99/10]
 gi|261316595|ref|ZP_05955792.1| 50S ribosomal protein L35 [Brucella pinnipedialis B2/94]
 gi|261321212|ref|ZP_05960409.1| ribosomal protein L35 [Brucella ceti M644/93/1]
 gi|261751260|ref|ZP_05994969.1| ribosomal protein L35 [Brucella suis bv. 5 str. 513]
 gi|261755825|ref|ZP_05999534.1| 50S ribosomal protein L35 [Brucella suis bv. 3 str. 686]
 gi|265983116|ref|ZP_06095851.1| ribosomal protein L35 [Brucella sp. 83/13]
 gi|265987667|ref|ZP_06100224.1| ribosomal protein L35 [Brucella pinnipedialis M292/94/1]
 gi|265992142|ref|ZP_06104699.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993880|ref|ZP_06106437.1| 50S ribosomal protein L35 [Brucella melitensis bv. 3 str. Ether]
 gi|294851345|ref|ZP_06792018.1| 50S ribosomal protein L35 [Brucella sp. NVSL 07-0026]
 gi|306837676|ref|ZP_07470545.1| ribosomal protein L35 [Brucella sp. NF 2653]
 gi|306842768|ref|ZP_07475410.1| ribosomal protein L35 [Brucella sp. BO2]
 gi|306843538|ref|ZP_07476139.1| ribosomal protein L35 [Brucella sp. BO1]
 gi|54039201|sp|P66266|RL35_BRUSU RecName: Full=50S ribosomal protein L35
 gi|54041898|sp|P66265|RL35_BRUME RecName: Full=50S ribosomal protein L35
 gi|75505182|sp|Q57AE3|RL35_BRUAB RecName: Full=50S ribosomal protein L35
 gi|148887065|sp|Q2YQV8|RL35_BRUA2 RecName: Full=50S ribosomal protein L35
 gi|189042758|sp|B0CJL7|RL35_BRUSI RecName: Full=50S ribosomal protein L35
 gi|226713829|sp|B2S9B5|RL35_BRUA1 RecName: Full=50S ribosomal protein L35
 gi|254802437|sp|C0RG03|RL35_BRUMB RecName: Full=50S ribosomal protein L35
 gi|17984062|gb|AAL53189.1| lsu ribosomal protein l35p [Brucella melitensis bv. 1 str. 16M]
 gi|23349004|gb|AAN31009.1| ribosomal protein L35 [Brucella suis 1330]
 gi|62197091|gb|AAX75391.1| RpmI, ribosomal protein L35 [Brucella abortus bv. 1 str. 9-941]
 gi|82616971|emb|CAJ12079.1| Ribosomal protein L35 [Brucella melitensis biovar Abortus 2308]
 gi|163674858|gb|ABY38969.1| ribosomal protein L35 [Brucella suis ATCC 23445]
 gi|189020745|gb|ACD73467.1| Ribosomal protein L35 [Brucella abortus S19]
 gi|225641911|gb|ACO01825.1| ribosomal protein L35 [Brucella melitensis ATCC 23457]
 gi|256000680|gb|ACU49079.1| 50S ribosomal protein L35 [Brucella microti CCM 4915]
 gi|260096330|gb|EEW80206.1| 50S ribosomal protein L35 [Brucella abortus NCTC 8038]
 gi|260153039|gb|EEW88131.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|260669334|gb|EEX56274.1| ribosomal protein L35 [Brucella abortus bv. 4 str. 292]
 gi|260671173|gb|EEX57994.1| ribosomal protein L35 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675901|gb|EEX62722.1| ribosomal protein L35 [Brucella abortus bv. 6 str. 870]
 gi|260874345|gb|EEX81414.1| 50S ribosomal protein L35 [Brucella abortus bv. 9 str. C68]
 gi|260916675|gb|EEX83536.1| ribosomal protein L35 [Brucella abortus bv. 3 str. Tulya]
 gi|260923027|gb|EEX89595.1| ribosomal protein L35 [Brucella ceti M13/05/1]
 gi|261293902|gb|EEX97398.1| ribosomal protein L35 [Brucella ceti M644/93/1]
 gi|261295818|gb|EEX99314.1| 50S ribosomal protein L35 [Brucella pinnipedialis B2/94]
 gi|261303872|gb|EEY07369.1| ribosomal protein L35 [Brucella pinnipedialis M163/99/10]
 gi|261741013|gb|EEY28939.1| ribosomal protein L35 [Brucella suis bv. 5 str. 513]
 gi|261745578|gb|EEY33504.1| 50S ribosomal protein L35 [Brucella suis bv. 3 str. 686]
 gi|262764861|gb|EEZ10782.1| 50S ribosomal protein L35 [Brucella melitensis bv. 3 str. Ether]
 gi|263003208|gb|EEZ15501.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092843|gb|EEZ17018.1| ribosomal protein L35 [Brucella melitensis bv. 2 str. 63/9]
 gi|264659864|gb|EEZ30125.1| ribosomal protein L35 [Brucella pinnipedialis M292/94/1]
 gi|264661708|gb|EEZ31969.1| ribosomal protein L35 [Brucella sp. 83/13]
 gi|294819934|gb|EFG36933.1| 50S ribosomal protein L35 [Brucella sp. NVSL 07-0026]
 gi|306276229|gb|EFM57929.1| ribosomal protein L35 [Brucella sp. BO1]
 gi|306287112|gb|EFM58617.1| ribosomal protein L35 [Brucella sp. BO2]
 gi|306407234|gb|EFM63444.1| ribosomal protein L35 [Brucella sp. NF 2653]
 gi|326410118|gb|ADZ67183.1| Ribosomal protein L35 [Brucella melitensis M28]
          Length = 66

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|256158620|ref|ZP_05456507.1| hypothetical protein BcetM4_07126 [Brucella ceti M490/95/1]
 gi|256254028|ref|ZP_05459564.1| hypothetical protein BcetB_06968 [Brucella ceti B1/94]
 gi|260169526|ref|ZP_05756337.1| hypothetical protein BruF5_14444 [Brucella sp. F5/99]
 gi|261221167|ref|ZP_05935448.1| ribosomal protein L35 [Brucella ceti B1/94]
 gi|261759053|ref|ZP_06002762.1| ribosomal protein L35 [Brucella sp. F5/99]
 gi|265997127|ref|ZP_06109684.1| ribosomal protein L35 [Brucella ceti M490/95/1]
 gi|260919751|gb|EEX86404.1| ribosomal protein L35 [Brucella ceti B1/94]
 gi|261739037|gb|EEY27033.1| ribosomal protein L35 [Brucella sp. F5/99]
 gi|262551595|gb|EEZ07585.1| ribosomal protein L35 [Brucella ceti M490/95/1]
          Length = 66

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K++ 
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVE 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|237816464|ref|ZP_04595457.1| ribosomal protein L35 [Brucella abortus str. 2308 A]
 gi|237788531|gb|EEP62746.1| ribosomal protein L35 [Brucella abortus str. 2308 A]
          Length = 73

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 8  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 66

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 67 QFLPNGL 73


>gi|148560118|ref|YP_001259918.1| hypothetical protein BOV_2034 [Brucella ovis ATCC 25840]
 gi|148371375|gb|ABQ61354.1| conserved domain protein [Brucella ovis ATCC 25840]
          Length = 123

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 58  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 116

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 117 QFLPNGL 123


>gi|153008137|ref|YP_001369352.1| 50S ribosomal protein L35 [Ochrobactrum anthropi ATCC 49188]
 gi|166231208|sp|A6WX19|RL35_OCHA4 RecName: Full=50S ribosomal protein L35
 gi|151560025|gb|ABS13523.1| ribosomal protein L35 [Ochrobactrum anthropi ATCC 49188]
          Length = 66

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGK++A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKIKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|297247345|ref|ZP_06931063.1| 50S ribosomal protein L35 [Brucella abortus bv. 5 str. B3196]
 gi|297174514|gb|EFH33861.1| 50S ribosomal protein L35 [Brucella abortus bv. 5 str. B3196]
          Length = 96

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 31 MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 89

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 90 QFLPNGL 96


>gi|239833160|ref|ZP_04681489.1| ribosomal protein L35 [Ochrobactrum intermedium LMG 3301]
 gi|239825427|gb|EEQ96995.1| ribosomal protein L35 [Ochrobactrum intermedium LMG 3301]
          Length = 115

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGK++A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 50  MPKMKTKSAAKKRFKITGTGKIKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 108

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 109 QFLPNGL 115


>gi|225626492|ref|ZP_03784531.1| ribosomal protein L35 [Brucella ceti str. Cudo]
 gi|225618149|gb|EEH15192.1| ribosomal protein L35 [Brucella ceti str. Cudo]
          Length = 129

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K++ 
Sbjct: 64  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVE 122

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 123 QFLPNGL 129


>gi|163757702|ref|ZP_02164791.1| 50S ribosomal protein L35 [Hoeflea phototrophica DFL-43]
 gi|162285204|gb|EDQ35486.1| 50S ribosomal protein L35 [Hoeflea phototrophica DFL-43]
          Length = 66

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV++ AAGKRHGMIKRSNKFIR+ARGTMVL+  DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKSAAAGKRHGMIKRSNKFIRDARGTMVLSEPDA-KIVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 KFLPNGL 66


>gi|256060083|ref|ZP_05450265.1| hypothetical protein Bneo5_06961 [Brucella neotomae 5K33]
 gi|261324058|ref|ZP_05963255.1| 50S ribosomal protein L35 [Brucella neotomae 5K33]
 gi|261300038|gb|EEY03535.1| 50S ribosomal protein L35 [Brucella neotomae 5K33]
          Length = 66

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF  T TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFKTTGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|326539836|gb|ADZ88051.1| ribosomal protein L35 [Brucella melitensis M5-90]
          Length = 63

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 57/64 (89%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++ +L
Sbjct: 1  MKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVKQFL 59

Query: 64 PNGI 67
          PNG+
Sbjct: 60 PNGL 63


>gi|110633030|ref|YP_673238.1| 50S ribosomal protein L35P [Mesorhizobium sp. BNC1]
 gi|118573012|sp|Q11KK2|RL35_MESSB RecName: Full=50S ribosomal protein L35
 gi|110284014|gb|ABG62073.1| LSU ribosomal protein L35P [Chelativorans sp. BNC1]
          Length = 66

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S+ KKRF +TATG+V+ QAAGKRHGMIKRS KFIRNARGTMVL+  D  K+++
Sbjct: 1  MPKMKTKSAVKKRFKVTATGRVKVQAAGKRHGMIKRSKKFIRNARGTMVLSDPDT-KIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 QFMP 63


>gi|254474302|ref|ZP_05087692.1| ribosomal protein L35 [Pseudovibrio sp. JE062]
 gi|211956676|gb|EEA91886.1| ribosomal protein L35 [Pseudovibrio sp. JE062]
          Length = 65

 Score = 93.6 bits (231), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+   AGKRHGMIKR+NKFIRNARGT  L  ADA ++++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKCAQAGKRHGMIKRTNKFIRNARGTTTLCDADA-RIVK 59

Query: 61 NYLPNG 66
           YLP G
Sbjct: 60 KYLPYG 65


>gi|254451282|ref|ZP_05064719.1| ribosomal protein L35 [Octadecabacter antarcticus 238]
 gi|198265688|gb|EDY89958.1| ribosomal protein L35 [Octadecabacter antarcticus 238]
          Length = 66

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 56/64 (87%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRFS+TATGKV+   AGK+HGMIKRSNKF+RNARGT +L++ DA K+I+
Sbjct: 1  MPKMKTKSSCKKRFSMTATGKVKGSQAGKQHGMIKRSNKFLRNARGTTLLSAPDA-KIIK 59

Query: 61 NYLP 64
          +++P
Sbjct: 60 SFMP 63


>gi|221638164|ref|YP_002524426.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides KD131]
 gi|221158945|gb|ACL99924.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides KD131]
          Length = 68

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADA K+++
Sbjct: 3  MPKMKTKSAAKKRFSFTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADA-KIVK 61

Query: 61 NYLP 64
           Y+P
Sbjct: 62 KYMP 65


>gi|77462309|ref|YP_351813.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides 2.4.1]
 gi|126461185|ref|YP_001042299.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides ATCC 17029]
 gi|146278521|ref|YP_001168680.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides ATCC 17025]
 gi|332560191|ref|ZP_08414513.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides WS8N]
 gi|148887105|sp|Q3J5M2|RL35_RHOS4 RecName: Full=50S ribosomal protein L35
 gi|166199825|sp|A3PGR1|RL35_RHOS1 RecName: Full=50S ribosomal protein L35
 gi|166199826|sp|A4WVG1|RL35_RHOS5 RecName: Full=50S ribosomal protein L35
 gi|77386727|gb|ABA77912.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides 2.4.1]
 gi|126102849|gb|ABN75527.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides ATCC 17029]
 gi|145556762|gb|ABP71375.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides ATCC 17025]
 gi|332277903|gb|EGJ23218.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides WS8N]
          Length = 66

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFSFTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|119385006|ref|YP_916062.1| 50S ribosomal protein L35 [Paracoccus denitrificans PD1222]
 gi|166199813|sp|A1B4C2|RL35_PARDP RecName: Full=50S ribosomal protein L35
 gi|119374773|gb|ABL70366.1| LSU ribosomal protein L35P [Paracoccus denitrificans PD1222]
          Length = 66

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS+TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFSMTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|159042786|ref|YP_001531580.1| 50S ribosomal protein L35 [Dinoroseobacter shibae DFL 12]
 gi|189042767|sp|A8LLG9|RL35_DINSH RecName: Full=50S ribosomal protein L35
 gi|157910546|gb|ABV91979.1| 50S ribosomal protein L35 [Dinoroseobacter shibae DFL 12]
          Length = 66

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKVRA  AGKRHGMIKR+ KFIR ARGT +L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKMTATGKVRAGQAGKRHGMIKRTTKFIRTARGTTILSAPDA-KIVK 59

Query: 61 NYLP 64
          +Y+P
Sbjct: 60 SYMP 63


>gi|161620030|ref|YP_001593917.1| 50S ribosomal protein L35 [Brucella canis ATCC 23365]
 gi|189042757|sp|A9M9V1|RL35_BRUC2 RecName: Full=50S ribosomal protein L35
 gi|161336841|gb|ABX63146.1| ribosomal protein L35 [Brucella canis ATCC 23365]
          Length = 66

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT +++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 1  MPKMKTKTAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|260567410|ref|ZP_05837880.1| predicted protein [Brucella suis bv. 4 str. 40]
 gi|260156928|gb|EEW92008.1| predicted protein [Brucella suis bv. 4 str. 40]
          Length = 123

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT +++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 58  MPKMKTKTAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 116

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 117 QFLPNGL 123


>gi|118591291|ref|ZP_01548689.1| 50S ribosomal protein L35 [Stappia aggregata IAM 12614]
 gi|118435963|gb|EAV42606.1| 50S ribosomal protein L35 [Stappia aggregata IAM 12614]
          Length = 65

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+A  AGKRHGMIKR+NKFIR+ARGT  L+  DA K+++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKAAQAGKRHGMIKRTNKFIRDARGTTTLSDQDA-KIVK 59

Query: 61 NYLP 64
           +LP
Sbjct: 60 QFLP 63


>gi|254505188|ref|ZP_05117339.1| ribosomal protein L35 [Labrenzia alexandrii DFL-11]
 gi|222441259|gb|EEE47938.1| ribosomal protein L35 [Labrenzia alexandrii DFL-11]
          Length = 79

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA GKV+   AGKRHGMIKRSNKFIRNARGT  L+  DA KV++
Sbjct: 15 MPKLKTKSGAKKRFKVTAGGKVKCAQAGKRHGMIKRSNKFIRNARGTTTLSDQDA-KVVK 73

Query: 61 NYLP 64
           +LP
Sbjct: 74 QFLP 77


>gi|56698716|ref|YP_168794.1| 50S ribosomal protein L35 [Ruegeria pomeroyi DSS-3]
 gi|81676065|sp|Q5LMG4|RL35_SILPO RecName: Full=50S ribosomal protein L35
 gi|56680453|gb|AAV97119.1| ribosomal protein L35 [Ruegeria pomeroyi DSS-3]
          Length = 66

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|163732660|ref|ZP_02140105.1| ribosomal protein L35 [Roseobacter litoralis Och 149]
 gi|161394020|gb|EDQ18344.1| ribosomal protein L35 [Roseobacter litoralis Och 149]
          Length = 66

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV    AGKRHGMIKRS KFIR+ARGT VL+  DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVIGGQAGKRHGMIKRSKKFIRDARGTTVLSEPDA-KIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|260432656|ref|ZP_05786627.1| ribosomal protein L35 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416484|gb|EEX09743.1| ribosomal protein L35 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 66

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRTKKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|328541819|ref|YP_004301928.1| 50S ribosomal protein L35 [polymorphum gilvum SL003B-26A1]
 gi|326411571|gb|ADZ68634.1| 50S ribosomal protein L35 [Polymorphum gilvum SL003B-26A1]
          Length = 65

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+   AGKRHGMIKR+ KF+RNARGT  LA  DA K+++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKTGQAGKRHGMIKRTAKFVRNARGTTTLADQDA-KIVK 59

Query: 61 NYLPNG 66
           +LP G
Sbjct: 60 QFLPYG 65


>gi|260427167|ref|ZP_05781146.1| ribosomal protein L35 [Citreicella sp. SE45]
 gi|260421659|gb|EEX14910.1| ribosomal protein L35 [Citreicella sp. SE45]
          Length = 66

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|114769956|ref|ZP_01447566.1| 50S ribosomal protein L35 [alpha proteobacterium HTCC2255]
 gi|114549661|gb|EAU52543.1| 50S ribosomal protein L35 [alpha proteobacterium HTCC2255]
          Length = 66

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +TA+GKV++  AGKRHGMIKRSNKF+RNARGT  L++ADA  +++
Sbjct: 1  MPKMKTKSGAKKRFKMTASGKVKSGQAGKRHGMIKRSNKFLRNARGTTTLSAADA-TIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|89052941|ref|YP_508392.1| 50S ribosomal protein L35 [Jannaschia sp. CCS1]
 gi|148887077|sp|Q28V95|RL35_JANSC RecName: Full=50S ribosomal protein L35
 gi|88862490|gb|ABD53367.1| LSU ribosomal protein L35P [Jannaschia sp. CCS1]
          Length = 66

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T+TGKV A  AGK+HGMIKRSNKF+RNARGT  L++ D+ K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTSTGKVMAAQAGKQHGMIKRSNKFLRNARGTSELSAPDS-KIVK 59

Query: 61 NYLP 64
          +Y+P
Sbjct: 60 SYMP 63


>gi|260576213|ref|ZP_05844205.1| ribosomal protein L35 [Rhodobacter sp. SW2]
 gi|259021481|gb|EEW24785.1| ribosomal protein L35 [Rhodobacter sp. SW2]
          Length = 66

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATG+V+A  AGKRHGMIKR+ KFIR+  GTM+L+ +DA K+++
Sbjct: 1  MPKMKTKSAAKKRFSFTATGRVKAGPAGKRHGMIKRTTKFIRDVTGTMILSPSDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|254467121|ref|ZP_05080532.1| ribosomal protein L35 [Rhodobacterales bacterium Y4I]
 gi|206688029|gb|EDZ48511.1| ribosomal protein L35 [Rhodobacterales bacterium Y4I]
          Length = 66

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT VL++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIAGQAGKRHGMIKRTKKFIRDARGTTVLSAPDA-KIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|310814727|ref|YP_003962691.1| 50S ribosomal protein L35 [Ketogulonicigenium vulgare Y25]
 gi|308753462|gb|ADO41391.1| 50S ribosomal protein L35 [Ketogulonicigenium vulgare Y25]
          Length = 65

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +TA G+V A  AGKRHGMIKR+NKFIR+ARGT +L++AD +K+++
Sbjct: 1  MPKMKTKSAAKKRFKVTANGRVVAGQAGKRHGMIKRTNKFIRDARGTTILSAAD-EKIVK 59

Query: 61 NYLP 64
           YLP
Sbjct: 60 LYLP 63


>gi|149913186|ref|ZP_01901720.1| ribosomal protein L35 [Roseobacter sp. AzwK-3b]
 gi|149813592|gb|EDM73418.1| ribosomal protein L35 [Roseobacter sp. AzwK-3b]
          Length = 66

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATGK++   AGKRHGMIKR+ KFIR+ARGT V++ ADA K++R
Sbjct: 1  MPKMKTKSSCKKRFKVTATGKIKTAQAGKRHGMIKRTKKFIRDARGTTVMSEADA-KIVR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|307943571|ref|ZP_07658915.1| ribosomal protein L35 [Roseibium sp. TrichSKD4]
 gi|307773201|gb|EFO32418.1| ribosomal protein L35 [Roseibium sp. TrichSKD4]
          Length = 65

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA+GKV+   AGKRHGMIKR+NKFIRNARGT  L+  DA K+++
Sbjct: 1  MPKLKTKSGAKKRFKVTASGKVKTAQAGKRHGMIKRTNKFIRNARGTTTLSDQDA-KIVK 59

Query: 61 NYLP 64
           +LP
Sbjct: 60 QFLP 63


>gi|294678671|ref|YP_003579286.1| 50S ribosomal protein L35 [Rhodobacter capsulatus SB 1003]
 gi|294477491|gb|ADE86879.1| 50S ribosomal protein L35 [Rhodobacter capsulatus SB 1003]
          Length = 66

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF  TATGKV A  AGKRHGMIKRS KFIR++ GTM+L+ ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFKFTATGKVIAGPAGKRHGMIKRSTKFIRDSAGTMILSDADA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|126738877|ref|ZP_01754573.1| ribosomal protein L35 [Roseobacter sp. SK209-2-6]
 gi|126720058|gb|EBA16765.1| ribosomal protein L35 [Roseobacter sp. SK209-2-6]
          Length = 66

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGK+HGMIKR+ KFIRNARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAAQAGKQHGMIKRTKKFIRNARGTSELSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|86140202|ref|ZP_01058764.1| ribosomal protein L35 [Roseobacter sp. MED193]
 gi|85823139|gb|EAQ43352.1| ribosomal protein L35 [Roseobacter sp. MED193]
          Length = 66

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGK+HGMIKR+ KFIRNARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAAQAGKQHGMIKRTKKFIRNARGTSELSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|304394037|ref|ZP_07375960.1| ribosomal protein L35 [Ahrensia sp. R2A130]
 gi|303293477|gb|EFL87854.1| ribosomal protein L35 [Ahrensia sp. R2A130]
          Length = 67

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+GK++   AGK+HGMIKRSNKF+RNARGTMVL+  D  ++++
Sbjct: 1  MPKMKTKSSVKKRFKVTASGKLKVGQAGKQHGMIKRSNKFLRNARGTMVLSEPDT-RIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 KFMP 63


>gi|110678353|ref|YP_681360.1| 50S ribosomal protein L35 [Roseobacter denitrificans OCh 114]
 gi|118573020|sp|Q16BG9|RL35_ROSDO RecName: Full=50S ribosomal protein L35
 gi|109454469|gb|ABG30674.1| ribosomal protein L35 [Roseobacter denitrificans OCh 114]
          Length = 66

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV    AGKRHGMIKR+ KFIR+ARGT VL+  DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDA-KIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|114767103|ref|ZP_01445986.1| 50S ribosomal protein L35 [Pelagibaca bermudensis HTCC2601]
 gi|114540756|gb|EAU43822.1| 50S ribosomal protein L35 [Roseovarius sp. HTCC2601]
          Length = 66

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTGTGKVVAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|255261976|ref|ZP_05341318.1| ribosomal protein L35 [Thalassiobium sp. R2A62]
 gi|255104311|gb|EET46985.1| ribosomal protein L35 [Thalassiobium sp. R2A62]
          Length = 66

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+V+A  AGKRHGMIKR+NKF+RNARGT +L+  DA K+++
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRVKAGQAGKRHGMIKRTNKFLRNARGTTLLSEPDA-KIVK 59

Query: 61 NYLP 64
          + +P
Sbjct: 60 SMMP 63


>gi|182679947|ref|YP_001834093.1| 50S ribosomal protein L35 [Beijerinckia indica subsp. indica ATCC
          9039]
 gi|226713822|sp|B2IBH8|RL35_BEII9 RecName: Full=50S ribosomal protein L35
 gi|182635830|gb|ACB96604.1| ribosomal protein L35 [Beijerinckia indica subsp. indica ATCC
          9039]
          Length = 66

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATGKV    +GKRHGMIKR+NK IRN RGT V+  +D  K+IR
Sbjct: 1  MPKLKTKSGAKKRFKITATGKVIYAQSGKRHGMIKRTNKQIRNLRGTNVMFKSDGDKIIR 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 FFLPNG 66


>gi|163738457|ref|ZP_02145872.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis BS107]
 gi|163742133|ref|ZP_02149521.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis 2.10]
 gi|161384463|gb|EDQ08844.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis 2.10]
 gi|161388378|gb|EDQ12732.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis BS107]
          Length = 66

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRTRKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|163744829|ref|ZP_02152189.1| 50S ribosomal protein L35 [Oceanibulbus indolifex HEL-45]
 gi|161381647|gb|EDQ06056.1| 50S ribosomal protein L35 [Oceanibulbus indolifex HEL-45]
          Length = 66

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV    AGK+HGMIKR+NKFIRNARGT  L+  DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIGSQAGKQHGMIKRTNKFIRNARGTTTLSEPDA-KIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|154250674|ref|YP_001411498.1| 50S ribosomal protein L35 [Parvibaculum lavamentivorans DS-1]
 gi|171769418|sp|A7HPK8|RL35_PARL1 RecName: Full=50S ribosomal protein L35
 gi|154154624|gb|ABS61841.1| ribosomal protein L35 [Parvibaculum lavamentivorans DS-1]
          Length = 66

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA+GKV+    GKRHGMIKR+NK IRN RGT ++A ADA +VI+
Sbjct: 1  MPKLKTKSGTKKRFKLTASGKVKRGQTGKRHGMIKRTNKQIRNKRGTTIMADADAARVIK 60

Query: 61 NYLP 64
          N++P
Sbjct: 61 NFMP 64


>gi|254487997|ref|ZP_05101202.1| ribosomal protein L35 [Roseobacter sp. GAI101]
 gi|214044866|gb|EEB85504.1| ribosomal protein L35 [Roseobacter sp. GAI101]
          Length = 66

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV    AGK+HGMIKRSNKF+RNARGT  L++ DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIGSQAGKQHGMIKRSNKFLRNARGTTALSAPDA-KIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|89069713|ref|ZP_01157049.1| 50S ribosomal protein L35 [Oceanicola granulosus HTCC2516]
 gi|89044659|gb|EAR50770.1| 50S ribosomal protein L35 [Oceanicola granulosus HTCC2516]
          Length = 66

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA G+++A  AGKRHGMIKRSNKFIR+ARGT VL+ AD +++I+
Sbjct: 1  MPKMKTKSSCKKRFKVTANGRIKAGQAGKRHGMIKRSNKFIRDARGTTVLSKAD-EQIIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|90420460|ref|ZP_01228367.1| ribosomal protein L35 [Aurantimonas manganoxydans SI85-9A1]
 gi|90335188|gb|EAS48941.1| ribosomal protein L35 [Aurantimonas manganoxydans SI85-9A1]
          Length = 66

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT +S+KKRF +TA G+V+A AAGKRHGMIKRSN F+R+ARGTM+L+  D +++++
Sbjct: 1  MPKMKTKASAKKRFRMTANGRVKAGAAGKRHGMIKRSNDFLRDARGTMILSKPD-ERIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 IYMP 63


>gi|99082354|ref|YP_614508.1| 50S ribosomal protein L35 [Ruegeria sp. TM1040]
 gi|259418161|ref|ZP_05742080.1| ribosomal protein L35 [Silicibacter sp. TrichCH4B]
 gi|124079032|sp|Q1GDM0|RL35_SILST RecName: Full=50S ribosomal protein L35
 gi|99038634|gb|ABF65246.1| LSU ribosomal protein L35P [Ruegeria sp. TM1040]
 gi|259347067|gb|EEW58881.1| ribosomal protein L35 [Silicibacter sp. TrichCH4B]
          Length = 66

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|254475926|ref|ZP_05089312.1| ribosomal protein L35 [Ruegeria sp. R11]
 gi|214030169|gb|EEB71004.1| ribosomal protein L35 [Ruegeria sp. R11]
          Length = 66

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|154245877|ref|YP_001416835.1| ribosomal protein L35 [Xanthobacter autotrophicus Py2]
 gi|154159962|gb|ABS67178.1| ribosomal protein L35 [Xanthobacter autotrophicus Py2]
          Length = 403

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 50/66 (75%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+N  IRN RGT +LA  D + + +
Sbjct: 338 MPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRK 397

Query: 61  NYLPNG 66
           ++LPNG
Sbjct: 398 SFLPNG 403


>gi|114706184|ref|ZP_01439087.1| 50S ribosomal protein L35 [Fulvimarina pelagi HTCC2506]
 gi|114539030|gb|EAU42151.1| 50S ribosomal protein L35 [Fulvimarina pelagi HTCC2506]
          Length = 66

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRFS+TATG+V+A  AGKRHGMIKRSN FIR+ARG+ +L+  D +++++
Sbjct: 1  MPKMKTKSSAKKRFSMTATGRVKAGHAGKRHGMIKRSNDFIRDARGSKLLSKPD-ERIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 LYMP 63


>gi|158426071|ref|YP_001527363.1| ribosomal protein L35 [Azorhizobium caulinodans ORS 571]
 gi|172047849|sp|A8HWM0|RL35_AZOC5 RecName: Full=50S ribosomal protein L35
 gi|158332960|dbj|BAF90445.1| ribosomal protein L35 [Azorhizobium caulinodans ORS 571]
          Length = 66

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+NK IRN RGT +L  +D + + +
Sbjct: 1  MPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNKTIRNQRGTNILCESDGRIIRK 60

Query: 61 NYLPNG 66
          ++LPNG
Sbjct: 61 SFLPNG 66


>gi|126728339|ref|ZP_01744155.1| 50S ribosomal protein L35 [Sagittula stellata E-37]
 gi|126711304|gb|EBA10354.1| 50S ribosomal protein L35 [Sagittula stellata E-37]
          Length = 66

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 GYMP 63


>gi|126733940|ref|ZP_01749687.1| 50S ribosomal protein L35 [Roseobacter sp. CCS2]
 gi|126716806|gb|EBA13670.1| 50S ribosomal protein L35 [Roseobacter sp. CCS2]
          Length = 66

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATG+V A  AGKRHGMIKRSNKF+RNARGT  L+ AD + +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTATGRVLAGQAGKRHGMIKRSNKFLRNARGTTTLSKAD-EGIIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|84500416|ref|ZP_00998665.1| ribosomal protein L35 [Oceanicola batsensis HTCC2597]
 gi|84391369|gb|EAQ03701.1| ribosomal protein L35 [Oceanicola batsensis HTCC2597]
          Length = 66

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF I+A GKV A  AGKRHGMIKR+NKFIR+ARGT  L+  DA K+I+
Sbjct: 1  MPKMKTKSSCKKRFKISAKGKVIAAQAGKRHGMIKRTNKFIRDARGTTTLSEPDA-KIIK 59

Query: 61 NYLP 64
          + +P
Sbjct: 60 SMMP 63


>gi|217977995|ref|YP_002362142.1| 50S ribosomal protein L35 [Methylocella silvestris BL2]
 gi|254802460|sp|B8ELZ9|RL35_METSB RecName: Full=50S ribosomal protein L35
 gi|217503371|gb|ACK50780.1| ribosomal protein L35 [Methylocella silvestris BL2]
          Length = 66

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 49/66 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+NK IRN RGT V+  +D   +I+
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVLYAQAGKRHGMIKRTNKQIRNLRGTSVMFKSDGDNIIK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|85706244|ref|ZP_01037339.1| ribosomal protein L35 [Roseovarius sp. 217]
 gi|149201233|ref|ZP_01878208.1| 50S ribosomal protein L35 [Roseovarius sp. TM1035]
 gi|85669408|gb|EAQ24274.1| ribosomal protein L35 [Roseovarius sp. 217]
 gi|149145566|gb|EDM33592.1| 50S ribosomal protein L35 [Roseovarius sp. TM1035]
          Length = 66

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+V A  AGKRHGMIKRSNKF+RNARGT  L+ AD + +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRVVAAQAGKRHGMIKRSNKFLRNARGTTTLSKAD-EGIIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|83949945|ref|ZP_00958678.1| 50S ribosomal protein L35 [Roseovarius nubinhibens ISM]
 gi|83837844|gb|EAP77140.1| 50S ribosomal protein L35 [Roseovarius nubinhibens ISM]
          Length = 66

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+++A  AGKRHGMIKRS KFIR+ARGT  L+ AD +++I+
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRIKAGQAGKRHGMIKRSTKFIRDARGTTTLSKAD-EQIIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|83944290|ref|ZP_00956745.1| ribosomal protein L35 [Sulfitobacter sp. EE-36]
 gi|83953331|ref|ZP_00962053.1| ribosomal protein L35 [Sulfitobacter sp. NAS-14.1]
 gi|83842299|gb|EAP81467.1| ribosomal protein L35 [Sulfitobacter sp. NAS-14.1]
 gi|83844834|gb|EAP82716.1| ribosomal protein L35 [Sulfitobacter sp. EE-36]
          Length = 66

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF I+ATGKV    AGK+HGMIKR+ KFIR+ARGT  L++ DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKISATGKVIGGQAGKQHGMIKRTKKFIRDARGTTALSAPDA-KIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 GFMP 63


>gi|114568682|ref|YP_755362.1| 50S ribosomal protein L35P [Maricaulis maris MCS10]
 gi|122316993|sp|Q0ATG3|RL35_MARMM RecName: Full=50S ribosomal protein L35
 gi|114339144|gb|ABI64424.1| LSU ribosomal protein L35P [Maricaulis maris MCS10]
          Length = 66

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT S +KKRF +TA+GKV+A  AGKRHGMIKR+ K IRN RG + L+  DA K+++
Sbjct: 1  MSKMKTKSGAKKRFKLTASGKVKAGQAGKRHGMIKRTPKQIRNKRGQVTLSPQDA-KIVK 59

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 60 KYLPNGL 66


>gi|84514589|ref|ZP_01001953.1| ribosomal protein L35 [Loktanella vestfoldensis SKA53]
 gi|84511640|gb|EAQ08093.1| ribosomal protein L35 [Loktanella vestfoldensis SKA53]
          Length = 66

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATG++ A  AGKRHGMIKRSNKF+RNARGT  L+  D + +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTATGRILAGQAGKRHGMIKRSNKFLRNARGTTTLSKQD-EGIIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 PMMP 63


>gi|126725096|ref|ZP_01740939.1| 50S ribosomal protein L35 [Rhodobacterales bacterium HTCC2150]
 gi|126706260|gb|EBA05350.1| 50S ribosomal protein L35 [Rhodobacterales bacterium HTCC2150]
          Length = 66

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TA G ++A  AGKRHGMIKRS KFIR ARGT +L+  DA  +++
Sbjct: 1  MPKMKTKSSAKKRFKVTANGHIKAGHAGKRHGMIKRSTKFIRTARGTRLLSKPDA-AIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|84684100|ref|ZP_01012002.1| ribosomal protein L35 [Maritimibacter alkaliphilus HTCC2654]
 gi|84667853|gb|EAQ14321.1| ribosomal protein L35 [Rhodobacterales bacterium HTCC2654]
          Length = 66

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ++ATGKV +  AGKRHGMIKR  KFIR+ARGT V+++ DA K+++
Sbjct: 1  MPKMKTKSSCKKRFKVSATGKVISGQAGKRHGMIKRHKKFIRDARGTTVMSAPDA-KIVK 59

Query: 61 NYLP 64
          + +P
Sbjct: 60 SMMP 63


>gi|262276751|ref|ZP_06054544.1| ribosomal protein L35 [alpha proteobacterium HIMB114]
 gi|262223854|gb|EEY74313.1| ribosomal protein L35 [alpha proteobacterium HIMB114]
          Length = 68

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF ITA GKV++  AGKRHGMIKR+N  IR  RGT VL+  DA K+I+
Sbjct: 1  MAKLKTKSSAKKRFKITAKGKVKSAQAGKRHGMIKRTNSQIRKLRGTTVLSKQDA-KIIK 59

Query: 61 NYLPNGI 67
          +Y+PN +
Sbjct: 60 SYMPNSL 66


>gi|298290326|ref|YP_003692265.1| ribosomal protein L35 [Starkeya novella DSM 506]
 gi|296926837|gb|ADH87646.1| ribosomal protein L35 [Starkeya novella DSM 506]
          Length = 66

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 49/66 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF ++ TGKV    AGKRHGMIKR+NK IR+ RGT V++  DA  V +
Sbjct: 1  MPKMKTKSGAKKRFKLSGTGKVVMAQAGKRHGMIKRTNKQIRDQRGTTVMSERDAFNVRK 60

Query: 61 NYLPNG 66
           YLPNG
Sbjct: 61 FYLPNG 66


>gi|312113590|ref|YP_004011186.1| ribosomal protein L35 [Rhodomicrobium vannielii ATCC 17100]
 gi|311218719|gb|ADP70087.1| ribosomal protein L35 [Rhodomicrobium vannielii ATCC 17100]
          Length = 67

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF IT TGKV A  AGKRHGMIKR+ KFIRN+RG++VL   DA  V +
Sbjct: 1  MPKMKTKSGVKKRFKITGTGKVLAGQAGKRHGMIKRTPKFIRNSRGSVVLEPGDANHV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|300021911|ref|YP_003754522.1| ribosomal protein L35 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523732|gb|ADJ22201.1| ribosomal protein L35 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 66

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+ KFI+ ARGT VL  +DA K+++
Sbjct: 1  MPKMKTKSGAKKRFKMTGTGKVVAAQAGKRHGMIKRTAKFIQKARGTGVLNDSDA-KIVK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|330813584|ref|YP_004357823.1| LSU ribosomal protein L35p [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486679|gb|AEA81084.1| LSU ribosomal protein L35p [Candidatus Pelagibacter sp. IMCC9063]
          Length = 68

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF  TATGKV+A  AGKRHGMIKR+N  IR  RGT VL+  DA K+I+
Sbjct: 1  MAKLKTKSSAKKRFKFTATGKVKAPQAGKRHGMIKRTNAQIRKLRGTTVLSKQDA-KIIK 59

Query: 61 NYLPNGI 67
          +++P G+
Sbjct: 60 SFMPYGV 66


>gi|163851054|ref|YP_001639097.1| 50S ribosomal protein L35 [Methylobacterium extorquens PA1]
 gi|218529884|ref|YP_002420700.1| 50S ribosomal protein L35 [Methylobacterium chloromethanicum CM4]
 gi|240138188|ref|YP_002962660.1| 50S ribosomal protein L35 [Methylobacterium extorquens AM1]
 gi|254560748|ref|YP_003067843.1| 50S ribosomal protein L35 [Methylobacterium extorquens DM4]
 gi|226725031|sp|A9W370|RL35_METEP RecName: Full=50S ribosomal protein L35
 gi|254802458|sp|B7KVA1|RL35_METC4 RecName: Full=50S ribosomal protein L35
 gi|163662659|gb|ABY30026.1| ribosomal protein L35 [Methylobacterium extorquens PA1]
 gi|218522187|gb|ACK82772.1| ribosomal protein L35 [Methylobacterium chloromethanicum CM4]
 gi|240008157|gb|ACS39383.1| 50S ribosomal protein L35 [Methylobacterium extorquens AM1]
 gi|254268026|emb|CAX23897.1| 50S ribosomal protein L35 [Methylobacterium extorquens DM4]
          Length = 67

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+NK IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVMYAQAGKRHGMIKRTNKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|170743418|ref|YP_001772073.1| 50S ribosomal protein L35 [Methylobacterium sp. 4-46]
 gi|220925397|ref|YP_002500699.1| 50S ribosomal protein L35 [Methylobacterium nodulans ORS 2060]
 gi|226725034|sp|B0UPJ7|RL35_METS4 RecName: Full=50S ribosomal protein L35
 gi|254802459|sp|B8IP78|RL35_METNO RecName: Full=50S ribosomal protein L35
 gi|168197692|gb|ACA19639.1| ribosomal protein L35 [Methylobacterium sp. 4-46]
 gi|219950004|gb|ACL60396.1| ribosomal protein L35 [Methylobacterium nodulans ORS 2060]
          Length = 66

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+ K IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVLYAQAGKRHGMIKRTTKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 FFLPNG 66


>gi|295690592|ref|YP_003594285.1| 50S 50S ribosomal protein L35 [Caulobacter segnis ATCC 21756]
 gi|295432495|gb|ADG11667.1| ribosomal protein L35 [Caulobacter segnis ATCC 21756]
          Length = 66

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADA K+IR
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKLKAGVAGKRHRLIGHNGKYIRQQRGTKVMSEADA-KIIR 59

Query: 61 NYLPNGI 67
           YLP G+
Sbjct: 60 TYLPYGL 66


>gi|23007891|ref|ZP_00049567.1| COG0291: Ribosomal protein L35 [Magnetospirillum magnetotacticum
          MS-1]
 gi|188580863|ref|YP_001924308.1| 50S ribosomal protein L35 [Methylobacterium populi BJ001]
 gi|226725032|sp|B1ZGB5|RL35_METPB RecName: Full=50S ribosomal protein L35
 gi|179344361|gb|ACB79773.1| ribosomal protein L35 [Methylobacterium populi BJ001]
          Length = 67

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV    AGKRHGMIKR+NK IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVYAQAGKRHGMIKRTNKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|296446655|ref|ZP_06888596.1| ribosomal protein L35 [Methylosinus trichosporium OB3b]
 gi|296255883|gb|EFH02969.1| ribosomal protein L35 [Methylosinus trichosporium OB3b]
          Length = 66

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV     GKRHGMIKR+NK IRN RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVVYAQKGKRHGMIKRTNKQIRNLRGTSVLFKTDGDNIKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|323138786|ref|ZP_08073850.1| ribosomal protein L35 [Methylocystis sp. ATCC 49242]
 gi|322395934|gb|EFX98471.1| ribosomal protein L35 [Methylocystis sp. ATCC 49242]
          Length = 66

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV     GKRHGMIKR+NK IRN RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVVYAQQGKRHGMIKRTNKQIRNLRGTNVLFKTDGDNIKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|209965597|ref|YP_002298512.1| ribosomal protein L35 [Rhodospirillum centenum SW]
 gi|226725056|sp|B6IPJ7|RL35_RHOCS RecName: Full=50S ribosomal protein L35
 gi|209959063|gb|ACI99699.1| ribosomal protein L35 [Rhodospirillum centenum SW]
          Length = 66

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +S SKKRF  TA+G V+AQAAGKRHGM KR  K  RNARGT V+  AD +K+  
Sbjct: 1  MPKLKNHSGSKKRFKFTASGLVKAQAAGKRHGMSKRPQKMKRNARGTFVMFKADGEKIAE 60

Query: 61 NYL 63
          N+L
Sbjct: 61 NFL 63


>gi|16125298|ref|NP_419862.1| 50S ribosomal protein L35 [Caulobacter crescentus CB15]
 gi|221234035|ref|YP_002516471.1| 50S ribosomal protein L35 [Caulobacter crescentus NA1000]
 gi|20139680|sp|Q9A9E2|RL35_CAUCR RecName: Full=50S ribosomal protein L35
 gi|254802441|sp|B8H309|RL35_CAUCN RecName: Full=50S ribosomal protein L35
 gi|13422342|gb|AAK23030.1| ribosomal protein L35 [Caulobacter crescentus CB15]
 gi|220963207|gb|ACL94563.1| LSU ribosomal protein L35P [Caulobacter crescentus NA1000]
          Length = 66

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADA K+IR
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKLKAGVAGKRHRLIGHNGKYIRQNRGTKVMSEADA-KIIR 59

Query: 61 NYLPNGI 67
           YLP G+
Sbjct: 60 TYLPYGL 66


>gi|254511131|ref|ZP_05123198.1| ribosomal protein L35 [Rhodobacteraceae bacterium KLH11]
 gi|221534842|gb|EEE37830.1| ribosomal protein L35 [Rhodobacteraceae bacterium KLH11]
          Length = 63

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARG   L++ DA K+++ Y+
Sbjct: 1  MKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRTKKFIRDARGNTTLSAPDA-KIVKGYM 59

Query: 64 P 64
          P
Sbjct: 60 P 60


>gi|83944916|ref|ZP_00957282.1| ribosomal protein L35 [Oceanicaulis alexandrii HTCC2633]
 gi|83851698|gb|EAP89553.1| ribosomal protein L35 [Oceanicaulis alexandrii HTCC2633]
          Length = 67

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 48/64 (75%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF +TA+GKV A  AGKRHGMIKR+ K IR  RGT  LA+ DAK V R
Sbjct: 1  MSKLKTKSSAKKRFKVTASGKVLAGQAGKRHGMIKRTPKQIRQKRGTTALAAPDAKVVKR 60

Query: 61 NYLP 64
           Y+P
Sbjct: 61 TYMP 64


>gi|170749557|ref|YP_001755817.1| 50S ribosomal protein L35 [Methylobacterium radiotolerans JCM
          2831]
 gi|226725033|sp|B1M6P3|RL35_METRJ RecName: Full=50S ribosomal protein L35
 gi|170656079|gb|ACB25134.1| ribosomal protein L35 [Methylobacterium radiotolerans JCM 2831]
          Length = 67

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+ K IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVMYAQAGKRHGMIKRTTKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|144899426|emb|CAM76290.1| 50S ribosomal protein L35 [Magnetospirillum gryphiswaldense
          MSR-1]
          Length = 68

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 48/66 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +TA+GKV+A AA KRH +  + N   R ARGT +L  AD +KV +
Sbjct: 1  MPKMKTKSAAKKRFKLTASGKVKAGAANKRHCLSAKPNDMKRQARGTFILFKADGEKVKQ 60

Query: 61 NYLPNG 66
           YLPNG
Sbjct: 61 YYLPNG 66


>gi|254420332|ref|ZP_05034056.1| ribosomal protein L35 [Brevundimonas sp. BAL3]
 gi|302381455|ref|YP_003817278.1| ribosomal protein L35 [Brevundimonas subvibrioides ATCC 15264]
 gi|329891066|ref|ZP_08269409.1| ribosomal protein L35 [Brevundimonas diminuta ATCC 11568]
 gi|196186509|gb|EDX81485.1| ribosomal protein L35 [Brevundimonas sp. BAL3]
 gi|302192083|gb|ADK99654.1| ribosomal protein L35 [Brevundimonas subvibrioides ATCC 15264]
 gi|328846367|gb|EGF95931.1| ribosomal protein L35 [Brevundimonas diminuta ATCC 11568]
          Length = 65

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF  TATGKV+A  AGKRH +I  ++K+IR  RGT V+A ADAKK I+
Sbjct: 1  MPKLKTKSGAKKRFKFTATGKVKAGVAGKRHRLISHNSKYIRQNRGTSVMADADAKK-IK 59

Query: 61 NYLP 64
          +Y+P
Sbjct: 60 SYMP 63


>gi|288959442|ref|YP_003449783.1| large subunit ribosomal protein L35 [Azospirillum sp. B510]
 gi|288911750|dbj|BAI73239.1| large subunit ribosomal protein L35 [Azospirillum sp. B510]
          Length = 66

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 49/66 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKVRAQAA KRH + ++S    RNARG M L  ++A+ V++
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVRAQAAYKRHCLEQKSPNMKRNARGMMTLCDSNARTVLK 60

Query: 61 NYLPNG 66
          N+L N 
Sbjct: 61 NWLRNA 66


>gi|40062680|gb|AAR37593.1| ribosomal protein L35 [uncultured marine bacterium 314]
          Length = 68

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF +TA GK++   AGKRHGMIKR+N  IR  RGT +++  D+ K+++
Sbjct: 1  MPKLKTKSSAKKRFRLTAKGKIKMPQAGKRHGMIKRTNSQIRKQRGTTIMSKQDS-KIVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|197106436|ref|YP_002131813.1| ribosomal protein L35 [Phenylobacterium zucineum HLK1]
 gi|226725044|sp|B4R9C4|RL35_PHEZH RecName: Full=50S ribosomal protein L35
 gi|196479856|gb|ACG79384.1| ribosomal protein L35 [Phenylobacterium zucineum HLK1]
          Length = 66

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADA K+I+
Sbjct: 1  MPKLKTKSGVKKRFKMTATGKLKAGVAGKRHRLISHNGKYIRQNRGTKVMSEADA-KIIK 59

Query: 61 NYLPNGI 67
          ++LP G+
Sbjct: 60 SWLPYGL 66


>gi|75674267|ref|YP_316688.1| 50S ribosomal protein L35 [Nitrobacter winogradskyi Nb-255]
 gi|85714128|ref|ZP_01045117.1| Ribosomal protein L35 [Nitrobacter sp. Nb-311A]
 gi|148887087|sp|Q3SWK5|RL35_NITWN RecName: Full=50S ribosomal protein L35
 gi|74419137|gb|ABA03336.1| LSU ribosomal protein L35P [Nitrobacter winogradskyi Nb-255]
 gi|85699254|gb|EAQ37122.1| Ribosomal protein L35 [Nitrobacter sp. Nb-311A]
          Length = 66

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATGKV+    GKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITATGKVKHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|218514450|ref|ZP_03511290.1| 50S ribosomal protein L35 [Rhizobium etli 8C-3]
          Length = 43

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 39/42 (92%)

Query: 26 AAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPNGI 67
          AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KVI+NYLPNG+
Sbjct: 2  AAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVIKNYLPNGL 43


>gi|71083146|ref|YP_265865.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1062]
 gi|91762423|ref|ZP_01264388.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1002]
 gi|148887091|sp|Q4FNH7|RL35_PELUB RecName: Full=50S ribosomal protein L35
 gi|71062259|gb|AAZ21262.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1062]
 gi|91718225|gb|EAS84875.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1002]
          Length = 68

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF I+ATGKV    AGKRHGMIKR+N  IR  RGT  ++  D  K+++
Sbjct: 1  MPKLKTKSSAKKRFKISATGKVMMAQAGKRHGMIKRTNSQIRKLRGTTAMSKQDG-KIVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|254463310|ref|ZP_05076726.1| ribosomal protein L35 [Rhodobacterales bacterium HTCC2083]
 gi|206679899|gb|EDZ44386.1| ribosomal protein L35 [Rhodobacteraceae bacterium HTCC2083]
          Length = 63

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT SS KKRF  TA+G+V A  AGK+HGMIKR+NKF+RNARGT  L++ D +K+I++ +
Sbjct: 1  MKTKSSCKKRFKTTASGRVVAAQAGKQHGMIKRTNKFLRNARGTTTLSAPD-EKIIKSMM 59

Query: 64 P 64
          P
Sbjct: 60 P 60


>gi|90421973|ref|YP_530343.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisB18]
 gi|148887103|sp|Q21C62|RL35_RHOPB RecName: Full=50S ribosomal protein L35
 gi|90103987|gb|ABD86024.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisB18]
          Length = 66

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT +L   D + + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRILFKTDGENIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|254292433|ref|YP_003058456.1| ribosomal protein L35 [Hirschia baltica ATCC 49814]
 gi|254040964|gb|ACT57759.1| ribosomal protein L35 [Hirschia baltica ATCC 49814]
          Length = 66

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGKV++  A KRHGMIKR+ K IR  RGT V+A  +A+KV +
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKVKSGQANKRHGMIKRTPKQIRQQRGTTVMADNEARKV-K 59

Query: 61 NYLPNGI 67
           +LP G+
Sbjct: 60 AFLPYGL 66


>gi|115522526|ref|YP_779437.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisA53]
 gi|122297812|sp|Q07UC7|RL35_RHOP5 RecName: Full=50S ribosomal protein L35
 gi|115516473|gb|ABJ04457.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisA53]
          Length = 66

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVMSAHAGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|299133289|ref|ZP_07026484.1| ribosomal protein L35 [Afipia sp. 1NLS2]
 gi|298593426|gb|EFI53626.1| ribosomal protein L35 [Afipia sp. 1NLS2]
          Length = 66

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|92115708|ref|YP_575437.1| 50S ribosomal protein L35 [Nitrobacter hamburgensis X14]
 gi|124078996|sp|Q1QS20|RL35_NITHX RecName: Full=50S ribosomal protein L35
 gi|91798602|gb|ABE60977.1| LSU ribosomal protein L35P [Nitrobacter hamburgensis X14]
          Length = 66

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT +L   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRILFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|27375819|ref|NP_767348.1| 50S ribosomal protein L35 [Bradyrhizobium japonicum USDA 110]
 gi|148251834|ref|YP_001236419.1| 50S ribosomal protein L35 [Bradyrhizobium sp. BTAi1]
 gi|54036306|sp|Q89WH9|RL35_BRAJA RecName: Full=50S ribosomal protein L35
 gi|166231159|sp|A5E8L9|RL35_BRASB RecName: Full=50S ribosomal protein L35
 gi|27348957|dbj|BAC45973.1| 50S ribosomal protein L35 [Bradyrhizobium japonicum USDA 110]
 gi|146404007|gb|ABQ32513.1| LSU ribosomal protein L35P [Bradyrhizobium sp. BTAi1]
          Length = 66

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV     GKRHGMIKR+ K IR  RGT VL   D   V +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|258542126|ref|YP_003187559.1| 50S ribosomal protein L35 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633204|dbj|BAH99179.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636263|dbj|BAI02232.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639316|dbj|BAI05278.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642372|dbj|BAI08327.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645427|dbj|BAI11375.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648480|dbj|BAI14421.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651533|dbj|BAI17467.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO
          3283-01-42C]
 gi|256654524|dbj|BAI20451.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-12]
          Length = 66

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV +   GKRHG+IKR+ K  R+ARGT  +   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLSGPCGKRHGLIKRTQKMKRSARGTQTMTPQDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|254456490|ref|ZP_05069919.1| ribosomal protein L35 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083492|gb|EDZ60918.1| ribosomal protein L35 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 68

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF I+A GKV    AGKRHGMIKR+N  IR  RGT  ++  D  K+++
Sbjct: 1  MPKLKTKSSAKKRFKISAKGKVMTAQAGKRHGMIKRTNSQIRKLRGTTTMSKQDG-KIVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|86747170|ref|YP_483666.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris HaA2]
 gi|91974648|ref|YP_567307.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisB5]
 gi|123763165|sp|Q13ET3|RL35_RHOPS RecName: Full=50S ribosomal protein L35
 gi|148887102|sp|Q2J455|RL35_RHOP2 RecName: Full=50S ribosomal protein L35
 gi|86570198|gb|ABD04755.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris HaA2]
 gi|91681104|gb|ABE37406.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisB5]
          Length = 66

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT V+   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|316931435|ref|YP_004106417.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris DX-1]
 gi|315599149|gb|ADU41684.1| ribosomal protein L35 [Rhodopseudomonas palustris DX-1]
          Length = 66

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT V+   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVVSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|146337306|ref|YP_001202354.1| 50S ribosomal protein L35 [Bradyrhizobium sp. ORS278]
 gi|166231160|sp|A4YJM8|RL35_BRASO RecName: Full=50S ribosomal protein L35
 gi|146190112|emb|CAL74104.1| 50S ribosomal protein L35 [Bradyrhizobium sp. ORS278]
          Length = 66

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 43/65 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV     GKRHGMIKR+ K IR  RGT VL   D   V +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVMHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|209883595|ref|YP_002287452.1| ribosomal protein L35 [Oligotropha carboxidovorans OM5]
 gi|226725041|sp|B6JCK7|RL35_OLICO RecName: Full=50S ribosomal protein L35
 gi|209871791|gb|ACI91587.1| ribosomal protein L35 [Oligotropha carboxidovorans OM5]
          Length = 66

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT  L   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRTLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|167645157|ref|YP_001682820.1| 50S ribosomal protein L35 [Caulobacter sp. K31]
 gi|189042759|sp|B0SXZ9|RL35_CAUSK RecName: Full=50S ribosomal protein L35
 gi|167347587|gb|ABZ70322.1| ribosomal protein L35 [Caulobacter sp. K31]
          Length = 66

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATG ++A  AGKRH +I  + K+IR  RGT V++++D  K IR
Sbjct: 1  MPKLKTKSGAKKRFKITATGLLKAGVAGKRHRLIGHNGKYIRQNRGTKVMSASDT-KTIR 59

Query: 61 NYLPNGI 67
          +Y+P G+
Sbjct: 60 SYMPYGL 66


>gi|326405408|ref|YP_004285490.1| 50S ribosomal protein L35 [Acidiphilium multivorum AIU301]
 gi|325052270|dbj|BAJ82608.1| 50S ribosomal protein L35 [Acidiphilium multivorum AIU301]
          Length = 74

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RGTM L   D  K ++
Sbjct: 8  MPKMKTKSSVKKRFKITATGKVMAGHGNKRHGLINRSQKMKRTNRGTMALPEQDG-KTVK 66

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 67 QWAPYGL 73


>gi|326386437|ref|ZP_08208060.1| 50S ribosomal protein L35 [Novosphingobium nitrogenifigens DSM
          19370]
 gi|326209098|gb|EGD59892.1| 50S ribosomal protein L35 [Novosphingobium nitrogenifigens DSM
          19370]
          Length = 67

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITATGKV+   AGKRH +I  + K+IR  RGT V++ ADA +VI+
Sbjct: 1  MPKLKTKSGVKKRFKITATGKVKHGVAGKRHRLISHNAKYIRQNRGTDVISDADA-RVIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|148261904|ref|YP_001236031.1| ribosomal protein L35 [Acidiphilium cryptum JF-5]
 gi|166231146|sp|A5G2N0|RL35_ACICJ RecName: Full=50S ribosomal protein L35
 gi|146403585|gb|ABQ32112.1| LSU ribosomal protein L35P [Acidiphilium cryptum JF-5]
          Length = 67

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RGTM L   D  K ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVMAGHGNKRHGLINRSQKMKRTNRGTMALPEQDG-KTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|39933119|ref|NP_945395.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris CGA009]
 gi|192288473|ref|YP_001989078.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris TIE-1]
 gi|54036265|sp|Q6NDR5|RL35_RHOPA RecName: Full=50S ribosomal protein L35; AltName: Full=RRP-L35
 gi|226725057|sp|B3Q5X3|RL35_RHOPT RecName: Full=50S ribosomal protein L35
 gi|39652744|emb|CAE25483.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris CGA009]
 gi|192282222|gb|ACE98602.1| ribosomal protein L35 [Rhodopseudomonas palustris TIE-1]
          Length = 66

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT  +   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRAIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|58584915|ref|YP_198488.1| ribosomal protein L35 [Wolbachia endosymbiont strain TRS of
          Brugia malayi]
 gi|75507953|sp|Q5GRX8|RL35_WOLTR RecName: Full=50S ribosomal protein L35
 gi|58419231|gb|AAW71246.1| Ribosomal protein L35 [Wolbachia endosymbiont strain TRS of
          Brugia malayi]
          Length = 65

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF++TA GKV +  +GKRHGM+KRS   IRN RGT VL  +D+ ++++ Y
Sbjct: 2  KLKTKSSVKKRFNLTAKGKVISAQSGKRHGMVKRSKSNIRNQRGTTVLGKSDS-RIVKLY 60

Query: 63 LPNGI 67
          +P GI
Sbjct: 61 IPYGI 65


>gi|87198709|ref|YP_495966.1| 50S ribosomal protein L35 [Novosphingobium aromaticivorans DSM
          12444]
 gi|148887088|sp|Q2GAJ1|RL35_NOVAD RecName: Full=50S ribosomal protein L35
 gi|87134390|gb|ABD25132.1| LSU ribosomal protein L35P [Novosphingobium aromaticivorans DSM
          12444]
          Length = 67

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TA+GKV+   AGKRH +I  + K+IR  RGT V++ ADA KVI+
Sbjct: 1  MPKLKTKSGVKKRFKLTASGKVKHGVAGKRHRLISHNAKYIRQNRGTEVISDADA-KVIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|189183697|ref|YP_001937482.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Ikeda]
 gi|226725042|sp|B3CRZ1|RL35_ORITI RecName: Full=50S ribosomal protein L35
 gi|189180468|dbj|BAG40248.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Ikeda]
          Length = 68

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 48/67 (71%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS++++GK++   AGKRH M +R+ K +RN RGT  L   DAK +I+
Sbjct: 1  MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRGTTTLIGQDAKNIIK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 YLMPYGV 67


>gi|57238869|ref|YP_180005.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58578798|ref|YP_197010.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58616857|ref|YP_196056.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str. Gardel]
 gi|75507511|sp|Q5FH68|RL35_EHRRG RecName: Full=50S ribosomal protein L35
 gi|81672831|sp|Q5HC38|RL35_EHRRW RecName: Full=50S ribosomal protein L35
 gi|57160948|emb|CAH57854.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58416469|emb|CAI27582.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str. Gardel]
 gi|58417424|emb|CAI26628.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
          Length = 66

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT V+  +D+ ++I+
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTTVMNQSDS-RIIK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 LFMP 63


>gi|88657894|ref|YP_507022.1| 50S ribosomal protein L35 [Ehrlichia chaffeensis str. Arkansas]
 gi|148887073|sp|Q2GHR1|RL35_EHRCR RecName: Full=50S ribosomal protein L35
 gi|88599351|gb|ABD44820.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Arkansas]
          Length = 66

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT ++ S+D+ ++++
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNSSDS-RIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 LFMP 63


>gi|190571068|ref|YP_001975426.1| ribosomal protein L35 [Wolbachia endosymbiont of Culex
          quinquefasciatus Pel]
 gi|226725083|sp|B3CLK3|RL35_WOLPP RecName: Full=50S ribosomal protein L35
 gi|190357340|emb|CAQ54771.1| ribosomal protein L35 [Wolbachia endosymbiont of Culex
          quinquefasciatus Pel]
          Length = 68

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ Y
Sbjct: 5  KLKTKSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILNKSDS-RIVKLY 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|163793841|ref|ZP_02187815.1| Ribosomal protein L35 [alpha proteobacterium BAL199]
 gi|159180952|gb|EDP65469.1| Ribosomal protein L35 [alpha proteobacterium BAL199]
          Length = 65

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +T TGKVRA  A KRH +  +S K  R  RGTM+L  ADA  +I+
Sbjct: 1  MPKMKTKSSVKKRFRLTGTGKVRANVAYKRHQLSAKSVKMKRQNRGTMILCEADA-GIIK 59

Query: 61 NYLPNG 66
           ++P G
Sbjct: 60 QFMPYG 65


>gi|23015134|ref|ZP_00054919.1| COG0291: Ribosomal protein L35 [Magnetospirillum magnetotacticum
          MS-1]
 gi|83313483|ref|YP_423747.1| ribosomal protein L35 [Magnetospirillum magneticum AMB-1]
 gi|148887081|sp|Q2VYY7|RL35_MAGMM RecName: Full=50S ribosomal protein L35
 gi|82948324|dbj|BAE53188.1| Ribosomal protein L35 [Magnetospirillum magneticum AMB-1]
          Length = 67

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 44/66 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGKV+   A KRH +  +S K  R ARGT +L   D+  V +
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKVKGNVAFKRHCLSAKSQKMKRQARGTFMLFKTDSDNVKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|88607195|ref|YP_504694.1| 50S ribosomal protein L35 [Anaplasma phagocytophilum HZ]
 gi|148887061|sp|Q2GLQ7|RL35_ANAPZ RecName: Full=50S ribosomal protein L35
 gi|88598258|gb|ABD43728.1| ribosomal protein L35 [Anaplasma phagocytophilum HZ]
          Length = 66

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF ITA+GKV A  + KRHGM KRS + +R  RGT ++++AD  +++ 
Sbjct: 1  MPKLKTKSSAKKRFKITASGKVVAAQSTKRHGMTKRSKRSLRTRRGTALMSAADT-RIVA 59

Query: 61 NYLPNGI 67
           ++P G+
Sbjct: 60 PFMPYGL 66


>gi|148555347|ref|YP_001262929.1| 50S ribosomal protein L35 [Sphingomonas wittichii RW1]
 gi|166233038|sp|A5V925|RL35_SPHWW RecName: Full=50S ribosomal protein L35
 gi|148500537|gb|ABQ68791.1| LSU ribosomal protein L35P [Sphingomonas wittichii RW1]
          Length = 67

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGKV+   AGKRH +I  ++K+IR  RGT VLA AD  +V +
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKVKHGVAGKRHRLISHNSKYIRTNRGTTVLAEADTARV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|304320479|ref|YP_003854122.1| 50S ribosomal protein L35 [Parvularcula bermudensis HTCC2503]
 gi|303299381|gb|ADM08980.1| ribosomal protein L35 [Parvularcula bermudensis HTCC2503]
          Length = 66

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGK+ A + GKRHGMIKR+ K IR  RG   L+  D +++ +
Sbjct: 1  MPKMKTKSGAKKRFKVTGTGKIMALSTGKRHGMIKRTPKQIRQKRGMEPLSEPD-QRIAK 59

Query: 61 NYLP 64
           Y+P
Sbjct: 60 KYMP 63


>gi|15604458|ref|NP_220976.1| 50S ribosomal protein L35 [Rickettsia prowazekii str. Madrid E]
 gi|6226001|sp|Q9ZCV1|RL35_RICPR RecName: Full=50S ribosomal protein L35
 gi|3861152|emb|CAA15052.1| 50S RIBOSOMAL PROTEIN L35 (rpmI) [Rickettsia prowazekii]
 gi|292572232|gb|ADE30147.1| 50S ribosomal protein L35 [Rickettsia prowazekii Rp22]
          Length = 67

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF  TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKFTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGHNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|157826001|ref|YP_001493721.1| 50S ribosomal protein L35 [Rickettsia akari str. Hartford]
 gi|166199827|sp|A8GP88|RL35_RICAH RecName: Full=50S ribosomal protein L35
 gi|157799959|gb|ABV75213.1| 50S ribosomal protein L35 [Rickettsia akari str. Hartford]
          Length = 68

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPKDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|51473786|ref|YP_067543.1| 50S ribosomal protein L35 [Rickettsia typhi str. Wilmington]
 gi|81692288|sp|Q68WD1|RL35_RICTY RecName: Full=50S ribosomal protein L35
 gi|51460098|gb|AAU04061.1| 50S ribosomal protein L35 [Rickettsia typhi str. Wilmington]
          Length = 68

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF  TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKFTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|42520699|ref|NP_966614.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          melanogaster]
 gi|58698331|ref|ZP_00373247.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|99036097|ref|ZP_01315130.1| hypothetical protein Wendoof_01000020 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
 gi|225630567|ref|YP_002727358.1| ribosomal protein L35 [Wolbachia sp. wRi]
 gi|54036273|sp|Q73GR8|RL35_WOLPM RecName: Full=50S ribosomal protein L35
 gi|254803640|sp|C0R3S5|RL35_WOLWR RecName: Full=50S ribosomal protein L35
 gi|42410439|gb|AAS14548.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          melanogaster]
 gi|58535155|gb|EAL59238.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|225592548|gb|ACN95567.1| ribosomal protein L35 [Wolbachia sp. wRi]
          Length = 68

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ +
Sbjct: 5  KLKTKSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILGKSDS-RIVKLH 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|73666768|ref|YP_302784.1| 50S ribosomal protein L35 [Ehrlichia canis str. Jake]
 gi|148887072|sp|Q3YSW9|RL35_EHRCJ RecName: Full=50S ribosomal protein L35
 gi|72393909|gb|AAZ68186.1| LSU ribosomal protein L35P [Ehrlichia canis str. Jake]
          Length = 66

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT ++  +D+ ++++
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNPSDS-RIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 LFMP 63


>gi|148284325|ref|YP_001248415.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Boryong]
 gi|166199810|sp|A5CCZ3|RL35_ORITB RecName: Full=50S ribosomal protein L35
 gi|146739764|emb|CAM79623.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Boryong]
          Length = 68

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 47/67 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS++++GK++   AGKRH M +R+ K +RN R T  L   DAK +I+
Sbjct: 1  MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 YLMPYGV 67


>gi|330994701|ref|ZP_08318624.1| 50S ribosomal protein L35 [Gluconacetobacter sp. SXCC-1]
 gi|329758342|gb|EGG74863.1| 50S ribosomal protein L35 [Gluconacetobacter sp. SXCC-1]
          Length = 67

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+ VL   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQVLTEMDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|225629869|ref|ZP_03787775.1| ribosomal protein L35 [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
 gi|225591277|gb|EEH12411.1| ribosomal protein L35 [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
          Length = 68

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ +
Sbjct: 5  KLKTRSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILGKSDS-RIVKLH 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|239948219|ref|ZP_04699972.1| ribosomal protein L35 [Rickettsia endosymbiont of Ixodes
          scapularis]
 gi|239922495|gb|EER22519.1| ribosomal protein L35 [Rickettsia endosymbiont of Ixodes
          scapularis]
          Length = 68

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKTQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|332188392|ref|ZP_08390116.1| ribosomal protein L35 [Sphingomonas sp. S17]
 gi|332011538|gb|EGI53619.1| ribosomal protein L35 [Sphingomonas sp. S17]
          Length = 67

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGK++   AGKRH +I  + K+IR  RGT VL+ AD  K ++
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKLKHGVAGKRHRLISHNGKYIRQNRGTSVLSDADT-KTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|94497864|ref|ZP_01304430.1| ribosomal protein L35 [Sphingomonas sp. SKA58]
 gi|94422753|gb|EAT07788.1| ribosomal protein L35 [Sphingomonas sp. SKA58]
          Length = 67

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF  TATGKV+   AGKRH +I  + K+IR  RGT VL+ +DA  V R
Sbjct: 1  MPKMKTKSGVKKRFKFTATGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLSDSDAGHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|165933516|ref|YP_001650305.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. Iowa]
 gi|229586951|ref|YP_002845452.1| 50S ribosomal protein L35 [Rickettsia africae ESF-5]
 gi|165908603|gb|ABY72899.1| LSU ribosomal protein L35P [Rickettsia rickettsii str. Iowa]
 gi|228022001|gb|ACP53709.1| 50S ribosomal protein L35 [Rickettsia africae ESF-5]
          Length = 89

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 22 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 81

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 82 YFLPYGI 88


>gi|103488417|ref|YP_617978.1| 50S ribosomal protein L35 [Sphingopyxis alaskensis RB2256]
 gi|124079036|sp|Q1GNX7|RL35_SPHAL RecName: Full=50S ribosomal protein L35
 gi|98978494|gb|ABF54645.1| LSU ribosomal protein L35P [Sphingopyxis alaskensis RB2256]
          Length = 67

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  ++K+IR  RGT VL+ ADA  V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNSKYIRTNRGTSVLSEADAAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|34581433|ref|ZP_00142913.1| 50S ribosomal protein L35 [Rickettsia sibirica 246]
 gi|67458742|ref|YP_246366.1| 50S ribosomal protein L35 [Rickettsia felis URRWXCal2]
 gi|157828788|ref|YP_001495030.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. 'Sheila
          Smith']
 gi|238650658|ref|YP_002916510.1| 50S ribosomal protein L35 [Rickettsia peacockii str. Rustic]
 gi|75536801|sp|Q4UMK7|RL35_RICFE RecName: Full=50S ribosomal protein L35
 gi|166199830|sp|A8GSZ7|RL35_RICRS RecName: Full=50S ribosomal protein L35
 gi|259647362|sp|C4K1L1|RL35_RICPU RecName: Full=50S ribosomal protein L35
 gi|28262818|gb|EAA26322.1| 50S ribosomal protein L35 [Rickettsia sibirica 246]
 gi|67004275|gb|AAY61201.1| 50S ribosomal protein L35 [Rickettsia felis URRWXCal2]
 gi|157801269|gb|ABV76522.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. 'Sheila
          Smith']
 gi|238624756|gb|ACR47462.1| 50S ribosomal protein L35 [Rickettsia peacockii str. Rustic]
          Length = 68

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|157964749|ref|YP_001499573.1| 50S ribosomal protein L35 [Rickettsia massiliae MTU5]
 gi|157844525|gb|ABV85026.1| 50S ribosomal protein L35 [Rickettsia massiliae MTU5]
          Length = 92

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 25 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 84

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 85 YFLPYGI 91


>gi|149187100|ref|ZP_01865405.1| ribosomal protein L35 [Erythrobacter sp. SD-21]
 gi|148829252|gb|EDL47698.1| ribosomal protein L35 [Erythrobacter sp. SD-21]
          Length = 69

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITATGKV+   AGKRH +   + K+IR  RGT VL+ AD  K ++
Sbjct: 3  MPKLKTKSGVKKRFKITATGKVKHGVAGKRHRLSSHNAKYIRQNRGTTVLSEADW-KAVK 61

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 62 KWAPYGL 68


>gi|296284909|ref|ZP_06862907.1| 50S ribosomal protein L35 [Citromicrobium bathyomarinum JL354]
          Length = 67

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF  TATGKV+   AGKRH ++  + K+IR  RGT VL+SAD   V +
Sbjct: 1  MPKMKTKSGVKKRFKFTATGKVKHGVAGKRHRLMSHNAKYIRQNRGTDVLSSADVDHV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|294084799|ref|YP_003551559.1| hypothetical protein SAR116_1232 [Candidatus Puniceispirillum
          marinum IMCC1322]
 gi|292664374|gb|ADE39475.1| hypothetical protein SAR116_1232 [Candidatus Puniceispirillum
          marinum IMCC1322]
          Length = 65

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +TA+GKVR  AA   H + +RS K  R ARGTM+L+ ADA ++++
Sbjct: 1  MPKMKTKSGAKKRFRLTASGKVRGSAAFLSHNLRRRSQKMKRKARGTMILSDADA-RIVK 59

Query: 61 NYLP 64
           ++P
Sbjct: 60 RFIP 63


>gi|15620044|gb|AAL03472.1| 50S ribosomal protein L35 [Rickettsia conorii str. Malish 7]
          Length = 89

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 22 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDRYNIKK 81

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 82 YFLPYGI 88


>gi|289608111|emb|CBI60653.1| unnamed protein product [Sordaria macrospora]
          Length = 67

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TATGKV+   AGKRH +I  + K+IR  RGT VLA AD    I+
Sbjct: 1  MPKLKTKSGVKKRFKFTATGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLADADVAH-IK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|161723844|ref|NP_360571.2| 50S ribosomal protein L35 [Rickettsia conorii str. Malish 7]
 gi|20139546|sp|Q92H38|RL35_RICCN RecName: Full=50S ribosomal protein L35
          Length = 68

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDRYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|91205679|ref|YP_538034.1| 50S ribosomal protein L35 [Rickettsia bellii RML369-C]
 gi|157826863|ref|YP_001495927.1| 50S ribosomal protein L35 [Rickettsia bellii OSU 85-389]
 gi|148887106|sp|Q1RI69|RL35_RICBR RecName: Full=50S ribosomal protein L35
 gi|166199828|sp|A8GVL3|RL35_RICB8 RecName: Full=50S ribosomal protein L35
 gi|91069223|gb|ABE04945.1| 50S ribosomal protein L35 [Rickettsia bellii RML369-C]
 gi|157802167|gb|ABV78890.1| 50S ribosomal protein L35 [Rickettsia bellii OSU 85-389]
          Length = 68

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 44/66 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVVASQAGKKHFMRRRTKAQIRNLRGTTILCDQDGYNIKK 60

Query: 61 NYLPNG 66
           +LP G
Sbjct: 61 YFLPYG 66


>gi|162149044|ref|YP_001603505.1| 50S ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl
          5]
 gi|161787621|emb|CAP57217.1| putative 50S ribosomal protein L35 [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 69

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 3  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 61

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 62 QWAPYGL 68


>gi|162007983|ref|YP_459652.2| 50S ribosomal protein L35 [Erythrobacter litoralis HTCC2594]
          Length = 67

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D  K ++
Sbjct: 1  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSDPDT-KTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|85709660|ref|ZP_01040725.1| ribosomal protein L35 [Erythrobacter sp. NAP1]
 gi|85688370|gb|EAQ28374.1| ribosomal protein L35 [Erythrobacter sp. NAP1]
          Length = 69

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D  K ++
Sbjct: 3  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSEHDT-KTVK 61

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 62 KWAPYGL 68


>gi|209545207|ref|YP_002277436.1| 50S ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl
          5]
 gi|209532884|gb|ACI52821.1| ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 67

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|315498800|ref|YP_004087604.1| ribosomal protein l35 [Asticcacaulis excentricus CB 48]
 gi|315416812|gb|ADU13453.1| ribosomal protein L35 [Asticcacaulis excentricus CB 48]
          Length = 65

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF  TA+GKV+A  AGKRH +I  + K+IR  RGT V++ AD  K I+
Sbjct: 1  MSKLKTKSGAKKRFRFTASGKVKAGVAGKRHRLISHNGKYIRQNRGTQVMSDADTAK-IK 59

Query: 61 NYLP 64
          +Y+P
Sbjct: 60 SYMP 63


>gi|84788673|gb|ABC64855.1| ribosomal protein L35 [Erythrobacter litoralis HTCC2594]
          Length = 69

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D  K ++
Sbjct: 3  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSDPDT-KTVK 61

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 62 KWAPYGL 68


>gi|296532251|ref|ZP_06894995.1| 50S ribosomal protein L35 [Roseomonas cervicalis ATCC 49957]
 gi|296267421|gb|EFH13302.1| 50S ribosomal protein L35 [Roseomonas cervicalis ATCC 49957]
          Length = 90

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF++TATGKV+A A  KRH +  ++NK  R  RGT VL   D    ++
Sbjct: 23 MPKMKTKSSVKKRFTLTATGKVKAGAGNKRHMLTAKTNKMKRQNRGTFVLDKQDG-DTVK 81

Query: 61 NYLPNG 66
           ++P G
Sbjct: 82 QWMPYG 87


>gi|296116374|ref|ZP_06834989.1| 50S ribosomal protein L35 [Gluconacetobacter hansenii ATCC 23769]
 gi|295977074|gb|EFG83837.1| 50S ribosomal protein L35 [Gluconacetobacter hansenii ATCC 23769]
          Length = 103

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 37  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 95

Query: 61  NYLPNGI 67
            + P G+
Sbjct: 96  QWAPYGL 102


>gi|307293505|ref|ZP_07573349.1| ribosomal protein L35 [Sphingobium chlorophenolicum L-1]
 gi|306879656|gb|EFN10873.1| ribosomal protein L35 [Sphingobium chlorophenolicum L-1]
          Length = 67

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  + K+IR  RGT VL+ AD   V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLSDADVAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|58038739|ref|YP_190703.1| 50S ribosomal protein L35 [Gluconobacter oxydans 621H]
 gi|81672746|sp|Q5FU99|RL35_GLUOX RecName: Full=50S ribosomal protein L35
 gi|58001153|gb|AAW60047.1| LSU ribosomal protein L35P [Gluconobacter oxydans 621H]
          Length = 67

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV      KRHG+I R  K  R  RG   +   DA K I+
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVMCGPGNKRHGLINRPQKMKRTNRGPQTMTDMDA-KTIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|294013438|ref|YP_003546898.1| ribosomal protein L35 [Sphingobium japonicum UT26S]
 gi|292676768|dbj|BAI98286.1| ribosomal protein L35 [Sphingobium japonicum UT26S]
          Length = 67

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  + K+IR  RGT V++ AD   V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNAKYIRQNRGTSVMSDADVAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|329849636|ref|ZP_08264482.1| ribosomal protein L35 [Asticcacaulis biprosthecum C19]
 gi|328841547|gb|EGF91117.1| ribosomal protein L35 [Asticcacaulis biprosthecum C19]
          Length = 65

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF  TA+GK +A  AGKRH +I  + K+IR  RGT V++ AD  K I+
Sbjct: 1  MSKLKTKSGAKKRFRFTASGKAKAGVAGKRHRLISHNGKYIRQNRGTQVMSDADTIK-IK 59

Query: 61 NYLP 64
          +Y+P
Sbjct: 60 SYMP 63


>gi|157803531|ref|YP_001492080.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel]
 gi|166199829|sp|A8EY62|RL35_RICCK RecName: Full=50S ribosomal protein L35
 gi|157784794|gb|ABV73295.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel]
          Length = 68

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S++KKRF +TA+G V A  AGK+H M +R+   IRN RGT +L + +   + +
Sbjct: 1  MPKLKTKSAAKKRFKLTASGNVIASQAGKKHFMRRRTKAQIRNLRGTTILCNQEGYNIKK 60

Query: 61 NYLPNG 66
           +LP G
Sbjct: 61 YFLPYG 66


>gi|83594850|ref|YP_428602.1| 50S ribosomal protein L35P [Rhodospirillum rubrum ATCC 11170]
 gi|148887104|sp|Q2RNI0|RL35_RHORT RecName: Full=50S ribosomal protein L35
 gi|83577764|gb|ABC24315.1| LSU ribosomal protein L35P [Rhodospirillum rubrum ATCC 11170]
          Length = 65

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS+T TGK++ + A K H +  +  K  R ARGT +L  AD +++++
Sbjct: 1  MPKLKTKSAVKKRFSLTGTGKIKVKVAYKSHLLSNKGTKMKRQARGTFILCDAD-QRIVK 59

Query: 61 NYLPNG 66
           ++P G
Sbjct: 60 KFMPYG 65


>gi|56416406|ref|YP_153480.1| 50S ribosomal protein L35 [Anaplasma marginale str. St. Maries]
 gi|222474779|ref|YP_002563194.1| ribosomal protein L35 (rpmI) [Anaplasma marginale str. Florida]
 gi|254994637|ref|ZP_05276827.1| 50S ribosomal protein L35 [Anaplasma marginale str. Mississippi]
 gi|255002747|ref|ZP_05277711.1| 50S ribosomal protein L35 [Anaplasma marginale str. Puerto Rico]
 gi|255003879|ref|ZP_05278680.1| 50S ribosomal protein L35 [Anaplasma marginale str. Virginia]
 gi|269958285|ref|YP_003328072.1| 50S ribosomal protein L35 [Anaplasma centrale str. Israel]
 gi|81677673|sp|Q5PBV4|RL35_ANAMM RecName: Full=50S ribosomal protein L35
 gi|254802426|sp|B9KHH6|RL35_ANAMF RecName: Full=50S ribosomal protein L35
 gi|56387638|gb|AAV86225.1| ribosomal protein L35 [Anaplasma marginale str. St. Maries]
 gi|222418915|gb|ACM48938.1| ribosomal protein L35 (rpmI) [Anaplasma marginale str. Florida]
 gi|269848114|gb|ACZ48758.1| 50S ribosomal protein L35 [Anaplasma centrale str. Israel]
          Length = 66

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF +TA+G+V +  + KRHGM KRS + +R  RG   +++ DA +++ 
Sbjct: 1  MPKLKTKSSAKKRFKVTASGRVMSAQSTKRHGMTKRSKRSLRTRRGIAQMSAPDA-RIVA 59

Query: 61 NYLPNGI 67
          +++P  +
Sbjct: 60 SFMPYSL 66


>gi|114328167|ref|YP_745324.1| 50S ribosomal protein L35 [Granulibacter bethesdensis CGDNIH1]
 gi|122326874|sp|Q0BS01|RL35_GRABC RecName: Full=50S ribosomal protein L35
 gi|114316341|gb|ABI62401.1| LSU ribosomal protein L35P [Granulibacter bethesdensis CGDNIH1]
          Length = 67

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRF ITATGKV A    KRH +  RS K  R  RG+ VL  AD    ++
Sbjct: 1  MPKLKTKSSVKKRFKITATGKVLAGPGKKRHNLSARSQKAKRQNRGSQVLTHADG-LTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|42527658|ref|NP_972756.1| 50S ribosomal protein L35 [Treponema denticola ATCC 35405]
 gi|54036274|sp|Q73KR2|RL35_TREDE RecName: Full=50S ribosomal protein L35
 gi|41818486|gb|AAS12675.1| ribosomal protein L35 [Treponema denticola ATCC 35405]
          Length = 66

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  ++KKRFSITA+GKV+ +   K H M K+S K +R  + + +L+ AD+ K+ +
Sbjct: 1  MPKMKSKRAAKKRFSITASGKVKYKQMNKGHIMTKKSQKRVRRLKKSAILSEADSMKMRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|325475124|gb|EGC78310.1| 50S ribosomal protein L35 [Treponema denticola F0402]
          Length = 66

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  ++KKRFS+TA+GKV+ +   K H M K+S K +R  + + +L+ AD+ K+ +
Sbjct: 1  MPKMKSKRAAKKRFSLTASGKVKYKQMNKGHIMTKKSQKRVRRLKKSAILSEADSMKMRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|56552412|ref|YP_163251.1| 50S ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761545|ref|ZP_04759632.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ATCC
          10988]
 gi|260753910|ref|YP_003226803.1| 50S ribosomal protein L35 [Zymomonas mobilis subsp. mobilis NCIMB
          11163]
 gi|81677172|sp|Q5NMC0|RL35_ZYMMO RecName: Full=50S ribosomal protein L35
 gi|56543986|gb|AAV90140.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373853|gb|EER63386.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ATCC
          10988]
 gi|258553273|gb|ACV76219.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis NCIMB
          11163]
          Length = 67

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA GKV+   AGKRH +I  + K+IR  R T V++S +  + I+
Sbjct: 1  MPKLKTKSGVKKRFKFTANGKVKHGVAGKRHRLISHNAKYIRQHRRTDVVSSTE-NRTIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|182439699|ref|YP_001827418.1| 50S ribosomal protein L35 [Streptomyces griseus subsp. griseus
          NBRC 13350]
 gi|239940056|ref|ZP_04691993.1| 50S ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|239986545|ref|ZP_04707209.1| 50S ribosomal protein L35 [Streptomyces roseosporus NRRL 11379]
 gi|291443485|ref|ZP_06582875.1| ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|326780363|ref|ZP_08239628.1| 50S ribosomal protein L35 [Streptomyces cf. griseus XylebKG-1]
 gi|226725068|sp|B1W353|RL35_STRGG RecName: Full=50S ribosomal protein L35
 gi|62896305|emb|CAH94291.1| ribosomal protein L35 [Streptomyces griseus subsp. griseus]
 gi|178468215|dbj|BAG22735.1| putative ribosomal protein L35 [Streptomyces griseus subsp.
          griseus NBRC 13350]
 gi|291346432|gb|EFE73336.1| ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|320011786|gb|ADW06636.1| ribosomal protein L35 [Streptomyces flavogriseus ATCC 33331]
 gi|326660696|gb|EGE45542.1| 50S ribosomal protein L35 [Streptomyces cf. griseus XylebKG-1]
          Length = 64

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 42/58 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF IT +GKV  + AGKRH +  +S+K  R+  GT+V+A ADAKK+
Sbjct: 1  MPKNKTHSGASKRFKITGSGKVLRERAGKRHLLEHKSSKKTRSLTGTVVVAPADAKKI 58


>gi|317124676|ref|YP_004098788.1| 50S ribosomal protein L35P [Intrasporangium calvum DSM 43043]
 gi|315588764|gb|ADU48061.1| LSU ribosomal protein L35P [Intrasporangium calvum DSM 43043]
          Length = 64

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF IT TGKV  + AG RH +  +S+K +R+    +V+A  DAKKV
Sbjct: 1  MPKMKTHSGAKKRFRITGTGKVMREQAGGRHLLEHKSSKKMRSIANDLVVAPEDAKKV 58


>gi|282864275|ref|ZP_06273331.1| ribosomal protein L35 [Streptomyces sp. ACTE]
 gi|282560762|gb|EFB66308.1| ribosomal protein L35 [Streptomyces sp. ACTE]
          Length = 64

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF IT +GKV  + AGKRH +  +S+K  R+  GT V+A ADAKK+
Sbjct: 1  MPKNKTHSGASKRFKITGSGKVLREKAGKRHLLEHKSSKKTRSLTGTTVVAPADAKKI 58


>gi|302528047|ref|ZP_07280389.1| ribosomal protein L35 [Streptomyces sp. AA4]
 gi|302436942|gb|EFL08758.1| ribosomal protein L35 [Streptomyces sp. AA4]
          Length = 64

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR  IT +GK+R Q AG+RH M K+SN+  R   GT  +A  D  +V R
Sbjct: 1  MPKMKTHKGTSKRVRITGSGKLRRQKAGRRHLMEKKSNRLTRRLEGTTEVAQNDVSRVKR 60


>gi|254796600|ref|YP_003081436.1| hypothetical protein NRI_0206 [Neorickettsia risticii str.
          Illinois]
 gi|254589835|gb|ACT69197.1| conserved domain protein [Neorickettsia risticii str. Illinois]
          Length = 83

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G   L S    +++R
Sbjct: 18 MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGY-TLISKSKMRLMR 76

Query: 61 NYLP 64
          + +P
Sbjct: 77 SVMP 80


>gi|68171434|ref|ZP_00544824.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999154|gb|EAM85814.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 55

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 41/53 (77%), Gaps = 1/53 (1%)

Query: 12 KRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLP 64
          KRFS+TATGK+++  + KRHGM KRS + IR  RGT ++ S+D+ ++++ ++P
Sbjct: 1  KRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNSSDS-RIVKLFMP 52


>gi|88608877|ref|YP_506109.1| ribosomal protein L35 [Neorickettsia sennetsu str. Miyayama]
 gi|88601046|gb|ABD46514.1| ribosomal protein L35 [Neorickettsia sennetsu str. Miyayama]
          Length = 68

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G   L S    +++R
Sbjct: 3  MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGY-TLISKSKMRLMR 61

Query: 61 NYLP 64
          + +P
Sbjct: 62 SVMP 65


>gi|118573016|sp|Q2GEI7|RL35_NEOSM RecName: Full=50S ribosomal protein L35
          Length = 66

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G   L S    +++R
Sbjct: 1  MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGY-TLISKSKMRLMR 59

Query: 61 NYLP 64
          + +P
Sbjct: 60 SVMP 63


>gi|134101783|ref|YP_001107444.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
 gi|291009828|ref|ZP_06567801.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
 gi|166199831|sp|A4FKE4|RL35_SACEN RecName: Full=50S ribosomal protein L35
 gi|133914406|emb|CAM04519.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
          Length = 64

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 40/58 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF +T +GK+R + AG+RH + K+S++  R   GT  +A AD K++
Sbjct: 1  MPKNKTHSGTAKRFRVTGSGKLRREQAGRRHILEKKSSRVTRRLEGTEAVAKADVKRI 58


>gi|125973739|ref|YP_001037649.1| 50S ribosomal protein L35P [Clostridium thermocellum ATCC 27405]
 gi|256005541|ref|ZP_05430502.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
 gi|281417895|ref|ZP_06248915.1| ribosomal protein L35 [Clostridium thermocellum JW20]
 gi|166231180|sp|A3DES7|RL35_CLOTH RecName: Full=50S ribosomal protein L35
 gi|125713964|gb|ABN52456.1| LSU ribosomal protein L35P [Clostridium thermocellum ATCC 27405]
 gi|255990521|gb|EEU00642.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
 gi|281409297|gb|EFB39555.1| ribosomal protein L35 [Clostridium thermocellum JW20]
 gi|316940067|gb|ADU74101.1| ribosomal protein L35 [Clostridium thermocellum DSM 1313]
          Length = 65

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+SSSKKRF +T TGKV+   A K H + K+++K  RN R + + +SA+A  VI+
Sbjct: 1  MPKIKTHSSSKKRFKLTGTGKVKRAKAYKSHILTKKTSKRKRNLRKSTIASSANA-SVIK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 KLIP 63


>gi|332297584|ref|YP_004439506.1| 50S ribosomal protein L35 [Treponema brennaborense DSM 12168]
 gi|332180687|gb|AEE16375.1| 50S ribosomal protein L35 [Treponema brennaborense DSM 12168]
          Length = 66

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 42/66 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRFS+T +GKV+ +    RH + K++ K  R  R + +L+ ADA KV +
Sbjct: 1  MPKMKTKRAAAKRFSLTGSGKVKYKKMNLRHILTKKAAKRKRQLRASGILSEADAAKVRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|283778176|ref|YP_003368931.1| 50S ribosomal protein L35 [Pirellula staleyi DSM 6068]
 gi|283436629|gb|ADB15071.1| ribosomal protein L35 [Pirellula staleyi DSM 6068]
          Length = 67

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 40/59 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  +KKRF +TA GK++ +AAG  H   +RS K  RN RGT VL +  + +++
Sbjct: 1  MPKMKTHKGTKKRFRLTARGKIKHRAAGTSHLATRRSKKRRRNLRGTRVLETTMSHQIV 59


>gi|116670039|ref|YP_830972.1| 50S ribosomal protein L35 [Arthrobacter sp. FB24]
 gi|220912250|ref|YP_002487559.1| 50S ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
 gi|325962864|ref|YP_004240770.1| 50S ribosomal protein L35P [Arthrobacter phenanthrenivorans
          Sphe3]
 gi|166231153|sp|A0JV02|RL35_ARTS2 RecName: Full=50S ribosomal protein L35
 gi|254802428|sp|B8HGA8|RL35_ARTCA RecName: Full=50S ribosomal protein L35
 gi|116610148|gb|ABK02872.1| LSU ribosomal protein L35P [Arthrobacter sp. FB24]
 gi|219859128|gb|ACL39470.1| ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
 gi|323468951|gb|ADX72636.1| LSU ribosomal protein L35P [Arthrobacter phenanthrenivorans
          Sphe3]
          Length = 64

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK+R Q A +RH +  +S++  R   G  ++   DA KVIR
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKLRRQQANRRHYLEHKSSRLTRRLAGDKIVFKGDA-KVIR 59

Query: 61 NYL 63
            L
Sbjct: 60 KML 62


>gi|91776353|ref|YP_546109.1| 50S ribosomal protein L35P [Methylobacillus flagellatus KT]
 gi|124078995|sp|Q1GZR9|RL35_METFK RecName: Full=50S ribosomal protein L35
 gi|91710340|gb|ABE50268.1| LSU ribosomal protein L35P [Methylobacillus flagellatus KT]
          Length = 65

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF     GKV+   +  RH + K++ K  RN RGT +++S D K+V R
Sbjct: 1  MPKMKTKSSAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAIISSTDVKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|303242606|ref|ZP_07329082.1| ribosomal protein L35 [Acetivibrio cellulolyticus CD2]
 gi|302589863|gb|EFL59635.1| ribosomal protein L35 [Acetivibrio cellulolyticus CD2]
          Length = 65

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 41/58 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+S+SKKRFS+T TGKV+   A KRH + K++ K  RN R + +++  +A  V
Sbjct: 1  MPKIKTHSASKKRFSLTGTGKVKRAKAFKRHILTKKTTKRTRNLRKSTIVSDVNAATV 58


>gi|88855451|ref|ZP_01130115.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
 gi|88815358|gb|EAR25216.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
          Length = 64

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  Q AG RH +  +S K  R      VLAS DA KVI+
Sbjct: 1  MPKQKTHSGTKKRFKITGSGKVMKQQAGMRHNLEVKSGKRKRALNQDQVLASQDA-KVIK 59

Query: 61 NYL 63
            L
Sbjct: 60 KLL 62


>gi|87306633|ref|ZP_01088780.1| 50S ribosomal protein L35-like [Blastopirellula marina DSM 3645]
 gi|87290812|gb|EAQ82699.1| 50S ribosomal protein L35-like [Blastopirellula marina DSM 3645]
          Length = 67

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 34/54 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+  +KKRF +TA G V+ +  G  H   + S K +RN RGT VLA  D
Sbjct: 1  MPKMKTHKGTKKRFRLTANGHVKHRQCGTSHLATRLSTKRVRNLRGTRVLAEVD 54


>gi|325103182|ref|YP_004272836.1| LSU ribosomal protein L35P [Pedobacter saltans DSM 12145]
 gi|324972030|gb|ADY51014.1| LSU ribosomal protein L35P [Pedobacter saltans DSM 12145]
          Length = 66

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKTNSS+KKRFS+T TGKV+ ++A K H + K++ K  RN   T  +  +D
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKVKRKSAYKSHILTKKTTKQKRNLTHTAYVHESD 54


>gi|313763449|gb|EFS34813.1| ribosomal protein L35 [Propionibacterium acnes HL013PA1]
 gi|313773423|gb|EFS39389.1| ribosomal protein L35 [Propionibacterium acnes HL074PA1]
 gi|313793835|gb|EFS41864.1| ribosomal protein L35 [Propionibacterium acnes HL110PA1]
 gi|313801225|gb|EFS42483.1| ribosomal protein L35 [Propionibacterium acnes HL110PA2]
 gi|313808091|gb|EFS46568.1| ribosomal protein L35 [Propionibacterium acnes HL087PA2]
 gi|313811439|gb|EFS49153.1| ribosomal protein L35 [Propionibacterium acnes HL083PA1]
 gi|313813592|gb|EFS51306.1| ribosomal protein L35 [Propionibacterium acnes HL025PA1]
 gi|313816631|gb|EFS54345.1| ribosomal protein L35 [Propionibacterium acnes HL059PA1]
 gi|313819730|gb|EFS57444.1| ribosomal protein L35 [Propionibacterium acnes HL046PA2]
 gi|313822261|gb|EFS59975.1| ribosomal protein L35 [Propionibacterium acnes HL036PA1]
 gi|313823745|gb|EFS61459.1| ribosomal protein L35 [Propionibacterium acnes HL036PA2]
 gi|313826067|gb|EFS63781.1| ribosomal protein L35 [Propionibacterium acnes HL063PA1]
 gi|313829640|gb|EFS67354.1| ribosomal protein L35 [Propionibacterium acnes HL063PA2]
 gi|313831178|gb|EFS68892.1| ribosomal protein L35 [Propionibacterium acnes HL007PA1]
 gi|313834839|gb|EFS72553.1| ribosomal protein L35 [Propionibacterium acnes HL056PA1]
 gi|313836585|gb|EFS74299.1| ribosomal protein L35 [Propionibacterium acnes HL037PA2]
 gi|313840044|gb|EFS77758.1| ribosomal protein L35 [Propionibacterium acnes HL086PA1]
 gi|314914608|gb|EFS78439.1| ribosomal protein L35 [Propionibacterium acnes HL005PA4]
 gi|314919435|gb|EFS83266.1| ribosomal protein L35 [Propionibacterium acnes HL050PA1]
 gi|314920657|gb|EFS84488.1| ribosomal protein L35 [Propionibacterium acnes HL050PA3]
 gi|314923957|gb|EFS87788.1| ribosomal protein L35 [Propionibacterium acnes HL001PA1]
 gi|314924557|gb|EFS88388.1| ribosomal protein L35 [Propionibacterium acnes HL036PA3]
 gi|314928095|gb|EFS91926.1| ribosomal protein L35 [Propionibacterium acnes HL044PA1]
 gi|314930427|gb|EFS94258.1| ribosomal protein L35 [Propionibacterium acnes HL067PA1]
 gi|314954518|gb|EFS98924.1| ribosomal protein L35 [Propionibacterium acnes HL027PA1]
 gi|314957361|gb|EFT01464.1| ribosomal protein L35 [Propionibacterium acnes HL002PA1]
 gi|314962175|gb|EFT06276.1| ribosomal protein L35 [Propionibacterium acnes HL002PA2]
 gi|314963804|gb|EFT07904.1| ribosomal protein L35 [Propionibacterium acnes HL082PA1]
 gi|314966001|gb|EFT10100.1| ribosomal protein L35 [Propionibacterium acnes HL082PA2]
 gi|314968367|gb|EFT12466.1| ribosomal protein L35 [Propionibacterium acnes HL037PA1]
 gi|314972095|gb|EFT16192.1| ribosomal protein L35 [Propionibacterium acnes HL037PA3]
 gi|314974057|gb|EFT18153.1| ribosomal protein L35 [Propionibacterium acnes HL053PA1]
 gi|314976763|gb|EFT20858.1| ribosomal protein L35 [Propionibacterium acnes HL045PA1]
 gi|314978782|gb|EFT22876.1| ribosomal protein L35 [Propionibacterium acnes HL072PA2]
 gi|314981814|gb|EFT25907.1| ribosomal protein L35 [Propionibacterium acnes HL110PA3]
 gi|314984485|gb|EFT28577.1| ribosomal protein L35 [Propionibacterium acnes HL005PA1]
 gi|314986662|gb|EFT30754.1| ribosomal protein L35 [Propionibacterium acnes HL005PA2]
 gi|314990777|gb|EFT34868.1| ribosomal protein L35 [Propionibacterium acnes HL005PA3]
 gi|315079656|gb|EFT51646.1| ribosomal protein L35 [Propionibacterium acnes HL053PA2]
 gi|315081115|gb|EFT53091.1| ribosomal protein L35 [Propionibacterium acnes HL078PA1]
 gi|315083436|gb|EFT55412.1| ribosomal protein L35 [Propionibacterium acnes HL027PA2]
 gi|315087003|gb|EFT58979.1| ribosomal protein L35 [Propionibacterium acnes HL002PA3]
 gi|315089178|gb|EFT61154.1| ribosomal protein L35 [Propionibacterium acnes HL072PA1]
 gi|315090682|gb|EFT62658.1| ribosomal protein L35 [Propionibacterium acnes HL110PA4]
 gi|315094893|gb|EFT66869.1| ribosomal protein L35 [Propionibacterium acnes HL060PA1]
 gi|315095232|gb|EFT67208.1| ribosomal protein L35 [Propionibacterium acnes HL038PA1]
 gi|315099077|gb|EFT71053.1| ribosomal protein L35 [Propionibacterium acnes HL059PA2]
 gi|315100542|gb|EFT72518.1| ribosomal protein L35 [Propionibacterium acnes HL046PA1]
 gi|315104165|gb|EFT76141.1| ribosomal protein L35 [Propionibacterium acnes HL050PA2]
 gi|315106684|gb|EFT78660.1| ribosomal protein L35 [Propionibacterium acnes HL030PA1]
 gi|315108910|gb|EFT80886.1| ribosomal protein L35 [Propionibacterium acnes HL030PA2]
 gi|327327990|gb|EGE69759.1| ribosomal protein L35 [Propionibacterium acnes HL103PA1]
 gi|327329567|gb|EGE71326.1| ribosomal protein L35 [Propionibacterium acnes HL096PA3]
 gi|327329588|gb|EGE71346.1| ribosomal protein L35 [Propionibacterium acnes HL096PA2]
 gi|327333952|gb|EGE75668.1| ribosomal protein L35 [Propionibacterium acnes HL097PA1]
 gi|327444368|gb|EGE91022.1| ribosomal protein L35 [Propionibacterium acnes HL043PA2]
 gi|327444567|gb|EGE91221.1| ribosomal protein L35 [Propionibacterium acnes HL043PA1]
 gi|327446239|gb|EGE92893.1| ribosomal protein L35 [Propionibacterium acnes HL013PA2]
 gi|327452176|gb|EGE98830.1| ribosomal protein L35 [Propionibacterium acnes HL092PA1]
 gi|327452809|gb|EGE99463.1| ribosomal protein L35 [Propionibacterium acnes HL087PA3]
 gi|327457886|gb|EGF04541.1| ribosomal protein L35 [Propionibacterium acnes HL083PA2]
 gi|328752001|gb|EGF65617.1| ribosomal protein L35 [Propionibacterium acnes HL020PA1]
 gi|328755367|gb|EGF68983.1| ribosomal protein L35 [Propionibacterium acnes HL087PA1]
 gi|328757790|gb|EGF71406.1| ribosomal protein L35 [Propionibacterium acnes HL025PA2]
 gi|328760151|gb|EGF73728.1| ribosomal protein L35 [Propionibacterium acnes HL099PA1]
 gi|328907934|gb|EGG27694.1| 50S ribosomal protein L35 [Propionibacterium sp. P08]
          Length = 72

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++S +KKRF +T +GKV A+ AGKRH    +S++  R   G  VL+  +A KV
Sbjct: 5  MPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAAKV 62


>gi|257456995|ref|ZP_05622176.1| ribosomal protein L35 [Treponema vincentii ATCC 35580]
 gi|257445704|gb|EEV20766.1| ribosomal protein L35 [Treponema vincentii ATCC 35580]
          Length = 68

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S++ KRF +T +GKV+ +    RH + K+S +  R+ R   +LA  D+KKV +
Sbjct: 1  MPKMKSKSAAAKRFKLTGSGKVKYKQMNLRHILTKKSPQRKRDLRKGGILAEVDSKKVRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202]
 gi|282854558|ref|ZP_06263893.1| ribosomal protein L35 [Propionibacterium acnes J139]
 gi|289426427|ref|ZP_06428170.1| ribosomal protein L35 [Propionibacterium acnes SK187]
 gi|289427771|ref|ZP_06429482.1| ribosomal protein L35 [Propionibacterium acnes J165]
 gi|295130950|ref|YP_003581613.1| ribosomal protein L35 [Propionibacterium acnes SK137]
 gi|54036248|sp|Q6A7V2|RL35_PROAC RecName: Full=50S ribosomal protein L35
 gi|50840496|gb|AAT83163.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202]
 gi|282582140|gb|EFB87522.1| ribosomal protein L35 [Propionibacterium acnes J139]
 gi|289153155|gb|EFD01873.1| ribosomal protein L35 [Propionibacterium acnes SK187]
 gi|289159035|gb|EFD07228.1| ribosomal protein L35 [Propionibacterium acnes J165]
 gi|291376852|gb|ADE00707.1| ribosomal protein L35 [Propionibacterium acnes SK137]
 gi|332675830|gb|AEE72646.1| 50S ribosomal protein L35 [Propionibacterium acnes 266]
          Length = 68

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++S +KKRF +T +GKV A+ AGKRH    +S++  R   G  VL+  +A KV
Sbjct: 1  MPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAAKV 58


>gi|311894942|dbj|BAJ27350.1| putative ribosomal protein L35 [Kitasatospora setae KM-6054]
          Length = 64

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF IT +GKV  + AG+RH +  + +   R   GT+ LA  DAKK+
Sbjct: 1  MPKQKTHSGASKRFKITGSGKVLRERAGRRHLLEHKPSTLTRKLAGTVELAPGDAKKI 58


>gi|119716686|ref|YP_923651.1| 50S ribosomal protein L35 [Nocardioides sp. JS614]
 gi|166231207|sp|A1SJH9|RL35_NOCSJ RecName: Full=50S ribosomal protein L35
 gi|119537347|gb|ABL81964.1| LSU ribosomal protein L35P [Nocardioides sp. JS614]
          Length = 64

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK KT+S + KRF +T +GK+  + AGKRH + K+++K  R   GT  LA AD K+
Sbjct: 1  MPKNKTHSGASKRFRVTGSGKILREKAGKRHNLEKKASKVTRRMTGTTELAKADVKR 57


>gi|149919498|ref|ZP_01907978.1| 50S Ribosomal protein L35 [Plesiocystis pacifica SIR-1]
 gi|149819623|gb|EDM79050.1| 50S Ribosomal protein L35 [Plesiocystis pacifica SIR-1]
          Length = 67

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S SKKRF  TA+GKV+ + + K H + K+    IR  RG M +AS   +K I+
Sbjct: 1  MPKMKSHSGSKKRFRFTASGKVKRKHSHKNHILTKKGPTRIRRLRG-MTVASEPDQKRIK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 EMLPYG 65


>gi|154490250|ref|ZP_02030511.1| hypothetical protein PARMER_00482 [Parabacteroides merdae ATCC
          43184]
 gi|218259671|ref|ZP_03475320.1| hypothetical protein PRABACTJOHN_00979 [Parabacteroides johnsonii
          DSM 18315]
 gi|154089142|gb|EDN88186.1| hypothetical protein PARMER_00482 [Parabacteroides merdae ATCC
          43184]
 gi|218224964|gb|EEC97614.1| hypothetical protein PRABACTJOHN_00979 [Parabacteroides johnsonii
          DSM 18315]
          Length = 65

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS +KKRF++T TGK++ + A K H + K++ K  RN   T ++AS D   V
Sbjct: 1  MPKMKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTTKQKRNLTHTGLVASVDVSNV 58


>gi|323704474|ref|ZP_08116052.1| ribosomal protein L35 [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535936|gb|EGB25709.1| ribosomal protein L35 [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 65

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF++T TGKV+   A KRH + K++ K  RN R    L+  DAK + R
Sbjct: 1  MPKMKTHSGAAKRFALTKTGKVKRSKAFKRHILTKKTRKTKRNLRKIAYLSGVDAKNIKR 60


>gi|256394618|ref|YP_003116182.1| 50S ribosomal protein L35 [Catenulispora acidiphila DSM 44928]
 gi|256360844|gb|ACU74341.1| ribosomal protein L35 [Catenulispora acidiphila DSM 44928]
          Length = 64

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S SKKRF +T +GK+    AG RH   ++S+++ R   G + +A +D K++ R
Sbjct: 1  MPKQKTHSGSKKRFKVTGSGKIMRGQAGMRHNFERKSSEYTRQHTGEVEVAKSDVKRIKR 60


>gi|149276295|ref|ZP_01882439.1| 50S ribosomal protein L35 [Pedobacter sp. BAL39]
 gi|149232815|gb|EDM38190.1| 50S ribosomal protein L35 [Pedobacter sp. BAL39]
          Length = 66

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRFS+T TGK+  + A K H + K S K  RN   T +++ AD   V R
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKIARKNAYKSHILTKMSTKRKRNLSNTSMVSDADMGNVKR 60


>gi|119962218|ref|YP_947379.1| 50S ribosomal protein L35 [Arthrobacter aurescens TC1]
 gi|166231152|sp|A1R567|RL35_ARTAT RecName: Full=50S ribosomal protein L35
 gi|119949077|gb|ABM07988.1| ribosomal protein L35 [Arthrobacter aurescens TC1]
          Length = 64

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T TGK++ Q A +RH +  +S++  R   G  ++   DA KVI+
Sbjct: 1  MPKMKTHSGAKKRFKLTGTGKLKRQQANRRHYLEHKSSRLTRRLAGDKLVFKGDA-KVIK 59

Query: 61 NYL 63
            L
Sbjct: 60 KML 62


>gi|291300539|ref|YP_003511817.1| 50S ribosomal protein L35 [Stackebrandtia nassauensis DSM 44728]
 gi|290569759|gb|ADD42724.1| ribosomal protein L35 [Stackebrandtia nassauensis DSM 44728]
          Length = 64

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S  +KR  IT TGK+R Q A +RH +  +S++  R   G +  A AD KKV R
Sbjct: 1  MPKMKSHSGMRKRVKITGTGKLRRQRANRRHYLEHKSSRLTRRLDGRVDFAKADVKKVKR 60


>gi|118595087|ref|ZP_01552434.1| 50S ribosomal protein L35 [Methylophilales bacterium HTCC2181]
 gi|118440865|gb|EAV47492.1| 50S ribosomal protein L35 [Methylophilales bacterium HTCC2181]
          Length = 65

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF    +G ++   +  RH + K++ K  RN RGT +++S+DAK+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGSGAIKRTHSHLRHILTKKTTKQKRNLRGTEIISSSDAKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|302541295|ref|ZP_07293637.1| ribosomal protein L35 [Streptomyces hygroscopicus ATCC 53653]
 gi|302458913|gb|EFL22006.1| ribosomal protein L35 [Streptomyces himastatinicus ATCC 53653]
          Length = 64

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S ++KRF +T +GKV  Q AG+RH +  + +   R   G + +A ADAKK+
Sbjct: 1  MPKNKTHSGARKRFKVTGSGKVMRQRAGRRHLLEHKPSTLTRRLEGKVEMAPADAKKI 58


>gi|294811659|ref|ZP_06770302.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
 gi|326440157|ref|ZP_08214891.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
 gi|294324258|gb|EFG05901.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
          Length = 64

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S SKKRF IT +GKV  + AGKRH +  + +   R   G   +A  DAKK+
Sbjct: 1  MPKNKTHSGSKKRFKITGSGKVLRERAGKRHLLEHKPSTLTRRLTGNAEMAPGDAKKI 58


>gi|255534995|ref|YP_003095366.1| LSU ribosomal protein L35p [Flavobacteriaceae bacterium 3519-10]
 gi|255341191|gb|ACU07304.1| LSU ribosomal protein L35p [Flavobacteriaceae bacterium 3519-10]
          Length = 65

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGK++ + A K H + K+  K  RN   T  +A  D K V+R
Sbjct: 1  MPKLKTKSGAKKRFKLTGTGKIKRKGAFKSHILTKKETKQKRNLTQTSYVAEVDKKSVLR 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|184201212|ref|YP_001855419.1| 50S ribosomal protein L35 [Kocuria rhizophila DC2201]
 gi|226725022|sp|B2GKF4|RL35_KOCRD RecName: Full=50S ribosomal protein L35
 gi|183581442|dbj|BAG29913.1| 50S ribosomal protein L35 [Kocuria rhizophila DC2201]
          Length = 65

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GKV+ Q A +RH +  +S++  R   G  ++++    K I+
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLAGDQIVSTPGEAKAIK 60

Query: 61 NYL 63
            L
Sbjct: 61 RML 63


>gi|257064216|ref|YP_003143888.1| LSU ribosomal protein L35P [Slackia heliotrinireducens DSM 20476]
 gi|256791869|gb|ACV22539.1| LSU ribosomal protein L35P [Slackia heliotrinireducens DSM 20476]
          Length = 65

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S SKKRF +T TGK+    A K H   K+S K IRN R    LA+AD K V
Sbjct: 1  MPKMKTHSGSKKRFRVTPTGKIMRGKAYKSHIKTKKSPKRIRNFRKDTELAAADRKVV 58


>gi|269795536|ref|YP_003314991.1| 50S ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
 gi|269097721|gb|ACZ22157.1| LSU ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
          Length = 64

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 40/58 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF IT +GKV  + A KRH +  +S++  R   G +V+++AD KK+
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANKRHLLEHKSSRRKRRLSGDLVVSAADVKKI 58


>gi|256827014|ref|YP_003150973.1| 50S ribosomal protein L35P [Cryptobacterium curtum DSM 15641]
 gi|256583157|gb|ACU94291.1| LSU ribosomal protein L35P [Cryptobacterium curtum DSM 15641]
          Length = 65

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 37/61 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF +T +GK+    A K H M K+S K  RN R    LA AD K + R
Sbjct: 1  MPKMKTHSGTAKRFRVTGSGKIMHAKAFKSHIMTKKSQKRKRNFRHETELAHADQKMIGR 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>gi|255531806|ref|YP_003092178.1| 50S ribosomal protein L35 [Pedobacter heparinus DSM 2366]
 gi|255344790|gb|ACU04116.1| ribosomal protein L35 [Pedobacter heparinus DSM 2366]
          Length = 66

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRFS+T TGK+  + A K H + K S K  RN   T +++ AD   V R
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKIARKNAYKSHILTKMSTKRKRNLGQTSMVSDADMGNVKR 60


>gi|254385011|ref|ZP_05000345.1| 50S ribosomal protein L35 [Streptomyces sp. Mg1]
 gi|194343890|gb|EDX24856.1| 50S ribosomal protein L35 [Streptomyces sp. Mg1]
          Length = 64

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S+K  R   G   +A  DA K+
Sbjct: 1  MPKNKTHSGTKKRFKVTGSGKILRERAGKRHLLEHKSSKLTRRLTGNAEMAPGDAAKI 58


>gi|302339089|ref|YP_003804295.1| ribosomal protein L35 [Spirochaeta smaragdinae DSM 11293]
 gi|301636274|gb|ADK81701.1| ribosomal protein L35 [Spirochaeta smaragdinae DSM 11293]
          Length = 66

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KR+S+T +GKV+ +  G RH + K+S K  RN R   VL+ A+ +K  +
Sbjct: 1  MPKMKTRKSAAKRYSVTGSGKVKYKKQGLRHILTKKSTKRKRNLRHAGVLSKAETEKA-K 59

Query: 61 NYLP 64
            LP
Sbjct: 60 GLLP 63


>gi|282877701|ref|ZP_06286516.1| ribosomal protein L35 [Prevotella buccalis ATCC 35310]
 gi|281300273|gb|EFA92627.1| ribosomal protein L35 [Prevotella buccalis ATCC 35310]
          Length = 65

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRFS T TGK++   A   H + K++ K  RN  G  ++ SA+ K+V
Sbjct: 1  MPKLKTNSGAKKRFSFTGTGKIKRNHAYHSHILTKKTKKQKRNLVGYTLVDSANVKQV 58


>gi|253998431|ref|YP_003050494.1| 50S ribosomal protein L35 [Methylovorus sp. SIP3-4]
 gi|313200506|ref|YP_004039164.1| 50S ribosomal protein L35 [Methylovorus sp. MP688]
 gi|253985110|gb|ACT49967.1| ribosomal protein L35 [Methylovorus sp. SIP3-4]
 gi|312439822|gb|ADQ83928.1| ribosomal protein L35 [Methylovorus sp. MP688]
          Length = 65

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF     GKV+   +  RH + K++ K  RN RGT ++++ D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAIISATDVKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|258654265|ref|YP_003203421.1| 50S ribosomal protein L35 [Nakamurella multipartita DSM 44233]
 gi|258557490|gb|ACV80432.1| ribosomal protein L35 [Nakamurella multipartita DSM 44233]
          Length = 64

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKR  +T +GK+    AGKRH + K+S K  R   G   +A ADA ++ R
Sbjct: 1  MPKNKTHSGTKKRIKVTGSGKLTHAGAGKRHNLEKKSTKMTRRMDGAKEIAPADAPRIRR 60


>gi|237653684|ref|YP_002889998.1| 50S ribosomal protein L35 [Thauera sp. MZ1T]
 gi|237624931|gb|ACR01621.1| ribosomal protein L35 [Thauera sp. MZ1T]
          Length = 65

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF + ++G ++   A KRH + K++ K  R+ RG   + +AD +K+IR
Sbjct: 1  MPKMKTKSGAKKRFKVRSSGGIKRSQAFKRHILTKKTTKVKRHLRGMTEVHAAD-EKLIR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|328881242|emb|CCA54481.1| LSU ribosomal protein L35p [Streptomyces venezuelae ATCC 10712]
          Length = 64

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S+K  R   G   +A  DA K+
Sbjct: 1  MPKNKTHSGAKKRFKVTGSGKILRERAGKRHLLEHKSSKLTRRLTGNAEMAPGDAAKI 58


>gi|307325423|ref|ZP_07604625.1| ribosomal protein L35 [Streptomyces violaceusniger Tu 4113]
 gi|306888892|gb|EFN19876.1| ribosomal protein L35 [Streptomyces violaceusniger Tu 4113]
          Length = 64

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF +T +GKV  Q AG+RH +  + +   R   G + LA ADAKK+
Sbjct: 1  MPKNKTHSGASKRFKLTGSGKVVRQRAGRRHLLEHKPSTLTRRLAGKVELAPADAKKI 58


>gi|325971719|ref|YP_004247910.1| 50S ribosomal protein L35 [Spirochaeta sp. Buddy]
 gi|324026957|gb|ADY13716.1| 50S ribosomal protein L35 [Spirochaeta sp. Buddy]
          Length = 65

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF +T TGKVR +  G RH + K+S+K   N R   +L   +AK+V +
Sbjct: 1  MPKMKTRRSVAKRFHVTGTGKVRYKKQGLRHILTKKSSKRKGNLRAAGILEDMEAKRV-K 59

Query: 61 NYLP 64
            LP
Sbjct: 60 TMLP 63


>gi|269215920|ref|ZP_06159774.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
 gi|269130179|gb|EEZ61257.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
          Length = 71

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S SKKRF +T TGK+    A K H   K+S K IR  R   +++SAD KKV+R
Sbjct: 8  MPKMKTHSGSKKRFRVTGTGKIVRGKAYKSHIKTKKSPKRIRGFRHDGLVSSAD-KKVVR 66

Query: 61 NYL 63
            L
Sbjct: 67 ARL 69


>gi|300787906|ref|YP_003768197.1| 50S ribosomal protein L35 [Amycolatopsis mediterranei U32]
 gi|299797420|gb|ADJ47795.1| large subunit ribosomal protein L35 [Amycolatopsis mediterranei
          U32]
          Length = 64

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KR   T TGK+R Q  G+RH M K+S++  R   GT  ++  +A ++ R
Sbjct: 1  MPKMKTHSGTSKRIRKTGTGKLRRQMTGRRHRMEKKSSRVTRRLEGTTEVSKTEAGRLKR 60


>gi|288801330|ref|ZP_06406784.1| ribosomal protein L35 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331713|gb|EFC70197.1| ribosomal protein L35 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 65

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF  T TGK++ + A  RH + K++ K  RN     V+ S+D K+V
Sbjct: 1  MPKVKTNSGAKKRFKFTGTGKIKRRRAYHRHILTKKTKKQKRNLTHQTVVDSSDIKQV 58


>gi|150007317|ref|YP_001302060.1| 50S ribosomal protein L35 [Parabacteroides distasonis ATCC 8503]
 gi|255014058|ref|ZP_05286184.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_7]
 gi|256839606|ref|ZP_05545115.1| ribosomal protein L35 [Parabacteroides sp. D13]
 gi|262382110|ref|ZP_06075248.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_33B]
 gi|298375303|ref|ZP_06985260.1| ribosomal protein L35 [Bacteroides sp. 3_1_19]
 gi|301310683|ref|ZP_07216622.1| ribosomal protein L35 [Bacteroides sp. 20_3]
 gi|166199811|sp|A6L9S4|RL35_PARD8 RecName: Full=50S ribosomal protein L35
 gi|149935741|gb|ABR42438.1| ribosomal protein L35 [Parabacteroides distasonis ATCC 8503]
 gi|256738536|gb|EEU51861.1| ribosomal protein L35 [Parabacteroides sp. D13]
 gi|262297287|gb|EEY85217.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_33B]
 gi|298267803|gb|EFI09459.1| ribosomal protein L35 [Bacteroides sp. 3_1_19]
 gi|300832257|gb|EFK62888.1| ribosomal protein L35 [Bacteroides sp. 20_3]
          Length = 65

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS +KKRF++T +GK++ + A K H + K++ K  RN   T ++AS D   V
Sbjct: 1  MPKMKTNSGAKKRFALTGSGKIKRKHAFKSHILTKKTKKQKRNLTHTGLVASVDVSNV 58


>gi|119897372|ref|YP_932585.1| 50S ribosomal protein L35 [Azoarcus sp. BH72]
 gi|166231154|sp|A1K4E3|RL35_AZOSB RecName: Full=50S ribosomal protein L35
 gi|119669785|emb|CAL93698.1| 50S ribosomal protein L35 [Azoarcus sp. BH72]
          Length = 65

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF + ++G ++   A KRH + K++ K  R  RG M    A  +K+IR
Sbjct: 1  MPKMKTKSSAKKRFKVRSSGGIKRSQAFKRHILTKKTTKSKRQLRG-MTEVHASDEKLIR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|313205746|ref|YP_004044923.1| LSU ribosomal protein l35p [Riemerella anatipestifer DSM 15868]
 gi|312445062|gb|ADQ81417.1| LSU ribosomal protein L35P [Riemerella anatipestifer DSM 15868]
 gi|315022858|gb|EFT35882.1| LSU ribosomal protein L35p [Riemerella anatipestifer RA-YM]
 gi|325336812|gb|ADZ13086.1| Ribosomal protein L35 [Riemerella anatipestifer RA-GD]
          Length = 65

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 39/61 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF++T TGK++ + A K H + K+  K  RN   T  + S+D K V++
Sbjct: 1  MPKLKTKSGAKKRFALTGTGKIKRKNAYKSHILTKKETKQKRNLTQTSYVHSSDEKSVLK 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|257056554|ref|YP_003134386.1| 50S ribosomal protein L35 [Saccharomonospora viridis DSM 43017]
 gi|256586426|gb|ACU97559.1| LSU ribosomal protein L35P [Saccharomonospora viridis DSM 43017]
          Length = 64

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S   KR  +T +GK+R + AG+RH + K+S++  R   GT  +A+AD ++V R
Sbjct: 1  MPKNKSHSGMSKRVRVTGSGKLRREQAGRRHLLEKKSSRVTRRLEGTTEVAAADVRRVKR 60


>gi|55980521|ref|YP_143818.1| 50S ribosomal protein L35 [Thermus thermophilus HB8]
 gi|161611246|ref|YP_004159.2| 50S ribosomal protein L35 [Thermus thermophilus HB27]
 gi|62287408|sp|Q5SKU1|RL35_THET8 RecName: Full=50S ribosomal protein L35
 gi|62297685|sp|P80341|RL35_THETH RecName: Full=50S ribosomal protein L35
 gi|118573025|sp|Q72L77|RL35_THET2 RecName: Full=50S ribosomal protein L35
 gi|116668230|pdb|2J01|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Mrna, Trna And Paromomycin (Part 2 Of
          4). This File Contains The 50s Subunit From Molecule I.
 gi|116668291|pdb|2J03|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Mrna, Trna And Paromomycin (Part 4 Of
          4). This File Contains The 50s Subunit From Molecule
          Ii.
 gi|119389763|pdb|2HGJ|7 Chain 7, Crystal Structure Of The 70s Thermus Thermophilus
          Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
          P Codons. This Entry 2hgj Contains 50s Ribosomal
          Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb
          Entry 2hgi.
 gi|119389820|pdb|2HGQ|7 Chain 7, Crystal Structure Of The 70s Thermus Thermophilus
          Ribosome With Translocated And Rotated Shine-Dalgarno
          Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          2hgp.
 gi|119389876|pdb|2HGU|7 Chain 7, 70s T.Th. Ribosome Functional Complex With Mrna And E-
          And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
          Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
          Found In Pdb Entry 2hgr.
 gi|149240912|pdb|1VSA|AA Chain a, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
          Functional Interactions And Rearrangements. This File,
          1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
          Subunit Is In The File 2ow8
 gi|157836518|pdb|2V47|8 Chain 8, Structure Of The Ribosome Recycling Factor Bound To The
          Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
          And Trna-Fmet (Part 2 Of 4). This File Contains The 50s
          Subunit For Molecule 1.
 gi|157836574|pdb|2V49|8 Chain 8, Structure Of The Ribosome Recycling Factor Bound To The
          Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
          And Trna-Fmet (Part 4 Of 4). This File Contains The 50s
          Subunit Of Molecule 2.
 gi|160285454|pdb|1VSP|AA Chain a, Interactions And Dynamics Of The Shine-Dalgarno Helix In
          The 70s Ribosome. This File, 1vsp, Contains The 50s
          Ribosome Subunit. 30s Ribosome Subunit Is In The File
          2qnh
 gi|209156548|pdb|3D5B|8 Chain 8, Structural Basis For Translation Termination On The 70s
          Ribosome. This File Contains The 50s Subunit Of One 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes As Described In Remark 400.
 gi|209156602|pdb|3D5D|8 Chain 8, Structural Basis For Translation Termination On The 70s
          Ribosome. This File Contains The 50s Subunit Of The
          Second 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938851|pdb|2JL6|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4).
          This File Contains The 50s Subunit.
 gi|211938909|pdb|2JL8|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4).
          This File Contains The 50s Subunit.
 gi|218766825|pdb|3F1F|8 Chain 8, Crystal Structure Of A Translation Termination Complex
          Formed With Release Factor Rf2. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes As Described In
          Remark 400.
 gi|218766880|pdb|3F1H|8 Chain 8, Crystal Structure Of A Translation Termination Complex
          Formed With Release Factor Rf2. This File Contains The
          50s Subunit Of The Second 70s Ribosome. The Entire
          Crystal Structure Contains Two 70s Ribosomes As
          Described In Remark 400.
 gi|226887432|pdb|2WDI|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A-Site Trna,
          Deacylated P-Site Trna, And E-Site Trna. This File
          Contains The 50s Subunit For Molecule I.
 gi|226887464|pdb|2WDJ|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A-Site Trna,
          Deacylated P-Site Trna, And E-Site Trna. This File
          Contains The 50s Subunit For Molecule Ii.
 gi|226887521|pdb|2WDL|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A- And P-Site
          Trnas, And E-Site Trna.  This File Contains The 50s
          Subunit For Molecule I.
 gi|226887578|pdb|2WDN|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A- And P-Site
          Trnas, And E-Site Trna.  This File Contains The 50s
          Subunit For Molecule Ii.
 gi|237823562|pdb|2WH2|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome
 gi|237823621|pdb|2WH4|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome
 gi|260100040|pdb|3HUX|8 Chain 8, Structure Of Ef-P Bound To The 70s Ribosome; This File
          Contains The 50s Subunit For Molecule I.
 gi|260100096|pdb|3HUZ|8 Chain 8, Structure Of Ef-P Bound To The 70s Ribosome; This File
          Contains The 50s Subunit For Molecule Ii.
 gi|261824517|pdb|2WRJ|8 Chain 8, The Structure Of The Ribosome With Elongation Factor G
          Trapped In The Post-Translocational State (Part 2 Of
          4).
 gi|261824579|pdb|2WRL|8 Chain 8, The Structure Of The Ribosome With Elongation Factor G
          Trapped In The Post-Translocational State. (Part 4 Of
          4).
 gi|261824642|pdb|2WRO|8 Chain 8, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
          And Trna (Part 2 Of 4).
 gi|261824701|pdb|2WRR|8 Chain 8, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
          And Trna (Part 4 Of 4).
 gi|281307222|pdb|3KIR|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Precleavage State; Part 2 Of 4)
 gi|281307280|pdb|3KIT|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Precleavage State; Part 4 Of 4)
 gi|281307338|pdb|3KIW|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Postcleavage State; Part 2 Of 4)
 gi|281307396|pdb|3KIY|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Postcleavage State; Part 4 Of 4)
 gi|288965659|pdb|3KNI|8 Chain 8, The Structures Of Viomycin Bound To The 70s Ribosome.
          This File Contains The 50s Subunit For Molecule I
 gi|288965691|pdb|3KNK|8 Chain 8, The Structures Of Viomycin Bound To The 70s Ribosome.
          This File Contains The 50s Subunit For Molecule Ii.
 gi|288965723|pdb|3KNM|8 Chain 8, The Structures Of Capreomycin Bound To The 70s Ribosome.
          Thi Contains The 50s Subunit For Molecule I.
 gi|288965755|pdb|3KNO|8 Chain 8, The Structures Of Capreomycin Bound To The 70s Ribosome.
          Thi Contains The 50s Subunit For Molecule Ii
 gi|294979503|pdb|3I8F|8 Chain 8, Elongation Complex Of The 70s Ribosome With Three Trnas
          And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
          Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
          The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
          (50s).
 gi|294979587|pdb|3I8I|8 Chain 8, Elongation Complex Of The 70s Ribosome With Three Trnas
          And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
          Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
          The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
          (30s).
 gi|294979641|pdb|3I9C|8 Chain 8, Initiation Complex Of 70s Ribosome With Two Trnas And
          Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule
          B. The 30s Subunit Can Be Found In Pdb Entry 3i9b.
          Molecule A In The S Asymmetric Unit Is Deposited As
          3i9d (30s) And 3i9e (50s)
 gi|294979695|pdb|3I9E|8 Chain 8, Initiation Complex Of 70s Ribosome With Two Trnas And
          Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule
          A. The 30s Subunit Can Be Found In Pdb Entry 3i9d.
          Molecule B In The S Asymmetric Unit Is Deposited As
          3i9b (30s) And 3i9c (50s)
 gi|295982108|pdb|2X9S|8 Chain 8, Structure Of The 70s Ribosome Bound To Release Factor 2
          And A Substrate Analog Provides Insights Into Catalysis
          Of Peptide Release
 gi|295982167|pdb|2X9U|8 Chain 8, Structure Of The 70s Ribosome Bound To Release Factor 2
          And A Substrate Analog Provides Insights Into Catalysis
          Of Peptide Release
 gi|307567995|pdb|2XG0|8 Chain 8, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
          70s Ribosome (Part 2 Of 4)
 gi|307568053|pdb|2XG2|8 Chain 8, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
          70s Ribosome (Part 4 Of 4)
 gi|309320285|pdb|3OH5|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Chloramphenicol. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320315|pdb|3OH7|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Chloramphenicol. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320387|pdb|3OHJ|8 Chain 8, Structure Of The Thermus Thermophilus Ribosome Complexed
          With Erythromycin. This File Contains The 50s Subunit
          Of One 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes.
 gi|309320417|pdb|3OHK|8 Chain 8, Structure Of The Thermus Thermophilus Ribosome Complexed
          With Erythromycin. This File Contains The 50s Subunit
          Of One 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes.
 gi|309320468|pdb|3OHZ|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Azithromycin. This File Contains The 50s
          Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320519|pdb|3OI1|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Azithromycin. This File Contains The 50s
          Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320570|pdb|3OI3|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Telithromycin. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320621|pdb|3OI5|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Telithromycin. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|312207707|pdb|2XQE|8 Chain 8, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
          70s Ribosome With A Gtp Analog
 gi|313754031|pdb|2XTG|8 Chain 8, Trna Tranlocation On The 70s Ribosome: The        Pre-
          Translocational Translocation Intermediate Ti(Pre)
 gi|313754089|pdb|2XUX|8 Chain 8, Trna Tranlocation On The 70s Ribosome: The Post-
          Translocational Translocation Intermediate Ti(Post)
 gi|325533436|pdb|2Y0V|8 Chain 8, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
          A Near-Cognate Codon On The 70s Ribosome
 gi|325533495|pdb|2Y0X|8 Chain 8, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
          A Near-Cognate Codon On The 70s Ribosome
 gi|325533554|pdb|2Y0Z|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Near-Cognate Codon On The 70s Ribosome
 gi|325533613|pdb|2Y11|8 Chain 8, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
          A Cognate Codon On The 70s Ribosome.
 gi|325533672|pdb|2Y13|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Near-Cognate Codon On The 70s Ribosome
 gi|325533731|pdb|2Y15|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Cognate Codon On The 70s Ribosome.
 gi|325533790|pdb|2Y17|8 Chain 8, Ef-Tu Complex 3
 gi|325533849|pdb|2Y19|8 Chain 8, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
          A Cognate Codon On The 70s Ribosome.
 gi|55771934|dbj|BAD70375.1| 50S ribosomal protein L35 [Thermus thermophilus HB8]
          Length = 65

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A++ I+
Sbjct: 1  MPKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAER-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LLLP 63


>gi|302533485|ref|ZP_07285827.1| ribosomal protein L35 [Streptomyces sp. C]
 gi|302442380|gb|EFL14196.1| ribosomal protein L35 [Streptomyces sp. C]
          Length = 64

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GKV  + AGKRH +  +S++  R   G   +A  DA K+
Sbjct: 1  MPKNKTHSGTKKRFKVTGSGKVLRERAGKRHLLEHKSSRITRRLTGNAEMAPGDAAKI 58


>gi|294673348|ref|YP_003573964.1| 50S ribosomal protein L35 [Prevotella ruminicola 23]
 gi|294472809|gb|ADE82198.1| ribosomal protein L35 [Prevotella ruminicola 23]
          Length = 65

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRFS T TGKV+ + A   H + K++ K  RN  GT ++  ++ K+V
Sbjct: 1  MPKVKTNSGAKKRFSFTGTGKVKRRHAFHSHILTKKTKKQKRNLVGTTIVDPSNMKQV 58


>gi|239978528|ref|ZP_04701052.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|291450424|ref|ZP_06589814.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|329939050|ref|ZP_08288424.1| 50S ribosomal protein L35 [Streptomyces griseoaurantiacus M045]
 gi|291353373|gb|EFE80275.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|329301935|gb|EGG45828.1| 50S ribosomal protein L35 [Streptomyces griseoaurantiacus M045]
          Length = 64

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   G   +A  DAKK+
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRLTRRLTGNAEMAPGDAKKI 58


>gi|302550251|ref|ZP_07302593.1| ribosomal protein L35 [Streptomyces viridochromogenes DSM 40736]
 gi|302467869|gb|EFL30962.1| ribosomal protein L35 [Streptomyces viridochromogenes DSM 40736]
          Length = 64

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S S KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DAKK+
Sbjct: 1  MPKNKSHSGSSKRFKVTGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAKKI 58


>gi|326382698|ref|ZP_08204389.1| 50S ribosomal protein L35 [Gordonia neofelifaecis NRRL B-59395]
 gi|326198817|gb|EGD56000.1| 50S ribosomal protein L35 [Gordonia neofelifaecis NRRL B-59395]
          Length = 64

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF +T +GK+  Q AGKRH +  +S++  R   GT V++  DA ++ R
Sbjct: 1  MPKSKTHKGTAKRFKVTGSGKIVRQKAGKRHLLEHKSSRVTRRLDGTTVVSENDAPRIKR 60


>gi|167629867|ref|YP_001680366.1| 50S ribosomal protein l35 [Heliobacterium modesticaldum Ice1]
 gi|226725017|sp|B0TEV3|RL35_HELMI RecName: Full=50S ribosomal protein L35
 gi|167592607|gb|ABZ84355.1| 50S ribosomal protein l35 [Heliobacterium modesticaldum Ice1]
          Length = 65

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA+GK +A+ A  RH + K+S K  R  RGT V+A  D  K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTASGKFKAKNAFTRHILEKKSAKRKRQLRGTAVVAKEDTPK-LK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 ELLP 63


>gi|239917949|ref|YP_002957507.1| LSU ribosomal protein L35P [Micrococcus luteus NCTC 2665]
 gi|289704522|ref|ZP_06500957.1| ribosomal protein L35 [Micrococcus luteus SK58]
 gi|259647359|sp|C5CAP9|RL35_MICLC RecName: Full=50S ribosomal protein L35
 gi|239839156|gb|ACS30953.1| LSU ribosomal protein L35P [Micrococcus luteus NCTC 2665]
 gi|289558780|gb|EFD52036.1| ribosomal protein L35 [Micrococcus luteus SK58]
          Length = 64

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK+  Q A +RH +  +S++  R  +G  +++    K++ R
Sbjct: 1  MPKMKTHSGAKKRFRVTGSGKIMRQQANRRHYLEHKSSRLTRRLKGDQLVSKGSIKQIKR 60


>gi|160889629|ref|ZP_02070632.1| hypothetical protein BACUNI_02055 [Bacteroides uniformis ATCC
          8492]
 gi|270293971|ref|ZP_06200173.1| 50S ribosomal protein L35 [Bacteroides sp. D20]
 gi|317479176|ref|ZP_07938313.1| ribosomal protein L35 [Bacteroides sp. 4_1_36]
 gi|156860621|gb|EDO54052.1| hypothetical protein BACUNI_02055 [Bacteroides uniformis ATCC
          8492]
 gi|270275438|gb|EFA21298.1| 50S ribosomal protein L35 [Bacteroides sp. D20]
 gi|316904664|gb|EFV26481.1| ribosomal protein L35 [Bacteroides sp. 4_1_36]
          Length = 65

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++++ D  +V
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSTTDVSQV 58


>gi|313680890|ref|YP_004058629.1| LSU ribosomal protein l35p [Oceanithermus profundus DSM 14977]
 gi|313153605|gb|ADR37456.1| LSU ribosomal protein L35P [Oceanithermus profundus DSM 14977]
          Length = 65

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K R  +TA GKV A   GKRH    +S K IR+     VLA  +A++ IR
Sbjct: 1  MPKMKTHKGAKGRLKVTARGKVMASKPGKRHLNWHKSGKRIRSKGKKFVLAEGEARR-IR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 ELLP 63


>gi|114797968|ref|YP_759160.1| 50S ribosomal protein L35 [Hyphomonas neptunium ATCC 15444]
 gi|122942759|sp|Q0C533|RL35_HYPNA RecName: Full=50S ribosomal protein L35
 gi|114738142|gb|ABI76267.1| ribosomal protein L35 [Hyphomonas neptunium ATCC 15444]
          Length = 66

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF ITATGK++   AGKRH ++  + K+IR  RGT V A AD  +V +
Sbjct: 1  MPKMKTKKAAAKRFKITATGKLKHGVAGKRHRLMSHNAKYIRQNRGTSVGAKADEARV-K 59

Query: 61 NYLPNGI 67
           YLP G+
Sbjct: 60 KYLPYGL 66


>gi|328947927|ref|YP_004365264.1| 50S ribosomal protein L35 [Treponema succinifaciens DSM 2489]
 gi|328448251|gb|AEB13967.1| 50S ribosomal protein L35 [Treponema succinifaciens DSM 2489]
          Length = 66

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRFS+T TGKV+ +    RH + KRS K   + R   +L+   A ++ +
Sbjct: 1  MPKMKTKKSASKRFSLTGTGKVKYKKMNLRHILTKRSPKRKMHLRHAGILSEDSAARIRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QQLPYG 66


>gi|171463690|ref|YP_001797803.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          necessarius STIR1]
 gi|226725046|sp|B1XV12|RL35_POLNS RecName: Full=50S ribosomal protein L35
 gi|171193228|gb|ACB44189.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          necessarius STIR1]
          Length = 65

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+K RFS+ A G ++   A KRH + K++ K  R+ RG+  +A AD K  IR
Sbjct: 1  MPKMKSKSSAKMRFSVRAGGTIKRGQAFKRHILTKKTTKNKRHLRGSAEVAKADIKS-IR 59

Query: 61 NYLP 64
          + LP
Sbjct: 60 SMLP 63


>gi|71908288|ref|YP_285875.1| 50S ribosomal protein L35 [Dechloromonas aromatica RCB]
 gi|148840419|sp|Q47CM6|RL35_DECAR RecName: Full=50S ribosomal protein L35
 gi|71847909|gb|AAZ47405.1| LSU ribosomal protein L35P [Dechloromonas aromatica RCB]
          Length = 65

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRFSI A G ++   A KRH + K++ K  R+ RG   +   DA  V R
Sbjct: 1  MPKMKTKSSAKKRFSIRAGGSIKRGQAFKRHILTKKTTKVKRHLRGATAVHERDAASV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|312129890|ref|YP_003997230.1| lsu ribosomal protein l35p [Leadbetterella byssophila DSM 17132]
 gi|311906436|gb|ADQ16877.1| LSU ribosomal protein L35P [Leadbetterella byssophila DSM 17132]
          Length = 64

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF +T TGK++ + A   H + K+SNK  RN   T +++ AD  ++
Sbjct: 1  MPKQKTNSGAKKRFKLTGTGKIKRKHAFHSHILTKKSNKRKRNLVTTTLVSPADEGRI 58


>gi|167752692|ref|ZP_02424819.1| hypothetical protein ALIPUT_00949 [Alistipes putredinis DSM
          17216]
 gi|167659761|gb|EDS03891.1| hypothetical protein ALIPUT_00949 [Alistipes putredinis DSM
          17216]
          Length = 64

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN+++KKRFS T TGK++ + A   H + K+S K  RN   +  +++AD  K I+
Sbjct: 1  MPKMKTNAAAKKRFSFTGTGKIKRKHAYHSHILTKKSTKQKRNLCYSGTVSAADEAK-IK 59

Query: 61 NYL 63
          N L
Sbjct: 60 NLL 62


>gi|297195410|ref|ZP_06912808.1| 50S ribosomal protein L35 [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197719220|gb|EDY63128.1| 50S ribosomal protein L35 [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 64

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF IT +GKV  + AGKRH +  + +K  R   G   +A  D+K +
Sbjct: 1  MPKNKTHSGAKKRFKITGSGKVLRERAGKRHLLEHKPSKLTRRLTGNAEMAPGDSKTI 58


>gi|304317239|ref|YP_003852384.1| ribosomal protein L35 [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
 gi|302778741|gb|ADL69300.1| ribosomal protein L35 [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
          Length = 65

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF++T +GKV+   A KRH + K+S K  RN R    L   DAK + R
Sbjct: 1  MPKMKTHRGAAKRFALTKSGKVKRSKAFKRHILTKKSRKTKRNLRKIAYLYKTDAKNIKR 60


>gi|320449909|ref|YP_004202005.1| 50S ribosomal protein L35 [Thermus scotoductus SA-01]
 gi|320150077|gb|ADW21455.1| 50S ribosomal protein L35 [Thermus scotoductus SA-01]
          Length = 65

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +TA+GKV A   GKRH    +S K IR       LA A+A++ I+
Sbjct: 1  MPKMKTHKGAKKRVKVTASGKVMAMKTGKRHLNWHKSGKTIRQKGRKFALAQAEAER-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LLLP 63


>gi|312139881|ref|YP_004007217.1| 50S ribosomal protein l35 rpmi [Rhodococcus equi 103S]
 gi|325674241|ref|ZP_08153930.1| 50S ribosomal protein L35 [Rhodococcus equi ATCC 33707]
 gi|311889220|emb|CBH48534.1| 50S ribosomal protein L35 RpmI [Rhodococcus equi 103S]
 gi|325554921|gb|EGD24594.1| 50S ribosomal protein L35 [Rhodococcus equi ATCC 33707]
          Length = 64

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF ++ +GK+  Q AG+RH +  +S++  R   G  V+A  DA ++ R
Sbjct: 1  MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKSSRVTRRLDGVAVVADVDAPRIKR 60


>gi|319902628|ref|YP_004162356.1| LSU ribosomal protein L35P [Bacteroides helcogenes P 36-108]
 gi|319417659|gb|ADV44770.1| LSU ribosomal protein L35P [Bacteroides helcogenes P 36-108]
          Length = 65

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++++ D  +V
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSATDVNQV 58


>gi|29833280|ref|NP_827914.1| 50S ribosomal protein L35 [Streptomyces avermitilis MA-4680]
 gi|294628444|ref|ZP_06707004.1| 50S ribosomal protein L35 [Streptomyces sp. e14]
 gi|295839838|ref|ZP_06826771.1| ribosomal protein L35 [Streptomyces sp. SPB74]
 gi|302518073|ref|ZP_07270415.1| ribosomal protein L35 [Streptomyces sp. SPB78]
 gi|318061736|ref|ZP_07980457.1| 50S ribosomal protein L35 [Streptomyces sp. SA3_actG]
 gi|318080745|ref|ZP_07988077.1| 50S ribosomal protein L35 [Streptomyces sp. SA3_actF]
 gi|333028251|ref|ZP_08456315.1| putative 50S ribosomal protein L35 [Streptomyces sp. Tu6071]
 gi|54036300|sp|Q828D1|RL35_STRAW RecName: Full=50S ribosomal protein L35
 gi|29610402|dbj|BAC74449.1| putative ribosomal protein L35 [Streptomyces avermitilis MA-4680]
 gi|197698677|gb|EDY45610.1| ribosomal protein L35 [Streptomyces sp. SPB74]
 gi|292831777|gb|EFF90126.1| 50S ribosomal protein L35 [Streptomyces sp. e14]
 gi|302426968|gb|EFK98783.1| ribosomal protein L35 [Streptomyces sp. SPB78]
 gi|332748103|gb|EGJ78544.1| putative 50S ribosomal protein L35 [Streptomyces sp. Tu6071]
          Length = 64

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DAKK+
Sbjct: 1  MPKNKSHSGASKRFKVTGSGKVLRERAGKRHLLEHKSSRLTRRLTGNAEMAPGDAKKI 58


>gi|329961277|ref|ZP_08299443.1| ribosomal protein L35 [Bacteroides fluxus YIT 12057]
 gi|328531942|gb|EGF58759.1| ribosomal protein L35 [Bacteroides fluxus YIT 12057]
          Length = 65

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS +KKRF++T TGK++ + A   H + K++ K  RN   + +++S D  +V
Sbjct: 1  MPKMKTNSGAKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSSTDVSQV 58


>gi|326800362|ref|YP_004318181.1| 50S ribosomal protein L35 [Sphingobacterium sp. 21]
 gi|326551126|gb|ADZ79511.1| 50S ribosomal protein L35 [Sphingobacterium sp. 21]
          Length = 66

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRFS+T TGK++ + A K H + K S K  RN   + +++ AD   V R
Sbjct: 1  MPKVKTNSSAKKRFSLTGTGKIKRKHAYKSHILTKMSTKRKRNLTRSGLVSDADLGNVKR 60


>gi|108761640|ref|YP_631781.1| 50S ribosomal protein L35 [Myxococcus xanthus DK 1622]
 gi|118573015|sp|Q1D6E2|RL35_MYXXD RecName: Full=50S ribosomal protein L35
 gi|108465520|gb|ABF90705.1| ribosomal protein L35 [Myxococcus xanthus DK 1622]
          Length = 68

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGM-IKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT SS+KKRF +  +GKV+   A  +H     ++ K  R+ RGT  L   DAKKVI
Sbjct: 1  MPKLKTRSSAKKRFDVKKSGKVKHGKAFAKHLFTFSKTPKSKRSNRGTGHLRDMDAKKVI 60

Query: 60 RNYLPNG 66
          +   P G
Sbjct: 61 KEMFPYG 67


>gi|332701963|ref|ZP_08422051.1| 50S ribosomal protein L35 [Desulfovibrio africanus str. Walvis
          Bay]
 gi|332552112|gb|EGJ49156.1| 50S ribosomal protein L35 [Desulfovibrio africanus str. Walvis
          Bay]
          Length = 65

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRFS T +GK++ +   KRH + K+S K  R  RG+ ++  A+  +V R
Sbjct: 1  MPKMKTNRSAAKRFSKTGSGKIKRRQQNKRHILTKKSPKRKRQLRGSALVDKANEGQV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 MLLP 63


>gi|297155953|gb|ADI05665.1| 50S ribosomal protein L35 [Streptomyces bingchenggensis BCW-1]
          Length = 64

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF +T +GKV  Q AG+RH +  + +   R   G   +A ADAKK+
Sbjct: 1  MPKNKTHSGASKRFKLTGSGKVMRQRAGRRHLLEHKPSTLTRRLAGKTEMAPADAKKI 58


>gi|255035016|ref|YP_003085637.1| 50S ribosomal protein L35 [Dyadobacter fermentans DSM 18053]
 gi|254947772|gb|ACT92472.1| ribosomal protein L35 [Dyadobacter fermentans DSM 18053]
          Length = 64

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTNS +KKRF++T TGK++ + A   H + K+SNK  R    T ++  ++ K+V+
Sbjct: 1  MPKMKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKSNKRKRGLVKTGLIDESNEKQVL 59


>gi|290961733|ref|YP_003492915.1| 50S ribosomal protein L35 [Streptomyces scabiei 87.22]
 gi|260651259|emb|CBG74381.1| 50S ribosomal protein L35 [Streptomyces scabiei 87.22]
          Length = 64

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   GT  +A  DA K+
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRVTRRLTGTAEMAPGDAAKI 58


>gi|114776994|ref|ZP_01452014.1| 50S ribosomal protein L35 [Mariprofundus ferrooxydans PV-1]
 gi|114552515|gb|EAU54975.1| 50S ribosomal protein L35 [Mariprofundus ferrooxydans PV-1]
          Length = 66

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRFS T +GK +   A   H + K+S K  RN RGT +++ +DAK + R
Sbjct: 1  MPKMKSNSGAAKRFSKTGSGKWKRNKAFGSHILTKKSPKRKRNMRGTELVSGSDAKALER 60


>gi|254467859|ref|ZP_05081265.1| ribosomal protein L35 [beta proteobacterium KB13]
 gi|207086669|gb|EDZ63952.1| ribosomal protein L35 [beta proteobacterium KB13]
          Length = 65

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF    +G ++   +  RH + K++ K  R+ RGT +++S D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGSGAIKRTHSHLRHILTKKTTKQKRHLRGTEIISSTDVKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|329954518|ref|ZP_08295609.1| ribosomal protein L35 [Bacteroides clarus YIT 12056]
 gi|328527486|gb|EGF54483.1| ribosomal protein L35 [Bacteroides clarus YIT 12056]
          Length = 65

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + +++  D  +V
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSPTDVSQV 58


>gi|268316190|ref|YP_003289909.1| 50S ribosomal protein L35 [Rhodothermus marinus DSM 4252]
 gi|262333724|gb|ACY47521.1| ribosomal protein L35 [Rhodothermus marinus DSM 4252]
          Length = 68

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF +TATGK++ + A   H + K+S K  R+ R   ++ + D ++V R
Sbjct: 1  MPKVKTNSGAKKRFKVTATGKIKRRRAFHSHLLTKKSKKRKRHLRQPALVDATDVRRVRR 60


>gi|257790987|ref|YP_003181593.1| 50S ribosomal protein L35 [Eggerthella lenta DSM 2243]
 gi|317488303|ref|ZP_07946866.1| ribosomal protein L35 [Eggerthella sp. 1_3_56FAA]
 gi|325830779|ref|ZP_08164163.1| ribosomal protein L35 [Eggerthella sp. HGA1]
 gi|257474884|gb|ACV55204.1| ribosomal protein L35 [Eggerthella lenta DSM 2243]
 gi|316912588|gb|EFV34134.1| ribosomal protein L35 [Eggerthella sp. 1_3_56FAA]
 gi|325487186|gb|EGC89629.1| ribosomal protein L35 [Eggerthella sp. HGA1]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK+    A K H M K+S K  RN R    +A+AD K + R
Sbjct: 1  MPKMKTHRGTAKRFRVTGSGKIMRSKAFKSHIMTKKSQKRKRNFRHETEVATADQKVIAR 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>gi|331697625|ref|YP_004333864.1| 50S ribosomal protein L35 [Pseudonocardia dioxanivorans CB1190]
 gi|326952314|gb|AEA26011.1| 50S ribosomal protein L35 [Pseudonocardia dioxanivorans CB1190]
          Length = 64

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S   KR  +T +GK+R Q  G RH +  +S+K  R+  GT+ +A AD K+V
Sbjct: 1  MPKNKTHSGISKRIKVTGSGKLRRQQTGLRHRLEVKSSKETRDLSGTVPVAKADVKRV 58


>gi|313203700|ref|YP_004042357.1| LSU ribosomal protein l35p [Paludibacter propionicigenes WB4]
 gi|312443016|gb|ADQ79372.1| LSU ribosomal protein L35P [Paludibacter propionicigenes WB4]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS +KKRF++T +GK++ + A KRH + K++ K  RN   + ++   D   V
Sbjct: 1  MPKMKTNSGAKKRFTLTGSGKIKRKHAFKRHILTKKTTKQKRNLTHSALVNKTDLTNV 58


>gi|291287863|ref|YP_003504679.1| 50S ribosomal protein L35 [Denitrovibrio acetiphilus DSM 12809]
 gi|290885023|gb|ADD68723.1| ribosomal protein L35 [Denitrovibrio acetiphilus DSM 12809]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF IT +GKV+A+ +G RH +  +S K  R  R   +L   DA+ V
Sbjct: 1  MPKMKTHKGSAKRFKITGSGKVKAKKSGLRHILTSKSTKRKRALRHPSILQGKDAQNV 58


>gi|257092827|ref|YP_003166468.1| 50S ribosomal protein L35 [Candidatus Accumulibacter phosphatis
          clade IIA str. UW-1]
 gi|257045351|gb|ACV34539.1| ribosomal protein L35 [Candidatus Accumulibacter phosphatis clade
          IIA str. UW-1]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF+I+  G+++   A KRH + K+  K  R  RG   + ++D K ++R
Sbjct: 1  MPKMKTKSGAKKRFTISPGGRIKRSHAFKRHILTKKDTKTKRQLRGVTEVHASD-KAMVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|332885362|gb|EGK05611.1| 50S ribosomal protein L35 [Dysgonomonas mossii DSM 22836]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF++T TGK++ + A K H + K++ K  RN   T  ++  D K V
Sbjct: 1  MPKKKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRNLTHTTTVSKVDEKSV 58


>gi|187250761|ref|YP_001875243.1| 50S ribosomal protein L35 [Elusimicrobium minutum Pei191]
 gi|226725008|sp|B2KB84|RL35_ELUMP RecName: Full=50S ribosomal protein L35
 gi|186970921|gb|ACC97906.1| Ribosomal protein L35 [Elusimicrobium minutum Pei191]
          Length = 67

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK-KVI 59
          MPK+K +S +KKRF+ TATGK + + AG++H +  +S    R  R T ++    A+ K++
Sbjct: 1  MPKLKNHSGAKKRFAKTATGKYKRRKAGRKHLLTPQSGSRKREMRQTGIIKPESAEGKLL 60

Query: 60 RNYLP 64
          + YLP
Sbjct: 61 KKYLP 65


>gi|325954889|ref|YP_004238549.1| 50S ribosomal protein L35 [Weeksella virosa DSM 16922]
 gi|323437507|gb|ADX67971.1| 50S ribosomal protein L35 [Weeksella virosa DSM 16922]
          Length = 65

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGK++ + A K H + K+  K  RN   T ++  AD K V R
Sbjct: 1  MPKLKTKSGAKKRFKLTGTGKIKRKHAFKSHILTKKETKQKRNLTKTGLVDKADEKSVKR 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|226306781|ref|YP_002766741.1| 50S ribosomal protein L35 [Rhodococcus erythropolis PR4]
 gi|229492709|ref|ZP_04386510.1| ribosomal protein L35 [Rhodococcus erythropolis SK121]
 gi|259647410|sp|C1A067|RL35_RHOE4 RecName: Full=50S ribosomal protein L35
 gi|226185898|dbj|BAH34002.1| 50S ribosomal protein L35 [Rhodococcus erythropolis PR4]
 gi|229320368|gb|EEN86188.1| ribosomal protein L35 [Rhodococcus erythropolis SK121]
          Length = 64

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S + KRF ++ +GK+  Q AG+RH +  +S++  R   G  V++  DA ++ R
Sbjct: 1  MPKMKSHSGASKRFKVSGSGKLMRQKAGRRHLLEHKSSRVTRRLDGVAVVSPDDAPRIKR 60


>gi|323356732|ref|YP_004223128.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
 gi|323273103|dbj|BAJ73248.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
          Length = 64

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+S +KKRF +T +GK+  Q AG RH +  +++K  R      VLA  D+K
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGKLMKQQAGMRHNLEGKASKRTRRLNQEQVLAKGDSK 56


>gi|238063947|ref|ZP_04608656.1| 50S ribosomal protein L35 [Micromonospora sp. ATCC 39149]
 gi|302866849|ref|YP_003835486.1| 50S ribosomal protein L35 [Micromonospora aurantiaca ATCC 27029]
 gi|315503264|ref|YP_004082151.1| ribosomal protein l35 [Micromonospora sp. L5]
 gi|237885758|gb|EEP74586.1| 50S ribosomal protein L35 [Micromonospora sp. ATCC 39149]
 gi|302569708|gb|ADL45910.1| ribosomal protein L35 [Micromonospora aurantiaca ATCC 27029]
 gi|315409883|gb|ADU08000.1| ribosomal protein L35 [Micromonospora sp. L5]
          Length = 64

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+++   KR  +T  GK+ AQ AG RH + K+ +   R   GT+ LA AD K++
Sbjct: 1  MPKMKSHTGMGKRVKVTGKGKIVAQQAGLRHNLEKKPSTQTRRLTGTVELAKADTKRI 58


>gi|296394205|ref|YP_003659089.1| 50S ribosomal protein L35 [Segniliparus rotundus DSM 44985]
 gi|296181352|gb|ADG98258.1| ribosomal protein L35 [Segniliparus rotundus DSM 44985]
          Length = 64

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GK+  Q AGKRH +  +     R   G + +A+ D K+V R
Sbjct: 1  MPKNKTHSGASKRFKVTGSGKLVRQQAGKRHNLEVKPTTLTRRLDGVVDVAAPDVKRVKR 60


>gi|226227283|ref|YP_002761389.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
 gi|259647409|sp|C1A494|RL35_GEMAT RecName: Full=50S ribosomal protein L35
 gi|226090474|dbj|BAH38919.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
          Length = 65

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA-RGTMVLASADAKKVI 59
          MPKMKT+S +KKRFS+T +GKVR   A K H + K S K  R+  R T+V  + +AK++ 
Sbjct: 1  MPKMKTHSGAKKRFSVTGSGKVRRLKAYKSHILTKMSGKKKRDLRRPTIVETNGEAKRIK 60

Query: 60 R 60
          R
Sbjct: 61 R 61


>gi|224510777|pdb|3FIN|8 Chain 8, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
          And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
          6.4 A Cryo-Em Map. This File Contains The 50s Subunit.
 gi|300508659|pdb|3MRZ|5 Chain 5, Recognition Of The Amber Stop Codon By Release Factor
          Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          3ms0. Molecule A In The Same Asymmetric Unit Is
          Deposited As 3mr8 (50s) And 3ms1 (30s).
 gi|300508714|pdb|3MS1|5 Chain 5, Recognition Of The Amber Stop Codon By Release Factor
          Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          3mr8. Molecule B In The Same Asymmetric Unit Is
          Deposited As 3mrz (50s) And 3ms0 (30s).
 gi|12056102|emb|CAC21225.1| ribosomal protein L35 [Thermus thermophilus]
          Length = 64

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A++ I+ 
Sbjct: 1  PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAER-IKL 59

Query: 62 YLP 64
           LP
Sbjct: 60 LLP 62


>gi|56475896|ref|YP_157485.1| 50S ribosomal protein L35 [Aromatoleum aromaticum EbN1]
 gi|81677574|sp|Q5P7X7|RL35_AZOSE RecName: Full=50S ribosomal protein L35
 gi|56311939|emb|CAI06584.1| 50S ribosomal protein L35 [Aromatoleum aromaticum EbN1]
          Length = 65

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF + A+G ++   A KRH + K++ K  R  RG   + +AD +K+IR
Sbjct: 1  MPKMKTKSGAAKRFKVRASGGIKRSQAFKRHILTKKTTKSKRQLRGMTGVHAAD-EKLIR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|258404183|ref|YP_003196925.1| 50S ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
 gi|257796410|gb|ACV67347.1| ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
          Length = 65

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T TGK+R   A +RH + K+S K  R  R   V+ SA+ K V R
Sbjct: 1  MPKMKTNKGAAKRFRTTGTGKIRRNRAFRRHILTKKSPKRKRQLRTGPVVDSANTKAVKR 60

Query: 61 NYLPNG 66
            +P G
Sbjct: 61 -LMPYG 65


>gi|220928737|ref|YP_002505646.1| ribosomal protein L35 [Clostridium cellulolyticum H10]
 gi|254802443|sp|B8I168|RL35_CLOCE RecName: Full=50S ribosomal protein L35
 gi|219999065|gb|ACL75666.1| ribosomal protein L35 [Clostridium cellulolyticum H10]
          Length = 65

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPK+KT+S+SKKRF +TATGK++   A + H +I +S K  ++ R G  V A+ +A   I
Sbjct: 1  MPKLKTHSASKKRFRVTATGKIKRGQAWRNHRLISKSRKAKKHHRLGAYVSAAQEA--TI 58

Query: 60 RNYLP 64
          +  +P
Sbjct: 59 KKLIP 63


>gi|332667069|ref|YP_004449857.1| 50S ribosomal protein L35 [Haliscomenobacter hydrossis DSM 1100]
 gi|332335883|gb|AEE52984.1| 50S ribosomal protein L35 [Haliscomenobacter hydrossis DSM 1100]
          Length = 65

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS+KKRF +T +GKV+   A   H M  +S +     R + ++  AD K+V+R
Sbjct: 1  MPKMKTHSSAKKRFKVTGSGKVKRFQANTSHLMRNKSKRAKLAHRDSTLVCEADEKRVLR 60


>gi|322812602|pdb|3PYO|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 From
          The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
          File Contains The 50s Subunit Of The First 70s
          Ribosome.
 gi|322812655|pdb|3PYR|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 From
          The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
          File Contains The 50s Subunit Of The Second 70s
          Ribosome.
 gi|322812708|pdb|3PYT|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 Of
          Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
          Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812761|pdb|3PYV|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 Of
          Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
          Contains The 50s Subunit Of The Second 70s Ribosome
          Length = 63

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A++ I+ 
Sbjct: 1  PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAER-IKL 59

Query: 62 YLP 64
           LP
Sbjct: 60 LLP 62


>gi|308176901|ref|YP_003916307.1| 50S ribosomal protein L35 [Arthrobacter arilaitensis Re117]
 gi|307744364|emb|CBT75336.1| 50S ribosomal protein L35 [Arthrobacter arilaitensis Re117]
          Length = 64

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  Q A +RH +  +S++  R      ++A AD K + R
Sbjct: 1  MPKFKTHSGAKKRFKLTGSGKLARQQANRRHYLEHKSSRVTRRLASDQIVAKADVKTIKR 60


>gi|300778188|ref|ZP_07088046.1| 50S ribosomal protein L35 [Chryseobacterium gleum ATCC 35910]
 gi|300503698|gb|EFK34838.1| 50S ribosomal protein L35 [Chryseobacterium gleum ATCC 35910]
          Length = 65

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF++T +GK++ + A K H + K+  K  RN   T  +A  D K V R
Sbjct: 1  MPKLKTKSGAKKRFALTGSGKIKRKNAYKSHILTKKETKQKRNLTTTSYVAKVDEKSVQR 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|153955809|ref|YP_001396574.1| 50S ribosomal protein L35 [Clostridium kluyveri DSM 555]
 gi|219856176|ref|YP_002473298.1| hypothetical protein CKR_2833 [Clostridium kluyveri NBRC 12016]
 gi|189042762|sp|A5N257|RL35_CLOK5 RecName: Full=50S ribosomal protein L35
 gi|254802444|sp|B9E5V9|RL35_CLOK1 RecName: Full=50S ribosomal protein L35
 gi|146348667|gb|EDK35203.1| RpmI [Clostridium kluyveri DSM 555]
 gi|219569900|dbj|BAH07884.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 65

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF +T TGK++   A K H + K+S K  RN R T    S   +KV++
Sbjct: 1  MPKMKTKKSVAKRFKLTGTGKLKRAQAFKSHILTKKSRKTKRNLRKT-AYVSETQEKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|320536885|ref|ZP_08036878.1| ribosomal protein L35 [Treponema phagedenis F0421]
 gi|320146268|gb|EFW37891.1| ribosomal protein L35 [Treponema phagedenis F0421]
          Length = 66

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMK+ S++ KRF IT +GKV+ +    RH + K+S K  RN R   +L+ AD K V +
Sbjct: 1  MAKMKSKSAAAKRFKITGSGKVKYKKMNLRHILTKKSPKRKRNLRKPGILSDADTKVVRK 60

Query: 61 NYLP 64
            LP
Sbjct: 61 KLLP 64


>gi|303257523|ref|ZP_07343535.1| ribosomal protein L35 [Burkholderiales bacterium 1_1_47]
 gi|331000212|ref|ZP_08323896.1| ribosomal protein L35 [Parasutterella excrementihominis YIT
          11859]
 gi|302859493|gb|EFL82572.1| ribosomal protein L35 [Burkholderiales bacterium 1_1_47]
 gi|329572378|gb|EGG54031.1| ribosomal protein L35 [Parasutterella excrementihominis YIT
          11859]
          Length = 65

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF + + G ++   A KRH + KR+ K  R+ RG + ++ +D KK IR
Sbjct: 1  MPKMKTKKAASKRFKVRSGGSIKRAHATKRHILTKRTTKNKRHLRGMLTISESD-KKEIR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|332830449|gb|EGK03077.1| 50S ribosomal protein L35 [Dysgonomonas gadei ATCC BAA-286]
          Length = 65

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS +KKRF++T +GK++ + A K H + K++ K  RN   + ++   D K V
Sbjct: 1  MPKMKTNSGAKKRFALTGSGKIKRKHAFKSHILTKKTKKQKRNLTHSSLVHKVDEKAV 58


>gi|307564409|ref|ZP_07626950.1| 50S ribosomal protein L35 [Prevotella amnii CRIS 21A-A]
 gi|307346769|gb|EFN92065.1| 50S ribosomal protein L35 [Prevotella amnii CRIS 21A-A]
          Length = 65

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF++T +GK++ + A   H + K++ K  RN  GT ++   + K+V
Sbjct: 1  MPKQKTNSGAKKRFTLTGSGKIKRRHAFHSHILTKKTKKQKRNLLGTTIVDKTNLKQV 58


>gi|291514675|emb|CBK63885.1| LSU ribosomal protein L35P [Alistipes shahii WAL 8301]
 gi|313157125|gb|EFR56555.1| ribosomal protein L35 [Alistipes sp. HGB5]
          Length = 64

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN+++KKRF+ T TGK++ + A   H + K++ K  RN   +  +++AD  K I+
Sbjct: 1  MPKMKTNAAAKKRFTFTGTGKIKRKHAYHSHILTKKTTKQKRNLCYSGTVSAADEAK-IK 59

Query: 61 NYL 63
          N L
Sbjct: 60 NLL 62


>gi|255659700|ref|ZP_05405109.1| ribosomal protein L35 [Mitsuokella multacida DSM 20544]
 gi|260848274|gb|EEX68281.1| ribosomal protein L35 [Mitsuokella multacida DSM 20544]
          Length = 65

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T +G+ +   A K H + K+S K  RN R   ++A AD  +V +
Sbjct: 1  MPKIKTRRAAAKRFTVTGSGEFKRNKAFKSHILEKKSPKRKRNLRKATLVAGADFGRV-K 59

Query: 61 NYLPNG 66
          N LPNG
Sbjct: 60 NMLPNG 65


>gi|237745472|ref|ZP_04575952.1| LSU ribosomal protein L35P [Oxalobacter formigenes HOxBLS]
 gi|229376823|gb|EEO26914.1| LSU ribosomal protein L35P [Oxalobacter formigenes HOxBLS]
          Length = 65

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG   + ++D   V+R
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKCAQAFKRHILTKKTTKVKRQLRGMTNVNASDVSSVLR 60


>gi|163839502|ref|YP_001623907.1| 50S ribosomal protein L35 [Renibacterium salmoninarum ATCC 33209]
 gi|189042781|sp|A9WQB0|RL35_RENSM RecName: Full=50S ribosomal protein L35
 gi|162952978|gb|ABY22493.1| LSU ribosomal protein L35P [Renibacterium salmoninarum ATCC
          33209]
          Length = 64

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF +T +GK++ Q A +RH +  + +   R       ++ ADAK +
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKLKRQQANRRHYLEHKPSTLTRRLAADKTVSPADAKNI 58


>gi|296133379|ref|YP_003640626.1| ribosomal protein L35 [Thermincola sp. JR]
 gi|296031957|gb|ADG82725.1| ribosomal protein L35 [Thermincola potens JR]
          Length = 65

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF +T +GKV+   A K H + K+S K  RN R   ++++AD KKV
Sbjct: 1  MPKMKTHRGAAKRFKVTGSGKVKKAKAYKSHILEKKSAKRKRNLRQPGLVSAADTKKV 58


>gi|326201564|ref|ZP_08191435.1| ribosomal protein L35 [Clostridium papyrosolvens DSM 2782]
 gi|325988164|gb|EGD48989.1| ribosomal protein L35 [Clostridium papyrosolvens DSM 2782]
          Length = 65

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPK+KT+S+SKKRF +TATGK++   A + H ++ +S K  ++ R G  V A+ +A   I
Sbjct: 1  MPKLKTHSASKKRFRVTATGKIKRGQAWRNHRLVSKSRKAKKHHRLGAYVSAAQEA--TI 58

Query: 60 RNYLP 64
          +  +P
Sbjct: 59 KKLIP 63


>gi|221134664|ref|ZP_03560967.1| ribosomal protein L35 [Glaciecola sp. HTCC2999]
          Length = 65

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRF  TA+G+ +++ +  RH + K+S K  R+ RG  ++  +D  K+I+
Sbjct: 1  MPKMKSNSGAAKRFRKTASGRFKSKQSHLRHILTKKSTKRKRHLRGKKLVHDSDT-KLIQ 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|261880446|ref|ZP_06006873.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332869|gb|EFA43655.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 65

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNSS+KKRF  T TGK++ + A   H + K++ K  RN   T ++  ++ K+V
Sbjct: 1  MPKLKTNSSAKKRFRFTGTGKIKRKHAYHSHILTKKTKKQKRNLCQTTLVDKSNLKQV 58


>gi|307718472|ref|YP_003874004.1| 50S ribosomal protein L35 [Spirochaeta thermophila DSM 6192]
 gi|306532197|gb|ADN01731.1| 50S ribosomal protein L35 [Spirochaeta thermophila DSM 6192]
 gi|315187010|gb|EFU20767.1| LSU ribosomal protein L35P [Spirochaeta thermophila DSM 6578]
          Length = 65

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRFSITA GKV+ +    RH + K++ K  R+ R    L   + K+V R
Sbjct: 1  MPKMKTRKSAAKRFSITARGKVKYKKQNLRHILTKKAQKRKRHLRKPGHLPKMEEKRVKR 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 -LLPYG 65


>gi|323702721|ref|ZP_08114382.1| ribosomal protein L35 [Desulfotomaculum nigrificans DSM 574]
 gi|323532384|gb|EGB22262.1| ribosomal protein L35 [Desulfotomaculum nigrificans DSM 574]
          Length = 64

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TA+GK+R   A   H + K++ K  RN R ++++A ADA + +R
Sbjct: 1  MPKIKTHRGAAKRFKKTASGKIRGWHAFHSHILGKKTAKRKRNLRKSLIIAEADAGR-LR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|152967112|ref|YP_001362896.1| ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
 gi|189042773|sp|A6WCU3|RL35_KINRD RecName: Full=50S ribosomal protein L35
 gi|151361629|gb|ABS04632.1| ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
          Length = 64

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF IT +GKV  + A KRH +  +S+K  R      V++ AD KK+
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANKRHLLEVKSSKRTRRLSVDQVVSPADVKKI 58


>gi|54023883|ref|YP_118125.1| 50S ribosomal protein L35 [Nocardia farcinica IFM 10152]
 gi|81680171|sp|Q5YYI0|RL35_NOCFA RecName: Full=50S ribosomal protein L35
 gi|54015391|dbj|BAD56761.1| putative ribosomal protein L35 [Nocardia farcinica IFM 10152]
          Length = 64

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++S + KRF ++  GK+  Q A +RH +  + ++  R   GT V+A+AD ++V
Sbjct: 1  MPKMKSHSGASKRFKVSGKGKLLRQQANRRHLLEHKPSRRTRRLDGTEVVAAADVRRV 58


>gi|218960857|ref|YP_001740632.1| 50S ribosomal protein L35 [Candidatus Cloacamonas
          acidaminovorans]
 gi|167729514|emb|CAO80425.1| 50S ribosomal protein L35 [Candidatus Cloacamonas
          acidaminovorans]
          Length = 80

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+ KRF IT TGK+    A   H   K++ K  R  RG+ ++   D K++ R
Sbjct: 17 MPKLKTNRSAAKRFKITGTGKIVRHHAKSAHIKTKKAPKLKRYLRGSEIVKKPDEKRIYR 76


>gi|160878606|ref|YP_001557574.1| ribosomal protein L35 [Clostridium phytofermentans ISDg]
 gi|189042763|sp|A9KHG8|RL35_CLOPH RecName: Full=50S ribosomal protein L35
 gi|160427272|gb|ABX40835.1| ribosomal protein L35 [Clostridium phytofermentans ISDg]
          Length = 65

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT+ ++ KRF +T TGK++   AGK+H + K+S K  RN R   ++  ++ K  K 
Sbjct: 1  MPKLKTSKAAAKRFKVTGTGKLKRMKAGKQHILTKKSQKTKRNLRKATMMDPSNEKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|227537391|ref|ZP_03967440.1| ribosomal protein L35 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772850|ref|ZP_07082719.1| 50S ribosomal protein L35 [Sphingobacterium spiritivorum ATCC
          33861]
 gi|227242769|gb|EEI92784.1| ribosomal protein L35 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300759021|gb|EFK55848.1| 50S ribosomal protein L35 [Sphingobacterium spiritivorum ATCC
          33861]
          Length = 66

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T TGK+  + A K H + K+S K  RN   T  ++  D   V R
Sbjct: 1  MPKVKTNSSAKKRFKLTGTGKIARKNAFKSHILTKKSTKRKRNLTQTSYVSDGDMGNVKR 60


>gi|303237305|ref|ZP_07323875.1| ribosomal protein L35 [Prevotella disiens FB035-09AN]
 gi|302482692|gb|EFL45717.1| ribosomal protein L35 [Prevotella disiens FB035-09AN]
          Length = 65

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRFS T TGKV+   A   H + K++ K  RN   T ++ S++ K+V
Sbjct: 1  MPKQKTNSGAKKRFSFTGTGKVKRNRAYHSHILTKKTKKQKRNLVHTALVDSSNMKQV 58


>gi|111017976|ref|YP_700948.1| 50S ribosomal protein L35 [Rhodococcus jostii RHA1]
 gi|226360107|ref|YP_002777885.1| 50S ribosomal protein L35 [Rhodococcus opacus B4]
 gi|118573019|sp|Q0SI46|RL35_RHOSR RecName: Full=50S ribosomal protein L35
 gi|254802467|sp|C1AT08|RL35_RHOOB RecName: Full=50S ribosomal protein L35
 gi|110817506|gb|ABG92790.1| 50S ribosomal protein L35 [Rhodococcus jostii RHA1]
 gi|226238592|dbj|BAH48940.1| 50S ribosomal protein L35 [Rhodococcus opacus B4]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF ++ +GK+  Q AG+RH +  ++ K  R   G  V++ AD  ++ R
Sbjct: 1  MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKATKVTRRLDGVAVVSKADTPRIKR 60


>gi|317507014|ref|ZP_07964781.1| ribosomal protein L35 [Segniliparus rugosus ATCC BAA-974]
 gi|316254698|gb|EFV14001.1| ribosomal protein L35 [Segniliparus rugosus ATCC BAA-974]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KR  +T +GK+R Q  GKRH +  +     R   GT  +A  D K++
Sbjct: 1  MPKNKTHSGASKRIKVTGSGKLRRQKCGKRHNLEVKPTNLTRRLDGTAAVARPDVKRI 58


>gi|312886255|ref|ZP_07745869.1| LSU ribosomal protein L35P [Mucilaginibacter paludis DSM 18603]
 gi|311301280|gb|EFQ78335.1| LSU ribosomal protein L35P [Mucilaginibacter paludis DSM 18603]
          Length = 85

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRF +T TGK+  + A K H + K S K  R    T +++ AD   V R
Sbjct: 20 MPKMKTNSSAKKRFKLTGTGKITRKNAYKSHILTKMSTKRKRALGHTSLVSDADLGNVKR 79


>gi|21220096|ref|NP_625875.1| 50S ribosomal protein L35 [Streptomyces coelicolor A3(2)]
 gi|239932315|ref|ZP_04689268.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
 gi|256788791|ref|ZP_05527222.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|289772686|ref|ZP_06532064.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|291440679|ref|ZP_06580069.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
 gi|297198453|ref|ZP_06915850.1| ribosomal protein L35 [Streptomyces sviceus ATCC 29083]
 gi|7674316|sp|O88059|RL35_STRCO RecName: Full=50S ribosomal protein L35
 gi|3581854|emb|CAA20810.1| 50S ribosomal protein L35 [Streptomyces coelicolor A3(2)]
 gi|197716143|gb|EDY60177.1| ribosomal protein L35 [Streptomyces sviceus ATCC 29083]
 gi|289702885|gb|EFD70314.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|291343574|gb|EFE70530.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   G   +A  DA K+
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAAKI 58


>gi|309811038|ref|ZP_07704836.1| ribosomal protein L35 [Dermacoccus sp. Ellin185]
 gi|308435002|gb|EFP58836.1| ribosomal protein L35 [Dermacoccus sp. Ellin185]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T  GK+  Q A   H   +R+ +  R     +VLA AD KK+ R
Sbjct: 1  MPKMKTHSGAKKRFRVTGKGKIMRQRARHVHKFEERAKRQSRRLVNDVVLAPADEKKIKR 60


>gi|88800313|ref|ZP_01115879.1| ribosomal protein L35 [Reinekea sp. MED297]
 gi|88776890|gb|EAR08099.1| ribosomal protein L35 [Reinekea sp. MED297]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS +KKRF  TA G  + + + + H + K+S+K IR  RG + +A AD K +++
Sbjct: 1  MPKMKSNSGAKKRFKRTANG-FKHKQSFRSHILTKKSSKRIRQLRGMLQVADAD-KPLVK 58

Query: 61 NYLP 64
            LP
Sbjct: 59 RMLP 62


>gi|325288437|ref|YP_004264618.1| LSU ribosomal protein L35P [Syntrophobotulus glycolicus DSM 8271]
 gi|324963838|gb|ADY54617.1| LSU ribosomal protein L35P [Syntrophobotulus glycolicus DSM 8271]
          Length = 65

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+    A KRH + K+S K  RN R + ++   DAK++ R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIVRAHAYKRHILEKKSPKRKRNLRKSTIMHKTDAKRIER 60


>gi|325279135|ref|YP_004251677.1| 50S ribosomal protein L35 [Odoribacter splanchnicus DSM 20712]
 gi|324310944|gb|ADY31497.1| 50S ribosomal protein L35 [Odoribacter splanchnicus DSM 20712]
          Length = 64

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKT SS+KKRF++TATGK++ + A K H + K++ K  RN
Sbjct: 1  MPKMKTVSSAKKRFTLTATGKIKRKHAFKSHILTKKTTKQKRN 43


>gi|315604406|ref|ZP_07879472.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
          F0310]
 gi|320093954|ref|ZP_08025783.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
          F0338]
 gi|315314112|gb|EFU62163.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
          F0310]
 gi|319979112|gb|EFW10626.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
          F0338]
          Length = 64

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF  T +GK+  + AG RH +  +S++  R      VL +AD K+V R
Sbjct: 1  MPKNKTHSGAKKRFRTTGSGKIMREQAGARHLLEHKSSRKTRRLATDQVLETADVKRVKR 60


>gi|296140119|ref|YP_003647362.1| ribosomal protein L35 [Tsukamurella paurometabola DSM 20162]
 gi|296028253|gb|ADG79023.1| ribosomal protein L35 [Tsukamurella paurometabola DSM 20162]
          Length = 64

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF I+ +GKV  Q AG+RH +  +S++  R   G   +A AD ++V
Sbjct: 1  MPKNKSHSGTAKRFKISGSGKVLRQKAGRRHLLEHKSSRVTRRLDGVAEVAPADVRRV 58


>gi|154509024|ref|ZP_02044666.1| hypothetical protein ACTODO_01541 [Actinomyces odontolyticus ATCC
          17982]
 gi|293192346|ref|ZP_06609457.1| ribosomal protein L35 [Actinomyces odontolyticus F0309]
 gi|153798658|gb|EDN81078.1| hypothetical protein ACTODO_01541 [Actinomyces odontolyticus ATCC
          17982]
 gi|292820261|gb|EFF79255.1| ribosomal protein L35 [Actinomyces odontolyticus F0309]
          Length = 64

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF  T +GK+  + AG RH +  +S++  R      VL +AD K+V R
Sbjct: 1  MPKNKTHSGAKKRFRTTGSGKIMREQAGARHLLEHKSSRKTRRLATDQVLETADVKRVKR 60


>gi|330995387|ref|ZP_08319297.1| ribosomal protein L35 [Paraprevotella xylaniphila YIT 11841]
 gi|329575882|gb|EGG57406.1| ribosomal protein L35 [Paraprevotella xylaniphila YIT 11841]
          Length = 65

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF +T TGK++   A  RH + K++ K  RN     ++ + + K+V
Sbjct: 1  MPKVKTNSGAKKRFRLTGTGKIKRHHAFHRHILTKKTTKQKRNLVHDDIVVTDNMKQV 58


>gi|210632540|ref|ZP_03297450.1| hypothetical protein COLSTE_01353 [Collinsella stercoris DSM
          13279]
 gi|210159487|gb|EEA90458.1| hypothetical protein COLSTE_01353 [Collinsella stercoris DSM
          13279]
          Length = 65

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+S SKKRF  + TGK+    A K H + K+S K  R  R    LA+ADAK
Sbjct: 1  MPKMKTHSGSKKRFRRSGTGKIMRAKAYKSHILTKKSTKRKRGFRQETELAAADAK 56


>gi|256822930|ref|YP_003146893.1| 50S ribosomal protein L35 [Kangiella koreensis DSM 16069]
 gi|256796469|gb|ACV27125.1| ribosomal protein L35 [Kangiella koreensis DSM 16069]
          Length = 65

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA+G+ + + +  RH + K+S K  R+ R   ++ +AD + + R
Sbjct: 1  MPKMKTDRGASKRFKKTASGRYKHKQSHLRHILTKKSTKRKRHLRHAKLVDAADTRSIDR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -MLPNG 65


>gi|288928015|ref|ZP_06421862.1| ribosomal protein L35 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330849|gb|EFC69433.1| ribosomal protein L35 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 65

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF  T TGKV+ + A   H + K++ K  RN   + ++  AD K+V
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKVKRKHAYHSHILTKKTKKQKRNLVHSTLVDRADMKQV 58


>gi|296270014|ref|YP_003652646.1| 50S ribosomal protein L35 [Thermobispora bispora DSM 43833]
 gi|296092801|gb|ADG88753.1| ribosomal protein L35 [Thermobispora bispora DSM 43833]
          Length = 64

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF +T +GK+  + A ++H    + +   R  +G +V+++AD KKV
Sbjct: 1  MPKMKTHSGAKKRFRLTGSGKIIRRRANRQHLFEHKPSTRTRRLQGVVVVSAADTKKV 58


>gi|289449835|ref|YP_003475580.1| 50S ribosomal protein L35 [Clostridiales genomosp. BVAB3 str.
          UPII9-5]
 gi|289184382|gb|ADC90807.1| ribosomal protein L35 [Clostridiales genomosp. BVAB3 str.
          UPII9-5]
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 36/54 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK KT+SSSKKRF I+ TGKV    A K+H +  ++ K  RN RG+ + + A+
Sbjct: 1  MPKQKTHSSSKKRFKISGTGKVIRPRAFKKHKLTCKTAKQKRNLRGSTIASPAN 54


>gi|229816630|ref|ZP_04446919.1| hypothetical protein COLINT_03678 [Collinsella intestinalis DSM
          13280]
 gi|229807758|gb|EEP43571.1| hypothetical protein COLINT_03678 [Collinsella intestinalis DSM
          13280]
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+S SKKRF  + TGK+    A K H + K+S K  R  R    LA+ADAK
Sbjct: 1  MPKMKTHSGSKKRFRRSGTGKIMRAKAYKSHILTKKSTKRKRGFRQEAELAAADAK 56


>gi|332670157|ref|YP_004453165.1| 50S ribosomal protein L35 [Cellulomonas fimi ATCC 484]
 gi|332339195|gb|AEE45778.1| ribosomal protein L35 [Cellulomonas fimi ATCC 484]
          Length = 64

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF IT +GKV  + A  RH +  +S++  R   G +V+++AD  K+
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANGRHLLEHKSSRRTRRIAGDVVVSAADTPKI 58


>gi|282881465|ref|ZP_06290139.1| ribosomal protein L35 [Prevotella timonensis CRIS 5C-B1]
 gi|281304691|gb|EFA96777.1| ribosomal protein L35 [Prevotella timonensis CRIS 5C-B1]
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRFS T TGK++   A   H + K++ K  RN  G  ++  ++ K+V
Sbjct: 1  MPKQKTNSGAKKRFSFTGTGKIKRNHAYHSHILTKKTKKQKRNLVGYTLVDKSNLKQV 58


>gi|162455528|ref|YP_001617895.1| 50S ribosomal protein L35 [Sorangium cellulosum 'So ce 56']
 gi|189042790|sp|A9ESS9|RL35_SORC5 RecName: Full=50S ribosomal protein L35
 gi|161166110|emb|CAN97415.1| 50S ribosomal protein L35 [Sorangium cellulosum 'So ce 56']
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF +T +G++R    G  H M ++S K +R  R   ++ SA  K+V +
Sbjct: 1  MPKMKTNRAAAKRFKVTGSGRIRRSKGGLNHCMQEKSKKRLRRLRKNDMVDSAMEKRV-K 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LLLPYG 65


>gi|29345834|ref|NP_809337.1| 50S ribosomal protein L35 [Bacteroides thetaiotaomicron VPI-5482]
 gi|160883806|ref|ZP_02064809.1| hypothetical protein BACOVA_01778 [Bacteroides ovatus ATCC 8483]
 gi|253567821|ref|ZP_04845232.1| 50S ribosomal protein L35 [Bacteroides sp. 1_1_6]
 gi|255008479|ref|ZP_05280605.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
 gi|260170788|ref|ZP_05757200.1| 50S ribosomal protein L35 [Bacteroides sp. D2]
 gi|298384718|ref|ZP_06994278.1| ribosomal protein L35 [Bacteroides sp. 1_1_14]
 gi|299149168|ref|ZP_07042229.1| ribosomal protein L35 [Bacteroides sp. 3_1_23]
 gi|313146207|ref|ZP_07808400.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
 gi|54036307|sp|Q8AAP0|RL35_BACTN RecName: Full=50S ribosomal protein L35
 gi|29337727|gb|AAO75531.1| 50S ribosomal protein L35 [Bacteroides thetaiotaomicron VPI-5482]
 gi|156110891|gb|EDO12636.1| hypothetical protein BACOVA_01778 [Bacteroides ovatus ATCC 8483]
 gi|251841894|gb|EES69974.1| 50S ribosomal protein L35 [Bacteroides sp. 1_1_6]
 gi|298262997|gb|EFI05861.1| ribosomal protein L35 [Bacteroides sp. 1_1_14]
 gi|298512835|gb|EFI36723.1| ribosomal protein L35 [Bacteroides sp. 3_1_23]
 gi|313134974|gb|EFR52334.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS SKKRF++T TGK++ + A   H + K+S K  RN   +  + + +  +V
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKSKKRKRNLCYSTTVDTTNVSQV 58


>gi|302386671|ref|YP_003822493.1| ribosomal protein L35 [Clostridium saccharolyticum WM1]
 gi|302197299|gb|ADL04870.1| ribosomal protein L35 [Clostridium saccharolyticum WM1]
          Length = 65

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ S+ KRF +T TGK+    A K H + K+S K  RN R  +V  + +A KV++
Sbjct: 1  MPKLKTSKSAAKRFKVTGTGKLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNA-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|237747669|ref|ZP_04578149.1| 50S ribosomal subunit protein A [Oxalobacter formigenes OXCC13]
 gi|229379031|gb|EEO29122.1| 50S ribosomal subunit protein A [Oxalobacter formigenes OXCC13]
          Length = 73

 Score = 47.4 bits (111), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG   + ++D   V+R
Sbjct: 9  MPKMKTKSSAKKRFRVRPGGTVKCGQAFKRHILTKKTTKAKRQLRGATNVNASDVSSVLR 68


>gi|256832336|ref|YP_003161063.1| 50S ribosomal protein L35 [Jonesia denitrificans DSM 20603]
 gi|256685867|gb|ACV08760.1| ribosomal protein L35 [Jonesia denitrificans DSM 20603]
          Length = 64

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S+   R      V++ AD KK+
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKIMREQANKRHLLEHKSSTRTRRLSSDQVVSDADVKKI 58


>gi|328944549|ref|ZP_08242010.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Atopobium
          vaginae DSM 15829]
 gi|327490950|gb|EGF22728.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Atopobium
          vaginae DSM 15829]
          Length = 64

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   +++SADA+ V
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKETLVSSADAQVV 58


>gi|302561589|ref|ZP_07313931.1| 50S ribosomal protein L35 [Streptomyces griseoflavus Tu4000]
 gi|302479207|gb|EFL42300.1| 50S ribosomal protein L35 [Streptomyces griseoflavus Tu4000]
          Length = 64

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DA K+
Sbjct: 1  MPKNKSHSGASKRFKVTGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAAKI 58


>gi|330836893|ref|YP_004411534.1| 50S ribosomal protein L35P [Spirochaeta coccoides DSM 17374]
 gi|329748796|gb|AEC02152.1| LSU ribosomal protein L35P [Spirochaeta coccoides DSM 17374]
          Length = 65

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KR+ +T +GK+R +  G RH + K+S+K  R  R + +L  ++  +V R
Sbjct: 1  MPKMKTRKAAAKRYKVTGSGKIRYKKQGLRHILTKKSSKRKRQLRASGLLHESEVARV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 VLLP 63


>gi|282859090|ref|ZP_06268221.1| ribosomal protein L35 [Prevotella bivia JCVIHMP010]
 gi|282588120|gb|EFB93294.1| ribosomal protein L35 [Prevotella bivia JCVIHMP010]
          Length = 65

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF+ T +GK++ + A   H + K++ K  RN  GT ++   + K+V
Sbjct: 1  MPKQKTNSGAKKRFTFTGSGKIKRRHAFHSHILTKKTKKQKRNLVGTTLVDQTNLKQV 58


>gi|251772032|gb|EES52604.1| Ribosomal protein L35 [Leptospirillum ferrodiazotrophum]
          Length = 66

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          +KT  ++KKRFS+T TGKV+   +GKRH M  +S+K  R+   T +L    AKKV+ N 
Sbjct: 7  LKTKRAAKKRFSLTGTGKVKFHQSGKRHLMTGKSSKRTRSL-STSILEKGQAKKVLANL 64


>gi|327402298|ref|YP_004343136.1| 50S ribosomal protein L35P [Fluviicola taffensis DSM 16823]
 gi|327317806|gb|AEA42298.1| LSU ribosomal protein L35P [Fluviicola taffensis DSM 16823]
          Length = 65

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF++T +GK++ + A K H + K++ K  RN     ++  AD   V
Sbjct: 1  MPKMKTTSSAKKRFTVTGSGKIKRKHAFKSHILTKKTKKQKRNLTHAGLVHQADLSNV 58


>gi|86741867|ref|YP_482267.1| 50S ribosomal protein L35 [Frankia sp. CcI3]
 gi|124078994|sp|Q2J854|RL35_FRASC RecName: Full=50S ribosomal protein L35
 gi|86568729|gb|ABD12538.1| LSU ribosomal protein L35P [Frankia sp. CcI3]
          Length = 64

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF +T +GKV  Q A +RH +  ++++  R   G + L  AD ++V R
Sbjct: 1  MPKQKSHSGASKRFRVTGSGKVLRQRANRRHYLEHKTSRLTRRLDGVVPLTKADNRRVKR 60


>gi|296129472|ref|YP_003636722.1| ribosomal protein L35 [Cellulomonas flavigena DSM 20109]
 gi|296021287|gb|ADG74523.1| ribosomal protein L35 [Cellulomonas flavigena DSM 20109]
          Length = 64

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T TGKV  + A  RH +  +S++  R   G +V++ AD  ++
Sbjct: 1  MPKNKTHSGAKKRFRVTGTGKVMREQANGRHLLEHKSSRRTRRIAGDVVVSPADTPRI 58


>gi|260424666|ref|ZP_05732873.2| ribosomal protein L35 [Dialister invisus DSM 15470]
 gi|260402755|gb|EEW96302.1| ribosomal protein L35 [Dialister invisus DSM 15470]
          Length = 67

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF+ T +G+ +   A K H + K+S K  RN R   +++ +D K+V R
Sbjct: 3  MPKMKTRRAAAKRFTETGSGQFKRNKAFKSHILEKKSPKRKRNFRKAALVSKSDYKRVAR 62

Query: 61 NYLPNG 66
            LPNG
Sbjct: 63 -LLPNG 67


>gi|50955433|ref|YP_062721.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str.
          CTCB07]
 gi|81692587|sp|Q6ADC8|RL35_LEIXX RecName: Full=50S ribosomal protein L35
 gi|50951915|gb|AAT89616.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str.
          CTCB07]
          Length = 64

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  Q AG RH +  + +   R      V+   DAK V R
Sbjct: 1  MPKQKTHSGAKKRFKITGSGKVMKQQAGMRHNLEVKGSDRKRRLNADQVVPEVDAKFVRR 60


>gi|254821221|ref|ZP_05226222.1| 50S ribosomal protein L35 [Mycobacterium intracellulare ATCC
          13950]
          Length = 64

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  +  K  R   G  V+A+ DA+++  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTVVAANDAQRI-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NRLLNG 64


>gi|288924996|ref|ZP_06418932.1| ribosomal protein L35 [Prevotella buccae D17]
 gi|315608032|ref|ZP_07883025.1| 50S ribosomal protein L35 [Prevotella buccae ATCC 33574]
 gi|288338186|gb|EFC76536.1| ribosomal protein L35 [Prevotella buccae D17]
 gi|315250501|gb|EFU30497.1| 50S ribosomal protein L35 [Prevotella buccae ATCC 33574]
          Length = 65

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNSS+KKRFS T TGK++   A   H + K++ K  RN     ++   + K+V
Sbjct: 1  MPKVKTNSSAKKRFSFTGTGKIKRHHAFHSHILTKKTKKQKRNLVHDTLVDRTNLKQV 58


>gi|322383963|ref|ZP_08057693.1| 50S ribosomal protein L35-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
 gi|321151440|gb|EFX44627.1| 50S ribosomal protein L35-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
          Length = 66

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A  D K++
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNHLLSHKSGRQKRVLEGQPIMAPGDVKRL 58


>gi|53712978|ref|YP_098970.1| 50S ribosomal protein L35 [Bacteroides fragilis YCH46]
 gi|60681190|ref|YP_211334.1| 50S ribosomal protein L35 [Bacteroides fragilis NCTC 9343]
 gi|253563044|ref|ZP_04840501.1| 50S ribosomal protein L35 [Bacteroides sp. 3_2_5]
 gi|265763075|ref|ZP_06091643.1| ribosomal protein L35 [Bacteroides sp. 2_1_16]
 gi|81315741|sp|Q5LEQ4|RL35_BACFN RecName: Full=50S ribosomal protein L35
 gi|81690704|sp|Q64VP0|RL35_BACFR RecName: Full=50S ribosomal protein L35
 gi|52215843|dbj|BAD48436.1| 50S ribosomal protein L35 [Bacteroides fragilis YCH46]
 gi|60492624|emb|CAH07396.1| putative 50S ribosomal protein L35 [Bacteroides fragilis NCTC
          9343]
 gi|251946820|gb|EES87102.1| 50S ribosomal protein L35 [Bacteroides sp. 3_2_5]
 gi|263255683|gb|EEZ27029.1| ribosomal protein L35 [Bacteroides sp. 2_1_16]
 gi|301162679|emb|CBW22226.1| putative 50S ribosomal protein L35 [Bacteroides fragilis 638R]
          Length = 65

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKTNS SKKRF++T TGK++ + A   H + K+S K  RN
Sbjct: 1  MPKMKTNSGSKKRFALTGTGKIKRKHAFHSHILTKKSKKRKRN 43


>gi|255326344|ref|ZP_05367428.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
 gi|300744015|ref|ZP_07073035.1| ribosomal protein L35 [Rothia dentocariosa M567]
 gi|255296561|gb|EET75894.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
 gi|300380376|gb|EFJ76939.1| ribosomal protein L35 [Rothia dentocariosa M567]
          Length = 64

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GKV+ Q A +RH +  +S++  R      ++    AK V
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVV 58


>gi|212691284|ref|ZP_03299412.1| hypothetical protein BACDOR_00775 [Bacteroides dorei DSM 17855]
 gi|237712287|ref|ZP_04542768.1| ribosomal protein L35 [Bacteroides sp. 9_1_42FAA]
 gi|237726426|ref|ZP_04556907.1| ribosomal protein L35 [Bacteroides sp. D4]
 gi|254881562|ref|ZP_05254272.1| ribosomal protein L35 [Bacteroides sp. 4_3_47FAA]
 gi|265751995|ref|ZP_06087788.1| 50S ribosomal protein L35 [Bacteroides sp. 3_1_33FAA]
 gi|319642946|ref|ZP_07997582.1| hypothetical protein HMPREF9011_03183 [Bacteroides sp. 3_1_40A]
 gi|212666516|gb|EEB27088.1| hypothetical protein BACDOR_00775 [Bacteroides dorei DSM 17855]
 gi|229434952|gb|EEO45029.1| ribosomal protein L35 [Bacteroides dorei 5_1_36/D4]
 gi|229453608|gb|EEO59329.1| ribosomal protein L35 [Bacteroides sp. 9_1_42FAA]
 gi|254834355|gb|EET14664.1| ribosomal protein L35 [Bacteroides sp. 4_3_47FAA]
 gi|263236787|gb|EEZ22257.1| 50S ribosomal protein L35 [Bacteroides sp. 3_1_33FAA]
 gi|317385494|gb|EFV66437.1| hypothetical protein HMPREF9011_03183 [Bacteroides sp. 3_1_40A]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS SKKRF +T TGK++ + A   H + K++ K  RN   + ++A+A+  +V
Sbjct: 1  MPKIKTNSGSKKRFVLTGTGKIKRKHAFHSHILTKKTKKQKRNLVHSGLVANANLDQV 58


>gi|295107329|emb|CBL04872.1| LSU ribosomal protein L35P [Gordonibacter pamelaeae 7-10-1-b]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK+    A K H M K+S K  RN R    ++ AD K V R
Sbjct: 1  MPKMKTHRGTAKRFRVTGSGKIMRSKAYKSHIMTKKSQKRKRNFRHETEVSKADQKTVAR 60


>gi|283458460|ref|YP_003363086.1| 50S ribosomal protein L35 [Rothia mucilaginosa DY-18]
 gi|311113267|ref|YP_003984489.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
 gi|283134501|dbj|BAI65266.1| ribosomal protein L35 [Rothia mucilaginosa DY-18]
 gi|310944761|gb|ADP41055.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
          Length = 72

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GKV+ Q A +RH +  +S++  R      ++    AK V
Sbjct: 9  MPKQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVV 66


>gi|303232509|ref|ZP_07319196.1| ribosomal protein L35 [Atopobium vaginae PB189-T1-4]
 gi|302481393|gb|EFL44466.1| ribosomal protein L35 [Atopobium vaginae PB189-T1-4]
          Length = 64

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL +AD+  V
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLTAADSHNV 58


>gi|297626569|ref|YP_003688332.1| 50S ribosomal protein L35 [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
 gi|296922334|emb|CBL56906.1| 50S ribosomal protein L35 [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
          Length = 64

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF IT TGKV    AGK H    +  K  R      VL   DAKK 
Sbjct: 1  MPKMKTHSGAKKRFRITGTGKVMHARAGKAHLNEHKPTKQTRRLGQDAVLTKPDAKKA 58


>gi|218130017|ref|ZP_03458821.1| hypothetical protein BACEGG_01600 [Bacteroides eggerthii DSM
          20697]
 gi|317476768|ref|ZP_07936011.1| ribosomal protein L35 [Bacteroides eggerthii 1_2_48FAA]
 gi|217987820|gb|EEC54146.1| hypothetical protein BACEGG_01600 [Bacteroides eggerthii DSM
          20697]
 gi|316906943|gb|EFV28654.1| ribosomal protein L35 [Bacteroides eggerthii 1_2_48FAA]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRN 43


>gi|189466354|ref|ZP_03015139.1| hypothetical protein BACINT_02729 [Bacteroides intestinalis DSM
          17393]
 gi|224539837|ref|ZP_03680376.1| hypothetical protein BACCELL_04747 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|189434618|gb|EDV03603.1| hypothetical protein BACINT_02729 [Bacteroides intestinalis DSM
          17393]
 gi|224518547|gb|EEF87652.1| hypothetical protein BACCELL_04747 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRN 43


>gi|261749264|ref|YP_003256949.1| 50S ribosomal protein L35 [Blattabacterium sp. (Periplaneta
          americana) str. BPLAN]
 gi|261497356|gb|ACX83806.1| ribosomal protein L35 [Blattabacterium sp. (Periplaneta
          americana) str. BPLAN]
          Length = 62

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S SKKRF  TA G+++ + A K H + K+S K  R+     +L S+D K + +
Sbjct: 1  MPKLKTKSGSKKRFKKTANGRIKKKQAFKNHLLTKKSKKRKRHLSKFSLLKSSDKKNIKK 60

Query: 61 NY 62
           +
Sbjct: 61 QF 62


>gi|332798666|ref|YP_004460165.1| 50S ribosomal protein L35 [Tepidanaerobacter sp. Re1]
 gi|332696401|gb|AEE90858.1| 50S ribosomal protein L35 [Tepidanaerobacter sp. Re1]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T TGK++   A K H + K+++K  R+ R   +L+ AD K+ I+
Sbjct: 1  MPKVKTHRGAAKRFKVTKTGKIKRSKAYKSHILTKKTSKRKRHLRKPAILSKADHKR-IK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 QVIP 63


>gi|281420275|ref|ZP_06251274.1| ribosomal protein L35 [Prevotella copri DSM 18205]
 gi|281405770|gb|EFB36450.1| ribosomal protein L35 [Prevotella copri DSM 18205]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF  T TGK++   A   H + K++ K  RN  G  ++  ++ K+V
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRHHAFHSHILTKKTKKQKRNLLGETLVDRSNLKQV 58


>gi|189461812|ref|ZP_03010597.1| hypothetical protein BACCOP_02478 [Bacteroides coprocola DSM
          17136]
 gi|189431406|gb|EDV00391.1| hypothetical protein BACCOP_02478 [Bacteroides coprocola DSM
          17136]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++ SA+  +V
Sbjct: 1  MPKVKTNSGSKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRNLVHSGLVHSANLAQV 58


>gi|161486579|ref|NP_787293.2| 50S ribosomal protein L35 [Tropheryma whipplei str. Twist]
 gi|161501888|ref|NP_789534.2| 50S ribosomal protein L35 [Tropheryma whipplei TW08/27]
          Length = 64

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+S +KKRF +T +G V    AG RH    RS++  R   G   ++ AD+K
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGSVSRARAGMRHNFEHRSSRVTRRLTGRQFVSDADSK 56


>gi|167763513|ref|ZP_02435640.1| hypothetical protein BACSTE_01887 [Bacteroides stercoris ATCC
          43183]
 gi|167698807|gb|EDS15386.1| hypothetical protein BACSTE_01887 [Bacteroides stercoris ATCC
          43183]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRN 43


>gi|86147530|ref|ZP_01065841.1| 50S ribosomal protein L35 [Vibrio sp. MED222]
 gi|148982344|ref|ZP_01816721.1| 50S ribosomal protein L35 [Vibrionales bacterium SWAT-3]
 gi|218709223|ref|YP_002416844.1| 50S ribosomal protein L35 [Vibrio splendidus LGP32]
 gi|254803583|sp|B7VN19|RL35_VIBSL RecName: Full=50S ribosomal protein L35
 gi|85834698|gb|EAQ52845.1| 50S ribosomal protein L35 [Vibrio sp. MED222]
 gi|145960524|gb|EDK25887.1| 50S ribosomal protein L35 [Vibrionales bacterium SWAT-3]
 gi|218322242|emb|CAV18360.1| 50S ribosomal protein L35 [Vibrio splendidus LGP32]
          Length = 64

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + AGKRH + KR+ K  R  R   +L   +  +V+R
Sbjct: 1  MPKMKTNKGAAKRFQKTAGG-IKFKHAGKRHILTKRTTKNKRQLRPNSILPKCEVAQVLR 59


>gi|292670654|ref|ZP_06604080.1| 50S ribosomal protein L35 [Selenomonas noxia ATCC 43541]
 gi|292647681|gb|EFF65653.1| 50S ribosomal protein L35 [Selenomonas noxia ATCC 43541]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS+T +G+ R   A KRH + K++ K  RN R   +  ++D K+ IR
Sbjct: 1  MPKIKTRRAAAKRFSVTGSGEFRRNKAYKRHILEKKTPKRKRNLRKAALADTSDYKR-IR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KMLP 63


>gi|332981195|ref|YP_004462636.1| 50S ribosomal protein L35P [Mahella australiensis 50-1 BON]
 gi|332698873|gb|AEE95814.1| LSU ribosomal protein L35P [Mahella australiensis 50-1 BON]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +TA+GK++   A + H + K++ K  RN R    ++ AD K  I+
Sbjct: 1  MPKMKTHRGAAKRFRVTASGKIKRGKAYRSHILTKKTTKRKRNLRKIAYMSDADQKN-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 ELLP 63


>gi|271967365|ref|YP_003341561.1| 50S ribosomal protein L35P [Streptosporangium roseum DSM 43021]
 gi|270510540|gb|ACZ88818.1| 50S ribosomal protein L35P [Streptosporangium roseum DSM 43021]
          Length = 64

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+S +KKRF +T TGK++ + A + H    +S+   R  +  +VL+ AD
Sbjct: 1  MPKMKTHSGAKKRFRLTGTGKIKRRRANRAHYNEWKSSTLTRRLKSEVVLSDAD 54


>gi|333029963|ref|ZP_08458024.1| 50S ribosomal protein L35 [Bacteroides coprosuis DSM 18011]
 gi|332740560|gb|EGJ71042.1| 50S ribosomal protein L35 [Bacteroides coprosuis DSM 18011]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T TGK++ + A   H + K+S K       T ++   D K+++ 
Sbjct: 1  MPKMKTNSGAKKRFTLTGTGKIKRKHAYHSHILTKKSKKRKERLVKTGLVHPNDEKQILE 60


>gi|256422765|ref|YP_003123418.1| ribosomal protein L35 [Chitinophaga pinensis DSM 2588]
 gi|256037673|gb|ACU61217.1| ribosomal protein L35 [Chitinophaga pinensis DSM 2588]
          Length = 65

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KK F +T +G+++   A K H + K+SNK  R+ RG+ ++ SA+   V R
Sbjct: 1  MPKVKTHSRAKKTFKVTGSGQIKRYNAFKSHLLTKKSNKRKRHLRGSTLVDSANLNLVKR 60


>gi|221194630|ref|ZP_03567687.1| ribosomal protein L35 [Atopobium rimae ATCC 49626]
 gi|221185534|gb|EEE17924.1| ribosomal protein L35 [Atopobium rimae ATCC 49626]
          Length = 64

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL++AD
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLSAAD 54


>gi|320353538|ref|YP_004194877.1| 50S ribosomal protein L35P [Desulfobulbus propionicus DSM 2032]
 gi|320122040|gb|ADW17586.1| LSU ribosomal protein L35P [Desulfobulbus propionicus DSM 2032]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T  G++R   A   H + K+S K  RN R + ++A  D  K +R
Sbjct: 1  MPKMKTNRGAAKRFKATGGGRIRRAKAFASHILTKKSTKRKRNLRKSALIAEVDT-KAVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|304382819|ref|ZP_07365302.1| 50S ribosomal protein L35 [Prevotella marshii DSM 16973]
 gi|304336004|gb|EFM02251.1| 50S ribosomal protein L35 [Prevotella marshii DSM 16973]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF  T TGKV+   A   H + K++ K  RN     ++  A+ K+V
Sbjct: 1  MPKQKTNSGAKKRFHFTGTGKVKRHRAFHSHILTKKTKKQKRNLTHQTIVDQANMKQV 58


>gi|160946416|ref|ZP_02093625.1| hypothetical protein PEPMIC_00376 [Parvimonas micra ATCC 33270]
 gi|158447532|gb|EDP24527.1| hypothetical protein PEPMIC_00376 [Parvimonas micra ATCC 33270]
          Length = 63

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T TGK++   A K H   K+S K IRN R + V++S D K++
Sbjct: 1  MAKMKTHRASAKRFKRTGTGKIKRFKAYKSHLTSKKSPKRIRNLRKSTVISSGDQKRI 58


>gi|114332289|ref|YP_748511.1| 50S ribosomal protein L35 [Nitrosomonas eutropha C91]
 gi|122313050|sp|Q0ADN6|RL35_NITEC RecName: Full=50S ribosomal protein L35
 gi|114309303|gb|ABI60546.1| LSU ribosomal protein L35P [Nitrosomonas eutropha C91]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF I A G ++   A KRH + K++ K  R  RG  V+ ++D   V R
Sbjct: 1  MPKMKTKKSAAKRFRIRAGGSIKRSQAFKRHILTKKTTKNKRQLRGMTVVHASDVASV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|294787704|ref|ZP_06752948.1| ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
 gi|325266386|ref|ZP_08133064.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
 gi|294483997|gb|EFG31680.1| ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
 gi|324982179|gb|EGC17813.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVHERD 54


>gi|304387976|ref|ZP_07370148.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
 gi|304337975|gb|EFM04113.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
 gi|325127772|gb|EGC50680.1| ribosomal protein L35 [Neisseria meningitidis N1568]
 gi|325203809|gb|ADY99262.1| ribosomal protein L35 [Neisseria meningitidis M01-240355]
          Length = 97

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 90


>gi|260911581|ref|ZP_05918166.1| 50S ribosomal protein L35 [Prevotella sp. oral taxon 472 str.
          F0295]
 gi|260634287|gb|EEX52392.1| 50S ribosomal protein L35 [Prevotella sp. oral taxon 472 str.
          F0295]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF  T TGK++ + A   H + K++ K  RN   + ++  +D K+V
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRKHAYHSHILTKKTKKQKRNLVHSTLVDRSDMKQV 58


>gi|262202746|ref|YP_003273954.1| 50S ribosomal protein L35 [Gordonia bronchialis DSM 43247]
 gi|262086093|gb|ACY22061.1| ribosomal protein L35 [Gordonia bronchialis DSM 43247]
          Length = 64

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF +T +GK+  Q A +RH +  +S++  R   GT V++  DA ++ R
Sbjct: 1  MPKSKTHKGTAKRFKVTGSGKIVRQKANRRHLLEHKSSRRTRRLDGTTVVSENDAPRIKR 60


>gi|161869664|ref|YP_001598831.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
 gi|291044369|ref|ZP_06570078.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|293399555|ref|ZP_06643708.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
 gi|161595217|gb|ABX72877.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
 gi|291011263|gb|EFE03259.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|291610124|gb|EFF39246.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
 gi|316983703|gb|EFV62684.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
 gi|317163764|gb|ADV07305.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          TCDC-NG08107]
 gi|325129873|gb|EGC52677.1| ribosomal protein L35 [Neisseria meningitidis OX99.30304]
 gi|325131825|gb|EGC54525.1| ribosomal protein L35 [Neisseria meningitidis M6190]
 gi|325133764|gb|EGC56420.1| ribosomal protein L35 [Neisseria meningitidis M13399]
 gi|325136055|gb|EGC58665.1| ribosomal protein L35 [Neisseria meningitidis M0579]
 gi|325137875|gb|EGC60450.1| ribosomal protein L35 [Neisseria meningitidis ES14902]
 gi|325140123|gb|EGC62652.1| ribosomal protein L35 [Neisseria meningitidis CU385]
 gi|325144075|gb|EGC66383.1| ribosomal protein L35 [Neisseria meningitidis M01-240013]
 gi|325197941|gb|ADY93397.1| ribosomal protein L35 [Neisseria meningitidis G2136]
 gi|325200594|gb|ADY96049.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
 gi|325202482|gb|ADY97936.1| ribosomal protein L35 [Neisseria meningitidis M01-240149]
          Length = 97

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 90


>gi|302335527|ref|YP_003800734.1| LSU ribosomal protein L35P [Olsenella uli DSM 7084]
 gi|301319367|gb|ADK67854.1| LSU ribosomal protein L35P [Olsenella uli DSM 7084]
          Length = 64

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL  +DA+ V
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRAFRKETVLTPSDAQVV 58


>gi|257784328|ref|YP_003179545.1| 50S ribosomal protein L35 [Atopobium parvulum DSM 20469]
 gi|257472835|gb|ACV50954.1| ribosomal protein L35 [Atopobium parvulum DSM 20469]
          Length = 66

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 33/55 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADA 55
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL++ DA
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLSAGDA 55


>gi|268594345|ref|ZP_06128512.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|268596341|ref|ZP_06130508.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
 gi|268547734|gb|EEZ43152.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|268550129|gb|EEZ45148.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
          Length = 86

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 22 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 79


>gi|34540735|ref|NP_905214.1| 50S ribosomal protein L35 [Porphyromonas gingivalis W83]
 gi|188994828|ref|YP_001929080.1| 50S ribosomal protein L35 [Porphyromonas gingivalis ATCC 33277]
 gi|54036282|sp|Q7MVQ7|RL35_PORGI RecName: Full=50S ribosomal protein L35
 gi|226725047|sp|B2RJD8|RL35_PORG3 RecName: Full=50S ribosomal protein L35
 gi|34397049|gb|AAQ66113.1| ribosomal protein L35 [Porphyromonas gingivalis W83]
 gi|188594508|dbj|BAG33483.1| probable 50S ribosomal protein L35 [Porphyromonas gingivalis ATCC
          33277]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 32/43 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPK+KTNS +KKRF++T TGK++ + A K H + K++ K  RN
Sbjct: 1  MPKLKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRN 43


>gi|319949971|ref|ZP_08023960.1| 50S ribosomal protein L35 [Dietzia cinnamea P4]
 gi|319436367|gb|EFV91498.1| 50S ribosomal protein L35 [Dietzia cinnamea P4]
          Length = 64

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+  Q A +RH M K+  K  R   G   +A AD  ++ R
Sbjct: 1  MPKMKTHKGTAKRFRKTGTGKLVRQQANRRHIMEKKPTKRTRRLDGRTDVAPADVPRIKR 60


>gi|298369382|ref|ZP_06980700.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283385|gb|EFI24872.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 86

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 22 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 79


>gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          NCCP11945]
 gi|297250594|ref|ZP_06864618.2| conserved domain protein [Neisseria polysaccharea ATCC 43768]
 gi|193933312|gb|ACF29136.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          NCCP11945]
 gi|296838506|gb|EFH22444.1| conserved domain protein [Neisseria polysaccharea ATCC 43768]
 gi|325141984|gb|EGC64421.1| ribosomal protein L35 [Neisseria meningitidis 961-5945]
          Length = 92

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 28 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 85


>gi|224367575|ref|YP_002601738.1| RpmI [Desulfobacterium autotrophicum HRM2]
 gi|259647350|sp|C0QHL6|RL35_DESAH RecName: Full=50S ribosomal protein L35
 gi|223690291|gb|ACN13574.1| RpmI [Desulfobacterium autotrophicum HRM2]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T +GK + + A   H + K++ K  R+ R   ++ ++D K+V R
Sbjct: 1  MPKIKTNRAAAKRFKKTGSGKYKFRKANASHILTKKTTKRKRSLRLDQIIGASDLKEVKR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -LLPNG 65


>gi|253996953|ref|YP_003049017.1| 50S ribosomal protein L35 [Methylotenera mobilis JLW8]
 gi|253983632|gb|ACT48490.1| ribosomal protein L35 [Methylotenera mobilis JLW8]
          Length = 65

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF     GKV+   +  RH + K++ K  R  RGT +++S D K+V R
Sbjct: 1  MPKMKTKSSAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRKLRGTAIISSTDVKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|332878461|ref|ZP_08446182.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
 gi|332683556|gb|EGJ56432.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF +T TGKV+   A   H + K++ K  RN     ++ + + K+V
Sbjct: 1  MPKVKTNSGAKKRFRLTGTGKVKRHHAFHSHILTKKTKKQKRNLVHDDIVVTENMKQV 58


>gi|15807001|ref|NP_295728.1| 50S ribosomal protein L35 [Deinococcus radiodurans R1]
 gi|20139838|sp|Q9RSW6|RL35_DEIRA RecName: Full=50S ribosomal protein L35
 gi|51247400|pdb|1SM1|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Quinupristin And Dalfopristin
 gi|190613516|pdb|2ZJP|3 Chain 3, Thiopeptide Antibiotic Nosiheptide Bound To The Large
          Ribosomal Subunit Of Deinococcus Radiodurans
 gi|190613546|pdb|2ZJQ|3 Chain 3, Interaction Of L7 With L11 Induced By Microccocin
          Binding To The Deinococcus Radiodurans 50s Subunit
 gi|190613577|pdb|2ZJR|3 Chain 3, Refined Native Structure Of The Large Ribosomal Subunit
          (50s) From Deinococcus Radiodurans
 gi|190613684|pdb|3CF5|3 Chain 3, Thiopeptide Antibiotic Thiostrepton Bound To The Large
          Ribosomal Subunit Of Deinococcus Radiodurans
 gi|203282483|pdb|3DLL|3 Chain 3, The Oxazolidinone Antibiotics Perturb The Ribosomal
          Peptidyl-Transferase Center And Effect Trna Positioning
 gi|323714567|pdb|3PIO|3 Chain 3, Crystal Structure Of The Synergistic Antibiotic Pair
          Lankamycin And Lankacidin In Complex With The Large
          Ribosomal Subunit
 gi|323714597|pdb|3PIP|3 Chain 3, Crystal Structure Of The Synergistic Antibiotic Pair
          Lankamycin And Lankacidin In Complex With The Large
          Ribosomal Subunit
 gi|6459793|gb|AAF11554.1|AE002038_3 ribosomal protein L35 [Deinococcus radiodurans R1]
          Length = 66

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++
Sbjct: 1  MPKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LMLPRG 65


>gi|300856608|ref|YP_003781592.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
 gi|300436723|gb|ADK16490.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF IT TGK++   A K H + K+S K  RN R    L S   +K+++
Sbjct: 1  MPKMKTKRSVAKRFKITGTGKLKRSKAFKSHILTKKSAKTKRNLRKA-GLVSETQEKIMK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 KLMP 63


>gi|153004743|ref|YP_001379068.1| 50S ribosomal protein L35 [Anaeromyxobacter sp. Fw109-5]
 gi|166231151|sp|A7HBI8|RL35_ANADF RecName: Full=50S ribosomal protein L35
 gi|152028316|gb|ABS26084.1| ribosomal protein L35 [Anaeromyxobacter sp. Fw109-5]
          Length = 67

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH-GMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  LA  DAKK+
Sbjct: 1  MPKLKTKSGAKKRFIPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLAPMDAKKI 59


>gi|332969047|gb|EGK08087.1| 50S ribosomal protein L35 [Kingella kingae ATCC 23330]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNERD 54


>gi|281423152|ref|ZP_06254065.1| ribosomal protein L35 [Prevotella oris F0302]
 gi|299140594|ref|ZP_07033732.1| ribosomal protein L35 [Prevotella oris C735]
 gi|281402488|gb|EFB33319.1| ribosomal protein L35 [Prevotella oris F0302]
 gi|298577560|gb|EFI49428.1| ribosomal protein L35 [Prevotella oris C735]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRFS T TGK++   A   H + K++ K  RN     ++  ++ K+V
Sbjct: 1  MPKVKTNSGAKKRFSFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTMVDHSNMKQV 58


>gi|225024917|ref|ZP_03714109.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
          23834]
 gi|224942321|gb|EEG23530.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
          23834]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G ++   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGIKRAHAFKRHILTKKTTKNKRQLRGTAMVNERDVASV 58


>gi|255066459|ref|ZP_05318314.1| conserved domain protein [Neisseria sicca ATCC 29256]
 gi|288576252|ref|ZP_05978466.2| conserved domain protein [Neisseria mucosa ATCC 25996]
 gi|255049339|gb|EET44803.1| conserved domain protein [Neisseria sicca ATCC 29256]
 gi|288565907|gb|EFC87467.1| conserved domain protein [Neisseria mucosa ATCC 25996]
          Length = 97

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASV 90


>gi|291519541|emb|CBK74762.1| LSU ribosomal protein L35P [Butyrivibrio fibrisolvens 16/4]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT  ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K
Sbjct: 1  MPKMKTRRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRHATIVDATNVK 56


>gi|71281765|ref|YP_269608.1| 50S ribosomal protein L35 [Colwellia psychrerythraea 34H]
 gi|71147505|gb|AAZ27978.1| ribosomal protein L35 [Colwellia psychrerythraea 34H]
          Length = 101

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF  TA+G  + + AG RH + KR  K  R+ R   ++A++D K V
Sbjct: 38 MPKMKTNKGAAKRFKKTASG-YKFKQAGLRHILTKRRTKVKRHLRAKCMIAASDIKSV 94


>gi|317057704|ref|YP_004106171.1| 50S ribosomal protein L35 [Ruminococcus albus 7]
 gi|325677959|ref|ZP_08157601.1| ribosomal protein L35 [Ruminococcus albus 8]
 gi|315449973|gb|ADU23537.1| ribosomal protein L35 [Ruminococcus albus 7]
 gi|324110513|gb|EGC04687.1| ribosomal protein L35 [Ruminococcus albus 8]
          Length = 66

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 3/47 (6%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK---FIRNA 44
          MPK+KT+S +KKRF +T TGKV+ Q   KRH + ++ +K    +RNA
Sbjct: 1  MPKIKTHSGAKKRFRVTGTGKVKFQHVNKRHRLNQKDHKRKRILRNA 47


>gi|15676620|ref|NP_273764.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
 gi|59800745|ref|YP_207457.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA 1090]
 gi|121634519|ref|YP_974764.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
 gi|218767844|ref|YP_002342356.1| 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
 gi|239998486|ref|ZP_04718410.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|240013611|ref|ZP_04720524.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI18]
 gi|240016050|ref|ZP_04722590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA6140]
 gi|240080192|ref|ZP_04724735.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
 gi|240112405|ref|ZP_04726895.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|240115145|ref|ZP_04729207.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|240117429|ref|ZP_04731491.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|240120681|ref|ZP_04733643.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID24-1]
 gi|240122985|ref|ZP_04735941.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|240125237|ref|ZP_04738123.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|240127691|ref|ZP_04740352.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493205|ref|ZP_05106376.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
 gi|254804603|ref|YP_003082824.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
 gi|260441037|ref|ZP_05794853.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|268598468|ref|ZP_06132635.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|268600821|ref|ZP_06134988.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|268603126|ref|ZP_06137293.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|268681607|ref|ZP_06148469.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|268683835|ref|ZP_06150697.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|268686076|ref|ZP_06152938.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|329118118|ref|ZP_08246830.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
 gi|54039205|sp|P66274|RL35_NEIMB RecName: Full=50S ribosomal protein L35
 gi|54041902|sp|P66273|RL35_NEIMA RecName: Full=50S ribosomal protein L35
 gi|75507419|sp|Q5F9U2|RL35_NEIG1 RecName: Full=50S ribosomal protein L35
 gi|166231205|sp|A1KSY4|RL35_NEIMF RecName: Full=50S ribosomal protein L35
 gi|7225949|gb|AAF41135.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
 gi|59717640|gb|AAW89045.1| putative 50s ribosomal protein L35 [Neisseria gonorrhoeae FA
          1090]
 gi|120866225|emb|CAM09965.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
 gi|121051852|emb|CAM08158.1| putative 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
 gi|226512245|gb|EEH61590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
 gi|254668145|emb|CBA04774.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
 gi|254671882|emb|CBA04132.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha275]
 gi|261392909|emb|CAX50490.1| 50S ribosomal protein L35 [Neisseria meningitidis 8013]
 gi|268582599|gb|EEZ47275.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|268584952|gb|EEZ49628.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|268587257|gb|EEZ51933.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|268621891|gb|EEZ54291.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|268624119|gb|EEZ56519.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|268626360|gb|EEZ58760.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|308388911|gb|ADO31231.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha710]
 gi|319410091|emb|CBY90427.1| 50S ribosomal protein L35 [Neisseria meningitidis WUE 2594]
 gi|325206436|gb|ADZ01889.1| ribosomal protein L35 [Neisseria meningitidis M04-240196]
 gi|325207766|gb|ADZ03218.1| ribosomal protein L35 [Neisseria meningitidis NZ-05/33]
 gi|327465778|gb|EGF12051.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRD 54


>gi|328949635|ref|YP_004366970.1| 50S ribosomal protein L35 [Marinithermus hydrothermalis DSM
          14884]
 gi|328449959|gb|AEB10860.1| 50S ribosomal protein L35 [Marinithermus hydrothermalis DSM
          14884]
          Length = 65

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +K R  +TA GKV A   GKRH    +S K IRN      L   DA++V R
Sbjct: 1  MAKMKTHKGAKGRVKVTARGKVVAMKPGKRHLNWHKSGKSIRNKGKKFTLFEGDARRV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 ELLP 63


>gi|227875289|ref|ZP_03993431.1| ribosomal protein L35 [Mobiluncus mulieris ATCC 35243]
 gi|269978176|ref|ZP_06185126.1| ribosomal protein L35 [Mobiluncus mulieris 28-1]
 gi|306818551|ref|ZP_07452274.1| 50S ribosomal protein L35 [Mobiluncus mulieris ATCC 35239]
 gi|307701039|ref|ZP_07638064.1| ribosomal protein L35 [Mobiluncus mulieris FB024-16]
 gi|227844194|gb|EEJ54361.1| ribosomal protein L35 [Mobiluncus mulieris ATCC 35243]
 gi|269933685|gb|EEZ90269.1| ribosomal protein L35 [Mobiluncus mulieris 28-1]
 gi|304648724|gb|EFM46026.1| 50S ribosomal protein L35 [Mobiluncus mulieris ATCC 35239]
 gi|307614034|gb|EFN93278.1| ribosomal protein L35 [Mobiluncus mulieris FB024-16]
          Length = 64

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF  T +GK+  + A KRH +  +S++  R      V+A +D K+V
Sbjct: 1  MPKNKTHSGTKKRFRTTGSGKLMRETANKRHLLEHKSSRRTRRLSQDQVVAPSDVKRV 58


>gi|240146872|ref|ZP_04745473.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
 gi|257200970|gb|EEU99254.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
 gi|291536061|emb|CBL09173.1| LSU ribosomal protein L35P [Roseburia intestinalis M50/1]
 gi|291538554|emb|CBL11665.1| LSU ribosomal protein L35P [Roseburia intestinalis XB6B4]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRKPAIVDATNVK 56


>gi|111224588|ref|YP_715382.1| 50S ribosomal protein L35 [Frankia alni ACN14a]
 gi|123142776|sp|Q0RF99|RL35_FRAAA RecName: Full=50S ribosomal protein L35
 gi|111152120|emb|CAJ63848.1| 50S ribosomal subunit protein A [Frankia alni ACN14a]
          Length = 64

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF IT +GKV  Q A +RH +  +S++  R   G   L  ADA ++ R
Sbjct: 1  MPKQKSHSGASKRFRITGSGKVVRQKANRRHLLEHKSSRRTRRLAGVEPLTKADAGRIKR 60


>gi|163756233|ref|ZP_02163348.1| 50S ribosomal protein L35 [Kordia algicida OT-1]
 gi|161323845|gb|EDP95179.1| 50S ribosomal protein L35 [Kordia algicida OT-1]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAYKSHILTKKSKK 39


>gi|283797708|ref|ZP_06346861.1| ribosomal protein L35 [Clostridium sp. M62/1]
 gi|291074604|gb|EFE11968.1| ribosomal protein L35 [Clostridium sp. M62/1]
 gi|295092066|emb|CBK78173.1| LSU ribosomal protein L35P [Clostridium cf. saccharolyticum K10]
 gi|295115132|emb|CBL35979.1| LSU ribosomal protein L35P [butyrate-producing bacterium SM4/1]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TGK+    A K H + K+S K  RN R  +V  + +A KV++
Sbjct: 1  MPKMKTSRAAAKRFKTTGTGKLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNA-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|291279883|ref|YP_003496718.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
 gi|290754585|dbj|BAI80962.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+  + KRF +T +GKV+ + AG RH +  ++ K  R  R   +L  ADA+ V
Sbjct: 1  MPKVKTHRGAAKRFKVTGSGKVKYKKAGLRHLLSSKAKKRKRALRHPGILEGADAQNV 58


>gi|120434967|ref|YP_860653.1| 50S ribosomal protein L35 [Gramella forsetii KT0803]
 gi|166231189|sp|A0LYZ1|RL35_GRAFK RecName: Full=50S ribosomal protein L35
 gi|117577117|emb|CAL65586.1| 50S rbosomal protein L35 [Gramella forsetii KT0803]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|289523102|ref|ZP_06439956.1| ribosomal protein L35 [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289503645|gb|EFD24809.1| ribosomal protein L35 [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 68

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ITATGKV  +   + H + K++ K IR  +    L  A A+K I+
Sbjct: 3  MPKIKTHSGAKKRFKITATGKVAYKKVNRGHLLRKKNQKRIRALKQKGYLDEAFARK-IK 61

Query: 61 NYLP 64
            +P
Sbjct: 62 QLMP 65


>gi|84393195|ref|ZP_00991958.1| 50S ribosomal protein L35 [Vibrio splendidus 12B01]
 gi|84376161|gb|EAP93046.1| 50S ribosomal protein L35 [Vibrio splendidus 12B01]
          Length = 64

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + AGKRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFQKTAGG-IKFKHAGKRHILTKRTTKNKRQLRPNSILPKCEVAAVLR 59


>gi|251795321|ref|YP_003010052.1| ribosomal protein L35 [Paenibacillus sp. JDR-2]
 gi|247542947|gb|ACS99965.1| ribosomal protein L35 [Paenibacillus sp. JDR-2]
          Length = 66

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A+ D +++
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNHLLSHKSGRQKRVLAGQPLMAAGDVRRI 58


>gi|332521038|ref|ZP_08397496.1| ribosomal protein L35 [Lacinutrix algicola 5H-3-7-4]
 gi|332043131|gb|EGI79328.1| ribosomal protein L35 [Lacinutrix algicola 5H-3-7-4]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|295395437|ref|ZP_06805636.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971759|gb|EFG47635.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 68

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+S +KKR  +T +GK+  +  G RH    +S+K  R      VLA  DA K
Sbjct: 1  MPKMKTHSGTKKRVRVTGSGKIMREGVGNRHLAEHKSSKRKRQISQDQVLAPGDAAK 57


>gi|332292752|ref|YP_004431361.1| ribosomal protein L35 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170838|gb|AEE20093.1| ribosomal protein L35 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|258647090|ref|ZP_05734559.1| ribosomal protein L35 [Prevotella tannerae ATCC 51259]
 gi|260853037|gb|EEX72906.1| ribosomal protein L35 [Prevotella tannerae ATCC 51259]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNSS+KKRF +T +GKV  + A   H + K++ K  RN   T +   ++ K+V
Sbjct: 1  MPKVKTNSSAKKRFVLTGSGKVVRRHAYHSHILTKKTKKQKRNLVHTAIAHKSNVKQV 58


>gi|116515021|ref|YP_802650.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Cc (Cinara
          cedri)]
 gi|122285583|sp|Q057Z2|RL35_BUCCC RecName: Full=50S ribosomal protein L35
 gi|116256875|gb|ABJ90557.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Cc (Cinara
          cedri)]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+G  + + A  RH + K++  + R  R  ++L+ +D KKV+ 
Sbjct: 1  MPKIKTLRSASKRFKKTASGLFKRKKANLRHILTKKNTNYKRCLRKKIILSLSDYKKVLL 60

Query: 61 NYLP 64
           +LP
Sbjct: 61 -FLP 63


>gi|86131540|ref|ZP_01050138.1| 50S ribosomal protein L35 [Dokdonia donghaensis MED134]
 gi|85817985|gb|EAQ39153.1| 50S ribosomal protein L35 [Dokdonia donghaensis MED134]
          Length = 65

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|118617267|ref|YP_905599.1| 50S ribosomal protein L35 [Mycobacterium ulcerans Agy99]
 gi|183982463|ref|YP_001850754.1| 50S ribosomal protein L35, RpmL [Mycobacterium marinum M]
 gi|166231203|sp|A0PP59|RL35_MYCUA RecName: Full=50S ribosomal protein L35
 gi|226725038|sp|B2HR13|RL35_MYCMM RecName: Full=50S ribosomal protein L35
 gi|118569377|gb|ABL04128.1| 50S ribosomal protein L35, RpmL [Mycobacterium ulcerans Agy99]
 gi|183175789|gb|ACC40899.1| 50S ribosomal protein L35, RpmL [Mycobacterium marinum M]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH +  +S+K  R   G   +A+ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSKRTRRLDGRTTVAANDTKRV 58


>gi|115375479|ref|ZP_01462739.1| ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|310821382|ref|YP_003953740.1| 50S ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|115367522|gb|EAU66497.1| ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|309394454|gb|ADO71913.1| 50S ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
          Length = 69

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVR-AQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT SS+KKR  +  +GKV+  +A GK      ++    R  RGT  L   DAKKVI
Sbjct: 1  MPKLKTRSSAKKRLQVKKSGKVKHGKAYGKHLFTHAKTPAQKRRNRGTGHLRDMDAKKVI 60

Query: 60 RNYLPNG 66
          +   P G
Sbjct: 61 KEMFPYG 67


>gi|238927110|ref|ZP_04658870.1| ribosomal protein L35 [Selenomonas flueggei ATCC 43531]
 gi|238885090|gb|EEQ48728.1| ribosomal protein L35 [Selenomonas flueggei ATCC 43531]
          Length = 67

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T  G+ R   A KRH + K++ K  RN R   +  S+D K+ IR
Sbjct: 3  MPKIKTRRAAAKRFTVTGGGEFRRNKAYKRHILEKKTPKRKRNLRKAALADSSDYKR-IR 61

Query: 61 NYLP 64
            LP
Sbjct: 62 KMLP 65


>gi|329121026|ref|ZP_08249657.1| ribosomal protein L35 [Dialister micraerophilus DSM 19965]
 gi|327471188|gb|EGF16642.1| ribosomal protein L35 [Dialister micraerophilus DSM 19965]
          Length = 66

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +T +G+++   A + H + K+S K  RN R   +++ AD K++
Sbjct: 1  MPKMKTCRSAAKRFKVTGSGQIKRNKAFRSHILEKKSPKRKRNYRKAALISKADYKRI 58


>gi|302878340|ref|YP_003846904.1| 50S ribosomal protein L35 [Gallionella capsiferriformans ES-2]
 gi|302581129|gb|ADL55140.1| ribosomal protein L35 [Gallionella capsiferriformans ES-2]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF + A G ++   A KRH +  ++ K  R  RGT  + S +    +R
Sbjct: 1  MPKMKTKSGAKKRFVVRAGGSIKRACAFKRHILTSKTTKTKRQLRGTAEVHSTNT-AAVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|222099842|ref|YP_002534410.1| 50S ribosomal protein L35 [Thermotoga neapolitana DSM 4359]
 gi|254799884|sp|B9K7W1|RL35_THENN RecName: Full=50S ribosomal protein L35
 gi|221572232|gb|ACM23044.1| 50S ribosomal protein L35 [Thermotoga neapolitana DSM 4359]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF +T  GK+    A K H   K+    +R  R   V++SAD  +V+R
Sbjct: 1  MPKMKTNRSAAKRFRVTRKGKIIRNHAYKSHKTRKKRRNVLRALRKKDVVSSADKNRVLR 60


>gi|71892132|ref|YP_277864.1| 50S ribosomal protein L35 [Candidatus Blochmannia pennsylvanicus
          str. BPEN]
 gi|148887063|sp|Q492V3|RL35_BLOPB RecName: Full=50S ribosomal protein L35
 gi|71796238|gb|AAZ40989.1| 50S ribosomal subunit protein L35 [Candidatus Blochmannia
          pennsylvanicus str. BPEN]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF ITA GK + + A  RH + K+S K  R+ R   +L       +++
Sbjct: 1  MPKIKTLQAASKRFKITALGKYKYKHANMRHILTKKSTKHKRHLRQKSILPKIYLTTIMK 60

Query: 61 NYLP 64
           YLP
Sbjct: 61 -YLP 63


>gi|284037108|ref|YP_003387038.1| ribosomal protein L35 [Spirosoma linguale DSM 74]
 gi|283816401|gb|ADB38239.1| ribosomal protein L35 [Spirosoma linguale DSM 74]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS++KKRF +T TGK++ + A   H + K++ K  RN     ++   D +++
Sbjct: 1  MPKVKTNSAAKKRFKLTGTGKIKRKHAFHSHILTKKTTKQKRNLVHAALVDGPDERRI 58


>gi|304436953|ref|ZP_07396916.1| 50S ribosomal protein L35 [Selenomonas sp. oral taxon 149 str.
          67H29BP]
 gi|304369904|gb|EFM23566.1| 50S ribosomal protein L35 [Selenomonas sp. oral taxon 149 str.
          67H29BP]
          Length = 67

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T +G+ R   A KRH + K++ K  RN R   +  ++D K+ IR
Sbjct: 3  MPKIKTRRAAAKRFTVTGSGEFRRNKAYKRHILEKKTPKRKRNLRKAALADNSDYKR-IR 61

Query: 61 NYLP 64
            LP
Sbjct: 62 KMLP 65


>gi|296164541|ref|ZP_06847112.1| 50S ribosomal protein L35 [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295900141|gb|EFG79576.1| 50S ribosomal protein L35 [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  +S+   R   G   +++ D K+V  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSTRTRRLEGRTTVSANDTKRV-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NALLNG 64


>gi|261408923|ref|YP_003245164.1| 50S ribosomal protein L35 [Paenibacillus sp. Y412MC10]
 gi|329922256|ref|ZP_08277958.1| ribosomal protein L35 [Paenibacillus sp. HGF5]
 gi|261285386|gb|ACX67357.1| ribosomal protein L35 [Paenibacillus sp. Y412MC10]
 gi|328942293|gb|EGG38563.1| ribosomal protein L35 [Paenibacillus sp. HGF5]
          Length = 66

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV+   A K H +  +S +  R    + V+A  D K++
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVKRYKAYKNHLLSHKSKRAKRVLSNSPVMAPGDVKRL 58


>gi|120404301|ref|YP_954130.1| 50S ribosomal protein L35 [Mycobacterium vanbaalenii PYR-1]
 gi|166231204|sp|A1TAC4|RL35_MYCVP RecName: Full=50S ribosomal protein L35
 gi|119957119|gb|ABM14124.1| LSU ribosomal protein L35P [Mycobacterium vanbaalenii PYR-1]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T +GKV  Q A +RH +  +  K  R   G  V+A+ D K+V
Sbjct: 1  MPKAKTHSGASKRFRTTGSGKVVRQKANRRHLLEHKPTKRTRRLDGRTVVAANDVKRV 58


>gi|294793959|ref|ZP_06759096.1| ribosomal protein L35 [Veillonella sp. 3_1_44]
 gi|294455529|gb|EFG23901.1| ribosomal protein L35 [Veillonella sp. 3_1_44]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A AD K+V++
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKADHKRVVK 60

Query: 61 NYLP 64
            LP
Sbjct: 61 C-LP 63


>gi|148381085|ref|YP_001255626.1| ribosomal protein L35 [Clostridium botulinum A str. ATCC 3502]
 gi|153932520|ref|YP_001385458.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          19397]
 gi|153937318|ref|YP_001388865.1| 50S ribosomal protein L35 [Clostridium botulinum A str. Hall]
 gi|153940615|ref|YP_001392413.1| 50S ribosomal protein L35 [Clostridium botulinum F str.
          Langeland]
 gi|168179215|ref|ZP_02613879.1| ribosomal protein L35 [Clostridium botulinum NCTC 2916]
 gi|170756486|ref|YP_001782770.1| 50S ribosomal protein L35 [Clostridium botulinum B1 str. Okra]
 gi|170759528|ref|YP_001788455.1| 50S ribosomal protein L35 [Clostridium botulinum A3 str. Loch
          Maree]
 gi|187776942|ref|ZP_02993415.1| hypothetical protein CLOSPO_00486 [Clostridium sporogenes ATCC
          15579]
 gi|226950566|ref|YP_002805657.1| ribosomal protein L35 [Clostridium botulinum A2 str. Kyoto]
 gi|237796592|ref|YP_002864144.1| 50S ribosomal protein L35 [Clostridium botulinum Ba4 str. 657]
 gi|166231176|sp|A7FY85|RL35_CLOB1 RecName: Full=50S ribosomal protein L35
 gi|166231177|sp|A5I6L6|RL35_CLOBH RecName: Full=50S ribosomal protein L35
 gi|166231178|sp|A7GI03|RL35_CLOBL RecName: Full=50S ribosomal protein L35
 gi|226724985|sp|B1IMV1|RL35_CLOBK RecName: Full=50S ribosomal protein L35
 gi|226724986|sp|B1L0T5|RL35_CLOBM RecName: Full=50S ribosomal protein L35
 gi|254802442|sp|C1FKM8|RL35_CLOBJ RecName: Full=50S ribosomal protein L35
 gi|259647346|sp|C3KTJ8|RL35_CLOB6 RecName: Full=50S ribosomal protein L35
 gi|148290569|emb|CAL84698.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          3502]
 gi|152928564|gb|ABS34064.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          19397]
 gi|152933232|gb|ABS38731.1| 50S ribosomal protein L35 [Clostridium botulinum A str. Hall]
 gi|152936511|gb|ABS42009.1| 50S ribosomal protein L35 [Clostridium botulinum F str.
          Langeland]
 gi|169121698|gb|ACA45534.1| 50S ribosomal protein L35 [Clostridium botulinum B1 str. Okra]
 gi|169406517|gb|ACA54928.1| 50S ribosomal protein L35 [Clostridium botulinum A3 str. Loch
          Maree]
 gi|182670133|gb|EDT82109.1| ribosomal protein L35 [Clostridium botulinum NCTC 2916]
 gi|187775601|gb|EDU39403.1| hypothetical protein CLOSPO_00486 [Clostridium sporogenes ATCC
          15579]
 gi|226844483|gb|ACO87149.1| ribosomal protein L35 [Clostridium botulinum A2 str. Kyoto]
 gi|229261963|gb|ACQ52996.1| 50S ribosomal protein L35 [Clostridium botulinum Ba4 str. 657]
 gi|295320403|gb|ADG00781.1| 50S ribosomal protein L35 [Clostridium botulinum F str. 230613]
 gi|322807446|emb|CBZ05020.1| LSU ribosomal protein L35p [Clostridium botulinum H04402 065]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK++   A K H + K+S K  RN R    + S   +KV++
Sbjct: 1  MPKMKTKRAAAKRFKVTGTGKLKRAKAFKSHILTKKSRKTKRNLRKAGYV-SESQEKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KVLP 63


>gi|118573004|sp|Q480B1|RL35_COLP3 RecName: Full=50S ribosomal protein L35
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF  TA+G  + + AG RH + KR  K  R+ R   ++A++D K V
Sbjct: 1  MPKMKTNKGAAKRFKKTASG-YKFKQAGLRHILTKRRTKVKRHLRAKCMIAASDIKSV 57


>gi|319760486|ref|YP_004124424.1| 50S ribosomal protein L35 [Candidatus Blochmannia vafer str.
          BVAF]
 gi|318039200|gb|ADV33750.1| 50S ribosomal protein L35 [Candidatus Blochmannia vafer str.
          BVAF]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  S+KKRF+ T++GK + + A  RH + K+S+K  R+ R   VL++    K+
Sbjct: 1  MPKIKTLKSAKKRFTKTSSGKYKYKHAYTRHILTKKSSKLKRHLRHRSVLSNMYISKI 58


>gi|145224125|ref|YP_001134803.1| 50S ribosomal protein L35 [Mycobacterium gilvum PYR-GCK]
 gi|315444461|ref|YP_004077340.1| 50S ribosomal protein L35P [Mycobacterium sp. Spyr1]
 gi|189042776|sp|A4T9V0|RL35_MYCGI RecName: Full=50S ribosomal protein L35
 gi|145216611|gb|ABP46015.1| LSU ribosomal protein L35P [Mycobacterium gilvum PYR-GCK]
 gi|315262764|gb|ADT99505.1| LSU ribosomal protein L35P [Mycobacterium sp. Spyr1]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  ++ K  R   G  V+A  D K+V +
Sbjct: 1  MPKAKTHSGASKRFRKTGTGKIVRQKANRRHLLEHKATKRTRRLDGRTVVAPNDVKRVTK 60


>gi|302342265|ref|YP_003806794.1| ribosomal protein L35 [Desulfarculus baarsii DSM 2075]
 gi|301638878|gb|ADK84200.1| ribosomal protein L35 [Desulfarculus baarsii DSM 2075]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF +T +G+++   A K H + K++ K +RN R + ++  ++   V R
Sbjct: 1  MPKIKTNRAAAKRFRVTGSGRIKRSKANKSHILTKKNTKRLRNLRKSDLVDRSNMAGV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 RLLPN 64


>gi|261415202|ref|YP_003248885.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
 gi|261371658|gb|ACX74403.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
 gi|302327303|gb|ADL26504.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +G V+ + AG RH   K + K  RN R   ++   D   V R
Sbjct: 1  MPKMKTHSGAKKRFRVTGSGHVKFKRAGMRHIQAKMNTKRKRNLRKGALVKKVDTYHVKR 60


>gi|170781628|ref|YP_001709960.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          sepedonicus]
 gi|189042760|sp|B0RHC1|RL35_CLAMS RecName: Full=50S ribosomal protein L35
 gi|169156196|emb|CAQ01338.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          sepedonicus]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+S +KKRF +T +GK+  Q AG RH +  +S+K          LA AD K
Sbjct: 1  MPKQKTHSGAKKRFKVTGSGKIMKQQAGMRHNLEVKSSKRKARLNQDQPLAKADMK 56


>gi|239993781|ref|ZP_04714305.1| ribosomal protein L35 [Alteromonas macleodii ATCC 27126]
 gi|332141018|ref|YP_004426756.1| 50S ribosomal protein L35 [Alteromonas macleodii str. 'Deep
          ecotype']
 gi|226713813|sp|B4RSL6|RL35_ALTMD RecName: Full=50S ribosomal protein L35
 gi|327551040|gb|AEA97758.1| 50S ribosomal protein L35 [Alteromonas macleodii str. 'Deep
          ecotype']
 gi|332993605|gb|AEF03660.1| 50S ribosomal protein L35 [Alteromonas sp. SN2]
          Length = 65

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  T +G+ +++ +  RH + K+S+K  R+ RG  ++  +D  K+++
Sbjct: 1  MPKMKTVSGAAKRFKKTGSGRFKSKQSHLRHILTKKSSKRKRHLRGKKLVHDSDT-KLVQ 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|311747149|ref|ZP_07720934.1| ribosomal protein L35 [Algoriphagus sp. PR1]
 gi|126578858|gb|EAZ83022.1| ribosomal protein L35 [Algoriphagus sp. PR1]
          Length = 64

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT SS+KKRF++T TGK++ + A K H + K++ K   N   T ++  +D  +V
Sbjct: 1  MPKVKTKSSAKKRFALTGTGKIKRKHAFKSHILTKKATKRKNNLTKTGLVHESDEGRV 58


>gi|86158397|ref|YP_465182.1| 50S ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|148887060|sp|Q2IJB9|RL35_ANADE RecName: Full=50S ribosomal protein L35
 gi|85774908|gb|ABC81745.1| LSU ribosomal protein L35P [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 67

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH-GMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  LA  D KK+
Sbjct: 1  MPKLKTKSGAKKRFVPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLAPMDEKKI 59


>gi|109898812|ref|YP_662067.1| ribosomal protein L35 [Pseudoalteromonas atlantica T6c]
 gi|332306908|ref|YP_004434759.1| ribosomal protein L35 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|122971860|sp|Q15SX5|RL35_PSEA6 RecName: Full=50S ribosomal protein L35
 gi|109701093|gb|ABG41013.1| LSU ribosomal protein L35P [Pseudoalteromonas atlantica T6c]
 gi|332174237|gb|AEE23491.1| ribosomal protein L35 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G+ +++ +  RH + K+S+K  R+ RG  +   AD   +I+
Sbjct: 1  MPKMKTNRGAAKRFRKTASGRFKSKQSHLRHILTKKSSKRKRHLRGKKLAHVADT-ALIQ 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|311742379|ref|ZP_07716188.1| 50S ribosomal protein L35 [Aeromicrobium marinum DSM 15272]
 gi|311314007|gb|EFQ83915.1| 50S ribosomal protein L35 [Aeromicrobium marinum DSM 15272]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K +S  KKR  +T +GK+R +   +RH +  +S+   R   GT  ++ AD KKV
Sbjct: 1  MPKFKPHSGMKKRVKLTGSGKLRREQTNRRHLLEHKSSSRTRRLEGTTDVSKADTKKV 58


>gi|288918243|ref|ZP_06412598.1| ribosomal protein L35 [Frankia sp. EUN1f]
 gi|288350413|gb|EFC84635.1| ribosomal protein L35 [Frankia sp. EUN1f]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ + KRF +T TGKV  + A + H    +S++  R     +VL++AD +++ R
Sbjct: 1  MPKMKTHTGAGKRFRVTGTGKVMRRRANRSHLFEHKSSRRTRRLYDEVVLSAADDRRIKR 60


>gi|46196114|gb|AAS80532.1| LSU ribosomal protein L35P [Thermus thermophilus HB27]
          Length = 62

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A++ I+  L
Sbjct: 1  MKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAER-IKLLL 59

Query: 64 P 64
          P
Sbjct: 60 P 60


>gi|54036304|sp|Q83GT1|RL35_TROWT RecName: Full=50S ribosomal protein L35
 gi|54036305|sp|Q83HH1|RL35_TROW8 RecName: Full=50S ribosomal protein L35
 gi|28410887|emb|CAD67272.1| 50s ribosomal protein L35 [Tropheryma whipplei TW08/27]
 gi|28476172|gb|AAO44262.1| 50S ribosomal protein L35 [Tropheryma whipplei str. Twist]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          +PK KT+S +KKRF +T +G V    AG RH    RS++  R   G   ++ AD+K
Sbjct: 2  VPKQKTHSGAKKRFKLTGSGSVSRARAGMRHNFEHRSSRVTRRLTGRQFVSDADSK 57


>gi|85858499|ref|YP_460701.1| 50S ribosomal protein L35P [Syntrophus aciditrophicus SB]
 gi|148887118|sp|Q2LR20|RL35_SYNAS RecName: Full=50S ribosomal protein L35
 gi|85721590|gb|ABC76533.1| LSU ribosomal protein L35P [Syntrophus aciditrophicus SB]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GKVR   A   H M  ++ K  RN R + +L   D K + R
Sbjct: 1  MPKLKTHRGAAKRFKLTGSGKVRRHHANASHIMTTKTTKRKRNLRKSTILDKRDEKGIKR 60


>gi|78486006|ref|YP_391931.1| 50S ribosomal protein L35 [Thiomicrospira crunogena XCL-2]
 gi|148887124|sp|Q31F16|RL35_THICR RecName: Full=50S ribosomal protein L35
 gi|78364292|gb|ABB42257.1| LSU ribosomal protein L35P [Thiomicrospira crunogena XCL-2]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S++KRF  T +G+ + + +  RH + K+S K  R+ R   ++   D   ++R
Sbjct: 1  MPKMKTNKSAQKRFKKTGSGRFKCKQSHLRHILTKKSTKRKRHLRAASMIHDNDV-AMVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|306820005|ref|ZP_07453655.1| 50S ribosomal protein L35 [Eubacterium yurii subsp. margaretiae
          ATCC 43715]
 gi|304551953|gb|EFM39894.1| 50S ribosomal protein L35 [Eubacterium yurii subsp. margaretiae
          ATCC 43715]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T TGK++   A K H + K+S K  RN R   +++  D  ++  
Sbjct: 1  MPKMKTHRGAAKRFKVTGTGKLKRFKAFKSHILTKKSQKRKRNFRKATIVSHGDTMRIT- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QLLP 63


>gi|296119683|ref|ZP_06838241.1| ribosomal protein L35 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967566|gb|EFG80833.1| ribosomal protein L35 [Corynebacterium ammoniagenes DSM 20306]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + AG+RH +  +++K  R  +GT  +A AD K++ R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGRRHLLEGKTSKRTRRLKGTEAVAPADVKRIKR 59


>gi|27904624|ref|NP_777750.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Bp (Baizongia
          pistaciae)]
 gi|31076930|sp|Q89AV9|RL35_BUCBP RecName: Full=50S ribosomal protein L35
 gi|27904021|gb|AAO26855.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Bp (Baizongia
          pistaciae)]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  T +GK + + A  RH + K++  + R+ R  ++++  D +KV R
Sbjct: 1  MPKIKTLRSAAKRFKKTESGKFKRKQAHLRHILTKKNTHYKRHLRSKVMISKKDIQKV-R 59

Query: 61 NYLP 64
           +LP
Sbjct: 60 LFLP 63


>gi|269956117|ref|YP_003325906.1| 50S ribosomal protein L35 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304798|gb|ACZ30348.1| ribosomal protein L35 [Xylanimonas cellulosilytica DSM 15894]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF IT +GKV  + A  RH +  + +   R      V+A AD KK+
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANARHLLEHKPSTRTRRLAQDQVVAPADVKKI 58


>gi|217967695|ref|YP_002353201.1| ribosomal protein L35 [Dictyoglomus turgidum DSM 6724]
 gi|226724999|sp|B8E0E2|RL35_DICTD RecName: Full=50S ribosomal protein L35
 gi|217336794|gb|ACK42587.1| ribosomal protein L35 [Dictyoglomus turgidum DSM 6724]
          Length = 66

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+ KRF +TATGK+  + AGKRH + K+S    R       + S D  KV R
Sbjct: 1  MSKLKTRSSAAKRFKVTATGKILHKKAGKRHNLSKKSESRKRRLDIPGEIKSVDRWKVER 60

Query: 61 NYLPNGI 67
            LP  +
Sbjct: 61 -MLPYNL 66


>gi|313896283|ref|ZP_07829836.1| ribosomal protein L35 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529198|ref|ZP_08030290.1| ribosomal protein L35 [Selenomonas artemidis F0399]
 gi|312975082|gb|EFR40544.1| ribosomal protein L35 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138828|gb|EFW30718.1| ribosomal protein L35 [Selenomonas artemidis F0399]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF+ T +G+ R   A KRH + K+S K  RN R   +  ++D K+ IR
Sbjct: 1  MPKIKTRRAAAKRFTATGSGEFRRNKAYKRHILEKKSPKRKRNLRKAALADTSDYKR-IR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KMLP 63


>gi|260887111|ref|ZP_05898374.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|330839116|ref|YP_004413696.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|260863173|gb|EEX77673.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|329746880|gb|AEC00237.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRFSIT +G+ +   A K H + K++ K  RN R   ++A+AD ++V
Sbjct: 1  MPKVKTRRAAAKRFSITGSGEFKRNKAFKSHILEKKTRKRKRNLRKATLVAAADHRRV 58


>gi|28948947|pdb|1NKW|3 Chain 3, Crystal Structure Of The Large Ribosomal Subunit From
          Deinococcus Radiodurans
 gi|66361049|pdb|1YL3|8 Chain 8, Crystal Structure Of 70s Ribosome With Thrs Operator And
          Trnas. Large Subunit. The Coordinates For The Small
          Subunit Are In The Pdb Entry 1yl4.
 gi|88192286|pdb|2B66|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of
          Release Factor Rf1, Trnas And Mrna Bound To The
          Ribosome. This File Contains The 50s Subunit From A
          Crystal Structure Of Release Factor Rf1, Trnas And Mrna
          Bound To The Ribosome And Is Described In Remark 400
 gi|88192349|pdb|2B9N|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of
          Release Factor Rf2, Trnas And Mrna Bound To The
          Ribosome. This File Contains The 50s Subunit From A
          Crystal Structure Of Release Factor Rf1, Trnas And Mrna
          Bound To The Ribosome And Is Described In Remark 400.
 gi|88192404|pdb|2B9P|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of The
          Ribosome In Complex With Trnas And Mrna With A Stop
          Codon In The A-Site. This File Contains The 50s Subunit
          From A Crystal Structure Of The Ribosome In Complex
          With Trnas And Mrna With A Stop Codon In The A-Site And
          Is Described In Remark 400
          Length = 64

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+
Sbjct: 1  MPKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAE 54


>gi|284033333|ref|YP_003383264.1| 50S ribosomal protein L35 [Kribbella flavida DSM 17836]
 gi|283812626|gb|ADB34465.1| ribosomal protein L35 [Kribbella flavida DSM 17836]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+S  KKR  IT +GK+R +  G RH    +S+K  R   GT+ +A +  KK
Sbjct: 1  MPKMKTHSGMKKRVRITGSGKIRREQTGIRHLAEAKSSKRKRRLSGTVEVAPSYVKK 57


>gi|221066196|ref|ZP_03542301.1| ribosomal protein L35 [Comamonas testosteroni KF-1]
 gi|264679164|ref|YP_003279071.1| ribosomal protein L35 [Comamonas testosteroni CNB-2]
 gi|299533558|ref|ZP_07046934.1| 50S ribosomal protein L35 [Comamonas testosteroni S44]
 gi|220711219|gb|EED66587.1| ribosomal protein L35 [Comamonas testosteroni KF-1]
 gi|262209677|gb|ACY33775.1| ribosomal protein L35 [Comamonas testosteroni CNB-2]
 gi|298718464|gb|EFI59445.1| 50S ribosomal protein L35 [Comamonas testosteroni S44]
          Length = 67

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + + S D
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGIVNVHSGD 54


>gi|325856651|ref|ZP_08172289.1| ribosomal protein L35 [Prevotella denticola CRIS 18C-A]
 gi|327313432|ref|YP_004328869.1| 50S ribosomal protein L35 [Prevotella denticola F0289]
 gi|325483365|gb|EGC86340.1| ribosomal protein L35 [Prevotella denticola CRIS 18C-A]
 gi|326944673|gb|AEA20558.1| ribosomal protein L35 [Prevotella denticola F0289]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++  ++ K+V
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGSNLKQV 58


>gi|134299471|ref|YP_001112967.1| 50S ribosomal protein L35 [Desulfotomaculum reducens MI-1]
 gi|172044280|sp|A4J4Y9|RL35_DESRM RecName: Full=50S ribosomal protein L35
 gi|134052171|gb|ABO50142.1| LSU ribosomal protein L35P [Desulfotomaculum reducens MI-1]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TATGK+R   A   H + K++ K  RN R + ++  +DA ++ R
Sbjct: 1  MPKIKTHRGAAKRFKKTATGKIRGWHAFHSHILGKKTAKRKRNLRKSTIIHESDAVRISR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -LLP 63


>gi|15594534|ref|NP_212323.1| 50S ribosomal protein L35 [Borrelia burgdorferi B31]
 gi|195941920|ref|ZP_03087302.1| 50S ribosomal protein L35 [Borrelia burgdorferi 80a]
 gi|216264178|ref|ZP_03436170.1| ribosomal protein L35 [Borrelia burgdorferi 156a]
 gi|218249393|ref|YP_002374717.1| ribosomal protein L35 [Borrelia burgdorferi ZS7]
 gi|221217525|ref|ZP_03588995.1| ribosomal protein L35 [Borrelia burgdorferi 72a]
 gi|223889274|ref|ZP_03623862.1| ribosomal protein L35 [Borrelia burgdorferi 64b]
 gi|224532833|ref|ZP_03673448.1| ribosomal protein L35 [Borrelia burgdorferi WI91-23]
 gi|224534069|ref|ZP_03674652.1| ribosomal protein L35 [Borrelia burgdorferi CA-11.2a]
 gi|225548517|ref|ZP_03769565.1| ribosomal protein L35 [Borrelia burgdorferi 94a]
 gi|225549787|ref|ZP_03770751.1| ribosomal protein L35 [Borrelia burgdorferi 118a]
 gi|226321507|ref|ZP_03797033.1| ribosomal protein L35 [Borrelia burgdorferi Bol26]
 gi|6094061|sp|O51207|RL35_BORBU RecName: Full=50S ribosomal protein L35
 gi|226713824|sp|B7J1C2|RL35_BORBZ RecName: Full=50S ribosomal protein L35
 gi|2688075|gb|AAC66572.1| ribosomal protein L35 (rpmI) [Borrelia burgdorferi B31]
 gi|215980651|gb|EEC21458.1| ribosomal protein L35 [Borrelia burgdorferi 156a]
 gi|218164581|gb|ACK74642.1| ribosomal protein L35 [Borrelia burgdorferi ZS7]
 gi|221192588|gb|EEE18805.1| ribosomal protein L35 [Borrelia burgdorferi 72a]
 gi|223885307|gb|EEF56409.1| ribosomal protein L35 [Borrelia burgdorferi 64b]
 gi|224512222|gb|EEF82608.1| ribosomal protein L35 [Borrelia burgdorferi WI91-23]
 gi|224512768|gb|EEF83136.1| ribosomal protein L35 [Borrelia burgdorferi CA-11.2a]
 gi|225369595|gb|EEG99044.1| ribosomal protein L35 [Borrelia burgdorferi 118a]
 gi|225370780|gb|EEH00215.1| ribosomal protein L35 [Borrelia burgdorferi 94a]
 gi|226232696|gb|EEH31449.1| ribosomal protein L35 [Borrelia burgdorferi Bol26]
 gi|312148490|gb|ADQ31149.1| ribosomal protein L35 [Borrelia burgdorferi JD1]
          Length = 66

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|218296412|ref|ZP_03497155.1| ribosomal protein L35 [Thermus aquaticus Y51MC23]
 gi|218243206|gb|EED09737.1| ribosomal protein L35 [Thermus aquaticus Y51MC23]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +KKR  +TA+GKV A   GKRH    +S K IR       LA  +A++ I+
Sbjct: 1  MGKMKTHKGAKKRVKVTASGKVVAMKTGKRHLNWHKSGKTIRQKGRKFTLAKPEAER-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|118443181|ref|YP_877835.1| 50S ribosomal protein L35 [Clostridium novyi NT]
 gi|166231179|sp|A0PZN3|RL35_CLONN RecName: Full=50S ribosomal protein L35
 gi|118133637|gb|ABK60681.1| ribosomal protein L35 [Clostridium novyi NT]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  +KV++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQ-EKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|269126374|ref|YP_003299744.1| 50S ribosomal protein L35 [Thermomonospora curvata DSM 43183]
 gi|268311332|gb|ACY97706.1| ribosomal protein L35 [Thermomonospora curvata DSM 43183]
          Length = 71

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GKV  + A + H +  + +K  R   G +V+A AD K +
Sbjct: 8  MPKTKTHSGAKKRFKLTGSGKVTRRRANRNHLLEHKPSKRTRRLAGRVVVADADTKMI 65


>gi|77164651|ref|YP_343176.1| 50S ribosomal protein L35 [Nitrosococcus oceani ATCC 19707]
 gi|254433249|ref|ZP_05046757.1| ribosomal protein L35 [Nitrosococcus oceani AFC27]
 gi|148887086|sp|Q3JC00|RL35_NITOC RecName: Full=50S ribosomal protein L35
 gi|76882965|gb|ABA57646.1| LSU ribosomal protein L35P [Nitrosococcus oceani ATCC 19707]
 gi|207089582|gb|EDZ66853.1| ribosomal protein L35 [Nitrosococcus oceani AFC27]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK +   +   H + K+S+K  RN R   V+++AD  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTASGKFKHAQSHHNHILTKKSSKRKRNLRPLAVVSAADGPRLDR 60


>gi|315649037|ref|ZP_07902131.1| ribosomal protein L35 [Paenibacillus vortex V453]
 gi|315275718|gb|EFU39072.1| ribosomal protein L35 [Paenibacillus vortex V453]
          Length = 66

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV+   A K H +  +S +  R    + ++A  D K++
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVKRYKAYKNHLLSHKSKRAKRVLSNSPIMAPGDVKRL 58


>gi|253682638|ref|ZP_04863435.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
 gi|331269138|ref|YP_004395630.1| 50S ribosomal protein L35 [Clostridium botulinum BKT015925]
 gi|253562350|gb|EES91802.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
 gi|329125688|gb|AEB75633.1| ribosomal protein L35 [Clostridium botulinum BKT015925]
          Length = 65

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  +KV++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQ-EKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|51598450|ref|YP_072638.1| 50S ribosomal protein L35 [Borrelia garinii PBi]
 gi|219684755|ref|ZP_03539698.1| ribosomal protein L35 [Borrelia garinii PBr]
 gi|219685824|ref|ZP_03540633.1| ribosomal protein L35 [Borrelia garinii Far04]
 gi|81691579|sp|Q662H5|RL35_BORGA RecName: Full=50S ribosomal protein L35
 gi|51573021|gb|AAU07046.1| ribosomal protein L35 [Borrelia garinii PBi]
 gi|219672117|gb|EED29171.1| ribosomal protein L35 [Borrelia garinii PBr]
 gi|219672657|gb|EED29687.1| ribosomal protein L35 [Borrelia garinii Far04]
          Length = 66

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|183221769|ref|YP_001839765.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Paris)']
 gi|189911843|ref|YP_001963398.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|226725026|sp|B0SCH3|RL35_LEPBA RecName: Full=50S ribosomal protein L35
 gi|226725027|sp|B0SKZ6|RL35_LEPBP RecName: Full=50S ribosomal protein L35
 gi|76576278|gb|ABA53852.1| L35 [Leptospira biflexa serovar Patoc]
 gi|167776519|gb|ABZ94820.1| 50S Ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167780191|gb|ABZ98489.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Paris)']
          Length = 66

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KTN ++ KRF  T +GK++   A +RH + K+S K    +RG  V+   D  +V  
Sbjct: 1  MYKLKTNRAAAKRFKFTKSGKIKRGCAFRRHILEKKSPKMKHQSRGMHVIHETDYNRV-E 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 KLLPYG 65


>gi|224534361|ref|ZP_03674939.1| ribosomal protein L35 [Borrelia spielmanii A14S]
 gi|224514463|gb|EEF84779.1| ribosomal protein L35 [Borrelia spielmanii A14S]
          Length = 66

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R    L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKLGSLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|171058430|ref|YP_001790779.1| 50S ribosomal protein L35 [Leptothrix cholodnii SP-6]
 gi|226725028|sp|B1XYZ5|RL35_LEPCP RecName: Full=50S ribosomal protein L35
 gi|170775875|gb|ACB34014.1| ribosomal protein L35 [Leptothrix cholodnii SP-6]
          Length = 67

 Score = 43.9 bits (102), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RGT+ +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGTVAVHETN 54


>gi|227494665|ref|ZP_03924981.1| ribosomal protein L35 [Actinomyces coleocanis DSM 15436]
 gi|226831847|gb|EEH64230.1| ribosomal protein L35 [Actinomyces coleocanis DSM 15436]
          Length = 64

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S+   R      V+A AD K V R
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREKANKRHLLEVKSSTRTRRLSRDQVVAPADQKNVRR 60


>gi|225552397|ref|ZP_03773337.1| ribosomal protein L35 [Borrelia sp. SV1]
 gi|225371395|gb|EEH00825.1| ribosomal protein L35 [Borrelia sp. SV1]
          Length = 66

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKHKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|225375383|ref|ZP_03752604.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans
          DSM 16841]
 gi|225212872|gb|EEG95226.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans
          DSM 16841]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRSKAYKRHILTKKTTKNKRNLRKPAMVDATNVK 56


>gi|139437956|ref|ZP_01771509.1| Hypothetical protein COLAER_00495 [Collinsella aerofaciens ATCC
          25986]
 gi|133776153|gb|EBA39973.1| Hypothetical protein COLAER_00495 [Collinsella aerofaciens ATCC
          25986]
          Length = 63

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF  T TGK+    A K H + K+S K  R  R    +A+AD +KVI+
Sbjct: 1  MPKMKSHSGTKKRFRKTGTGKLMRAKAFKSHILSKKSTKRKRGFRQETEIAAAD-RKVIK 59

Query: 61 NYL 63
          + L
Sbjct: 60 SRL 62


>gi|220934624|ref|YP_002513523.1| ribosomal protein L35 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254803581|sp|B8GRI2|RL35_THISH RecName: Full=50S ribosomal protein L35
 gi|219995934|gb|ACL72536.1| ribosomal protein L35 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +G  +   + +RH + K+S K  R+ R T ++A  D K  +R
Sbjct: 1  MPKIKTNRGAAKRFKPTGSGGFKRAQSHRRHILTKKSTKRKRHLRSTGMIAECD-KASVR 59

Query: 61 NYLPN 65
            LP+
Sbjct: 60 QMLPH 64


>gi|326792020|ref|YP_004309841.1| ribosomal protein L35 [Clostridium lentocellum DSM 5427]
 gi|326542784|gb|ADZ84643.1| ribosomal protein L35 [Clostridium lentocellum DSM 5427]
          Length = 67

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KTN ++ KRF +T TGK++   A KRH + K+S K  RN R   ++ S + K++ R  
Sbjct: 5  KLKTNRAAAKRFKVTGTGKLKRNKAYKRHILTKKSTKTKRNLRKAGIVDSTNEKQMKR-I 63

Query: 63 LP 64
          LP
Sbjct: 64 LP 65


>gi|323484403|ref|ZP_08089769.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14163]
 gi|323692414|ref|ZP_08106650.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14673]
 gi|323402181|gb|EGA94513.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14163]
 gi|323503554|gb|EGB19380.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14673]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TGK+    A K H + K+S K  RN R  +V  + ++ KV++
Sbjct: 1  MPKMKTSRAAAKRFKTTGTGKLVRSKAYKSHILTKKSTKRKRNLRKDIVTDATNS-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|283782963|ref|YP_003373717.1| ribosomal protein L35 [Gardnerella vaginalis 409-05]
 gi|283441374|gb|ADB13840.1| ribosomal protein L35 [Gardnerella vaginalis 409-05]
          Length = 64

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS++ KR  +T TGKV    +  RH +  +S +  R      VLA+A +KK+
Sbjct: 1  MPKMKTNSAASKRVRLTGTGKVMHDGSAMRHNLEHKSARKRRALSEDKVLATAQSKKL 58


>gi|260592277|ref|ZP_05857735.1| ribosomal protein L35 [Prevotella veroralis F0319]
 gi|288802817|ref|ZP_06408254.1| ribosomal protein L35 [Prevotella melaninogenica D18]
 gi|260535911|gb|EEX18528.1| ribosomal protein L35 [Prevotella veroralis F0319]
 gi|288334634|gb|EFC73072.1| ribosomal protein L35 [Prevotella melaninogenica D18]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++   + K+V
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGTNLKQV 58


>gi|319943685|ref|ZP_08017966.1| 50S ribosomal protein L35 [Lautropia mirabilis ATCC 51599]
 gi|319742918|gb|EFV95324.1| 50S ribosomal protein L35 [Lautropia mirabilis ATCC 51599]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG + +  AD + +
Sbjct: 1  MPKMKTKKSASKRFRVRPGGTVKRGQAYKRHILTKKTTKVKRHLRGAVDVHEADTRSI 58


>gi|255019925|ref|ZP_05291999.1| LSU ribosomal protein L35p [Acidithiobacillus caldus ATCC 51756]
 gi|254970584|gb|EET28072.1| LSU ribosomal protein L35p [Acidithiobacillus caldus ATCC 51756]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +GK + + A   H + K+S K  R+ R T+V + +D +  +R
Sbjct: 1  MPKMKTNRGAAKRFKRTGSGKFKHRQAFLNHILTKKSTKRKRHLRHTLVTSGSD-QAALR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|94967745|ref|YP_589793.1| 50S ribosomal protein L35P [Candidatus Koribacter versatilis
          Ellin345]
 gi|94549795|gb|ABF39719.1| LSU ribosomal protein L35P [Candidatus Koribacter versatilis
          Ellin345]
          Length = 79

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KRF  TATGKV+   A KRH +  +S K  R+     +++ AD  K+ R
Sbjct: 16 MPKLKTHSGAAKRFKKTATGKVKRSKAFKRHILTSKSTKKKRHFDMEGLVSKADTPKIKR 75


>gi|312879876|ref|ZP_07739676.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
 gi|310783167|gb|EFQ23565.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR--GTMVLASADAKKV 58
          MPK+KT+S +KKRFS+T +GKV  Q  G+RH +  ++ K  R  R  G +    AD  K 
Sbjct: 1  MPKVKTHSGAKKRFSVTGSGKVVYQKNGRRHLLQCKNAKRRRRLRQQGVLTPVLADTLKQ 60

Query: 59 IRNY 62
          +  Y
Sbjct: 61 MMPY 64


>gi|302346319|ref|YP_003814617.1| ribosomal protein L35 [Prevotella melaninogenica ATCC 25845]
 gi|302151085|gb|ADK97346.1| ribosomal protein L35 [Prevotella melaninogenica ATCC 25845]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++   + K+V
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGTNLKQV 58


>gi|118572997|sp|Q1ITT1|RL35_ACIBL RecName: Full=50S ribosomal protein L35
          Length = 64

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KRF  TATGKV+   A KRH +  +S K  R+     +++ AD  K+ R
Sbjct: 1  MPKLKTHSGAAKRFKKTATGKVKRSKAFKRHILTSKSTKKKRHFDMEGLVSKADTPKIKR 60


>gi|297571533|ref|YP_003697307.1| ribosomal protein L35 [Arcanobacterium haemolyticum DSM 20595]
 gi|296931880|gb|ADH92688.1| ribosomal protein L35 [Arcanobacterium haemolyticum DSM 20595]
          Length = 64

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF  T +GK+  + AGKRH +  +S++  R       +A AD K+V
Sbjct: 1  MPKMKTHSGAKKRFRKTGSGKLMREQAGKRHLLEHKSSRRTRRLSSDQPVARADVKQV 58


>gi|291550175|emb|CBL26437.1| LSU ribosomal protein L35P [Ruminococcus torques L2-14]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K
Sbjct: 1  MPKIKTNRAAAKRFKVTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVK 56


>gi|56460505|ref|YP_155786.1| 50S ribosomal protein L35 [Idiomarina loihiensis L2TR]
 gi|81678394|sp|Q5QYN6|RL35_IDILO RecName: Full=50S ribosomal protein L35
 gi|56179515|gb|AAV82237.1| Ribosomal protein L35 [Idiomarina loihiensis L2TR]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA+G  + + +  RH + K+S K  R  R   ++  AD K V+R
Sbjct: 1  MPKMKSNKGASKRFKKTASGGFKCKQSHLRHILTKKSPKRKRQLRAKSMVHEADVKLVVR 60


>gi|317502974|ref|ZP_07961063.1| 50S ribosomal protein L35 [Prevotella salivae DSM 15606]
 gi|315665910|gb|EFV05488.1| 50S ribosomal protein L35 [Prevotella salivae DSM 15606]
          Length = 65

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF+ T +GKV+   A   H + K++ K  RN     ++  ++ K+V
Sbjct: 1  MPKVKTNSGAKKRFTFTGSGKVKRHHAYHSHILTKKTKKQKRNLVHQTLVDQSNMKQV 58


>gi|330752455|emb|CBL87405.1| ribosomal protein L35 [uncultured Flavobacteria bacterium]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKF-IRNARGTMVLASADA 55
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K  +     T+V  S +A
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKKRKLALTHSTLVHESDEA 56


>gi|320335392|ref|YP_004172103.1| 50S ribosomal protein L35 [Deinococcus maricopensis DSM 21211]
 gi|319756681|gb|ADV68438.1| 50S ribosomal protein L35 [Deinococcus maricopensis DSM 21211]
          Length = 66

 Score = 43.5 bits (101), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT  S+ +R  ITATGKV A  +GKRH    +S   IR      VLA ++  + ++
Sbjct: 1  MPKQKTKKSATRRIKITATGKVMAFKSGKRHQNTGKSGDEIRGKGQGFVLAKSEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 AMLPKG 65


>gi|255526049|ref|ZP_05392972.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|296187096|ref|ZP_06855494.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|255510235|gb|EET86552.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|296048290|gb|EFG87726.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +T TGK++   A K H + K+S K  RN R    + S   +K ++
Sbjct: 1  MPKMKTKRSAAKRFKVTGTGKLKRAKAFKSHILTKKSTKTKRNLRKAGYV-SVTQEKTMK 59

Query: 61 NYLP 64
            +P
Sbjct: 60 QLMP 63


>gi|224531683|ref|ZP_03672315.1| ribosomal protein L35 [Borrelia valaisiana VS116]
 gi|224511148|gb|EEF81554.1| ribosomal protein L35 [Borrelia valaisiana VS116]
          Length = 66

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R    L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKLGNLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|110640212|ref|YP_678255.1| 50S ribosomal protein L35 [Cytophaga hutchinsonii ATCC 33406]
 gi|118573005|sp|Q11UK1|RL35_CYTH3 RecName: Full=50S ribosomal protein L35
 gi|110282893|gb|ABG61079.1| 50S ribosomal protein L35 [Cytophaga hutchinsonii ATCC 33406]
          Length = 64

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT S +KKRF +T +GK++ ++A   H + K+S K  RN     ++++AD   V
Sbjct: 1  MPKVKTKSGAKKRFKLTGSGKIKRKSAYHSHILTKKSTKRKRNLVHAHLVSAADESNV 58


>gi|325298801|ref|YP_004258718.1| 50S ribosomal protein L35 [Bacteroides salanitronis DSM 18170]
 gi|324318354|gb|ADY36245.1| 50S ribosomal protein L35 [Bacteroides salanitronis DSM 18170]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKVKTNSGAKKRFALTGTGKIKRKHAYHSHILTKKTKKQKRN 43


>gi|307107412|gb|EFN55655.1| hypothetical protein CHLNCDRAFT_133856 [Chlorella variabilis]
          Length = 132

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT  ++ KR+ +T +GKV  + AGK+H   K+S K  RN  G MV AS   K +IR  
Sbjct: 67  KLKTRKAAAKRYKVTGSGKVVVRRAGKQHLNEKQSAKTKRNL-GKMVSASESHKNLIRKC 125

Query: 63  LP 64
           LP
Sbjct: 126 LP 127


>gi|303229398|ref|ZP_07316188.1| ribosomal protein L35 [Veillonella atypica ACS-134-V-Col7a]
 gi|303230702|ref|ZP_07317449.1| ribosomal protein L35 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514462|gb|EFL56457.1| ribosomal protein L35 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515934|gb|EFL57886.1| ribosomal protein L35 [Veillonella atypica ACS-134-V-Col7a]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A +D K+V++
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKSDYKRVVK 60

Query: 61 NYLP 64
            LP
Sbjct: 61 C-LP 63


>gi|325269095|ref|ZP_08135716.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
          multiformis DSM 16608]
 gi|324988716|gb|EGC20678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
          multiformis DSM 16608]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF+ T TGK++ + A   H + K++ K  RN     ++  ++ K+V
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRRHAFHSHILTKKTKKQKRNLVHQTLVDGSNLKQV 58


>gi|146297792|ref|YP_001192383.1| 50S ribosomal protein L35 [Flavobacterium johnsoniae UW101]
 gi|189042769|sp|A5FP03|RL35_FLAJO RecName: Full=50S ribosomal protein L35
 gi|146152210|gb|ABQ03064.1| LSU ribosomal protein L35P [Flavobacterium johnsoniae UW101]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKK 39


>gi|240168027|ref|ZP_04746686.1| 50S ribosomal protein L35 [Mycobacterium kansasii ATCC 12478]
          Length = 64

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  + +   R   G   +A+ D K+V  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLEGRTAVAANDTKRV-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NSLLNG 64


>gi|297588371|ref|ZP_06947014.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 53516]
 gi|297573744|gb|EFH92465.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 53516]
          Length = 63

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+R   A   H   K+S K IRN R    ++ AD +++
Sbjct: 1  MPKMKTHRGSAKRFRRTGTGKLRRYKAYASHLTGKKSAKRIRNLRKGTTVSDADMRRI 58


>gi|169824393|ref|YP_001692004.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 29328]
 gi|302380496|ref|ZP_07268961.1| ribosomal protein L35 [Finegoldia magna ACS-171-V-Col3]
 gi|303233884|ref|ZP_07320533.1| ribosomal protein L35 [Finegoldia magna BVS033A4]
 gi|226725012|sp|B0S174|RL35_FINM2 RecName: Full=50S ribosomal protein L35
 gi|167831198|dbj|BAG08114.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 29328]
 gi|302311439|gb|EFK93455.1| ribosomal protein L35 [Finegoldia magna ACS-171-V-Col3]
 gi|302494809|gb|EFL54566.1| ribosomal protein L35 [Finegoldia magna BVS033A4]
          Length = 63

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+R   A   H   K+S K IRN R    ++ AD K++
Sbjct: 1  MPKMKTHRGSAKRFRRTGTGKLRRFKAYASHLTGKKSAKRIRNLRKGTTVSEADMKRI 58


>gi|291544307|emb|CBL17416.1| LSU ribosomal protein L35P [Ruminococcus sp. 18P13]
          Length = 67

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T +GKV+ Q   KRH + ++  K  R ARG  +    +A   I+  
Sbjct: 5  KVKTHSGAKKRFKVTGSGKVKYQHTNKRHRLTQKDTKRKRIARGAGICDCTNA-PTIKKL 63

Query: 63 LP 64
          +P
Sbjct: 64 VP 65


>gi|313905724|ref|ZP_07839084.1| ribosomal protein L35 [Eubacterium cellulosolvens 6]
 gi|313469431|gb|EFR64773.1| ribosomal protein L35 [Eubacterium cellulosolvens 6]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++ KRF  T TGK+    A K H + K++ K  RN R   VL   + +++ R
Sbjct: 1  MPKMKTRSAAAKRFKTTGTGKIVRHKAYKSHILTKKTTKRKRNLRKATVLDQTNNRQMKR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -CLP 63


>gi|319790151|ref|YP_004151784.1| ribosomal protein L35 [Thermovibrio ammonificans HB-1]
 gi|317114653|gb|ADU97143.1| ribosomal protein L35 [Thermovibrio ammonificans HB-1]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 32/55 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADA 55
          MPK+KT  S+ KR  +TA GK++  + GK H + K+S K  RN R    L  A A
Sbjct: 1  MPKIKTRRSAAKRVKVTAKGKIKHWSPGKSHILTKKSRKRKRNLRKAKYLEGAQA 55


>gi|150389421|ref|YP_001319470.1| ribosomal protein L35 [Alkaliphilus metalliredigens QYMF]
 gi|166988029|sp|A6TNP3|RL35_ALKMQ RecName: Full=50S ribosomal protein L35
 gi|149949283|gb|ABR47811.1| ribosomal protein L35 [Alkaliphilus metalliredigens QYMF]
          Length = 63

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TG ++   A K H + K+S+K  RN R   V++  D K+ I+
Sbjct: 1  MPKMKTHRGAAKRFKKTKTGLLKRMKAYKSHILTKKSSKRKRNLRKATVVSKGDFKR-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QLLP 63


>gi|285017866|ref|YP_003375577.1| 50s ribosomal protein l35 [Xanthomonas albilineans GPE PC73]
 gi|319786723|ref|YP_004146198.1| ribosomal protein L35 [Pseudoxanthomonas suwonensis 11-1]
 gi|283473084|emb|CBA15589.1| probable 50s ribosomal protein l35 (ribosomal protein a)
          [Xanthomonas albilineans]
 gi|317465235|gb|ADV26967.1| ribosomal protein L35 [Pseudoxanthomonas suwonensis 11-1]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +A  A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQTNHVRAEDAGRLDR 60


>gi|188586437|ref|YP_001917982.1| LSU ribosomal protein L35P [Natranaerobius thermophilus
          JW/NM-WN-LF]
 gi|226725039|sp|B2A5P0|RL35_NATTJ RecName: Full=50S ribosomal protein L35
 gi|179351124|gb|ACB85394.1| LSU ribosomal protein L35P [Natranaerobius thermophilus
          JW/NM-WN-LF]
          Length = 64

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T  GK++ + A K H + K++ K  RN R   V+ +   +K I+
Sbjct: 1  MPKMKTHKGAAKRFKKTGKGKIKRRKAFKSHILTKKTPKRKRNLRKPTVMKNKAEEKRIK 60

Query: 61 NYLP 64
            LP
Sbjct: 61 RLLP 64


>gi|167749028|ref|ZP_02421155.1| hypothetical protein ANACAC_03809 [Anaerostipes caccae DSM 14662]
 gi|317472573|ref|ZP_07931892.1| ribosomal protein L35 [Anaerostipes sp. 3_2_56FAA]
 gi|167651650|gb|EDR95779.1| hypothetical protein ANACAC_03809 [Anaerostipes caccae DSM 14662]
 gi|316899982|gb|EFV21977.1| ribosomal protein L35 [Anaerostipes sp. 3_2_56FAA]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK++   A K H + K+S K  RN R + V  S +A KV++
Sbjct: 1  MPKVKTCRAAAKRFKKTGTGKLKRNKAYKSHILTKKSPKRKRNLRKSAVTDSTNA-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|206901554|ref|YP_002251026.1| ribosomal protein L35 [Dictyoglomus thermophilum H-6-12]
 gi|226724998|sp|B5YER8|RL35_DICT6 RecName: Full=50S ribosomal protein L35
 gi|206740657|gb|ACI19715.1| ribosomal protein L35 [Dictyoglomus thermophilum H-6-12]
          Length = 66

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRS 37
          M K+KT SS+ KRF +TATGK+  + AGKRH + K+S
Sbjct: 1  MSKLKTRSSAAKRFKVTATGKILHKKAGKRHNLSKKS 37


>gi|150024983|ref|YP_001295809.1| 50S ribosomal protein L35 [Flavobacterium psychrophilum JIP02/86]
 gi|166231184|sp|A6GY20|RL35_FLAPJ RecName: Full=50S ribosomal protein L35
 gi|149771524|emb|CAL42993.1| 50S ribosomal protein L35 [Flavobacterium psychrophilum JIP02/86]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKK 39


>gi|148273191|ref|YP_001222752.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
 gi|166231175|sp|A5CSK2|RL35_CLAM3 RecName: Full=50S ribosomal protein L35
 gi|147831121|emb|CAN02073.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
          Length = 64

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+S +KKRF +T TGK+  Q AG RH +  +S+           LA AD K
Sbjct: 1  MPKQKTHSGAKKRFKVTGTGKIMKQQAGMRHNLEVKSSGRKARLNQDQPLAKADMK 56


>gi|304404965|ref|ZP_07386625.1| ribosomal protein L35 [Paenibacillus curdlanolyticus YK9]
 gi|304345844|gb|EFM11678.1| ribosomal protein L35 [Paenibacillus curdlanolyticus YK9]
          Length = 66

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A+ D +++
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRFKAYRNHLLSHKSGRQKRVLAGQPLMAAGDVRRL 58


>gi|126663526|ref|ZP_01734523.1| ribosomal protein L35 [Flavobacteria bacterium BAL38]
 gi|126624474|gb|EAZ95165.1| ribosomal protein L35 [Flavobacteria bacterium BAL38]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKK 39


>gi|325263823|ref|ZP_08130556.1| ribosomal protein L35 [Clostridium sp. D5]
 gi|324030861|gb|EGB92143.1| ribosomal protein L35 [Clostridium sp. D5]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K
Sbjct: 1  MPKIKTNRAAAKRFKVTGTGKLKRNKAYKSHILTKKSTKRKRNLRHPAITDATNVK 56


>gi|91223967|ref|ZP_01259231.1| 50S ribosomal protein L35 [Vibrio alginolyticus 12G01]
 gi|262394485|ref|YP_003286339.1| 50S ribosomal protein L35p [Vibrio sp. Ex25]
 gi|91191459|gb|EAS77724.1| 50S ribosomal protein L35 [Vibrio alginolyticus 12G01]
 gi|262338079|gb|ACY51874.1| LSU ribosomal protein L35p [Vibrio sp. Ex25]
          Length = 64

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVIR 59


>gi|331090830|ref|ZP_08339676.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399689|gb|EGG79351.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  TATGK++   A K H + K+S K  RN R   +  +++ K
Sbjct: 1  MPKIKTNRAAAKRFKKTATGKLKRNKAYKSHILTKKSTKRKRNLRQATITDASNVK 56


>gi|301059175|ref|ZP_07200115.1| ribosomal protein L35 [delta proteobacterium NaphS2]
 gi|300446723|gb|EFK10548.1| ribosomal protein L35 [delta proteobacterium NaphS2]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  + +GK+    A   H + K+S K  RN R + VL SA+ K V R
Sbjct: 1  MPKMKTNRGAAKRFKTSGSGKIVRNKAFSSHILTKKSTKRKRNFRKSTVLDSANLKGVKR 60


>gi|29726815|pdb|1NWX|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Abt-773
 gi|29726846|pdb|1NWY|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Azithromycin
 gi|61680363|pdb|1XBP|3 Chain 3, Inhibition Of Peptide Bond Formation By Pleuromutilins:
          The Structure Of The 50s Ribosomal Subunit From
          Deinococcus Radiodurans In Complex With Tiamulin
          Length = 65

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++ 
Sbjct: 1  PKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MKL 59

Query: 62 YLPNG 66
           LP G
Sbjct: 60 MLPRG 64


>gi|71275165|ref|ZP_00651452.1| Ribosomal protein L35 [Xylella fastidiosa Dixon]
 gi|71898246|ref|ZP_00680420.1| Ribosomal protein L35 [Xylella fastidiosa Ann-1]
 gi|170731156|ref|YP_001776589.1| 50S ribosomal protein L35 [Xylella fastidiosa M12]
 gi|226725087|sp|B0U5E1|RL35_XYLFM RecName: Full=50S ribosomal protein L35
 gi|71163974|gb|EAO13689.1| Ribosomal protein L35 [Xylella fastidiosa Dixon]
 gi|71731985|gb|EAO34042.1| Ribosomal protein L35 [Xylella fastidiosa Ann-1]
 gi|167965949|gb|ACA12959.1| 50S ribosomal protein L35 [Xylella fastidiosa M12]
          Length = 65

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA+GK +A  A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKMKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQQNHVRAEDAGRLDR 60


>gi|82701623|ref|YP_411189.1| ribosomal protein L35 [Nitrosospira multiformis ATCC 25196]
 gi|148887085|sp|Q2YBS4|RL35_NITMU RecName: Full=50S ribosomal protein L35
 gi|82409688|gb|ABB73797.1| LSU ribosomal protein L35P [Nitrosospira multiformis ATCC 25196]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF++ A G V+   A KRH + K++ K  R  RG++ +  +D   V R
Sbjct: 1  MPKMKTKSGAAKRFTVRAGGTVKRSQAFKRHILTKKTTKSKRQLRGSVNVHFSDVASV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|291166784|gb|EFE28830.1| 50S ribosomal protein L35 [Filifactor alocis ATCC 35896]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  ++KRF +T +GK++   A K H + K+S K  RN R   ++   D  ++ R
Sbjct: 1  MPKMKTHRGAEKRFKMTGSGKLKRGKAYKSHILTKKSAKRKRNLRQAGIVTKGDQDRISR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -LLP 63


>gi|169629408|ref|YP_001703057.1| 50S ribosomal protein L35 [Mycobacterium abscessus ATCC 19977]
 gi|226725036|sp|B1MAY2|RL35_MYCA9 RecName: Full=50S ribosomal protein L35
 gi|169241375|emb|CAM62403.1| 50S ribosomal protein L35 [Mycobacterium abscessus]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T +GK+  Q A +RH +  +     R   G  V+A  DAK+V
Sbjct: 1  MPKAKTHSGASKRFRTTGSGKIVRQKANRRHLLEHKPTSRTRRLDGRAVVAENDAKRV 58


>gi|269114902|ref|YP_003302665.1| 50S ribosomal protein L35 [Mycoplasma hominis]
 gi|268322527|emb|CAX37262.1| 50S ribosomal protein L35 [Mycoplasma hominis ATCC 23114]
          Length = 62

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S  KKR SIT +GKV+   A + H    ++ K  R+AR    L+S+D K+
Sbjct: 1  MPKMKTKSGLKKRISITESGKVKRGQAFRSHLAQNKTTKQKRHARKATTLSSSDFKR 57


>gi|254518661|ref|ZP_05130717.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
 gi|226912410|gb|EEH97611.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R T  +++   +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKTAYVSTTQ-EKAMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|198284330|ref|YP_002220651.1| 50S ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC
          53993]
 gi|218667146|ref|YP_002426991.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226712603|sp|B7J7S8|RL35_ACIF2 RecName: Full=50S ribosomal protein L35
 gi|226712604|sp|B5EN55|RL35_ACIF5 RecName: Full=50S ribosomal protein L35
 gi|198248851|gb|ACH84444.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519359|gb|ACK79945.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  T +GK + + A   H + K++ K  R+ R T+V + +D +  +R
Sbjct: 1  MPKMKSNRGAAKRFKRTGSGKFKHRQAFLNHILTKKTTKRKRHLRHTLVTSGSD-QAALR 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 RMLPYG 65


>gi|149926879|ref|ZP_01915138.1| ribosomal protein L35 [Limnobacter sp. MED105]
 gi|149824431|gb|EDM83649.1| ribosomal protein L35 [Limnobacter sp. MED105]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF + ++G ++   A KRH + K++ K  R  RG   +  +D  +V R
Sbjct: 1  MPKMKTKKSASKRFLVRSSGSIKRGHAFKRHILTKKTTKSKRQLRGMETIHKSDIGRV-R 59

Query: 61 NYLP 64
          + +P
Sbjct: 60 DMMP 63


>gi|198275237|ref|ZP_03207768.1| hypothetical protein BACPLE_01396 [Bacteroides plebeius DSM
          17135]
 gi|198271820|gb|EDY96090.1| hypothetical protein BACPLE_01396 [Bacteroides plebeius DSM
          17135]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKIKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRN 43


>gi|15639835|ref|NP_219285.1| 50S ribosomal protein L35 [Treponema pallidum subsp. pallidum
          str. Nichols]
 gi|189026073|ref|YP_001933845.1| 50S ribosomal protein L35 [Treponema pallidum subsp. pallidum
          SS14]
 gi|6094064|sp|O83821|RL35_TREPA RecName: Full=50S ribosomal protein L35
 gi|226725080|sp|B2S487|RL35_TREPS RecName: Full=50S ribosomal protein L35
 gi|3323162|gb|AAC65815.1| ribosomal protein L35 (rpmI) [Treponema pallidum subsp. pallidum
          str. Nichols]
 gi|189018648|gb|ACD71266.1| ribosomal protein L35 [Treponema pallidum subsp. pallidum SS14]
 gi|291060207|gb|ADD72942.1| ribosomal protein L35 [Treponema pallidum subsp. pallidum str.
          Chicago]
          Length = 66

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT S++ KRFS+T  GKV+ +    RH + K++ K  R  R    L+  + K V R
Sbjct: 1  MAKMKTKSAAAKRFSVTGAGKVKFKKMNLRHILTKKAPKRKRKLRHAGFLSKVELKVVKR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 KLLP 64


>gi|145594426|ref|YP_001158723.1| ribosomal protein L35 [Salinispora tropica CNB-440]
 gi|189042785|sp|A4X645|RL35_SALTO RecName: Full=50S ribosomal protein L35
 gi|145303763|gb|ABP54345.1| LSU ribosomal protein L35P [Salinispora tropica CNB-440]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+++   KR  +T  GK+  Q AG RH + K+S+   R   G + +A  D K++
Sbjct: 1  MPKMKSHTGMGKRVRVTGKGKIVKQQAGLRHNLEKKSSTRTRRLTGLVEVAKPDVKRI 58


>gi|15616747|ref|NP_239959.1| 50S ribosomal protein L35 [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|219681502|ref|YP_002467887.1| 50S ribosomal protein L35 [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|219682058|ref|YP_002468442.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|257471183|ref|ZP_05635182.1| 50S ribosomal protein L35 [Buchnera aphidicola str. LSR1
          (Acyrthosiphon pisum)]
 gi|11134524|sp|P57227|RL35_BUCAI RecName: Full=50S ribosomal protein L35
 gi|254802438|sp|B8D8S8|RL35_BUCA5 RecName: Full=50S ribosomal protein L35
 gi|254802439|sp|B8D732|RL35_BUCAT RecName: Full=50S ribosomal protein L35
 gi|25295677|pir||E84944 50S ribosomal protein L35 [imported] - Buchnera sp. (strain APS)
 gi|10038810|dbj|BAB12845.1| 50S ribosomal protein L35 [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|219621791|gb|ACL29947.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|219624345|gb|ACL30500.1| 50S ribosomal protein L35 [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|311085871|gb|ADP65953.1| 50S ribosomal protein L35 [Buchnera aphidicola str. LL01
          (Acyrthosiphon pisum)]
 gi|311086442|gb|ADP66523.1| 50S ribosomal protein L35 [Buchnera aphidicola str. TLW03
          (Acyrthosiphon pisum)]
 gi|311087024|gb|ADP67104.1| 50S ribosomal protein L35 [Buchnera aphidicola str. JF99
          (Acyrthosiphon pisum)]
 gi|311087590|gb|ADP67669.1| 50S ribosomal protein L35 [Buchnera aphidicola str. JF98
          (Acyrthosiphon pisum)]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF ITA+GK + + A  RH + K++    R+ R  +++++ D  +V +
Sbjct: 1  MPKIKTLKSAAKRFKITASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSTGDMDRV-K 59

Query: 61 NYLP 64
          ++LP
Sbjct: 60 SFLP 63


>gi|262281014|ref|ZP_06058797.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus RUH2202]
 gi|299771530|ref|YP_003733556.1| 50S ribosomal protein L35 [Acinetobacter sp. DR1]
 gi|262257914|gb|EEY76649.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus RUH2202]
 gi|298701618|gb|ADI92183.1| 50S ribosomal protein L35 [Acinetobacter sp. DR1]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MPKMKTRRGAAKRFKATAHGFKRKQAF-KRHILTKKSAKRIRQLRGCVMVHVSDVNSVRR 59


>gi|255324638|ref|ZP_05365755.1| ribosomal protein L35 [Corynebacterium tuberculostearicum SK141]
 gi|311740495|ref|ZP_07714322.1| 50S ribosomal protein L35 [Corynebacterium pseudogenitalium ATCC
          33035]
 gi|255298544|gb|EET77844.1| ribosomal protein L35 [Corynebacterium tuberculostearicum SK141]
 gi|311304015|gb|EFQ80091.1| 50S ribosomal protein L35 [Corynebacterium pseudogenitalium ATCC
          33035]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + AG+RH +  + +K  R  +GT  +A  D K+V R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGRRHLLEGKPSKRTRRLKGTEAVAQPDTKRVKR 59


>gi|256379476|ref|YP_003103136.1| 50S ribosomal protein L35 [Actinosynnema mirum DSM 43827]
 gi|255923779|gb|ACU39290.1| ribosomal protein L35 [Actinosynnema mirum DSM 43827]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + KR  +T +GK+  + AGKRH + K+S+K  R   G   +A  D  ++
Sbjct: 1  MPKNKSHSGTSKRVKVTGSGKLMREKAGKRHLLEKKSSKLTRRLSGATEVAKNDVPRL 58


>gi|224826512|ref|ZP_03699613.1| ribosomal protein L35 [Lutiella nitroferrum 2002]
 gi|224601113|gb|EEG07295.1| ribosomal protein L35 [Lutiella nitroferrum 2002]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG-TMVLASADAKKVI 59
          MPKMKT SS+KKR ++   G V+   A KRH + K++ K  R  RG TMV AS  A   +
Sbjct: 1  MPKMKTKSSAKKRLNVLGGGGVKRSMAFKRHILTKKTTKNKRQLRGTTMVDASNMAS--V 58

Query: 60 RNYLP 64
          R  +P
Sbjct: 59 RAMMP 63


>gi|224023753|ref|ZP_03642119.1| hypothetical protein BACCOPRO_00469 [Bacteroides coprophilus DSM
          18228]
 gi|224016975|gb|EEF74987.1| hypothetical protein BACCOPRO_00469 [Bacteroides coprophilus DSM
          18228]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN
Sbjct: 1  MPKIKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRN 43


>gi|226355445|ref|YP_002785185.1| 50S ribosomal protein L35 [Deinococcus deserti VCD115]
 gi|259647348|sp|C1D0Q7|RL35_DEIDV RecName: Full=50S ribosomal protein L35
 gi|226317435|gb|ACO45431.1| putative 50S ribosomal protein L35 [Deinococcus deserti VCD115]
          Length = 66

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ +R  IT TGKV A  +GKRH    +S   IR      VLA ++  + ++
Sbjct: 1  MPKMKTLKSASRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKSEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LMLPKG 65


>gi|89893014|ref|YP_516501.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense Y51]
 gi|219666285|ref|YP_002456720.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense DCB-2]
 gi|148840417|sp|Q251I5|RL35_DESHY RecName: Full=50S ribosomal protein L35
 gi|254802448|sp|B8FZK1|RL35_DESHD RecName: Full=50S ribosomal protein L35
 gi|89332462|dbj|BAE82057.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense Y51]
 gi|219536545|gb|ACL18284.1| ribosomal protein L35 [Desulfitobacterium hafniense DCB-2]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+    A   H + K+S K  RN R   V+   DAK++ R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIVRHHAFTSHILEKKSPKRKRNLRKGTVMHKTDAKRIAR 60


>gi|262369838|ref|ZP_06063165.1| ribosomal protein L35 [Acinetobacter johnsonii SH046]
 gi|262374871|ref|ZP_06068105.1| ribosomal protein L35 [Acinetobacter lwoffii SH145]
 gi|262309884|gb|EEY91013.1| ribosomal protein L35 [Acinetobacter lwoffii SH145]
 gi|262314877|gb|EEY95917.1| ribosomal protein L35 [Acinetobacter johnsonii SH046]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MPKMKTRRGAAKRFKATANGFKRKQAF-KRHILTKKSAKRIRQLRGCVMVHVSDVASVRR 59


>gi|262196930|ref|YP_003268139.1| ribosomal protein L35 [Haliangium ochraceum DSM 14365]
 gi|262080277|gb|ACY16246.1| ribosomal protein L35 [Haliangium ochraceum DSM 14365]
          Length = 66

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+ S +KKRF  TA+GK R    G+RH +  +S K  R  R + ++  A   +V
Sbjct: 1  MPKMKSKSGAKKRFRATASGKFRRGTKGRRHLLTHKSPKRKRQLRKSALVDKAQHHQV 58


>gi|210615123|ref|ZP_03290454.1| hypothetical protein CLONEX_02670 [Clostridium nexile DSM 1787]
 gi|210150431|gb|EEA81440.1| hypothetical protein CLONEX_02670 [Clostridium nexile DSM 1787]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  TATGK++   A K H + K+S K  RN R   +  + + K
Sbjct: 1  MPKIKTNRAAAKRFKKTATGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVK 56


>gi|121594739|ref|YP_986635.1| 50S ribosomal protein L35 [Acidovorax sp. JS42]
 gi|222110648|ref|YP_002552912.1| 50S ribosomal protein l35 [Acidovorax ebreus TPSY]
 gi|166231147|sp|A1W8I4|RL35_ACISJ RecName: Full=50S ribosomal protein L35
 gi|254802449|sp|B9MHY0|RL35_DIAST RecName: Full=50S ribosomal protein L35
 gi|120606819|gb|ABM42559.1| LSU ribosomal protein L35P [Acidovorax sp. JS42]
 gi|221730092|gb|ACM32912.1| ribosomal protein L35 [Acidovorax ebreus TPSY]
          Length = 67

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   D
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGIVNVHEGD 54


>gi|225013014|ref|ZP_03703430.1| ribosomal protein L35 [Flavobacteria bacterium MS024-2A]
 gi|225002830|gb|EEG40810.1| ribosomal protein L35 [Flavobacteria bacterium MS024-2A]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K
Sbjct: 1  MPKMKTKSSAKKRFKLTGSGKIKRKHAFKSHILTKKSKK 39


>gi|148270332|ref|YP_001244792.1| 50S ribosomal protein L35 [Thermotoga petrophila RKU-1]
 gi|281412637|ref|YP_003346716.1| ribosomal protein L35 [Thermotoga naphthophila RKU-10]
 gi|166233048|sp|A5ILZ3|RL35_THEP1 RecName: Full=50S ribosomal protein L35
 gi|147735876|gb|ABQ47216.1| LSU ribosomal protein L35P [Thermotoga petrophila RKU-1]
 gi|281373740|gb|ADA67302.1| ribosomal protein L35 [Thermotoga naphthophila RKU-10]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF IT  GK+    A + H   K+    +R  R   V++S D  +++R
Sbjct: 1  MPKMKTNRSAAKRFRITKNGKIMRNHAYRSHKTGKKRRNTLRELRKKDVVSSTDKYRILR 60


>gi|266625014|ref|ZP_06117949.1| ribosomal protein L35 [Clostridium hathewayi DSM 13479]
 gi|315651591|ref|ZP_07904608.1| 50S ribosomal protein L35 [Eubacterium saburreum DSM 3986]
 gi|331001968|ref|ZP_08325488.1| 50S ribosomal protein L35 [Lachnospiraceae oral taxon 107 str.
          F0167]
 gi|288863094|gb|EFC95392.1| ribosomal protein L35 [Clostridium hathewayi DSM 13479]
 gi|315486150|gb|EFU76515.1| 50S ribosomal protein L35 [Eubacterium saburreum DSM 3986]
 gi|330411764|gb|EGG91169.1| 50S ribosomal protein L35 [Lachnospiraceae oral taxon 107 str.
          F0167]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R  +V  + +A KV++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNA-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|254491567|ref|ZP_05104746.1| ribosomal protein L35 [Methylophaga thiooxidans DMS010]
 gi|224463045|gb|EEF79315.1| ribosomal protein L35 [Methylophaga thiooxydans DMS010]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +S + KRF  T +GK +   A   H + K+S K  R  R T+ +  AD   V R
Sbjct: 1  MPKLKNHSGAAKRFKRTGSGKFKRSQAFTSHILTKKSTKRKRQLRSTLTICKADHMSV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 KMLPN 64


>gi|28898055|ref|NP_797660.1| 50S ribosomal protein L35 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839395|ref|ZP_01992062.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ3810]
 gi|260366357|ref|ZP_05778796.1| ribosomal protein L35 [Vibrio parahaemolyticus K5030]
 gi|260878405|ref|ZP_05890760.1| ribosomal protein L35 [Vibrio parahaemolyticus AN-5034]
 gi|260896984|ref|ZP_05905480.1| ribosomal protein L35 [Vibrio parahaemolyticus Peru-466]
 gi|260901783|ref|ZP_05910178.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ4037]
 gi|31340340|sp|Q87Q69|RL35_VIBPA RecName: Full=50S ribosomal protein L35
 gi|28806269|dbj|BAC59544.1| large subunit ribosomal protein L35 [Vibrio parahaemolyticus RIMD
          2210633]
 gi|149747090|gb|EDM58078.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ3810]
 gi|308087663|gb|EFO37358.1| ribosomal protein L35 [Vibrio parahaemolyticus Peru-466]
 gi|308091149|gb|EFO40844.1| ribosomal protein L35 [Vibrio parahaemolyticus AN-5034]
 gi|308108134|gb|EFO45674.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ4037]
 gi|308113115|gb|EFO50655.1| ribosomal protein L35 [Vibrio parahaemolyticus K5030]
 gi|328472987|gb|EGF43835.1| 50S ribosomal protein L35 [Vibrio parahaemolyticus 10329]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPRCEVAAVIR 59


>gi|15618899|ref|NP_225185.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae CWL029]
 gi|15836522|ref|NP_301046.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae J138]
 gi|16752036|ref|NP_445402.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae AR39]
 gi|33242360|ref|NP_877301.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae TW-183]
 gi|7674323|sp|Q9Z6R8|RL35_CHLPN RecName: Full=50S ribosomal protein L35
 gi|4377319|gb|AAD19128.1| L35 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|7189776|gb|AAF38653.1| ribosomal protein L35 [Chlamydophila pneumoniae AR39]
 gi|8979364|dbj|BAA99198.1| L35 ribosomal protein [Chlamydophila pneumoniae J138]
 gi|33236871|gb|AAP98958.1| ribosomal protein L35 [Chlamydophila pneumoniae TW-183]
 gi|269302792|gb|ACZ32892.1| ribosomal protein L35 [Chlamydophila pneumoniae LPCoLN]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKTN S   RF +TA+G+++    GKRH + K+S++  RN
Sbjct: 1  MPKMKTNKSVSARFKLTASGQLKRTRPGKRHKLSKKSSQEKRN 43


>gi|226944149|ref|YP_002799222.1| 50S ribosomal protein L35 [Azotobacter vinelandii DJ]
 gi|48474502|sp|Q8RQ00|RL35_AZOVI RecName: Full=50S ribosomal protein L35
 gi|259647343|sp|C1DF44|RL35_AZOVD RecName: Full=50S ribosomal protein L35
 gi|19386910|gb|AAL87032.1|AF332624_3 ribosomal protein L35 [Azotobacter vinelandii]
 gi|226719076|gb|ACO78247.1| 50S ribosomal protein L35 [Azotobacter vinelandii DJ]
          Length = 64

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF  TA+G  + + A K H + K + K  R  RGT ++  +D  KV R
Sbjct: 1  MPKMKTKSGAKKRFKPTASG-FKHKHAFKSHILTKMTTKRKRQLRGTSLMHPSDVAKVER 59


>gi|325283502|ref|YP_004256043.1| 50S ribosomal protein L35 [Deinococcus proteolyticus MRP]
 gi|324315311|gb|ADY26426.1| 50S ribosomal protein L35 [Deinococcus proteolyticus MRP]
          Length = 68

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT  S+ +R  ITATGKV A  +GKRH    +S   IR      VLA ++
Sbjct: 1  MPKMKTKKSAVRRIKITATGKVMAFKSGKRHQNTGKSGNEIRGKGKGFVLAKSE 54


>gi|254519561|ref|ZP_05131617.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
 gi|226913310|gb|EEH98511.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R T  +++   +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKTSYVSTTQ-EKAMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|269925883|ref|YP_003322506.1| ribosomal protein L35 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789543|gb|ACZ41684.1| ribosomal protein L35 [Thermobaculum terrenum ATCC BAA-798]
          Length = 66

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+K+RF IT TGK+      K H   K+S +  ++      ++ AD K+ +R
Sbjct: 1  MPKLKTNKSAKRRFKITGTGKILRTKGMKSHLRRKKSTRAKQDFDRMFEVSPADRKR-LR 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 RALPYGV 66


>gi|11465736|ref|NP_053880.1| ribosomal protein L35 [Porphyra purpurea]
 gi|1710472|sp|P51270|RK35_PORPU RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|1276736|gb|AAC08156.1| 50S ribosomal protein L35 [Porphyra purpurea]
          Length = 65

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ +  KRF ++++GK+    A K H + K+S+K  R+   T  + S DAK +  
Sbjct: 1  MPKLKTSKAIAKRFKVSSSGKILRHKASKSHLLQKKSSKHRRHLSSTCQVDSRDAKNISI 60

Query: 61 NYLP 64
          N LP
Sbjct: 61 N-LP 63


>gi|94984680|ref|YP_604044.1| 50S ribosomal protein L35 [Deinococcus geothermalis DSM 11300]
 gi|145572732|sp|Q1J0V9|RL35_DEIGD RecName: Full=50S ribosomal protein L35
 gi|94554961|gb|ABF44875.1| ribosomal protein L35 [Deinococcus geothermalis DSM 11300]
          Length = 67

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 35/66 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  +R  +TATGKV A  +GKRH    +S   IR      VLA ++  ++  
Sbjct: 1  MPKMKTKKSMTRRVKVTATGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKSEWARMKL 60

Query: 61 NYLPNG 66
            L  G
Sbjct: 61 GLLAKG 66


>gi|152983158|ref|YP_001353179.1| 50S ribosomal subunit protein A [Janthinobacterium sp. Marseille]
 gi|151283235|gb|ABR91645.1| 50S ribosomal subunit protein A [Janthinobacterium sp. Marseille]
          Length = 76

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG + +   +   V R
Sbjct: 12 MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVGVHDTNMNSV-R 70

Query: 61 NYLPN 65
            +PN
Sbjct: 71 AMMPN 75


>gi|187924730|ref|YP_001896372.1| 50S ribosomal protein L35 [Burkholderia phytofirmans PsJN]
 gi|226724978|sp|B2SZG0|RL35_BURPP RecName: Full=50S ribosomal protein L35
 gi|187715924|gb|ACD17148.1| ribosomal protein L35 [Burkholderia phytofirmans PsJN]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG+  +  AD   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSTAVHDADMNSV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|86143059|ref|ZP_01061481.1| ribosomal protein L35 [Leeuwenhoekiella blandensis MED217]
 gi|85830504|gb|EAQ48963.1| ribosomal protein L35 [Leeuwenhoekiella blandensis MED217]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 28/39 (71%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT  S+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKMKTKGSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|238018998|ref|ZP_04599424.1| hypothetical protein VEIDISOL_00860 [Veillonella dispar ATCC
          17748]
 gi|269798228|ref|YP_003312128.1| ribosomal protein L35 [Veillonella parvula DSM 2008]
 gi|282850466|ref|ZP_06259845.1| ribosomal protein L35 [Veillonella parvula ATCC 17745]
 gi|294792089|ref|ZP_06757237.1| ribosomal protein L35 [Veillonella sp. 6_1_27]
 gi|313892952|ref|ZP_07826529.1| ribosomal protein L35 [Veillonella sp. oral taxon 158 str. F0412]
 gi|237864482|gb|EEP65772.1| hypothetical protein VEIDISOL_00860 [Veillonella dispar ATCC
          17748]
 gi|269094857|gb|ACZ24848.1| ribosomal protein L35 [Veillonella parvula DSM 2008]
 gi|282579959|gb|EFB85363.1| ribosomal protein L35 [Veillonella parvula ATCC 17745]
 gi|294457319|gb|EFG25681.1| ribosomal protein L35 [Veillonella sp. 6_1_27]
 gi|313442305|gb|EFR60720.1| ribosomal protein L35 [Veillonella sp. oral taxon 158 str. F0412]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A AD K+V
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKADHKRV 58


>gi|15608780|ref|NP_216158.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Rv]
 gi|15841098|ref|NP_336135.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis CDC1551]
 gi|31792829|ref|NP_855322.1| 50S ribosomal protein L35 [Mycobacterium bovis AF2122/97]
 gi|121637550|ref|YP_977773.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Pasteur
          1173P2]
 gi|148661438|ref|YP_001282961.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|148822850|ref|YP_001287604.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis F11]
 gi|167968404|ref|ZP_02550681.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|215404056|ref|ZP_03416237.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 02_1987]
 gi|215411288|ref|ZP_03420096.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|215426961|ref|ZP_03424880.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T92]
 gi|215430534|ref|ZP_03428453.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|215445823|ref|ZP_03432575.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|218753348|ref|ZP_03532144.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis GM 1503]
 gi|219557561|ref|ZP_03536637.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T17]
 gi|224990025|ref|YP_002644712.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253799318|ref|YP_003032319.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          1435]
 gi|254231843|ref|ZP_04925170.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis C]
 gi|254364491|ref|ZP_04980537.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis str.
          Haarlem]
 gi|254550648|ref|ZP_05141095.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis '98-R604
          INH-RIF-EM']
 gi|260186590|ref|ZP_05764064.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis CPHL_A]
 gi|260200705|ref|ZP_05768196.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|260204911|ref|ZP_05772402.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis K85]
 gi|289443096|ref|ZP_06432840.1| LSU ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|289447252|ref|ZP_06436996.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CPHL_A]
 gi|289554583|ref|ZP_06443793.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          605]
 gi|289569689|ref|ZP_06449916.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T17]
 gi|289574311|ref|ZP_06454538.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis K85]
 gi|289745920|ref|ZP_06505298.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          02_1987]
 gi|289750190|ref|ZP_06509568.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T92]
 gi|289753730|ref|ZP_06513108.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|289757746|ref|ZP_06517124.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|289761793|ref|ZP_06521171.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis GM
          1503]
 gi|294996592|ref|ZP_06802283.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 210]
 gi|297634195|ref|ZP_06951975.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN 4207]
 gi|297731182|ref|ZP_06960300.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN R506]
 gi|298525140|ref|ZP_07012549.1| ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|306775829|ref|ZP_07414166.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu001]
 gi|306779642|ref|ZP_07417979.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu002]
 gi|306784373|ref|ZP_07422695.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu003]
 gi|306788742|ref|ZP_07427064.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu004]
 gi|306793078|ref|ZP_07431380.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu005]
 gi|306797459|ref|ZP_07435761.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu006]
 gi|306803338|ref|ZP_07440006.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu008]
 gi|306807920|ref|ZP_07444588.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu007]
 gi|306967737|ref|ZP_07480398.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu009]
 gi|306971935|ref|ZP_07484596.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu010]
 gi|307079651|ref|ZP_07488821.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu011]
 gi|307084223|ref|ZP_07493336.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu012]
 gi|313658514|ref|ZP_07815394.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN V2475]
 gi|54039204|sp|P66272|RL35_MYCBO RecName: Full=50S ribosomal protein L35
 gi|54041901|sp|P66271|RL35_MYCTU RecName: Full=50S ribosomal protein L35
 gi|166231198|sp|A1KJ59|RL35_MYCBP RecName: Full=50S ribosomal protein L35
 gi|166231202|sp|A5U2Z9|RL35_MYCTA RecName: Full=50S ribosomal protein L35
 gi|254802461|sp|C1ANR5|RL35_MYCBT RecName: Full=50S ribosomal protein L35
 gi|1838993|emb|CAB06636.1| Probable 50S ribosomal protein L35 RpmI [Mycobacterium
          tuberculosis H37Rv]
 gi|13881313|gb|AAK45949.1| ribosomal protein L35 [Mycobacterium tuberculosis CDC1551]
 gi|31618419|emb|CAD96337.1| 50S ribosomal protein L35 rpmI [Mycobacterium bovis AF2122/97]
 gi|121493197|emb|CAL71668.1| 50S ribosomal protein L35 rpmI [Mycobacterium bovis BCG str.
          Pasteur 1173P2]
 gi|124600902|gb|EAY59912.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis C]
 gi|134150005|gb|EBA42050.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis str.
          Haarlem]
 gi|148505590|gb|ABQ73399.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|148721377|gb|ABR06002.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis F11]
 gi|224773138|dbj|BAH25944.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253320821|gb|ACT25424.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          1435]
 gi|289416015|gb|EFD13255.1| LSU ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|289420210|gb|EFD17411.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CPHL_A]
 gi|289439215|gb|EFD21708.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          605]
 gi|289538742|gb|EFD43320.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis K85]
 gi|289543443|gb|EFD47091.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T17]
 gi|289686448|gb|EFD53936.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          02_1987]
 gi|289690777|gb|EFD58206.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T92]
 gi|289694317|gb|EFD61746.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|289709299|gb|EFD73315.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis GM
          1503]
 gi|289713310|gb|EFD77322.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|298494934|gb|EFI30228.1| ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|308215744|gb|EFO75143.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu001]
 gi|308327411|gb|EFP16262.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu002]
 gi|308330921|gb|EFP19772.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu003]
 gi|308334691|gb|EFP23542.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu004]
 gi|308338533|gb|EFP27384.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu005]
 gi|308342203|gb|EFP31054.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu006]
 gi|308345729|gb|EFP34580.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu007]
 gi|308350029|gb|EFP38880.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu008]
 gi|308354666|gb|EFP43517.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu009]
 gi|308358622|gb|EFP47473.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu010]
 gi|308362548|gb|EFP51399.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu011]
 gi|308366168|gb|EFP55019.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu012]
 gi|323719903|gb|EGB29016.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CDC1551A]
 gi|326903257|gb|EGE50190.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis W-148]
 gi|328459069|gb|AEB04492.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          4207]
          Length = 64

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH +  + +   R   G  V+A+ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRV 58


>gi|197122310|ref|YP_002134261.1| 50S ribosomal protein L35 [Anaeromyxobacter sp. K]
 gi|220917092|ref|YP_002492396.1| ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|226713815|sp|B4UAN6|RL35_ANASK RecName: Full=50S ribosomal protein L35
 gi|254802425|sp|B8J831|RL35_ANAD2 RecName: Full=50S ribosomal protein L35
 gi|196172159|gb|ACG73132.1| ribosomal protein L35 [Anaeromyxobacter sp. K]
 gi|219954946|gb|ACL65330.1| ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 67

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH-GMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  L   D KK+
Sbjct: 1  MPKLKTKSGAKKRFVPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLTPMDEKKI 59


>gi|118473237|ref|YP_888085.1| 50S ribosomal protein L35 [Mycobacterium smegmatis str. MC2 155]
 gi|166231199|sp|A0QYU7|RL35_MYCS2 RecName: Full=50S ribosomal protein L35
 gi|118174524|gb|ABK75420.1| ribosomal protein L35 [Mycobacterium smegmatis str. MC2 155]
          Length = 64

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  +  K  R   G   +++AD  ++  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRI-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NKLLNG 64


>gi|149191776|ref|ZP_01870014.1| 50S ribosomal protein L35 [Vibrio shilonii AK1]
 gi|312884192|ref|ZP_07743904.1| 50S ribosomal protein L35 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|148834356|gb|EDL51355.1| 50S ribosomal protein L35 [Vibrio shilonii AK1]
 gi|309368240|gb|EFP95780.1| 50S ribosomal protein L35 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 64

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVVR 59


>gi|291614196|ref|YP_003524353.1| ribosomal protein L35 [Sideroxydans lithotrophicus ES-1]
 gi|291584308|gb|ADE11966.1| ribosomal protein L35 [Sideroxydans lithotrophicus ES-1]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGT 47
          MPKMKT S +KKRFS+ A G ++   A KRH + K++ K  R  RG+
Sbjct: 1  MPKMKTKSGAKKRFSVRAGGSIKRGQAFKRHILTKKTTKNKRQLRGS 47


>gi|124009347|ref|ZP_01694025.1| ribosomal protein L35 [Microscilla marina ATCC 23134]
 gi|123985009|gb|EAY24960.1| ribosomal protein L35 [Microscilla marina ATCC 23134]
          Length = 63

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+K NSS+KKRF +T TGK++ + A KRH + K+  K  R    T ++  AD K V R
Sbjct: 2  KVKKNSSAKKRFKLTGTGKIKRKKAFKRHILTKKGTKQKRRLGQTGLVDKADEKLVKR 59


>gi|319777081|ref|YP_004136732.1| 50S ribosomal protein l35 [Mycoplasma fermentans M64]
 gi|464636|sp|Q05428|RL35_MYCFE RecName: Full=50S ribosomal protein L35
 gi|150150|gb|AAA25414.1| ribosomal protein L35 [Mycoplasma fermentans]
 gi|238809865|dbj|BAH69655.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038156|gb|ADV34355.1| 50S ribosomal protein L35 [Mycoplasma fermentans M64]
          Length = 62

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S+ KKR  IT TGK+  + A + H    ++ K  R AR ++ + S+D K+
Sbjct: 1  MPKMKTKSALKKRIKITGTGKIMREQAYRSHLSQNKTTKQKRQARKSVQMHSSDVKR 57


>gi|255654727|ref|ZP_05400136.1| 50S ribosomal protein L35 [Clostridium difficile QCD-23m63]
 gi|296449470|ref|ZP_06891250.1| 50S ribosomal protein L35 [Clostridium difficile NAP08]
 gi|296878207|ref|ZP_06902219.1| 50S ribosomal protein L35 [Clostridium difficile NAP07]
 gi|296261709|gb|EFH08524.1| 50S ribosomal protein L35 [Clostridium difficile NAP08]
 gi|296430776|gb|EFH16611.1| 50S ribosomal protein L35 [Clostridium difficile NAP07]
          Length = 64

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T TGK++   A K+H + K+S K   N R + +++  DAK+ I 
Sbjct: 1  MPKMKTHRGAAKRLKKTGTGKLKRAKAYKKHILTKKSAKTKMNLRKSTLVSDGDAKR-IA 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QLLP 63


>gi|77919021|ref|YP_356836.1| 50S ribosomal protein L35 [Pelobacter carbinolicus DSM 2380]
 gi|148887089|sp|Q3A4P1|RL35_PELCD RecName: Full=50S ribosomal protein L35
 gi|77545104|gb|ABA88666.1| LSU ribosomal protein L35P [Pelobacter carbinolicus DSM 2380]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +GK+R   A   H + K+S K  R  R   ++A AD K + R
Sbjct: 1  MPKIKTNRGAAKRFRKTGSGKIRRNKAFTSHILTKKSTKRKRELRQGTLVAKADQKNISR 60


>gi|183602463|ref|ZP_02963829.1| hypothetical protein BIFLAC_05450 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|219683223|ref|YP_002469606.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          AD011]
 gi|241191183|ref|YP_002968577.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          Bl-04]
 gi|241196589|ref|YP_002970144.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          DSM 10140]
 gi|254802433|sp|B8DSQ1|RL35_BIFA0 RecName: Full=50S ribosomal protein L35
 gi|183218382|gb|EDT89027.1| hypothetical protein BIFLAC_05450 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|219620873|gb|ACL29030.1| ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          AD011]
 gi|240249575|gb|ACS46515.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          Bl-04]
 gi|240251143|gb|ACS48082.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          DSM 10140]
 gi|289177293|gb|ADC84539.1| LSU ribosomal protein L35P [Bifidobacterium animalis subsp.
          lactis BB-12]
 gi|295794176|gb|ADG33711.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          V9]
          Length = 63

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT +++ KR  +TATGKV    +G RH +  +S +  R  +   VL +A AKK+
Sbjct: 1  MPKMKTKTAAAKRVRLTATGKVMHAGSGMRHNLEHKSARKRRALKRDDVLQTAQAKKM 58


>gi|84496737|ref|ZP_00995591.1| ribosomal protein L35 [Janibacter sp. HTCC2649]
 gi|84383505|gb|EAP99386.1| ribosomal protein L35 [Janibacter sp. HTCC2649]
          Length = 64

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GKV  + AG  H   +++ +  R     ++++ AD KKV
Sbjct: 1  MPKNKTHSGTKKRFRVTGSGKVMREQAGHVHKFHEKTPQKARALSKDVLVSKADVKKV 58


>gi|293363934|ref|ZP_06610670.1| ribosomal protein L35 [Mycoplasma alligatoris A21JP2]
 gi|292552424|gb|EFF41198.1| ribosomal protein L35 [Mycoplasma alligatoris A21JP2]
          Length = 62

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S+ KKR  IT TGKV  + A + H    ++ K  R +R +++++ +D K+
Sbjct: 1  MPKMKTKSALKKRIKITGTGKVMREQAYRSHLAQNKTTKQKRQSRKSVLMSKSDVKR 57


>gi|258515611|ref|YP_003191833.1| 50S ribosomal protein L35 [Desulfotomaculum acetoxidans DSM 771]
 gi|257779316|gb|ACV63210.1| ribosomal protein L35 [Desulfotomaculum acetoxidans DSM 771]
          Length = 63

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++  + KRF  TA GK++   A K H + K+S K  R  R   VL+  D K+++R
Sbjct: 1  MPKIKSHRGAAKRFKKTANGKIKGNHAFKSHILGKKSAKRKRKLRKEYVLSKPDTKRIMR 60


>gi|30248959|ref|NP_841029.1| 50S ribosomal protein L35 [Nitrosomonas europaea ATCC 19718]
 gi|54036301|sp|Q82VV3|RL35_NITEU RecName: Full=50S ribosomal protein L35
 gi|30138576|emb|CAD84867.1| Ribosomal protein L35 [Nitrosomonas europaea ATCC 19718]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF + A G ++   A KRH + K++ K  R  RG   + ++D   V R
Sbjct: 1  MPKMKTKKSAAKRFKVRAGGSIKRSQAFKRHILTKKTTKNKRQLRGVAAVHASDMVSV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 VMLP 63


>gi|111115012|ref|YP_709630.1| 50S ribosomal protein L35 [Borrelia afzelii PKo]
 gi|216264075|ref|ZP_03436069.1| ribosomal protein L35 [Borrelia afzelii ACA-1]
 gi|123341402|sp|Q0SNX4|RL35_BORAP RecName: Full=50S ribosomal protein L35
 gi|110890286|gb|ABH01454.1| ribosomal protein L35 [Borrelia afzelii PKo]
 gi|215980119|gb|EEC20941.1| ribosomal protein L35 [Borrelia afzelii ACA-1]
          Length = 66

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKR-IKTL 62

Query: 63 LP 64
          LP
Sbjct: 63 LP 64


>gi|304373306|ref|YP_003856515.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis HUB-1]
 gi|304309497|gb|ADM21977.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis HUB-1]
 gi|330723820|gb|AEC46190.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis MCLD]
          Length = 62

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT S+ KKR  +TA+GK++ + A + H    +S K  R +R   +++S+D K++
Sbjct: 1  MPKAKTKSALKKRIKVTASGKIKHKHAYRSHLAQNKSTKQKRQSRHATLMSSSDYKRI 58


>gi|189501974|ref|YP_001957691.1| hypothetical protein Aasi_0561 [Candidatus Amoebophilus asiaticus
          5a2]
 gi|226713814|sp|B3ERW0|RL35_AMOA5 RecName: Full=50S ribosomal protein L35
 gi|189497415|gb|ACE05962.1| hypothetical protein Aasi_0561 [Candidatus Amoebophilus asiaticus
          5a2]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+S +KKRF++TA GK++ + A K H + K+  K  R    T ++  +D  ++
Sbjct: 1  MPKVKTHSGAKKRFALTAKGKIKRKHAFKNHMLDKKQTKQKRRLTHTALVHKSDKSRI 58


>gi|21231896|ref|NP_637813.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|21243323|ref|NP_642905.1| 50S ribosomal protein L35 [Xanthomonas axonopodis pv. citri str.
          306]
 gi|58582808|ref|YP_201824.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|66767976|ref|YP_242738.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|78048349|ref|YP_364524.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vesicatoria
          str. 85-10]
 gi|84624682|ref|YP_452054.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|166711590|ref|ZP_02242797.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzicola
          BLS256]
 gi|188577597|ref|YP_001914526.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188991102|ref|YP_001903112.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. B100]
 gi|289661760|ref|ZP_06483341.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vasculorum
          NCPPB702]
 gi|325917699|ref|ZP_08179890.1| LSU ribosomal protein L35P [Xanthomonas vesicatoria ATCC 35937]
 gi|325927167|ref|ZP_08188430.1| LSU ribosomal protein L35P [Xanthomonas perforans 91-118]
 gi|54039210|sp|P66283|RL35_XANCP RecName: Full=50S ribosomal protein L35
 gi|54041906|sp|P66282|RL35_XANAC RecName: Full=50S ribosomal protein L35
 gi|75508130|sp|Q5GXY2|RL35_XANOR RecName: Full=50S ribosomal protein L35
 gi|81306047|sp|Q4UW55|RL35_XANC8 RecName: Full=50S ribosomal protein L35
 gi|148887127|sp|Q3BRT9|RL35_XANC5 RecName: Full=50S ribosomal protein L35
 gi|148887128|sp|Q2P0Z7|RL35_XANOM RecName: Full=50S ribosomal protein L35
 gi|226725084|sp|B0RRH1|RL35_XANCB RecName: Full=50S ribosomal protein L35
 gi|226725085|sp|B2SUM1|RL35_XANOP RecName: Full=50S ribosomal protein L35
 gi|21108865|gb|AAM37441.1| 50S ribosomal protein L35 [Xanthomonas axonopodis pv. citri str.
          306]
 gi|21113620|gb|AAM41737.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|58427402|gb|AAW76439.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|66573308|gb|AAY48718.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|78036779|emb|CAJ24472.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vesicatoria
          str. 85-10]
 gi|84368622|dbj|BAE69780.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|167732862|emb|CAP51056.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris]
 gi|188522049|gb|ACD59994.1| ribosomal protein L35 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|325536093|gb|EGD07898.1| LSU ribosomal protein L35P [Xanthomonas vesicatoria ATCC 35937]
 gi|325542480|gb|EGD13959.1| LSU ribosomal protein L35P [Xanthomonas perforans 91-118]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTNHVRAEDAGRLDR 60


>gi|203284110|ref|YP_002221850.1| 50S ribosomal protein L35 [Borrelia duttonii Ly]
 gi|203287648|ref|YP_002222663.1| 50S ribosomal protein L35 [Borrelia recurrentis A1]
 gi|226713825|sp|B5RL15|RL35_BORDL RecName: Full=50S ribosomal protein L35
 gi|226713828|sp|B5RR08|RL35_BORRA RecName: Full=50S ribosomal protein L35
 gi|201083553|gb|ACH93144.1| 50S ribosomal protein L35 [Borrelia duttonii Ly]
 gi|201084868|gb|ACH94442.1| 50S ribosomal protein L35 [Borrelia recurrentis A1]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S++KR++ T+ GKV+ +    RH + K+S K  RN   + ++++ + K+ I+
Sbjct: 1  MPKMKTCKSARKRYAFTSKGKVKYKKQNLRHILTKKSAKRKRNLGKSGLVSNVEVKR-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 TLLP 63


>gi|305664645|ref|YP_003860932.1| 50S ribosomal protein L35 [Maribacter sp. HTCC2170]
 gi|88707346|gb|EAQ99592.1| ribosomal protein L35 [Maribacter sp. HTCC2170]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 28/39 (71%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPK KT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MPKQKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 39


>gi|23335404|ref|ZP_00120640.1| COG0291: Ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|23465928|ref|NP_696531.1| 50S ribosomal protein L35 [Bifidobacterium longum NCC2705]
 gi|189439096|ref|YP_001954177.1| 50S ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|213691795|ref|YP_002322381.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|239621210|ref|ZP_04664241.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          CCUG 52486]
 gi|296454372|ref|YP_003661515.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JDM301]
 gi|312132533|ref|YP_003999872.1| rpmi [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482510|ref|ZP_07941526.1| ribosomal protein L35 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689458|ref|YP_004209192.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          157F]
 gi|322691426|ref|YP_004220996.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JCM 1217]
 gi|54036315|sp|Q8G4L2|RL35_BIFLO RecName: Full=50S ribosomal protein L35
 gi|226713823|sp|B3DQT3|RL35_BIFLD RecName: Full=50S ribosomal protein L35
 gi|254802434|sp|B7GQC3|RL35_BIFLI RecName: Full=50S ribosomal protein L35
 gi|23326637|gb|AAN25167.1| 50S ribosomal protein L35 [Bifidobacterium longum NCC2705]
 gi|189427531|gb|ACD97679.1| Ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|213523256|gb|ACJ52003.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|239515671|gb|EEQ55538.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          CCUG 52486]
 gi|291516704|emb|CBK70320.1| LSU ribosomal protein L35P [Bifidobacterium longum subsp. longum
          F8]
 gi|296183803|gb|ADH00685.1| ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JDM301]
 gi|311773467|gb|ADQ02955.1| RpmI [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916062|gb|EFV37468.1| ribosomal protein L35 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456282|dbj|BAJ66904.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JCM 1217]
 gi|320457889|dbj|BAJ68510.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|320460794|dbj|BAJ71414.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          157F]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS++ KR  IT TGKV+   +  RH +  +S +  R      VL    AKK+
Sbjct: 1  MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKL 58


>gi|37522354|ref|NP_925731.1| 50S ribosomal protein L35 [Gloeobacter violaceus PCC 7421]
 gi|54036285|sp|Q7NGV2|RL35_GLOVI RecName: Full=50S ribosomal protein L35
 gi|35213354|dbj|BAC90726.1| 50S ribosomal protein L35 [Gloeobacter violaceus PCC 7421]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KR+ +T +GK+R + AGK H +  +S    R+    + ++  D  KV R
Sbjct: 1  MPKMKTRQSAAKRYEVTGSGKLRRRRAGKNHLLQHKSAARKRSLSTKVEVSETDLYKVTR 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|126698265|ref|YP_001087162.1| 50S ribosomal protein L35 [Clostridium difficile 630]
 gi|254974300|ref|ZP_05270772.1| 50S ribosomal protein L35 [Clostridium difficile QCD-66c26]
 gi|255091697|ref|ZP_05321175.1| 50S ribosomal protein L35 [Clostridium difficile CIP 107932]
 gi|255099798|ref|ZP_05328775.1| 50S ribosomal protein L35 [Clostridium difficile QCD-63q42]
 gi|255305683|ref|ZP_05349855.1| 50S ribosomal protein L35 [Clostridium difficile ATCC 43255]
 gi|255313425|ref|ZP_05355008.1| 50S ribosomal protein L35 [Clostridium difficile QCD-76w55]
 gi|255516112|ref|ZP_05383788.1| 50S ribosomal protein L35 [Clostridium difficile QCD-97b34]
 gi|255649208|ref|ZP_05396110.1| 50S ribosomal protein L35 [Clostridium difficile QCD-37x79]
 gi|260682383|ref|YP_003213668.1| 50S ribosomal protein L35 [Clostridium difficile CD196]
 gi|260685982|ref|YP_003217115.1| 50S ribosomal protein L35 [Clostridium difficile R20291]
 gi|306519312|ref|ZP_07405659.1| 50S ribosomal protein L35 [Clostridium difficile QCD-32g58]
 gi|118573001|sp|Q189N0|RL35_CLOD6 RecName: Full=50S ribosomal protein L35
 gi|115249702|emb|CAJ67519.1| 50S ribosomal protein L35 [Clostridium difficile]
 gi|260208546|emb|CBA61207.1| 50S ribosomal protein L35 [Clostridium difficile CD196]
 gi|260211998|emb|CBE02532.1| 50S ribosomal protein L35 [Clostridium difficile R20291]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T TGK++   A K+H + K+S K   N R + +++  DAK+ I 
Sbjct: 1  MPKMKTHRGAAKRLKKTGTGKLKRAKAFKKHILTKKSAKTKMNLRKSTLVSDGDAKR-IA 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QLLP 63


>gi|163801059|ref|ZP_02194959.1| 50S ribosomal protein L35 [Vibrio sp. AND4]
 gi|159175408|gb|EDP60205.1| 50S ribosomal protein L35 [Vibrio sp. AND4]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPRCEVAAVIR 59


>gi|118573018|sp|Q21YT1|RL35_RHOFD RecName: Full=50S ribosomal protein L35
          Length = 67

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R  RG+  +   D
Sbjct: 1  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTAVHETD 54


>gi|268608874|ref|ZP_06142601.1| 50S ribosomal protein L35P [Ruminococcus flavefaciens FD-1]
          Length = 67

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF IT TGKV+ Q   KRH + ++  K  R AR   V    +A   I+  
Sbjct: 5  KVKTHSGAKKRFKITGTGKVKYQHTNKRHRLTQKDTKRKRIARNAGVADCTNA-PTIKKL 63

Query: 63 LP 64
          +P
Sbjct: 64 VP 65


>gi|320531669|ref|ZP_08032609.1| ribosomal protein L35 [Actinomyces sp. oral taxon 171 str. F0337]
 gi|325067168|ref|ZP_08125841.1| ribosomal protein L35 [Actinomyces oris K20]
 gi|326771655|ref|ZP_08230940.1| ribosomal protein L35 [Actinomyces viscosus C505]
 gi|320136089|gb|EFW28097.1| ribosomal protein L35 [Actinomyces sp. oral taxon 171 str. F0337]
 gi|326637788|gb|EGE38689.1| ribosomal protein L35 [Actinomyces viscosus C505]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S++  R       +A AD ++V
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQANKRHLLEVKSSRRKRKLSQDQPVAPADVRQV 58


>gi|224372471|ref|YP_002606843.1| ribosomal protein L35 [Nautilia profundicola AmH]
 gi|254802463|sp|B9L885|RL35_NAUPA RecName: Full=50S ribosomal protein L35
 gi|223588815|gb|ACM92551.1| ribosomal protein L35 [Nautilia profundicola AmH]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF +  +GK++  AA + H + K+S K  RN R    + S + K V
Sbjct: 1  MPKMKTNRGAAKRFKVKKSGKIKRGAAYRSHILTKKSQKRKRNLRAPKYVDSTNIKAV 58


>gi|319942327|ref|ZP_08016642.1| 50S ribosomal protein L35 [Sutterella wadsworthensis 3_1_45B]
 gi|319804200|gb|EFW01100.1| 50S ribosomal protein L35 [Sutterella wadsworthensis 3_1_45B]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF   A+G ++   A KRH +  R+ K  R+ RG + +  +D K V R
Sbjct: 1  MPKMKTKRAAAKRFKPRASGSIKRAHATKRHILSHRTTKNKRHLRGMVTVHESDIKSVKR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -MLP 63


>gi|297565684|ref|YP_003684656.1| 50S ribosomal protein L35 [Meiothermus silvanus DSM 9946]
 gi|296850133|gb|ADH63148.1| ribosomal protein L35 [Meiothermus silvanus DSM 9946]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  +K R  +TA+GKV A+  GKRH    +S   IR+   +   +  +A++V
Sbjct: 1  MPKMKTHKGAKDRVKVTASGKVIAKRPGKRHLNWHKSGSSIRSKGRSFTFSKGEAERV 58


>gi|149194091|ref|ZP_01871189.1| 50S ribosomal protein L35 [Caminibacter mediatlanticus TB-2]
 gi|149136044|gb|EDM24522.1| 50S ribosomal protein L35 [Caminibacter mediatlanticus TB-2]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF +  +GK++  +A + H + K+S K  RN R    + S + K+V
Sbjct: 1  MPKMKTNRGAAKRFKVKKSGKIKRGSAYRSHILTKKSQKRKRNLRSPKYVDSTNIKEV 58


>gi|89900132|ref|YP_522603.1| 50S ribosomal protein L35 [Rhodoferax ferrireducens T118]
 gi|89344869|gb|ABD69072.1| LSU ribosomal protein L35P [Rhodoferax ferrireducens T118]
          Length = 73

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R  RG+  +   D
Sbjct: 7  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTAVHETD 60


>gi|170721153|ref|YP_001748841.1| 50S ribosomal protein L35 [Pseudomonas putida W619]
 gi|226725052|sp|B1J6U6|RL35_PSEPW RecName: Full=50S ribosomal protein L35
 gi|169759156|gb|ACA72472.1| ribosomal protein L35 [Pseudomonas putida W619]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + A K H + K S K  R  RG+ +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTATG-FKHKHAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVAR 59


>gi|323344265|ref|ZP_08084491.1| 50S ribosomal protein L35 [Prevotella oralis ATCC 33269]
 gi|323094994|gb|EFZ37569.1| 50S ribosomal protein L35 [Prevotella oralis ATCC 33269]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTNS +KKRF  T TGK++   A   H + K++ K  RN     ++  ++ K+V
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRNHAYHSHILTKKTKKQKRNLVHQTLVDRSNMKQV 58


>gi|34811582|pdb|1PNU|3 Chain 3, Crystal Structure Of A Streptomycin Dependent Ribosome
          From Escherichia Coli, 50s Subunit Of 70s Ribosome.
          This File, 1pnu, Contains Only Molecules Of The 50s
          Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna,
          And A-Site Trna Are In The Pdb File 1pns.
 gi|34811635|pdb|1PNY|3 Chain 3, Crystal Structure Of The Wild Type Ribosome From E.
          Coli, 50s Subunit Of 70s Ribosome. This File, 1pny,
          Contains Only Molecules Of The 50s Ribosomal Subunit.
          The 30s Subunit Is In The Pdb File 1pnx.
 gi|56966373|pdb|1VOR|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966426|pdb|1VOU|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966479|pdb|1VOW|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966532|pdb|1VOY|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966585|pdb|1VP0|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400
          Length = 63

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 31/53 (58%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          PKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+
Sbjct: 1  PKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAE 53


>gi|15644339|ref|NP_229391.1| 50S ribosomal protein L35 [Thermotoga maritima MSB8]
 gi|170289043|ref|YP_001739281.1| ribosomal protein L35 [Thermotoga sp. RQ2]
 gi|7674320|sp|Q9X1S7|RL35_THEMA RecName: Full=50S ribosomal protein L35
 gi|226725078|sp|B1LBA0|RL35_THESQ RecName: Full=50S ribosomal protein L35
 gi|4982162|gb|AAD36658.1|AE001804_2 ribosomal protein L35 [Thermotoga maritima MSB8]
 gi|170176546|gb|ACB09598.1| ribosomal protein L35 [Thermotoga sp. RQ2]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+ KRF IT  GK+    A + H   K+    +R  R   V++SAD  +V+R
Sbjct: 1  MPKVKTNRSAAKRFRITKNGKIMRNHAYRSHKTGKKRRNALRALRKKDVVSSADKNRVLR 60


>gi|258544546|ref|ZP_05704780.1| 50S ribosomal protein L35 [Cardiobacterium hominis ATCC 15826]
 gi|258520177|gb|EEV89036.1| 50S ribosomal protein L35 [Cardiobacterium hominis ATCC 15826]
          Length = 62

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  TA+G  R+ +   RH + K+S K  R  RGT+++  +D K +
Sbjct: 1  MPKMKTHRGAAKRFKKTASGYKRSHSHA-RHILTKKSTKRKRGLRGTVMVHESDVKAI 57


>gi|153808045|ref|ZP_01960713.1| hypothetical protein BACCAC_02331 [Bacteroides caccae ATCC 43185]
 gi|237716080|ref|ZP_04546561.1| 50S ribosomal protein L35 [Bacteroides sp. D1]
 gi|237722135|ref|ZP_04552616.1| 50S ribosomal protein L35 [Bacteroides sp. 2_2_4]
 gi|255692012|ref|ZP_05415687.1| ribosomal protein L35 [Bacteroides finegoldii DSM 17565]
 gi|262407692|ref|ZP_06084240.1| ribosomal protein L35 [Bacteroides sp. 2_1_22]
 gi|294808460|ref|ZP_06767213.1| ribosomal protein L35 [Bacteroides xylanisolvens SD CC 1b]
 gi|298480840|ref|ZP_06999035.1| ribosomal protein L35 [Bacteroides sp. D22]
 gi|149129654|gb|EDM20868.1| hypothetical protein BACCAC_02331 [Bacteroides caccae ATCC 43185]
 gi|229443727|gb|EEO49518.1| 50S ribosomal protein L35 [Bacteroides sp. D1]
 gi|229447945|gb|EEO53736.1| 50S ribosomal protein L35 [Bacteroides sp. 2_2_4]
 gi|260622258|gb|EEX45129.1| ribosomal protein L35 [Bacteroides finegoldii DSM 17565]
 gi|262354500|gb|EEZ03592.1| ribosomal protein L35 [Bacteroides sp. 2_1_22]
 gi|294444388|gb|EFG13102.1| ribosomal protein L35 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085229|emb|CBK66752.1| LSU ribosomal protein L35P [Bacteroides xylanisolvens XB1A]
 gi|298272863|gb|EFI14429.1| ribosomal protein L35 [Bacteroides sp. D22]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKTNS SKKRF++T TGK++ + A   H
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSH 31


>gi|227505047|ref|ZP_03935096.1| 50S ribosomal protein L35 [Corynebacterium striatum ATCC 6940]
 gi|227198411|gb|EEI78459.1| 50S ribosomal protein L35 [Corynebacterium striatum ATCC 6940]
          Length = 64

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + AG+RH +  + +K  R  +GT  +A +D K+V R
Sbjct: 2  KQKTHKGTAKRVKVTGSGKLRREQAGRRHLLEGKPSKQTRRLKGTKDVAPSDVKRVKR 59


>gi|95930294|ref|ZP_01313032.1| ribosomal protein L35 [Desulfuromonas acetoxidans DSM 684]
 gi|95133757|gb|EAT15418.1| ribosomal protein L35 [Desulfuromonas acetoxidans DSM 684]
          Length = 65

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF  T TGK+R   A   H + K++ K  R+ R   ++ +AD K +
Sbjct: 1  MPKIKTNRGAAKRFRKTGTGKIRRNKAFTSHILTKKTTKRKRDLRHGTIVDAADHKNI 58


>gi|257452489|ref|ZP_05617788.1| 50S ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|257462307|ref|ZP_05626722.1| 50S ribosomal protein L35P [Fusobacterium sp. D12]
 gi|257466356|ref|ZP_05630667.1| 50S ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
 gi|315917512|ref|ZP_07913752.1| LSU ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
 gi|317059030|ref|ZP_07923515.1| LSU ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|317059974|ref|ZP_07924459.1| LSU ribosomal protein L35P [Fusobacterium sp. D12]
 gi|313684706|gb|EFS21541.1| LSU ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|313685650|gb|EFS22485.1| LSU ribosomal protein L35P [Fusobacterium sp. D12]
 gi|313691387|gb|EFS28222.1| LSU ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
          Length = 68

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K  +N+    ++ S   K+ ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIVKHSGKSHILTKKDRKR-KNSLKKDLVVSETLKRHMQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 GLLPYGV 66


>gi|253582913|ref|ZP_04860131.1| ribosomal protein L35 [Fusobacterium varium ATCC 27725]
 gi|257468673|ref|ZP_05632767.1| 50S ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
 gi|317062928|ref|ZP_07927413.1| LSU ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
 gi|251835119|gb|EES63662.1| ribosomal protein L35 [Fusobacterium varium ATCC 27725]
 gi|313688604|gb|EFS25439.1| LSU ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
          Length = 68

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +  +V+     KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIVKHSGKSHILTKKDRKRKNSLKKDLVVTDT-LKKHMQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 GLLPYGV 66


>gi|313902055|ref|ZP_07835468.1| LSU ribosomal protein L35P [Thermaerobacter subterraneus DSM
          13965]
 gi|313467664|gb|EFR63165.1| LSU ribosomal protein L35P [Thermaerobacter subterraneus DSM
          13965]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA G+ + Q + + H   K++ K +R  R   VL  AD  + +R
Sbjct: 1  MPKMKTHRGAAKRFRRTARGRFKHQRSNRGHLNEKKTGKRMRRLRQPAVLGKADT-RTVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|296135847|ref|YP_003643089.1| ribosomal protein L35 [Thiomonas intermedia K12]
 gi|295795969|gb|ADG30759.1| ribosomal protein L35 [Thiomonas intermedia K12]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D K++
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLKQI 58


>gi|194366576|ref|YP_002029186.1| 50S ribosomal protein L35 [Stenotrophomonas maltophilia R551-3]
 gi|254521900|ref|ZP_05133955.1| ribosomal protein L35 [Stenotrophomonas sp. SKA14]
 gi|226725069|sp|B4SQH2|RL35_STRM5 RecName: Full=50S ribosomal protein L35
 gi|194349380|gb|ACF52503.1| ribosomal protein L35 [Stenotrophomonas maltophilia R551-3]
 gi|219719491|gb|EED38016.1| ribosomal protein L35 [Stenotrophomonas sp. SKA14]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTGHVRAEDAGRLDR 60


>gi|90407013|ref|ZP_01215203.1| Ribosomal protein L35 [Psychromonas sp. CNPT3]
 gi|90311884|gb|EAS39979.1| Ribosomal protein L35 [Psychromonas sp. CNPT3]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G  + + +  RH + K+S K  R+ R   +++  D   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRSKSMVSKVDVASVIR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -MLP 63


>gi|190575249|ref|YP_001973094.1| putative 50S ribosomal protein L35 [Stenotrophomonas maltophilia
           K279a]
 gi|190013171|emb|CAQ46804.1| putative 50S ribosomal protein L35 [Stenotrophomonas maltophilia
           K279a]
          Length = 105

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 41  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTGHVRAEDAGRLDR 100


>gi|325919876|ref|ZP_08181866.1| LSU ribosomal protein L35P [Xanthomonas gardneri ATCC 19865]
 gi|325549660|gb|EGD20524.1| LSU ribosomal protein L35P [Xanthomonas gardneri ATCC 19865]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  +   DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTNHVRPEDAGRLDR 60


>gi|313678438|ref|YP_004056178.1| 50S ribosomal protein L35 [Mycoplasma bovis PG45]
 gi|312950667|gb|ADR25262.1| ribosomal protein L35 [Mycoplasma bovis PG45]
          Length = 62

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S+ KKR  +TATGKV  + A + H    ++ K  R +R +  + S+D K+
Sbjct: 1  MPKMKTKSALKKRIKVTATGKVMREQAYRSHLAQNKTTKQKRQSRKSAQMHSSDLKR 57


>gi|167758932|ref|ZP_02431059.1| hypothetical protein CLOSCI_01278 [Clostridium scindens ATCC
          35704]
 gi|167663339|gb|EDS07469.1| hypothetical protein CLOSCI_01278 [Clostridium scindens ATCC
          35704]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R  ++  + + K
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRKPIITDATNVK 56


>gi|298346969|ref|YP_003719656.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 43063]
 gi|304389320|ref|ZP_07371285.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
 gi|315655515|ref|ZP_07908414.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 51333]
 gi|315656578|ref|ZP_07909465.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
 gi|298237030|gb|ADI68162.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 43063]
 gi|304327438|gb|EFL94671.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
 gi|315490170|gb|EFU79796.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 51333]
 gi|315492533|gb|EFU82137.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKR  +T +GK+  +   KRH +  +S++  R      V+A AD K++
Sbjct: 1  MPKNKTHSGTKKRIRVTGSGKLMREQTNKRHLLEHKSSRRTRRLSQDQVVAPADVKRM 58


>gi|297538936|ref|YP_003674705.1| 50S ribosomal protein L35 [Methylotenera sp. 301]
 gi|297258283|gb|ADI30128.1| ribosomal protein L35 [Methylotenera sp. 301]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF     GKV+   +  RH + K++ K  R  RGT +++  D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRKLRGTAIISPTDVKRV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPT 64


>gi|51245278|ref|YP_065162.1| 50S ribosomal protein L35 [Desulfotalea psychrophila LSv54]
 gi|50876315|emb|CAG36155.1| probable 50S ribosomal protein L35 [Desulfotalea psychrophila
          LSv54]
          Length = 73

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +G+++   A   H + K+S K  R+ R   +++SAD K  I+
Sbjct: 9  MPKMKTNRGAAKRFKKTGSGRIKRGKAFTSHILTKKSTKRKRSLRQADLVSSADVKN-IK 67

Query: 61 NYLP 64
            LP
Sbjct: 68 KILP 71


>gi|153814479|ref|ZP_01967147.1| hypothetical protein RUMTOR_00692 [Ruminococcus torques ATCC
          27756]
 gi|145847973|gb|EDK24891.1| hypothetical protein RUMTOR_00692 [Ruminococcus torques ATCC
          27756]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R + +  + + K
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQSTITDATNVK 56


>gi|322419729|ref|YP_004198952.1| 50S ribosomal protein L35 [Geobacter sp. M18]
 gi|320126116|gb|ADW13676.1| ribosomal protein L35 [Geobacter sp. M18]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++A++D K + 
Sbjct: 1  MPKMKTHRGAAKRFSKTGTGKIKMAHAFTSHILTSKTRKTKRNLRKGGIVAASDHKNIC 59


>gi|288574761|ref|ZP_06393118.1| ribosomal protein L35 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570502|gb|EFC92059.1| ribosomal protein L35 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPKMKT+S +KKRFS T TGKV  + +G+ H +  ++ + +R  R   +L
Sbjct: 1  MPKMKTHSGAKKRFSFTGTGKVSYKKSGRAHILRTKNARRLRRLRQDGIL 50


>gi|153835368|ref|ZP_01988035.1| ribosomal protein L35 [Vibrio harveyi HY01]
 gi|156974366|ref|YP_001445273.1| 50S ribosomal protein L35 [Vibrio harveyi ATCC BAA-1116]
 gi|166233051|sp|A7N011|RL35_VIBHB RecName: Full=50S ribosomal protein L35
 gi|148868116|gb|EDL67280.1| ribosomal protein L35 [Vibrio harveyi HY01]
 gi|156525960|gb|ABU71046.1| hypothetical protein VIBHAR_02081 [Vibrio harveyi ATCC BAA-1116]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNALLPRCEVAAVVR 59


>gi|118573006|sp|Q6ANB9|RL35_DESPS RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +G+++   A   H + K+S K  R+ R   +++SAD K  I+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRIKRGKAFTSHILTKKSTKRKRSLRQADLVSSADVKN-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|302874881|ref|YP_003843514.1| 50S ribosomal protein L35 [Clostridium cellulovorans 743B]
 gi|307690502|ref|ZP_07632948.1| 50S ribosomal protein L35 [Clostridium cellulovorans 743B]
 gi|302577738|gb|ADL51750.1| ribosomal protein L35 [Clostridium cellulovorans 743B]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR--GTMVLASADAKKV 58
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R  G + +A   A K 
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKAGYVSVAQEKAMKK 60

Query: 59 IRNYL 63
          +  YL
Sbjct: 61 LLPYL 65


>gi|158313565|ref|YP_001506073.1| ribosomal protein L35 [Frankia sp. EAN1pec]
 gi|226725013|sp|A8LE32|RL35_FRASN RecName: Full=50S ribosomal protein L35
 gi|158108970|gb|ABW11167.1| ribosomal protein L35 [Frankia sp. EAN1pec]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 38/60 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ + KRF +T TGK+  + A + H +  ++++  R     + L+SAD +++ R
Sbjct: 1  MPKMKTHTGTGKRFRVTGTGKIMRRRANRAHLLEHKTSRRTRRLYDEVPLSSADNRRIKR 60


>gi|284045072|ref|YP_003395412.1| ribosomal protein L35 [Conexibacter woesei DSM 14684]
 gi|283949293|gb|ADB52037.1| ribosomal protein L35 [Conexibacter woesei DSM 14684]
          Length = 66

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S +KKRF ++A GKVR + A   H + K+S K  R       ++  DA +V
Sbjct: 1  MPKMKTHSGAKKRFKVSAKGKVRGRHAFTSHILEKKSPKRKRRLGRPAQISDHDAPRV 58


>gi|326317189|ref|YP_004234861.1| 50S ribosomal protein L35 [Acidovorax avenae subsp. avenae ATCC
          19860]
 gi|323374025|gb|ADX46294.1| ribosomal protein L35 [Acidovorax avenae subsp. avenae ATCC
          19860]
          Length = 67

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVTVHETN 54


>gi|225389793|ref|ZP_03759517.1| hypothetical protein CLOSTASPAR_03541 [Clostridium asparagiforme
          DSM 15981]
 gi|225044151|gb|EEG54397.1| hypothetical protein CLOSTASPAR_03541 [Clostridium asparagiforme
          DSM 15981]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R  +V  + +A +V++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNA-QVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|197301818|ref|ZP_03166888.1| hypothetical protein RUMLAC_00545 [Ruminococcus lactaris ATCC
          29176]
 gi|197299258|gb|EDY33788.1| hypothetical protein RUMLAC_00545 [Ruminococcus lactaris ATCC
          29176]
          Length = 79

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K  ++
Sbjct: 15 MPKIKTNRAAAKRFKATGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKN-MK 73

Query: 61 NYLP 64
            LP
Sbjct: 74 KVLP 77


>gi|160940542|ref|ZP_02087886.1| hypothetical protein CLOBOL_05437 [Clostridium bolteae ATCC
          BAA-613]
 gi|239625928|ref|ZP_04668959.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47_FAA]
 gi|158436502|gb|EDP14269.1| hypothetical protein CLOBOL_05437 [Clostridium bolteae ATCC
          BAA-613]
 gi|239520158|gb|EEQ60024.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47FAA]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R  +V  + ++ KV++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNS-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|324998028|ref|ZP_08119140.1| 50S ribosomal protein L35 [Pseudonocardia sp. P1]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+  + KR   T +GK+  Q AG RH +  +S K  R+  GT+ +A  D K+V
Sbjct: 1  MPKNKTHKGTAKRVRTTGSGKLMRQQAGLRHRLEVKSRKEKRDLSGTVDVAKPDVKRV 58


>gi|239814878|ref|YP_002943788.1| ribosomal protein L35 [Variovorax paradoxus S110]
 gi|319794589|ref|YP_004156229.1| ribosomal protein l35 [Variovorax paradoxus EPS]
 gi|259647365|sp|C5CUU4|RL35_VARPS RecName: Full=50S ribosomal protein L35
 gi|239801455|gb|ACS18522.1| ribosomal protein L35 [Variovorax paradoxus S110]
 gi|315597052|gb|ADU38118.1| ribosomal protein L35 [Variovorax paradoxus EPS]
          Length = 67

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVAVHETN 54


>gi|330467001|ref|YP_004404744.1| 50S ribosomal protein L35 [Verrucosispora maris AB-18-032]
 gi|328809972|gb|AEB44144.1| 50S ribosomal protein L35 [Verrucosispora maris AB-18-032]
          Length = 64

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+++ + KR  +T  GK+  Q AG RH + K+ +   R   G +  A +D K++
Sbjct: 1  MPKMKSHTGTGKRVRVTGKGKIMKQQAGLRHNLEKKPSTRTRRLTGVVEAAKSDVKRL 58


>gi|291563633|emb|CBL42449.1| LSU ribosomal protein L35P [butyrate-producing bacterium SS3/4]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TG++    A K H + K+S K  RN R  +V  + ++ KV++
Sbjct: 1  MPKMKTSRAAAKRFKKTGTGQLVRNKAYKSHILTKKSTKRKRNLRKDIVTDATNS-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|237669094|ref|ZP_04529078.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E
          BL5262]
 gi|237657442|gb|EEP54998.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E
          BL5262]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T TGK++   A K H + K+S+K  RN R    +  A  +KV++
Sbjct: 1  MPKMKSHRGAAKRFRKTGTGKLKRAKAFKSHILTKKSSKTKRNLRKAGYVCKAQ-EKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|91784426|ref|YP_559632.1| 50S ribosomal protein L35 [Burkholderia xenovorans LB400]
 gi|170695986|ref|ZP_02887124.1| ribosomal protein L35 [Burkholderia graminis C4D1M]
 gi|209516673|ref|ZP_03265526.1| ribosomal protein L35 [Burkholderia sp. H160]
 gi|295677046|ref|YP_003605570.1| ribosomal protein L35 [Burkholderia sp. CCGE1002]
 gi|296163125|ref|ZP_06845896.1| ribosomal protein L35 [Burkholderia sp. Ch1-1]
 gi|307730400|ref|YP_003907624.1| 50S ribosomal protein L35 [Burkholderia sp. CCGE1003]
 gi|323526734|ref|YP_004228887.1| 50S ribosomal protein L35 [Burkholderia sp. CCGE1001]
 gi|118573000|sp|Q13WF9|RL35_BURXL RecName: Full=50S ribosomal protein L35
 gi|91688380|gb|ABE31580.1| LSU ribosomal protein L35P [Burkholderia xenovorans LB400]
 gi|170139066|gb|EDT07256.1| ribosomal protein L35 [Burkholderia graminis C4D1M]
 gi|209502948|gb|EEA02951.1| ribosomal protein L35 [Burkholderia sp. H160]
 gi|295436889|gb|ADG16059.1| ribosomal protein L35 [Burkholderia sp. CCGE1002]
 gi|295886627|gb|EFG66474.1| ribosomal protein L35 [Burkholderia sp. Ch1-1]
 gi|307584935|gb|ADN58333.1| ribosomal protein L35 [Burkholderia sp. CCGE1003]
 gi|323383736|gb|ADX55827.1| ribosomal protein L35 [Burkholderia sp. CCGE1001]
          Length = 65

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG+  +  +D   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSTAVHDSDLNSV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|226320902|ref|ZP_03796453.1| ribosomal protein L35 [Borrelia burgdorferi 29805]
 gi|226233674|gb|EEH32404.1| ribosomal protein L35 [Borrelia burgdorferi 29805]
 gi|312149675|gb|ADQ29746.1| ribosomal protein L35 [Borrelia burgdorferi N40]
          Length = 66

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T   KV+ +    RH + K+S+K  RN R +  L+  + K+ I+  
Sbjct: 4  KMKTRKSAKKRYSFTVNSKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKR-IKTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|260438622|ref|ZP_05792438.1| ribosomal protein L35 [Butyrivibrio crossotus DSM 2876]
 gi|292809216|gb|EFF68421.1| ribosomal protein L35 [Butyrivibrio crossotus DSM 2876]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ ++ KRF +T +GK++   A K H + K++ K  RN R   ++ S + K
Sbjct: 1  MPKMKTSRAAAKRFKVTGSGKLKRNKAYKSHILTKKTTKRKRNLRKAALVDSTNEK 56


>gi|229827028|ref|ZP_04453097.1| hypothetical protein GCWU000182_02412 [Abiotrophia defectiva ATCC
          49176]
 gi|229788646|gb|EEP24760.1| hypothetical protein GCWU000182_02412 [Abiotrophia defectiva ATCC
          49176]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          MPKMKT S++ KRF +T TGK+    A K H + K++ K  RN R
Sbjct: 1  MPKMKTKSAAAKRFKVTGTGKLMKMKAYKSHILTKKTTKRKRNLR 45


>gi|209695237|ref|YP_002263166.1| 50S ribosomal protein L35 [Aliivibrio salmonicida LFI1238]
 gi|226712607|sp|B6EN32|RL35_ALISL RecName: Full=50S ribosomal protein L35
 gi|208009189|emb|CAQ79443.1| 50S ribosomal subunit protein L35 [Aliivibrio salmonicida
          LFI1238]
          Length = 64

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +LA  +   V+R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNSLLAKCEVAAVLR 59


>gi|227497642|ref|ZP_03927860.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
 gi|226832913|gb|EEH65296.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
          Length = 64

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 38/58 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S++  R      V+ +++ ++V
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQAGKRHLLEVKSSRRKRKLSKDQVVDASNLREV 58


>gi|118602647|ref|YP_903862.1| 50S ribosomal protein L35 [Candidatus Ruthia magnifica str. Cm
          (Calyptogena magnifica)]
 gi|118567586|gb|ABL02391.1| LSU ribosomal protein L35P [Candidatus Ruthia magnifica str. Cm
          (Calyptogena magnifica)]
          Length = 66

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S+   RN R   ++  AD   ++R
Sbjct: 2  MPKLKTNKGAAKRFKKTASGGYKCKHSHLRHILTKKSSSRKRNLRAPDMVEKADV-AMVR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 KMLP 64


>gi|91215266|ref|ZP_01252238.1| putative 50S ribosomal protein L35 [Psychroflexus torquis ATCC
          700755]
 gi|91186871|gb|EAS73242.1| putative 50S ribosomal protein L35 [Psychroflexus torquis ATCC
          700755]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT SS+KKRF IT TGK++ + A K H
Sbjct: 1  MPKMKTKSSAKKRFKITGTGKIKRKHAFKSH 31


>gi|291533296|emb|CBL06409.1| LSU ribosomal protein L35P [Megamonas hypermegale ART12/1]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF+ T +G+ +   A K H + K+S K  RN R   ++ +AD K+V
Sbjct: 1  MPKIKTRRAAAKRFTATGSGEFKRNKAFKSHILEKKSPKRKRNLRKAAIITAADHKRV 58


>gi|256825066|ref|YP_003149026.1| 50S ribosomal protein L35P [Kytococcus sedentarius DSM 20547]
 gi|256688459|gb|ACV06261.1| LSU ribosomal protein L35P [Kytococcus sedentarius DSM 20547]
          Length = 64

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  Q A   H   +RS+   R     + +A AD KK+
Sbjct: 1  MPKNKTHSGTKKRFRVTGSGKIMRQRARHVHKFQERSSSDARRLVNDVPVAKADEKKI 58


>gi|15837341|ref|NP_298029.1| 50S ribosomal protein L35 [Xylella fastidiosa 9a5c]
 gi|28199781|ref|NP_780095.1| 50S ribosomal protein L35 [Xylella fastidiosa Temecula1]
 gi|182682531|ref|YP_001830691.1| 50S ribosomal protein L35 [Xylella fastidiosa M23]
 gi|54039211|sp|P66285|RL35_XYLFT RecName: Full=50S ribosomal protein L35
 gi|54041907|sp|P66284|RL35_XYLFA RecName: Full=50S ribosomal protein L35
 gi|226725086|sp|B2I9P6|RL35_XYLF2 RecName: Full=50S ribosomal protein L35
 gi|9105629|gb|AAF83549.1|AE003916_3 50S ribosomal protein L35 [Xylella fastidiosa 9a5c]
 gi|28057902|gb|AAO29744.1| 50S ribosomal protein L35 [Xylella fastidiosa Temecula1]
 gi|182632641|gb|ACB93417.1| ribosomal protein L35 [Xylella fastidiosa M23]
 gi|307578809|gb|ADN62778.1| 50S ribosomal protein L35 [Xylella fastidiosa subsp. fastidiosa
          GB514]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +A  A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQQNHVRAEDAGRLDR 60


>gi|159037499|ref|YP_001536752.1| ribosomal protein L35 [Salinispora arenicola CNS-205]
 gi|189042782|sp|A8LY44|RL35_SALAI RecName: Full=50S ribosomal protein L35
 gi|157916334|gb|ABV97761.1| ribosomal protein L35 [Salinispora arenicola CNS-205]
          Length = 64

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+++   KR  +T  GK+  Q AG RH + K+ +   R   G + +A  D K++
Sbjct: 1  MPKMKSHTGMGKRVRVTGKGKIVKQQAGLRHNLEKKPSTRTRRLTGLVEVAKPDVKRI 58


>gi|317121666|ref|YP_004101669.1| 50S ribosomal protein L35P [Thermaerobacter marianensis DSM
          12885]
 gi|315591646|gb|ADU50942.1| LSU ribosomal protein L35P [Thermaerobacter marianensis DSM
          12885]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA G+ + Q + + H   K++ K +R  R   VL +AD  + +R
Sbjct: 1  MPKMKTHRGAAKRFRRTARGRFKHQRSNRGHLNEKKNAKRMRRLRQPAVLGAADT-RTVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|255994771|ref|ZP_05427906.1| ribosomal protein L35 [Eubacterium saphenum ATCC 49989]
 gi|255993484|gb|EEU03573.1| ribosomal protein L35 [Eubacterium saphenum ATCC 49989]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KMKT+  + KRF +T  GK++   A K H + K+S K  RN R   VL SAD +++
Sbjct: 4  KMKTHKGAAKRFKLTGKGKLKRGKAFKSHILTKKSQKRKRNFRKAAVLTSADERRI 59


>gi|319763195|ref|YP_004127132.1| ribosomal protein l35 [Alicycliphilus denitrificans BC]
 gi|330825389|ref|YP_004388692.1| 50S ribosomal protein L35 [Alicycliphilus denitrificans K601]
 gi|317117756|gb|ADV00245.1| ribosomal protein L35 [Alicycliphilus denitrificans BC]
 gi|329310761|gb|AEB85176.1| ribosomal protein L35 [Alicycliphilus denitrificans K601]
          Length = 67

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG + +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVAVHETN 54


>gi|161831357|ref|YP_001597173.1| 50S ribosomal protein L35 [Coxiella burnetii RSA 331]
 gi|189042765|sp|A9N8K3|RL35_COXBR RecName: Full=50S ribosomal protein L35
 gi|161763224|gb|ABX78866.1| ribosomal protein L35 [Coxiella burnetii RSA 331]
          Length = 64

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF +T +GK++  A+   H + K+S K  R  R    +A +D + V
Sbjct: 1  MPKLKTNRGAVKRFKVTGSGKIKRAASNHNHMLTKKSQKRKRRLRKIHEVAPSDMRAV 58


>gi|118580721|ref|YP_901971.1| ribosomal protein L35 [Pelobacter propionicus DSM 2379]
 gi|166199814|sp|A1ARE3|RL35_PELPD RecName: Full=50S ribosomal protein L35
 gi|118503431|gb|ABK99913.1| LSU ribosomal protein L35P [Pelobacter propionicus DSM 2379]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  +A+G+V+   A   H +  ++ K  RN RGT +++  D K + R
Sbjct: 1  MPKIKTNRGAAKRFRKSASGRVKRGNAFTSHILTHKTRKNKRNLRGTSMVSDVDQKNISR 60


>gi|323490463|ref|ZP_08095670.1| 50S ribosomal protein L35 [Planococcus donghaensis MPA1U2]
 gi|323395867|gb|EGA88706.1| 50S ribosomal protein L35 [Planococcus donghaensis MPA1U2]
          Length = 66

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++S + KRF  T TGKVR  ++   H    +S K  R  R   +++S D K++
Sbjct: 1  MPKMKSHSGASKRFKKTGTGKVRRHSSHTSHLFANKSTKQKRKLRKGKLVSSGDLKRI 58


>gi|148377739|ref|YP_001256615.1| 50S ribosomal protein L35 [Mycoplasma agalactiae PG2]
 gi|291320424|ref|YP_003515687.1| 50S ribosomal protein L35 [Mycoplasma agalactiae]
 gi|226725037|sp|A5IYR5|RL35_MYCAP RecName: Full=50S ribosomal protein L35
 gi|148291785|emb|CAL59174.1| 50S ribosomal protein L35 [Mycoplasma agalactiae PG2]
 gi|290752758|emb|CBH40733.1| 50S ribosomal protein L35 [Mycoplasma agalactiae]
          Length = 62

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S+ KKR  +TATGKV  + A + H    ++ K  R +R +  + S+D K+
Sbjct: 1  MPKMKTKSALKKRIKVTATGKVIREQAYRSHLAQNKTTKQKRQSRKSAQMHSSDLKR 57


>gi|88810667|ref|ZP_01125924.1| 50S ribosomal protein L35 [Nitrococcus mobilis Nb-231]
 gi|88792297|gb|EAR23407.1| 50S ribosomal protein L35 [Nitrococcus mobilis Nb-231]
          Length = 80

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G+ +   A   H + K+  K  R  R T ++A AD+  ++R
Sbjct: 16 MPKIKTNRGAAKRFRKTASGRYKRAHAYHNHLLTKKDPKRKRGLRATALVAPADS-AMVR 74

Query: 61 NYLP 64
            LP
Sbjct: 75 RLLP 78


>gi|78222625|ref|YP_384372.1| 50S ribosomal protein L35 [Geobacter metallireducens GS-15]
 gi|148887075|sp|Q39VS7|RL35_GEOMG RecName: Full=50S ribosomal protein L35
 gi|78193880|gb|ABB31647.1| LSU ribosomal protein L35P [Geobacter metallireducens GS-15]
          Length = 65

 Score = 41.6 bits (96), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK++  +A   H +  ++ K  R  R + ++A+ D K + R
Sbjct: 1  MPKIKTNRGAAKRFRKTASGKIKRNSAFTSHILTSKTRKRKRQLRSSSIVAAVDQKNIAR 60


>gi|46580940|ref|YP_011748.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120601759|ref|YP_966159.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris DP4]
 gi|54036269|sp|Q728R7|RL35_DESVH RecName: Full=50S ribosomal protein L35
 gi|166231182|sp|A1VBB6|RL35_DESVV RecName: Full=50S ribosomal protein L35
 gi|46450360|gb|AAS97008.1| ribosomal protein L35 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561988|gb|ABM27732.1| LSU ribosomal protein L35P [Desulfovibrio vulgaris DP4]
 gi|311234630|gb|ADP87484.1| ribosomal protein L35 [Desulfovibrio vulgaris RCH1]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRFS+T +GK R +    RH + K+S K   N  G   +  A  +K +R
Sbjct: 1  MPKIKTRRSAAKRFSVTGSGKFRRRKQNLRHILTKKSAKRKMNL-GQSAIVDATNEKAVR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 RMMP 63


>gi|260774300|ref|ZP_05883215.1| LSU ribosomal protein L35p [Vibrio metschnikovii CIP 69.14]
 gi|20139687|sp|Q9ALJ2|RL35_VIBME RecName: Full=50S ribosomal protein L35
 gi|12831414|gb|AAK02072.1| large subunit ribosomal protein L35 [Vibrio metschnikovii]
 gi|260611261|gb|EEX36465.1| LSU ribosomal protein L35p [Vibrio metschnikovii CIP 69.14]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSILPKCEVAGVMR 59


>gi|330829616|ref|YP_004392568.1| 50S ribosomal protein L35 [Aeromonas veronii B565]
 gi|328804752|gb|AEB49951.1| 50S ribosomal protein L35 [Aeromonas veronii B565]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R      ++++AD K+V+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRQLGPKFMVSAADHKRVV 59


>gi|255280784|ref|ZP_05345339.1| ribosomal protein L35 [Bryantella formatexigens DSM 14469]
 gi|255268721|gb|EET61926.1| ribosomal protein L35 [Bryantella formatexigens DSM 14469]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPKMKT+ ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K  K 
Sbjct: 1  MPKMKTSRAAAKRFKMTGTGKLKRSKAYKSHILTKKSTKRKRNLRKPAITDATNFKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|108799946|ref|YP_640143.1| 50S ribosomal protein L35 [Mycobacterium sp. MCS]
 gi|119869056|ref|YP_939008.1| 50S ribosomal protein L35 [Mycobacterium sp. KMS]
 gi|126435574|ref|YP_001071265.1| 50S ribosomal protein L35 [Mycobacterium sp. JLS]
 gi|123178639|sp|Q1B7P7|RL35_MYCSS RecName: Full=50S ribosomal protein L35
 gi|166231200|sp|A3Q0U7|RL35_MYCSJ RecName: Full=50S ribosomal protein L35
 gi|166231201|sp|A1UHB0|RL35_MYCSK RecName: Full=50S ribosomal protein L35
 gi|108770365|gb|ABG09087.1| LSU ribosomal protein L35P [Mycobacterium sp. MCS]
 gi|119695145|gb|ABL92218.1| LSU ribosomal protein L35P [Mycobacterium sp. KMS]
 gi|126235374|gb|ABN98774.1| LSU ribosomal protein L35P [Mycobacterium sp. JLS]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH M  +  K  R   G   +++ DA ++  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLMEHKPTKRTRRLAGRTQVSANDAPRI-- 58

Query: 61 NYLPNG 66
          N + NG
Sbjct: 59 NKMLNG 64


>gi|323698511|ref|ZP_08110423.1| ribosomal protein L35 [Desulfovibrio sp. ND132]
 gi|323458443|gb|EGB14308.1| ribosomal protein L35 [Desulfovibrio desulfuricans ND132]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS TATGK + +    RH + K++ K  R    +  + +A+  K +R
Sbjct: 1  MPKIKTRRAAAKRFSQTATGKFKRRRKNLRHILTKKNAKRKRRLGQSTTVDTANM-KAVR 59

Query: 61 NYLPNG 66
            LPNG
Sbjct: 60 RQLPNG 65


>gi|197118374|ref|YP_002138801.1| 50S ribosomal protein L35 [Geobacter bemidjiensis Bem]
 gi|253700846|ref|YP_003022035.1| ribosomal protein L35 [Geobacter sp. M21]
 gi|226725015|sp|B5EBY1|RL35_GEOBB RecName: Full=50S ribosomal protein L35
 gi|259647412|sp|C6DYJ3|RL35_GEOSM RecName: Full=50S ribosomal protein L35
 gi|197087734|gb|ACH39005.1| ribosomal protein L35 [Geobacter bemidjiensis Bem]
 gi|251775696|gb|ACT18277.1| ribosomal protein L35 [Geobacter sp. M21]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++A++D K +
Sbjct: 1  MPKMKTHRGAAKRFSKTGTGKIKMAHAFTSHILTSKTRKNKRNLRKGGIVAASDHKNI 58


>gi|29654622|ref|NP_820314.1| LSU ribosomal protein L35P [Coxiella burnetii RSA 493]
 gi|154706368|ref|YP_001424761.1| 50S ribosomal protein L35 [Coxiella burnetii Dugway 5J108-111]
 gi|161349055|ref|ZP_02096440.1| ribosomal protein L35 [Coxiella burnetii 'MSU Goat Q177']
 gi|212212294|ref|YP_002303230.1| 50S ribosomal protein L35 [Coxiella burnetii CbuG_Q212]
 gi|212218737|ref|YP_002305524.1| 50S ribosomal protein L35 [Coxiella burnetii CbuK_Q154]
 gi|54036303|sp|Q83C12|RL35_COXBU RecName: Full=50S ribosomal protein L35
 gi|189042764|sp|A9KGB9|RL35_COXBN RecName: Full=50S ribosomal protein L35
 gi|226724988|sp|B6J7Y0|RL35_COXB1 RecName: Full=50S ribosomal protein L35
 gi|226724989|sp|B6IZF7|RL35_COXB2 RecName: Full=50S ribosomal protein L35
 gi|29541890|gb|AAO90828.1| LSU ribosomal protein L35P [Coxiella burnetii RSA 493]
 gi|154355654|gb|ABS77116.1| LSU ribosomal protein L35P [Coxiella burnetii Dugway 5J108-111]
 gi|164601496|gb|EDQ95125.1| ribosomal protein L35 [Coxiella burnetii 'MSU Goat Q177']
 gi|212010704|gb|ACJ18085.1| LSU ribosomal protein L35P [Coxiella burnetii CbuG_Q212]
 gi|212012999|gb|ACJ20379.1| LSU ribosomal protein L35P [Coxiella burnetii CbuK_Q154]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF +T +GK++  A+   H + K+S K  R  R    +A +D + V
Sbjct: 1  MPKLKTNRGAVKRFKVTGSGKIKRAASNHNHILTKKSQKRKRRLRKIHEVAPSDMRAV 58


>gi|154502801|ref|ZP_02039861.1| hypothetical protein RUMGNA_00615 [Ruminococcus gnavus ATCC
          29149]
 gi|153796684|gb|EDN79104.1| hypothetical protein RUMGNA_00615 [Ruminococcus gnavus ATCC
          29149]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVK 56


>gi|121610035|ref|YP_997842.1| 50S ribosomal protein L35 [Verminephrobacter eiseniae EF01-2]
 gi|166233049|sp|A1WMG7|RL35_VEREI RecName: Full=50S ribosomal protein L35
 gi|121554675|gb|ABM58824.1| LSU ribosomal protein L35P [Verminephrobacter eiseniae EF01-2]
          Length = 67

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K + +  R+ RGT+ +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKMTTRNKRHLRGTVAVHETN 54


>gi|313673282|ref|YP_004051393.1| LSU ribosomal protein l35p [Calditerrivibrio nitroreducens DSM
          19672]
 gi|312940038|gb|ADR19230.1| LSU ribosomal protein L35P [Calditerrivibrio nitroreducens DSM
          19672]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GK++ + +  RH +  +S+K  R  R   +L  AD    IR
Sbjct: 1  MPKVKTHRGAAKRFKVTGSGKIKYKRSFLRHILTSKSSKRKRALRHPGILEGADCAN-IR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|115351414|ref|YP_773253.1| 50S ribosomal protein L35 [Burkholderia ambifaria AMMD]
 gi|115281402|gb|ABI86919.1| LSU ribosomal protein L35P [Burkholderia ambifaria AMMD]
          Length = 81

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 17 MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 75

Query: 61 NYLP 64
            LP
Sbjct: 76 AMLP 79


>gi|160900046|ref|YP_001565628.1| 50S ribosomal protein L35 [Delftia acidovorans SPH-1]
 gi|226724993|sp|A9C3D2|RL35_DELAS RecName: Full=50S ribosomal protein L35
 gi|160365630|gb|ABX37243.1| ribosomal protein L35 [Delftia acidovorans SPH-1]
          Length = 67

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRG 46


>gi|120611521|ref|YP_971199.1| 50S ribosomal protein L35 [Acidovorax citrulli AAC00-1]
 gi|166231144|sp|A1TR37|RL35_ACIAC RecName: Full=50S ribosomal protein L35
 gi|120589985|gb|ABM33425.1| LSU ribosomal protein L35P [Acidovorax citrulli AAC00-1]
          Length = 67

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVSVHETN 54


>gi|153855815|ref|ZP_01996801.1| hypothetical protein DORLON_02822 [Dorea longicatena DSM 13814]
 gi|149751856|gb|EDM61787.1| hypothetical protein DORLON_02822 [Dorea longicatena DSM 13814]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   + A A   K ++
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRKATI-ADATNVKNMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KVLP 63


>gi|238562603|ref|ZP_00440146.2| 50S ribosomal protein L35 [Burkholderia mallei GB8 horse 4]
 gi|251767932|ref|ZP_02268878.2| 50S ribosomal protein L35 [Burkholderia mallei PRL-20]
 gi|254180002|ref|ZP_04886601.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1655]
 gi|254199737|ref|ZP_04906103.1| 50S ribosomal protein L35 [Burkholderia mallei FMH]
 gi|254206059|ref|ZP_04912411.1| 50S ribosomal protein L35 [Burkholderia mallei JHU]
 gi|254252556|ref|ZP_04945874.1| Ribosomal protein L35 [Burkholderia dolosa AUO158]
 gi|124895165|gb|EAY69045.1| Ribosomal protein L35 [Burkholderia dolosa AUO158]
 gi|147749333|gb|EDK56407.1| 50S ribosomal protein L35 [Burkholderia mallei FMH]
 gi|147753502|gb|EDK60567.1| 50S ribosomal protein L35 [Burkholderia mallei JHU]
 gi|184210542|gb|EDU07585.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1655]
 gi|238522288|gb|EEP85733.1| 50S ribosomal protein L35 [Burkholderia mallei GB8 horse 4]
 gi|243061339|gb|EES43525.1| 50S ribosomal protein L35 [Burkholderia mallei PRL-20]
          Length = 68

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 4  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 62

Query: 61 NYLP 64
            LP
Sbjct: 63 AMLP 66


>gi|53719556|ref|YP_108542.1| 50S ribosomal protein L35 [Burkholderia pseudomallei K96243]
 gi|53725298|ref|YP_102785.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 23344]
 gi|76810161|ref|YP_333292.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710b]
 gi|78066088|ref|YP_368857.1| 50S ribosomal protein L35 [Burkholderia sp. 383]
 gi|83721518|ref|YP_443109.1| 50S ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|107022550|ref|YP_620877.1| 50S ribosomal protein L35 [Burkholderia cenocepacia AU 1054]
 gi|116689499|ref|YP_835122.1| 50S ribosomal protein L35 [Burkholderia cenocepacia HI2424]
 gi|121598724|ref|YP_992864.1| 50S ribosomal protein L35 [Burkholderia mallei SAVP1]
 gi|126442094|ref|YP_001058754.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 668]
 gi|126451250|ref|YP_001080526.1| 50S ribosomal protein L35 [Burkholderia mallei NCTC 10247]
 gi|126451610|ref|YP_001066007.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106a]
 gi|134282343|ref|ZP_01769048.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 305]
 gi|134295549|ref|YP_001119284.1| 50S ribosomal protein L35 [Burkholderia vietnamiensis G4]
 gi|167562966|ref|ZP_02355882.1| 50S ribosomal protein L35 [Burkholderia oklahomensis EO147]
 gi|167570154|ref|ZP_02363028.1| 50S ribosomal protein L35 [Burkholderia oklahomensis C6786]
 gi|167582116|ref|ZP_02374990.1| 50S ribosomal protein L35 [Burkholderia thailandensis TXDOH]
 gi|167587361|ref|ZP_02379749.1| 50S ribosomal protein L35 [Burkholderia ubonensis Bu]
 gi|167620274|ref|ZP_02388905.1| 50S ribosomal protein L35 [Burkholderia thailandensis Bt4]
 gi|167719846|ref|ZP_02403082.1| 50S ribosomal protein L35 [Burkholderia pseudomallei DM98]
 gi|167738848|ref|ZP_02411622.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 14]
 gi|167816068|ref|ZP_02447748.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 91]
 gi|167824443|ref|ZP_02455914.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 9]
 gi|167836850|ref|ZP_02463733.1| 50S ribosomal protein L35 [Burkholderia thailandensis MSMB43]
 gi|167845976|ref|ZP_02471484.1| 50S ribosomal protein L35 [Burkholderia pseudomallei B7210]
 gi|167894554|ref|ZP_02481956.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 7894]
 gi|167902957|ref|ZP_02490162.1| 50S ribosomal protein L35 [Burkholderia pseudomallei NCTC 13177]
 gi|167911194|ref|ZP_02498285.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 112]
 gi|167919218|ref|ZP_02506309.1| 50S ribosomal protein L35 [Burkholderia pseudomallei BCC215]
 gi|170701130|ref|ZP_02892104.1| ribosomal protein L35 [Burkholderia ambifaria IOP40-10]
 gi|170732804|ref|YP_001764751.1| 50S ribosomal protein L35 [Burkholderia cenocepacia MC0-3]
 gi|171318444|ref|ZP_02907599.1| ribosomal protein L35 [Burkholderia ambifaria MEX-5]
 gi|172060453|ref|YP_001808105.1| 50S ribosomal protein L35 [Burkholderia ambifaria MC40-6]
 gi|186476314|ref|YP_001857784.1| 50S ribosomal protein L35 [Burkholderia phymatum STM815]
 gi|189350302|ref|YP_001945930.1| 50S ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
 gi|206559849|ref|YP_002230613.1| 50S ribosomal protein L35 [Burkholderia cenocepacia J2315]
 gi|217423611|ref|ZP_03455112.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 576]
 gi|221197735|ref|ZP_03570781.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2M]
 gi|221204707|ref|ZP_03577724.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2]
 gi|221214902|ref|ZP_03587870.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD1]
 gi|226199698|ref|ZP_03795251.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pakistan 9]
 gi|237812018|ref|YP_002896469.1| ribosomal protein L35 [Burkholderia pseudomallei MSHR346]
 gi|238027729|ref|YP_002911960.1| 50S ribosomal protein L35 [Burkholderia glumae BGR1]
 gi|242314699|ref|ZP_04813715.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106b]
 gi|254177553|ref|ZP_04884208.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 10399]
 gi|254188584|ref|ZP_04895095.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pasteur
          52237]
 gi|254197341|ref|ZP_04903763.1| 50S ribosomal protein L35 [Burkholderia pseudomallei S13]
 gi|254261827|ref|ZP_04952881.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710a]
 gi|254297837|ref|ZP_04965290.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 406e]
 gi|254358430|ref|ZP_04974703.1| 50S ribosomal protein L35 [Burkholderia mallei 2002721280]
 gi|257139338|ref|ZP_05587600.1| 50S ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|330816671|ref|YP_004360376.1| 50S ribosomal protein L35 [Burkholderia gladioli BSR3]
 gi|81685103|sp|Q62KI4|RL35_BURMA RecName: Full=50S ribosomal protein L35
 gi|81690334|sp|Q63TM4|RL35_BURPS RecName: Full=50S ribosomal protein L35
 gi|124078993|sp|Q1BWV1|RL35_BURCA RecName: Full=50S ribosomal protein L35
 gi|148887066|sp|Q3JT11|RL35_BURP1 RecName: Full=50S ribosomal protein L35
 gi|148887067|sp|Q39H53|RL35_BURS3 RecName: Full=50S ribosomal protein L35
 gi|148887068|sp|Q2SVE0|RL35_BURTA RecName: Full=50S ribosomal protein L35
 gi|166231161|sp|A0K6V2|RL35_BURCH RecName: Full=50S ribosomal protein L35
 gi|166231162|sp|A3MJU0|RL35_BURM7 RecName: Full=50S ribosomal protein L35
 gi|166231163|sp|A1V3R1|RL35_BURMS RecName: Full=50S ribosomal protein L35
 gi|166231164|sp|A3NUI6|RL35_BURP0 RecName: Full=50S ribosomal protein L35
 gi|166231165|sp|A3N8T3|RL35_BURP6 RecName: Full=50S ribosomal protein L35
 gi|166231166|sp|A4JDU6|RL35_BURVG RecName: Full=50S ribosomal protein L35
 gi|226713830|sp|B1YP15|RL35_BURA4 RecName: Full=50S ribosomal protein L35
 gi|226723582|sp|B1K093|RL35_BURCC RecName: Full=50S ribosomal protein L35
 gi|226724976|sp|B4E7I7|RL35_BURCJ RecName: Full=50S ribosomal protein L35
 gi|226724977|sp|B2JJJ5|RL35_BURP8 RecName: Full=50S ribosomal protein L35
 gi|52209970|emb|CAH35942.1| 50S ribosomal protein L35 [Burkholderia pseudomallei K96243]
 gi|52428721|gb|AAU49314.1| ribosomal protein L35 [Burkholderia mallei ATCC 23344]
 gi|76579614|gb|ABA49089.1| ribosomal protein L35 [Burkholderia pseudomallei 1710b]
 gi|77966833|gb|ABB08213.1| LSU ribosomal protein L35P [Burkholderia sp. 383]
 gi|83655343|gb|ABC39406.1| ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|105892739|gb|ABF75904.1| LSU ribosomal protein L35P [Burkholderia cenocepacia AU 1054]
 gi|116647588|gb|ABK08229.1| LSU ribosomal protein L35P [Burkholderia cenocepacia HI2424]
 gi|121227534|gb|ABM50052.1| 50S ribosomal protein L35 [Burkholderia mallei SAVP1]
 gi|126221587|gb|ABN85093.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 668]
 gi|126225252|gb|ABN88792.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106a]
 gi|126244120|gb|ABO07213.1| 50S ribosomal protein L35 [Burkholderia mallei NCTC 10247]
 gi|134138706|gb|ABO54449.1| LSU ribosomal protein L35P [Burkholderia vietnamiensis G4]
 gi|134246381|gb|EBA46470.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 305]
 gi|148027557|gb|EDK85578.1| 50S ribosomal protein L35 [Burkholderia mallei 2002721280]
 gi|157807063|gb|EDO84233.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 406e]
 gi|157936263|gb|EDO91933.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pasteur
          52237]
 gi|160698592|gb|EDP88562.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 10399]
 gi|169654082|gb|EDS86775.1| 50S ribosomal protein L35 [Burkholderia pseudomallei S13]
 gi|169816046|gb|ACA90629.1| ribosomal protein L35 [Burkholderia cenocepacia MC0-3]
 gi|170133952|gb|EDT02306.1| ribosomal protein L35 [Burkholderia ambifaria IOP40-10]
 gi|171096358|gb|EDT41260.1| ribosomal protein L35 [Burkholderia ambifaria MEX-5]
 gi|171992970|gb|ACB63889.1| ribosomal protein L35 [Burkholderia ambifaria MC40-6]
 gi|184192773|gb|ACC70738.1| ribosomal protein L35 [Burkholderia phymatum STM815]
 gi|189334324|dbj|BAG43394.1| large subunit ribosomal protein L35 [Burkholderia multivorans
          ATCC 17616]
 gi|198035890|emb|CAR51782.1| 50S ribosomal protein L35 [Burkholderia cenocepacia J2315]
 gi|217393469|gb|EEC33490.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 576]
 gi|221165129|gb|EED97607.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD1]
 gi|221175564|gb|EEE07994.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2]
 gi|221181667|gb|EEE14068.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2M]
 gi|225928284|gb|EEH24318.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pakistan 9]
 gi|237503387|gb|ACQ95705.1| ribosomal protein L35 [Burkholderia pseudomallei MSHR346]
 gi|237876923|gb|ACR29256.1| Ribosomal protein L35 [Burkholderia glumae BGR1]
 gi|242137938|gb|EES24340.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106b]
 gi|254220516|gb|EET09900.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710a]
 gi|325528725|gb|EGD05795.1| 50S ribosomal protein L35 [Burkholderia sp. TJI49]
 gi|327369064|gb|AEA60420.1| 50S ribosomal protein L35 [Burkholderia gladioli BSR3]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 AMLP 63


>gi|117618221|ref|YP_856848.1| ribosomal protein L35 [Aeromonas hydrophila subsp. hydrophila
          ATCC 7966]
 gi|166231149|sp|A0KKP7|RL35_AERHH RecName: Full=50S ribosomal protein L35
 gi|117559628|gb|ABK36576.1| ribosomal protein L35 [Aeromonas hydrophila subsp. hydrophila
          ATCC 7966]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R       +++AD K+V+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRQLGPKFFVSAADHKRVV 59


>gi|292493205|ref|YP_003528644.1| ribosomal protein L35 [Nitrosococcus halophilus Nc4]
 gi|291581800|gb|ADE16257.1| ribosomal protein L35 [Nitrosococcus halophilus Nc4]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TATGK +   +   H + K+S+K  RN R   ++ ++D  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTATGKFKRAQSHHNHILTKKSSKRKRNLRPLAMVKASDGPRLNR 60


>gi|317153728|ref|YP_004121776.1| 50S ribosomal protein L35 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943979|gb|ADU63030.1| ribosomal protein L35 [Desulfovibrio aespoeensis Aspo-2]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS TA+GK + +    RH + K++ K  R   G   L  +   K +R
Sbjct: 1  MPKIKTRRAAAKRFSKTASGKFKRRRKNLRHILTKKNAKRKRRL-GQSTLVDSTNMKAVR 59

Query: 61 NYLPNG 66
            LPNG
Sbjct: 60 RQLPNG 65


>gi|134095004|ref|YP_001100079.1| 50S ribosomal protein L35 [Herminiimonas arsenicoxydans]
 gi|166231191|sp|A4G617|RL35_HERAR RecName: Full=50S ribosomal protein L35
 gi|133738907|emb|CAL61954.1| 50S ribosomal protein L35 [Herminiimonas arsenicoxydans]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R  RG++ +   +   V R
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSVGVHDTNMVSV-R 59

Query: 61 NYLPN 65
            +PN
Sbjct: 60 AMMPN 64


>gi|23099606|ref|NP_693072.1| 50S ribosomal protein L35 [Oceanobacillus iheyensis HTE831]
 gi|54036312|sp|Q8EPF6|RL35_OCEIH RecName: Full=50S ribosomal protein L35
 gi|22777836|dbj|BAC14107.1| 50S ribosomal protein L35 [Oceanobacillus iheyensis HTE831]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GKV+   A   H    +S K  R  R + +++S D K+ I+
Sbjct: 1  MPKMKTHKGTAKRFKKTGSGKVKRSHAYTSHMFANKSQKQKRKLRKSALVSSGDYKR-IK 59

Query: 61 NYLP 64
          + LP
Sbjct: 60 DMLP 63


>gi|290999971|ref|XP_002682553.1| predicted protein [Naegleria gruberi]
 gi|284096180|gb|EFC49809.1| predicted protein [Naegleria gruberi]
          Length = 111

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKVIR 60
           +KT +S+KKRF IT +GK++ + AGKRH    ++ K + R  +  +V+   D KK+ R
Sbjct: 48  LKTKTSAKKRFRITGSGKIKRKQAGKRHHAWSKNRKRLNRLGKTVLVVCKGDKKKLKR 105


>gi|241764280|ref|ZP_04762310.1| ribosomal protein L35 [Acidovorax delafieldii 2AN]
 gi|241366349|gb|EER60879.1| ribosomal protein L35 [Acidovorax delafieldii 2AN]
          Length = 67

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRG 46


>gi|28869577|ref|NP_792196.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato str.
          DC3000]
 gi|66045404|ref|YP_235245.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae
          B728a]
 gi|70729483|ref|YP_259221.1| 50S ribosomal protein L35 [Pseudomonas fluorescens Pf-5]
 gi|71735557|ref|YP_274356.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. phaseolicola
          1448A]
 gi|77458160|ref|YP_347665.1| 50S ribosomal protein L35 [Pseudomonas fluorescens Pf0-1]
 gi|213970493|ref|ZP_03398620.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato T1]
 gi|229591577|ref|YP_002873696.1| 50S ribosomal protein L35 [Pseudomonas fluorescens SBW25]
 gi|237801013|ref|ZP_04589474.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. oryzae str.
          1_6]
 gi|257486170|ref|ZP_05640211.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tabaci ATCC
          11528]
 gi|289623634|ref|ZP_06456588.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          NCPPB3681]
 gi|289647148|ref|ZP_06478491.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          2250]
 gi|289673300|ref|ZP_06494190.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae FF5]
 gi|298486703|ref|ZP_07004760.1| LSU ribosomal protein L35p [Pseudomonas savastanoi pv. savastanoi
          NCPPB 3335]
 gi|301384176|ref|ZP_07232594.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato Max13]
 gi|302062684|ref|ZP_07254225.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato K40]
 gi|302132641|ref|ZP_07258631.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato NCPPB
          1108]
 gi|302187615|ref|ZP_07264288.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae 642]
 gi|312961941|ref|ZP_07776438.1| 50S ribosomal protein L35 [Pseudomonas fluorescens WH6]
 gi|330810591|ref|YP_004355053.1| 50S ribosomal protein L35 [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
 gi|60393718|sp|P0A163|RL35_PSESM RecName: Full=50S ribosomal protein L35
 gi|60393719|sp|P0A164|RL35_PSESY RecName: Full=50S ribosomal protein L35
 gi|81308307|sp|Q4ZUG5|RL35_PSEU2 RecName: Full=50S ribosomal protein L35
 gi|126352247|sp|Q3KEY0|RL35_PSEPF RecName: Full=50S ribosomal protein L35
 gi|148887093|sp|Q48JS1|RL35_PSE14 RecName: Full=50S ribosomal protein L35
 gi|148887094|sp|Q4KEW2|RL35_PSEF5 RecName: Full=50S ribosomal protein L35
 gi|259647361|sp|C3JZN5|RL35_PSEFS RecName: Full=50S ribosomal protein L35
 gi|4972785|gb|AAD34788.1|AF136400_2 ribosomal protein L35 [Pseudomonas fluorescens]
 gi|1171433|gb|AAB05015.1| ribosomal protein L35 [Pseudomonas syringae pv. syringae]
 gi|28852819|gb|AAO55891.1| ribosomal protein L35 [Pseudomonas syringae pv. tomato str.
          DC3000]
 gi|63256111|gb|AAY37207.1| Ribosomal protein L35 [Pseudomonas syringae pv. syringae B728a]
 gi|68343782|gb|AAY91388.1| ribosomal protein L35 [Pseudomonas fluorescens Pf-5]
 gi|71556110|gb|AAZ35321.1| ribosomal protein L35 [Pseudomonas syringae pv. phaseolicola
          1448A]
 gi|77382163|gb|ABA73676.1| putative 50S ribosomal protein L35 [Pseudomonas fluorescens
          Pf0-1]
 gi|213924664|gb|EEB58232.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato T1]
 gi|229363443|emb|CAY50641.1| putative 50S ribosomal protein L35 [Pseudomonas fluorescens
          SBW25]
 gi|298158786|gb|EFH99849.1| LSU ribosomal protein L35p [Pseudomonas savastanoi pv. savastanoi
          NCPPB 3335]
 gi|311283751|gb|EFQ62335.1| 50S ribosomal protein L35 [Pseudomonas fluorescens WH6]
 gi|320324304|gb|EFW80383.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          B076]
 gi|320328574|gb|EFW84576.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          race 4]
 gi|327378699|gb|AEA70049.1| putative 50S ribosomal protein L35 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|330867697|gb|EGH02406.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          0893_23]
 gi|330876791|gb|EGH10940.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. morsprunorum
          str. M302280PT]
 gi|330885568|gb|EGH19717.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          race 4]
 gi|330943373|gb|EGH45742.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. pisi str.
          1704B]
 gi|330951868|gb|EGH52128.1| 50S ribosomal protein L35 [Pseudomonas syringae Cit 7]
 gi|330967296|gb|EGH67556.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. actinidiae
          str. M302091]
 gi|330973949|gb|EGH74015.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aceris str.
          M302273PT]
 gi|330977711|gb|EGH77614.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aptata str.
          DSM 50252]
 gi|330989239|gb|EGH87342.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. lachrymans
          str. M301315]
 gi|331010500|gb|EGH90556.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tabaci ATCC
          11528]
 gi|331016137|gb|EGH96193.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. lachrymans
          str. M302278PT]
 gi|331023870|gb|EGI03927.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. oryzae str.
          1_6]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K S K  R  RG+ +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTANG-IKHKHAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVER 59


>gi|296436390|gb|ADH18564.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/9768]
 gi|296438249|gb|ADH20410.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/11074]
 gi|297140750|gb|ADH97508.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/9301]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMK+N S   RF +T +G+++    GKRH + KRS++  RN
Sbjct: 1  MPKMKSNKSVATRFKLTGSGQLKRTRPGKRHKLSKRSSQQKRN 43


>gi|317500521|ref|ZP_07958744.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089379|ref|ZP_08338278.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898110|gb|EFV20158.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404747|gb|EGG84285.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 65

 Score = 41.2 bits (95), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN +  KRF  T TGK++   A K H + K+S K  RN R + +  + + K
Sbjct: 1  MPKIKTNRAVAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQSTITDATNVK 56


>gi|149912408|ref|ZP_01900951.1| ribosomal protein L35 [Moritella sp. PE36]
 gi|149804511|gb|EDM64600.1| ribosomal protein L35 [Moritella sp. PE36]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+N  + KRF  TA G  R Q+   RH + K+S K  R+ RGT ++A  D   V R
Sbjct: 1  MPKLKSNKGAAKRFKKTANGFKRKQSHL-RHILTKKSTKRKRHLRGTEMVAKCDVASVKR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 -MLP 62


>gi|41407451|ref|NP_960287.1| 50S ribosomal protein L35 [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|118466256|ref|YP_882310.1| 50S ribosomal protein L35 [Mycobacterium avium 104]
 gi|254775576|ref|ZP_05217092.1| 50S ribosomal protein L35 [Mycobacterium avium subsp. avium ATCC
          25291]
 gi|54036275|sp|Q740J7|RL35_MYCPA RecName: Full=50S ribosomal protein L35
 gi|166231197|sp|A0QHC2|RL35_MYCA1 RecName: Full=50S ribosomal protein L35
 gi|41395803|gb|AAS03670.1| RpmI [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167543|gb|ABK68440.1| ribosomal protein L35 [Mycobacterium avium 104]
          Length = 64

 Score = 41.2 bits (95), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q   +RH +  +     R   G   +++ D K+V  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKTNRRHLLEHKPTTRTRRLEGRTTVSANDTKRV-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NSLLNG 64


>gi|332525936|ref|ZP_08402077.1| 50S ribosomal protein L35 [Rubrivivax benzoatilyticus JA2]
 gi|332109487|gb|EGJ10410.1| 50S ribosomal protein L35 [Rubrivivax benzoatilyticus JA2]
          Length = 67

 Score = 41.2 bits (95), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT SS+KKRF +   G V+   A KRH + K+S    R+ RG   +   D
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKSTTRKRHLRGAANVHETD 54


>gi|332300495|ref|YP_004442416.1| 50S ribosomal protein L35 [Porphyromonas asaccharolytica DSM
          20707]
 gi|332177558|gb|AEE13248.1| 50S ribosomal protein L35 [Porphyromonas asaccharolytica DSM
          20707]
          Length = 64

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT S +KKRF +T +G+V+ + A K H + K+S K  RN   T ++   + K V
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRVKRKHAYKSHILTKKSKKRKRNLTYTALVHPHNEKSV 58


>gi|297182830|gb|ADI18982.1| hypothetical protein [uncultured delta proteobacterium
          HF0010_10I05]
          Length = 70

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKT+    KRF +T +GK + + A  RHGM KRSN   R+ R    +  +D + V+
Sbjct: 5  KMKTHKGGAKRFKMTGSGKFKRKKAYLRHGMRKRSNDAKRSLRQKGYVEGSDHQAVV 61


>gi|121535638|ref|ZP_01667444.1| ribosomal protein L35 [Thermosinus carboxydivorans Nor1]
 gi|121305808|gb|EAX46744.1| ribosomal protein L35 [Thermosinus carboxydivorans Nor1]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF +T +G+ +   A K H + K+S    RN R   +++ AD ++V R
Sbjct: 1  MPKIKTRKSAAKRFKVTGSGEFKRAKAFKSHILEKKSPARKRNLRKAALVSKADYERVAR 60


>gi|18310875|ref|NP_562809.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
 gi|110801128|ref|YP_696573.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
 gi|110803127|ref|YP_699171.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
 gi|168206056|ref|ZP_02632061.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
 gi|168215519|ref|ZP_02641144.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
 gi|169343773|ref|ZP_02864772.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
 gi|182626131|ref|ZP_02953891.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
 gi|20139453|sp|Q8XJ68|RL35_CLOPE RecName: Full=50S ribosomal protein L35
 gi|118573002|sp|Q0TP67|RL35_CLOP1 RecName: Full=50S ribosomal protein L35
 gi|118573003|sp|Q0SRT6|RL35_CLOPS RecName: Full=50S ribosomal protein L35
 gi|18145557|dbj|BAB81599.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
 gi|110675775|gb|ABG84762.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
 gi|110683628|gb|ABG86998.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
 gi|169298333|gb|EDS80423.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
 gi|170662412|gb|EDT15095.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
 gi|177908568|gb|EDT71093.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
 gi|182382218|gb|EDT79697.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H + K+S K  RN R T  +++A  +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAHAFTSHILTKKSAKRKRNLRKTGYVSTAQ-EKAMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|15605569|ref|NP_220355.1| 50S ribosomal protein L35 [Chlamydia trachomatis D/UW-3/CX]
 gi|15834842|ref|NP_296601.1| 50S ribosomal protein L35 [Chlamydia muridarum Nigg]
 gi|76789579|ref|YP_328665.1| 50S ribosomal protein L35 [Chlamydia trachomatis A/HAR-13]
 gi|255311675|ref|ZP_05354245.1| 50S ribosomal protein L35 [Chlamydia trachomatis 6276]
 gi|255317976|ref|ZP_05359222.1| 50S ribosomal protein L35 [Chlamydia trachomatis 6276s]
 gi|255349239|ref|ZP_05381246.1| 50S ribosomal protein L35 [Chlamydia trachomatis 70]
 gi|255503776|ref|ZP_05382166.1| 50S ribosomal protein L35 [Chlamydia trachomatis 70s]
 gi|255507457|ref|ZP_05383096.1| 50S ribosomal protein L35 [Chlamydia trachomatis D(s)2923]
 gi|301335423|ref|ZP_07223667.1| 50S ribosomal protein L35 [Chlamydia trachomatis L2tet1]
 gi|301336405|ref|ZP_07224607.1| 50S ribosomal protein L35 [Chlamydia muridarum MopnTet14]
 gi|54039202|sp|P66268|RL35_CHLMU RecName: Full=50S ribosomal protein L35
 gi|54041899|sp|P66267|RL35_CHLTR RecName: Full=50S ribosomal protein L35
 gi|148840415|sp|Q3KKK5|RL35_CHLTA RecName: Full=50S ribosomal protein L35
 gi|3329305|gb|AAC68431.1| L35 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|7190261|gb|AAF39094.1| ribosomal protein L35 [Chlamydia muridarum Nigg]
 gi|76168109|gb|AAX51117.1| LSU ribosomal protein L35P [Chlamydia trachomatis A/HAR-13]
 gi|296435466|gb|ADH17644.1| 50S ribosomal protein L35 [Chlamydia trachomatis E/150]
 gi|296437321|gb|ADH19491.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/11222]
 gi|296439183|gb|ADH21336.1| 50S ribosomal protein L35 [Chlamydia trachomatis E/11023]
          Length = 64

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMK+N S   RF +T +G+++    GKRH + KRS++  RN
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRN 43


>gi|163788632|ref|ZP_02183077.1| 50S ribosomal protein L35 [Flavobacteriales bacterium ALC-1]
 gi|159875869|gb|EDP69928.1| 50S ribosomal protein L35 [Flavobacteriales bacterium ALC-1]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT SS+KKRF +T TGK++ + A K H
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSH 31


>gi|294340012|emb|CAZ88376.1| 50S ribosomal subunit protein L35 [Thiomonas sp. 3As]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D K++
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATGVHDSDLKQI 58


>gi|319954101|ref|YP_004165368.1| lsu ribosomal protein l35p [Cellulophaga algicola DSM 14237]
 gi|319422761|gb|ADV49870.1| LSU ribosomal protein L35P [Cellulophaga algicola DSM 14237]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPK KT SS+KKRF +T +GK++ + A K H + K+S K
Sbjct: 1  MPKQKTKSSAKKRFKLTGSGKIKRKHAFKSHILTKKSKK 39


>gi|227488134|ref|ZP_03918450.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227541531|ref|ZP_03971580.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51866]
 gi|227091996|gb|EEI27308.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227182687|gb|EEI63659.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51866]
          Length = 64

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+    KR  I+  GK+R + AG+RH +  + +K  R  +GT+ +A AD K+V R
Sbjct: 2  KQKTHKGMAKRVKISGKGKLRRERAGRRHLLESKPSKRTRRLKGTVDVAPADVKRVKR 59


>gi|92113924|ref|YP_573852.1| 50S ribosomal protein L35 [Chromohalobacter salexigens DSM 3043]
 gi|148840416|sp|Q1QWK5|RL35_CHRSD RecName: Full=50S ribosomal protein L35
 gi|91797014|gb|ABE59153.1| LSU ribosomal protein L35P [Chromohalobacter salexigens DSM 3043]
          Length = 64

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R  RG   +  AD K++I+
Sbjct: 1  MPKIKSNSGAAKRFKKTAHG-FKHKQSFRSHILTKKSTKRKRQLRGMKQIHDAD-KQLIQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|189424930|ref|YP_001952107.1| ribosomal protein L35 [Geobacter lovleyi SZ]
 gi|226725016|sp|B3E1T7|RL35_GEOLS RecName: Full=50S ribosomal protein L35
 gi|189421189|gb|ACD95587.1| ribosomal protein L35 [Geobacter lovleyi SZ]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTN  + KRF  T TGKV+   A   H +  +++K  RN R +  +A+ D K + 
Sbjct: 1  MPKIKTNRGAAKRFKKTGTGKVKRAHAFTSHILTHKTSKRKRNLRQSNTVAAVDQKNIC 59


>gi|167040676|ref|YP_001663661.1| 50S ribosomal protein L35 [Thermoanaerobacter sp. X514]
 gi|256751283|ref|ZP_05492163.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289578711|ref|YP_003477338.1| ribosomal protein L35 [Thermoanaerobacter italicus Ab9]
 gi|297544945|ref|YP_003677247.1| 50S ribosomal protein L35 [Thermoanaerobacter mathranii subsp.
          mathranii str. A3]
 gi|300914717|ref|ZP_07132033.1| ribosomal protein L35 [Thermoanaerobacter sp. X561]
 gi|307724049|ref|YP_003903800.1| 50S ribosomal protein L35 [Thermoanaerobacter sp. X513]
 gi|226725077|sp|B0K3V4|RL35_THEPX RecName: Full=50S ribosomal protein L35
 gi|166854916|gb|ABY93325.1| ribosomal protein L35 [Thermoanaerobacter sp. X514]
 gi|256749838|gb|EEU62862.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289528424|gb|ADD02776.1| ribosomal protein L35 [Thermoanaerobacter italicus Ab9]
 gi|296842720|gb|ADH61236.1| ribosomal protein L35 [Thermoanaerobacter mathranii subsp.
          mathranii str. A3]
 gi|300889652|gb|EFK84798.1| ribosomal protein L35 [Thermoanaerobacter sp. X561]
 gi|307581110|gb|ADN54509.1| ribosomal protein L35 [Thermoanaerobacter sp. X513]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L   DAK  IR
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSKAYKSHLLTHKNAKRKRRLRKATYLVGGDAKN-IR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|319651796|ref|ZP_08005921.1| 50S ribosomal protein L35 [Bacillus sp. 2_A_57_CT2]
 gi|317396448|gb|EFV77161.1| 50S ribosomal protein L35 [Bacillus sp. 2_A_57_CT2]
          Length = 66

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A + H    +S K  R  R   +++S D K+ IR
Sbjct: 1  MPKMKTHRGAAKRFKRTGSGKLKRSHAYRSHMFANKSQKQKRKLRKGTLVSSGDYKR-IR 59

Query: 61 NYLPN 65
          N L N
Sbjct: 60 NLLVN 64


>gi|319779412|ref|YP_004130325.1| LSU ribosomal protein L35p [Taylorella equigenitalis MCE9]
 gi|317109436|gb|ADU92182.1| LSU ribosomal protein L35p [Taylorella equigenitalis MCE9]
          Length = 81

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 17 MPKMKTKKSASKRFIVRGSGSIKRGQAFKRHILTKKTTKNKRHLRGATQVHESDVASV-R 75

Query: 61 NYLP 64
            +P
Sbjct: 76 AMMP 79


>gi|260062394|ref|YP_003195474.1| 50S ribosomal protein L35 [Robiginitalea biformata HTCC2501]
 gi|88783957|gb|EAR15128.1| ribosomal protein L35 [Robiginitalea biformata HTCC2501]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT SS+KKRF +T TGK++ + A K H
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSH 31


>gi|229496100|ref|ZP_04389822.1| ribosomal protein L35 [Porphyromonas endodontalis ATCC 35406]
 gi|229316996|gb|EEN82907.1| ribosomal protein L35 [Porphyromonas endodontalis ATCC 35406]
          Length = 82

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPK KT S +KKRF+IT +GK++ + A K H + K+S K  RN
Sbjct: 18 MPKQKTVSGAKKRFAITGSGKIKRKHAFKSHILTKKSKKRKRN 60


>gi|33519813|ref|NP_878645.1| 50S ribosomal protein L35 [Candidatus Blochmannia floridanus]
 gi|54036294|sp|Q7VR69|RL35_BLOFL RecName: Full=50S ribosomal protein L35
 gi|33504158|emb|CAD83420.1| 50S ribosomal subunit protein L35 [Candidatus Blochmannia
          floridanus]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ S+ KRF   ++ K + + A  RH + K+S K  R+ R   +L+  + +K+++
Sbjct: 1  MPKIKTSRSASKRFKRLSSNKYKFKHAYARHILTKKSTKHKRHLRIKSILSKKNNRKIMK 60

Query: 61 NYLP 64
           YLP
Sbjct: 61 -YLP 63


>gi|329944514|ref|ZP_08292679.1| ribosomal protein L35 [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530279|gb|EGF57158.1| ribosomal protein L35 [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 64

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKRF +T +GK+  +   KRH +  +S++  R       +A AD ++V
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQTNKRHLLEVKSSRRKRKLSQDQPVAPADVRQV 58


>gi|302389960|ref|YP_003825781.1| LSU ribosomal protein L35P [Thermosediminibacter oceani DSM
          16646]
 gi|302200588|gb|ADL08158.1| LSU ribosomal protein L35P [Thermosediminibacter oceani DSM
          16646]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+  + KRF +T  GK++   A K H +  +S K  R+ R    ++ AD K++
Sbjct: 1  MPKIKTHRGAAKRFDLTKKGKIKRAKANKSHLLAHKSQKRKRHLRKPAFVSKADYKRI 58


>gi|167037185|ref|YP_001664763.1| 50S ribosomal protein L35 [Thermoanaerobacter pseudethanolicus
          ATCC 33223]
 gi|307267646|ref|ZP_07549108.1| ribosomal protein L35 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|320115603|ref|YP_004185762.1| 50S ribosomal protein L35 [Thermoanaerobacter brockii subsp.
          finnii Ako-1]
 gi|226725076|sp|B0K8B4|RL35_THEP3 RecName: Full=50S ribosomal protein L35
 gi|166856019|gb|ABY94427.1| ribosomal protein L35 [Thermoanaerobacter pseudethanolicus ATCC
          33223]
 gi|306917335|gb|EFN47647.1| ribosomal protein L35 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|319928694|gb|ADV79379.1| ribosomal protein L35 [Thermoanaerobacter brockii subsp. finnii
          Ako-1]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L  ADAK  I+
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSRAYKSHLLTHKNAKRKRRLRKATYLVGADAKN-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|295109211|emb|CBL23164.1| LSU ribosomal protein L35P [Ruminococcus obeum A2-162]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R   V+ S + K  I+
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKIMRNKAYKSHILTKKSQKRKRNLRKATVVDSTNLKN-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KALP 63


>gi|237808484|ref|YP_002892924.1| 50S ribosomal protein L35 [Tolumonas auensis DSM 9187]
 gi|259647364|sp|C4LFH1|RL35_TOLAT RecName: Full=50S ribosomal protein L35
 gi|237500745|gb|ACQ93338.1| ribosomal protein L35 [Tolumonas auensis DSM 9187]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T +G  + + A KRH + K++ K  R+ R   ++A  D  +V
Sbjct: 1  MPKMKTDRGAAKRFKKTGSGGFKCKHANKRHILTKKTTKRKRHLRAPGMVAKPDLARV 58


>gi|320108480|ref|YP_004184070.1| 50S ribosomal protein L35 [Terriglobus saanensis SP1PR4]
 gi|319927001|gb|ADV84076.1| ribosomal protein L35 [Terriglobus saanensis SP1PR4]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF  T TGK++   A  RH +  +  K  R    +  ++ AD  KV R
Sbjct: 1  MPKMKTHSGAAKRFRKTGTGKIKRGQAKMRHILTSKDTKTKRKLGASAFVSDADYHKVSR 60


>gi|291523568|emb|CBK81861.1| LSU ribosomal protein L35P [Coprococcus catus GD/7]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TG+++   A K H + K+S K  RN R   +  S +A KV++
Sbjct: 1  MPKVKTSRAAAKRFKKTGTGQLKRMKAYKSHILTKKSAKRKRNLRHAAMTDSTNA-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|159486445|ref|XP_001701250.1| plastid ribosomal protein L35 [Chlamydomonas reinhardtii]
 gi|158271832|gb|EDO97643.1| plastid ribosomal protein L35 [Chlamydomonas reinhardtii]
          Length = 114

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT  S+ KRF +T +GKV A+ AGK+H   K +   IR++    VL+ A+     +  
Sbjct: 47  KLKTRKSAAKRFKVTGSGKVTARHAGKQHFNEKMTRDHIRDSSKMFVLSPANIYNATK-C 105

Query: 63  LPN 65
           LPN
Sbjct: 106 LPN 108


>gi|85711634|ref|ZP_01042691.1| Ribosomal protein L35 [Idiomarina baltica OS145]
 gi|85694494|gb|EAQ32435.1| Ribosomal protein L35 [Idiomarina baltica OS145]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA+G  + + +  RH + K++ K  R  R   ++  AD K V R
Sbjct: 1  MPKMKSNKGASKRFKKTASGGYKCKQSHLRHILTKKTPKRKRQLRAKSMVHEADVKLVDR 60


>gi|188589898|ref|YP_001921629.1| 50S ribosomal protein L35 [Clostridium botulinum E3 str. Alaska
          E43]
 gi|251780306|ref|ZP_04823226.1| 50S ribosomal protein L35 [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
 gi|226724983|sp|B2V5A0|RL35_CLOBA RecName: Full=50S ribosomal protein L35
 gi|188500179|gb|ACD53315.1| 50S ribosomal protein L35 [Clostridium botulinum E3 str. Alaska
          E43]
 gi|243084621|gb|EES50511.1| 50S ribosomal protein L35 [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
          Length = 65

 Score = 40.4 bits (93), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPKMK++  + KRF  T TGK++   A K H + K+S K  RN R G  V  S   +KV+
Sbjct: 1  MPKMKSHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSPKTKRNLRKGGYV--SKSEEKVM 58

Query: 60 RNYLP 64
          +  LP
Sbjct: 59 KKLLP 63


>gi|227833183|ref|YP_002834890.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
 gi|262184169|ref|ZP_06043590.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
 gi|254802445|sp|C3PGJ8|RL35_CORA7 RecName: Full=50S ribosomal protein L35
 gi|227454199|gb|ACP32952.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +K  R  +GT  +A AD K+V R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAKADTKRVKR 59


>gi|218779646|ref|YP_002430964.1| 50S ribosomal protein L35 [Desulfatibacillum alkenivorans AK-01]
 gi|226724994|sp|B8FFU1|RL35_DESAA RecName: Full=50S ribosomal protein L35
 gi|218761030|gb|ACL03496.1| ribosomal protein L35 [Desulfatibacillum alkenivorans AK-01]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T +GKV+   +   H + K+S K  R+ R + +L  A+ K + R
Sbjct: 1  MPKIKTNRAAAKRFKKTGSGKVKYSKSFGSHILAKKSRKRKRDLRQSHILDEANMKNIKR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -LLP 63


>gi|260589750|ref|ZP_05855663.1| ribosomal protein L35 [Blautia hansenii DSM 20583]
 gi|331083181|ref|ZP_08332297.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539990|gb|EEX20559.1| ribosomal protein L35 [Blautia hansenii DSM 20583]
 gi|330404570|gb|EGG84110.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT  ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K
Sbjct: 1  MPKMKTTKAAAKRFKSTGTGKLKRNKAYKSHILTKKSQKRKRNLRKAAITDATNVK 56


>gi|270284018|ref|ZP_05965423.2| ribosomal protein L35 [Bifidobacterium gallicum DSM 20093]
 gi|270277945|gb|EFA23799.1| ribosomal protein L35 [Bifidobacterium gallicum DSM 20093]
          Length = 80

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS+++KR  +T +GKV    +  RH +  +S +  R  +    L++  AKK+
Sbjct: 17 MPKMKTNSAARKRVRVTGSGKVVHNGSAMRHNLEHKSARKRRALKANKTLSTPQAKKM 74


>gi|91787977|ref|YP_548929.1| 50S ribosomal protein L35 [Polaromonas sp. JS666]
 gi|118573017|sp|Q12BR1|RL35_POLSJ RecName: Full=50S ribosomal protein L35
 gi|91697202|gb|ABE44031.1| LSU ribosomal protein L35P [Polaromonas sp. JS666]
          Length = 67

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R+ RG + +   +
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVTVHETN 54


>gi|121605745|ref|YP_983074.1| 50S ribosomal protein L35 [Polaromonas naphthalenivorans CJ2]
 gi|166199815|sp|A1VR75|RL35_POLNA RecName: Full=50S ribosomal protein L35
 gi|120594714|gb|ABM38153.1| LSU ribosomal protein L35P [Polaromonas naphthalenivorans CJ2]
          Length = 67

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R  RG++ +   +
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSVAVHETN 54


>gi|330503837|ref|YP_004380706.1| 50S ribosomal protein L35 [Pseudomonas mendocina NK-01]
 gi|328918123|gb|AEB58954.1| 50S ribosomal protein L35 [Pseudomonas mendocina NK-01]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + A K H + K S K  R  RG+ ++  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTATG-FKHKHAFKSHILTKMSTKRKRQLRGSSLIGPSDKAKVER 59


>gi|127512958|ref|YP_001094155.1| 50S ribosomal protein L35 [Shewanella loihica PV-4]
 gi|166199835|sp|A3QEJ8|RL35_SHELP RecName: Full=50S ribosomal protein L35
 gi|126638253|gb|ABO23896.1| LSU ribosomal protein L35P [Shewanella loihica PV-4]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+   +KRF  TA G  R QA   RH + K+S K  R+ R   ++A +D   + R
Sbjct: 1  MPKMKTDKGVQKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|193216576|ref|YP_001999818.1| 50S ribosomal protein L35 [Mycoplasma arthritidis 158L3-1]
 gi|226725035|sp|B3PM62|RL35_MYCA5 RecName: Full=50S ribosomal protein L35
 gi|193001899|gb|ACF07114.1| ribosomal protein L35 [Mycoplasma arthritidis 158L3-1]
          Length = 62

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S  KKR  ITATGKV+   A + H    ++ K  R +R +  L+ +D K+
Sbjct: 1  MPKMKTKSGLKKRIKITATGKVKRGNAYRSHLAQNKTTKQKRQSRKSSQLSHSDFKR 57


>gi|253795697|ref|YP_003038793.1| putative 50S ribosomal subunit protein L35 [Candidatus Hodgkinia
          cicadicola Dsem]
 gi|253740005|gb|ACT34340.1| putative 50S ribosomal subunit protein L35 [Candidatus Hodgkinia
          cicadicola Dsem]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          + K+KT S +KKRF   A G V+A  A +RH +  R  K  R  R + V++ AD +K+ R
Sbjct: 2  LAKLKTRSGAKKRFRRLAGGGVKAWCACRRHKLYNR-RKTARQQRRSFVISLADVRKIKR 60

Query: 61 NYLP 64
             P
Sbjct: 61 VIKP 64


>gi|164687659|ref|ZP_02211687.1| hypothetical protein CLOBAR_01301 [Clostridium bartlettii DSM
          16795]
 gi|164603433|gb|EDQ96898.1| hypothetical protein CLOBAR_01301 [Clostridium bartlettii DSM
          16795]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++
Sbjct: 1  MPKMKTHRGAAKRLRKTGSGKLKRNKAYKSHILTKKSPKTKMNLRKSAIVSDGDAKRI 58


>gi|261250895|ref|ZP_05943469.1| LSU ribosomal protein L35p [Vibrio orientalis CIP 102891]
 gi|323493465|ref|ZP_08098587.1| 50S ribosomal protein L35 [Vibrio brasiliensis LMG 20546]
 gi|260937768|gb|EEX93756.1| LSU ribosomal protein L35p [Vibrio orientalis CIP 102891]
 gi|323312288|gb|EGA65430.1| 50S ribosomal protein L35 [Vibrio brasiliensis LMG 20546]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59


>gi|328955210|ref|YP_004372543.1| LSU ribosomal protein L35P [Coriobacterium glomerans PW2]
 gi|328455534|gb|AEB06728.1| LSU ribosomal protein L35P [Coriobacterium glomerans PW2]
          Length = 63

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF +T TGK+    A K H   K+S    R  R    ++ AD +KVI+
Sbjct: 1  MPKMKSHSGTKKRFRLTGTGKIMRAKAFKSHLTGKKSQNRKRGYRQETEVSPAD-RKVIK 59

Query: 61 NYL 63
            L
Sbjct: 60 ARL 62


>gi|114319927|ref|YP_741610.1| 50S ribosomal protein L35 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312210|sp|Q0AAL7|RL35_ALHEH RecName: Full=50S ribosomal protein L35
 gi|114226321|gb|ABI56120.1| LSU ribosomal protein L35P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G+ +   A   H + K+ +K  R  R   ++A AD   +IR
Sbjct: 1  MPKIKTNRGAAKRFKATASGRYKRAHAFHNHILTKKDSKRKRKLRADALVAEADT-PMIR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 RMMP 63


>gi|147678289|ref|YP_001212504.1| 50S ribosomal protein L35 [Pelotomaculum thermopropionicum SI]
 gi|189042777|sp|A5D0U5|RL35_PELTS RecName: Full=50S ribosomal protein L35
 gi|146274386|dbj|BAF60135.1| ribosomal protein L35 [Pelotomaculum thermopropionicum SI]
          Length = 63

 Score = 40.4 bits (93), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TA GK +   A   H + K++ K  RN R   V++ ADA+++ R
Sbjct: 1  MPKIKTHRGAAKRFKQTAGGKWKGSHAFHSHILGKKTAKRKRNLRKVTVISMADARRLKR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -LLP 63


>gi|289668711|ref|ZP_06489786.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. musacearum
          NCPPB4381]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQPNHVRAEDAGRLDR 60


>gi|312795974|ref|YP_004028896.1| LSU ribosomal protein L35P [Burkholderia rhizoxinica HKI 454]
 gi|312167749|emb|CBW74752.1| LSU ribosomal protein L35P [Burkholderia rhizoxinica HKI 454]
          Length = 68

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R  RG+  + ++D   V R
Sbjct: 4  MPKMKTKKSASKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTDVHASDVNSV-R 62

Query: 61 NYLP 64
            +P
Sbjct: 63 AMMP 66


>gi|297562011|ref|YP_003680985.1| ribosomal protein L35 [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296846459|gb|ADH68479.1| ribosomal protein L35 [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+S +K RF +T +GK+  + A K H +  +++K  R      VL+ ADAK
Sbjct: 1  MPKNKTHSGAKDRFKVTGSGKIMRRRANKNHILEHKTSKRKRKLGNEAVLSPADAK 56


>gi|187932485|ref|YP_001886667.1| 50S ribosomal protein L35 [Clostridium botulinum B str. Eklund
          17B]
 gi|226724984|sp|B2TS60|RL35_CLOBB RecName: Full=50S ribosomal protein L35
 gi|187720638|gb|ACD21859.1| 50S ribosomal protein L35 [Clostridium botulinum B str. Eklund
          17B]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPKMK++  + KRF  T TGK++   A K H + K+S K  RN R G  V  S +  KV+
Sbjct: 1  MPKMKSHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSPKTKRNLRKGGYVSKSQE--KVM 58

Query: 60 RNYLP 64
          +  LP
Sbjct: 59 KKLLP 63


>gi|38233751|ref|NP_939518.1| 50S ribosomal protein L35 [Corynebacterium diphtheriae NCTC
          13129]
 gi|54036266|sp|Q6NHH6|RL35_CORDI RecName: Full=50S ribosomal protein L35
 gi|38200012|emb|CAE49681.1| 50S ribosomal protein L35 [Corynebacterium diphtheriae]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  IT +GK+R + A +RH +  + +K  R  +GT  +A AD K++ R
Sbjct: 2  KQKTHKGTAKRVKITGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAKADTKRIKR 59


>gi|225076638|ref|ZP_03719837.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
          NRL30031/H210]
 gi|241758573|ref|ZP_04756688.1| ribosomal protein L35 [Neisseria flavescens SK114]
 gi|261377870|ref|ZP_05982443.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
 gi|261379893|ref|ZP_05984466.1| ribosomal protein L35 [Neisseria subflava NJ9703]
 gi|261400403|ref|ZP_05986528.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
 gi|313668800|ref|YP_004049084.1| 50S ribosomal protein L35 [Neisseria lactamica ST-640]
 gi|319637849|ref|ZP_07992615.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
 gi|224952044|gb|EEG33253.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
          NRL30031/H210]
 gi|241321225|gb|EER57397.1| ribosomal protein L35 [Neisseria flavescens SK114]
 gi|269145720|gb|EEZ72138.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
 gi|269209846|gb|EEZ76301.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
 gi|284797594|gb|EFC52941.1| ribosomal protein L35 [Neisseria subflava NJ9703]
 gi|309378777|emb|CBX22603.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313006262|emb|CBN87724.1| 50S ribosomal protein L35 [Neisseria lactamica 020-06]
 gi|317401004|gb|EFV81659.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A K H + K++ K  R  RGT ++ S D   V
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMVDSRDLASV 58


>gi|326391474|ref|ZP_08213009.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus JW 200]
 gi|325992500|gb|EGD50957.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus JW 200]
          Length = 65

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L  ADAK  I+
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSRAYKSHLLTHKNAKRKRRLRKATYLIGADAKN-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|294155484|ref|YP_003559868.1| 50S ribosomal protein L35 [Mycoplasma crocodyli MP145]
 gi|291600508|gb|ADE20004.1| 50S ribosomal protein L35 [Mycoplasma crocodyli MP145]
          Length = 62

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S+ KKR  IT TGKV  + A + H    ++ K  R +R ++ ++ +D K+
Sbjct: 1  MPKMKTKSALKKRIKITGTGKVMREQAFRSHLAQNKTTKQKRQSRKSVQMSKSDIKR 57


>gi|323499331|ref|ZP_08104308.1| 50S ribosomal protein L35 [Vibrio sinaloensis DSM 21326]
 gi|323315719|gb|EGA68753.1| 50S ribosomal protein L35 [Vibrio sinaloensis DSM 21326]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59


>gi|313887204|ref|ZP_07820900.1| ribosomal protein L35 [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923433|gb|EFR34246.1| ribosomal protein L35 [Porphyromonas asaccharolytica PR426713P-I]
          Length = 64

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT S +KKRF +T +G+++ + A K H + K+S K  RN   T ++   + K V
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRIKRKHAYKSHILTKKSKKRKRNLTYTALVDPHNEKSV 58


>gi|168188010|ref|ZP_02622645.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
 gi|169294167|gb|EDS76300.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
          Length = 59

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  K
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQEK 56


>gi|229829198|ref|ZP_04455267.1| hypothetical protein GCWU000342_01285 [Shuttleworthia satelles
          DSM 14600]
 gi|229792361|gb|EEP28475.1| hypothetical protein GCWU000342_01285 [Shuttleworthia satelles
          DSM 14600]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF+ T +GK++   A K H + K++ K  RN R + +  +++  K ++
Sbjct: 1  MPKMKTKRAAAKRFTATGSGKLKRNKAFKSHILTKKTTKRKRNLRQSAITDASNV-KSLK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|289422393|ref|ZP_06424239.1| ribosomal protein L35 [Peptostreptococcus anaerobius 653-L]
 gi|289157228|gb|EFD05847.1| ribosomal protein L35 [Peptostreptococcus anaerobius 653-L]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++
Sbjct: 1  MPKMKTHRGAAKRLKKTGSGKLKRAKAYKSHILTKKSPKTKMNLRQSTLVSDGDAKRI 58


>gi|289548237|ref|YP_003473225.1| ribosomal protein L35 [Thermocrinis albus DSM 14484]
 gi|289181854|gb|ADC89098.1| ribosomal protein L35 [Thermocrinis albus DSM 14484]
          Length = 67

 Score = 40.0 bits (92), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAK 56
          KMKTN S+KKRF +TATGK++   AG  H   K+S    R  R  T+V  S + K
Sbjct: 5  KMKTNRSAKKRFKVTATGKIKRWKAGGSHYNTKKSKDRKRRLRKATLVNPSWEDK 59


>gi|124267075|ref|YP_001021079.1| 50S ribosomal protein L35P [Methylibium petroleiphilum PM1]
 gi|166231196|sp|A2SH05|RL35_METPP RecName: Full=50S ribosomal protein L35
 gi|124259850|gb|ABM94844.1| LSU ribosomal protein L35P [Methylibium petroleiphilum PM1]
          Length = 67

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT  S+ KRF +   G V+   A KRH + K+S K  R+ RGT  +   +
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKSTKNKRHLRGTATVHETN 54


>gi|307244262|ref|ZP_07526377.1| ribosomal protein L35 [Peptostreptococcus stomatis DSM 17678]
 gi|306492412|gb|EFM64450.1| ribosomal protein L35 [Peptostreptococcus stomatis DSM 17678]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++
Sbjct: 1  MPKMKTHRGAAKRLKRTGSGKLKRAKAYKSHILTKKSPKTKMNLRQSTLVSDGDAKRI 58


>gi|288940717|ref|YP_003442957.1| 50S ribosomal protein L35 [Allochromatium vinosum DSM 180]
 gi|288896089|gb|ADC61925.1| ribosomal protein L35 [Allochromatium vinosum DSM 180]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KTN  + KRF  T +G V+  A+ +RH + K+S K  R  R    +  +D
Sbjct: 1  MPKIKTNRGAAKRFKRTPSGGVKCNASHRRHILTKKSTKRKRQLRAPQRVHQSD 54


>gi|325982723|ref|YP_004295125.1| 50S ribosomal protein L35 [Nitrosomonas sp. AL212]
 gi|325532242|gb|ADZ26963.1| 50S ribosomal protein L35 [Nitrosomonas sp. AL212]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF   A+G ++   A KRH + K++ K  R  RG   +   + +  IR
Sbjct: 1  MPKMKTKSGAAKRFKFRASGSIKRSQAFKRHILTKKTTKNKRQLRGIAEVHFTN-ENAIR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 TMMP 63


>gi|260219596|emb|CBA26441.1| 50S ribosomal protein L35 [Curvibacter putative symbiont of Hydra
          magnipapillata]
          Length = 94

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R+ RG+  +   +
Sbjct: 28 MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSAAVHETN 81


>gi|330719622|gb|EGG98192.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC2047]
          Length = 64

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R  RG   + +AD K +++
Sbjct: 1  MPKIKSNSGAAKRFKKTANG-FKHKQSFRSHILTKKSTKRKRQLRGMQQIHAAD-KALVQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
 gi|310287137|ref|YP_003938395.1| rpmI LSU ribosomal protein L35P [Bifidobacterium bifidum S17]
 gi|311064000|ref|YP_003970725.1| 50S ribosomal protein L35P RpmI [Bifidobacterium bifidum PRL2010]
 gi|313139836|ref|ZP_07802029.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251073|gb|ADO52821.1| rpmI LSU ribosomal protein L35P [Bifidobacterium bifidum S17]
 gi|310866319|gb|ADP35688.1| RpmI LSU ribosomal protein L35P [Bifidobacterium bifidum PRL2010]
 gi|313132346|gb|EFR49963.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
          Length = 64

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA+A +K
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATAQSK 56


>gi|332529093|ref|ZP_08405057.1| 50S ribosomal protein L35 [Hylemonella gracilis ATCC 19624]
 gi|332041316|gb|EGI77678.1| 50S ribosomal protein L35 [Hylemonella gracilis ATCC 19624]
          Length = 67

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 30/46 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R+ RG
Sbjct: 1  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRG 46


>gi|312195568|ref|YP_004015629.1| ribosomal protein L35 [Frankia sp. EuI1c]
 gi|311226904|gb|ADP79759.1| ribosomal protein L35 [Frankia sp. EuI1c]
          Length = 64

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK +S + KRF +T +GK+  + A + H +  ++++  R     + LA AD +++ R
Sbjct: 1  MPKMKPHSGASKRFRVTGSGKIMRRRANRAHLLEHKTSRRTRRLNNEVALAPADNRRISR 60


>gi|254447204|ref|ZP_05060671.1| ribosomal protein L35 [gamma proteobacterium HTCC5015]
 gi|198263343|gb|EDY87621.1| ribosomal protein L35 [gamma proteobacterium HTCC5015]
          Length = 66

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTM 48
          MPKMKTN  + KRF +T  G+V+   + +RH + K+S K  R+ R  +
Sbjct: 1  MPKMKTNRGAAKRFRVTGKGQVKRAQSHRRHILTKKSTKRKRHLRSDI 48


>gi|34496805|ref|NP_901020.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
 gi|54036286|sp|Q7NYC4|RL35_CHRVO RecName: Full=50S ribosomal protein L35
 gi|34102660|gb|AAQ59025.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKR  +   G  +   A KRH + K++ K  R  RGT ++ + +   V R
Sbjct: 1  MPKMKTKSSAKKRLKVLGGGGFKRAHAFKRHILTKKTTKNKRQLRGTSMVDATNVASV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|227501817|ref|ZP_03931866.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49725]
 gi|306835995|ref|ZP_07468987.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49726]
 gi|227077842|gb|EEI15805.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49725]
 gi|304568161|gb|EFM43734.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49726]
          Length = 64

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +K  R  +GT  ++ AD K+V R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSKRTRRLKGTESVSQADTKRVKR 59


>gi|39996617|ref|NP_952568.1| 50S ribosomal protein L35 [Geobacter sulfurreducens PCA]
 gi|54036276|sp|Q74D02|RL35_GEOSL RecName: Full=50S ribosomal protein L35
 gi|39983498|gb|AAR34891.1| ribosomal protein L35 [Geobacter sulfurreducens PCA]
 gi|298505630|gb|ADI84353.1| ribosomal protein L35 [Geobacter sulfurreducens KN400]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF  T TGK++   A   H +  ++ K  R  R + V+A+ D K +
Sbjct: 1  MPKIKTNRGAAKRFKKTGTGKIKRSHAFTSHILTSKTRKRKRQLRSSAVVAAVDHKNI 58


>gi|332295139|ref|YP_004437062.1| 50S ribosomal protein L35 [Thermodesulfobium narugense DSM 14796]
 gi|332178242|gb|AEE13931.1| 50S ribosomal protein L35 [Thermodesulfobium narugense DSM 14796]
          Length = 68

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T +GK+  +   + H +  +S K  R    T+V++S+D  +++ 
Sbjct: 1  MPKMKTCRAAAKRFRVTGSGKIIRRQQNRSHLLFHKSPKRKRRLAKTLVVSSSDLPRLM- 59

Query: 61 NYLP 64
          + LP
Sbjct: 60 SQLP 63


>gi|117923680|ref|YP_864297.1| 50S ribosomal protein L35P [Magnetococcus sp. MC-1]
 gi|166231194|sp|A0L4J8|RL35_MAGSM RecName: Full=50S ribosomal protein L35
 gi|117607436|gb|ABK42891.1| LSU ribosomal protein L35P [Magnetococcus sp. MC-1]
          Length = 65

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GK+R   A K H + K+S K  R  R   ++   D   V R
Sbjct: 1  MPKLKTHRGAAKRFKVTGSGKIRRNKAFKSHILTKKSAKRKRGFRAGDLVHERDVAGV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KMLP 63


>gi|261368268|ref|ZP_05981151.1| ribosomal protein L35 [Subdoligranulum variabile DSM 15176]
 gi|282569783|gb|EFB75318.1| ribosomal protein L35 [Subdoligranulum variabile DSM 15176]
          Length = 68

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT S +KKRF +TA+GK++  A+ +RH + K++ K  R  R    +   + +  +R  
Sbjct: 5  KLKTLSGAKKRFKMTASGKIKRNASKRRHILTKKTTKLTRGLRMPKYVDKTN-EATVRKM 63

Query: 63 LPNG 66
          +P G
Sbjct: 64 MPYG 67


>gi|225568222|ref|ZP_03777247.1| hypothetical protein CLOHYLEM_04296 [Clostridium hylemonae DSM
          15053]
 gi|225162941|gb|EEG75560.1| hypothetical protein CLOHYLEM_04296 [Clostridium hylemonae DSM
          15053]
          Length = 65

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KTN ++ KRF  T TGK+    A K H + K+S K  RN R   V  + + K
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKPTVTDATNVK 56


>gi|110598678|ref|ZP_01386943.1| ribosomal protein L35 [Chlorobium ferrooxidans DSM 13031]
 gi|110339731|gb|EAT58241.1| ribosomal protein L35 [Chlorobium ferrooxidans DSM 13031]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L SA AK++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLDSAKAKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|297183198|gb|ADI19339.1| hypothetical protein [uncultured delta proteobacterium
          HF0500_03A04]
          Length = 62

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KRF +T +GKV+ + A  RHGM KRS    R  R    +   D   ++   L
Sbjct: 1  MKTHRGAAKRFRVTGSGKVKRKRAYLRHGMRKRSQDVKRALRKKTYVTVEDM-GLVERLL 59

Query: 64 PN 65
          PN
Sbjct: 60 PN 61


>gi|171742546|ref|ZP_02918353.1| hypothetical protein BIFDEN_01659 [Bifidobacterium dentium ATCC
          27678]
 gi|283456368|ref|YP_003360932.1| 50S ribosomal protein [Bifidobacterium dentium Bd1]
 gi|306822459|ref|ZP_07455837.1| 50S ribosomal protein L35 [Bifidobacterium dentium ATCC 27679]
 gi|309801432|ref|ZP_07695559.1| ribosomal protein L35 [Bifidobacterium dentium JCVIHMP022]
 gi|171278160|gb|EDT45821.1| hypothetical protein BIFDEN_01659 [Bifidobacterium dentium ATCC
          27678]
 gi|283103002|gb|ADB10108.1| rpmI LSU ribosomal protein [Bifidobacterium dentium Bd1]
 gi|304554004|gb|EFM41913.1| 50S ribosomal protein L35 [Bifidobacterium dentium ATCC 27679]
 gi|308221947|gb|EFO78232.1| ribosomal protein L35 [Bifidobacterium dentium JCVIHMP022]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLAS+  K
Sbjct: 1  MPKMKTNSAASKRIRVTGSGKLMHAGSAMRHNLEHKSARKRRELKADGVLASSQNK 56


>gi|119026093|ref|YP_909938.1| 50S ribosomal protein L35 [Bifidobacterium adolescentis ATCC
          15703]
 gi|154488866|ref|ZP_02029715.1| hypothetical protein BIFADO_02174 [Bifidobacterium adolescentis
          L2-32]
 gi|166231158|sp|A1A2C3|RL35_BIFAA RecName: Full=50S ribosomal protein L35
 gi|118765677|dbj|BAF39856.1| 50S ribosomal protein L35 [Bifidobacterium adolescentis ATCC
          15703]
 gi|154083003|gb|EDN82048.1| hypothetical protein BIFADO_02174 [Bifidobacterium adolescentis
          L2-32]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA++ +K
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRELKADGVLATSQSK 56


>gi|238922262|ref|YP_002935776.1| hypothetical protein EUBELI_20497 [Eubacterium eligens ATCC
          27750]
 gi|238873934|gb|ACR73642.1| Hypothetical protein EUBELI_20497 [Eubacterium eligens ATCC
          27750]
          Length = 65

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT  ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K  K 
Sbjct: 1  MPKVKTKRAAAKRFKVTGTGKLKRMKAYKSHILTKKSTKRKRNLRQAAMTDATNVKTMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 IMPYL 65


>gi|326331230|ref|ZP_08197524.1| ribosomal protein L35 [Nocardioidaceae bacterium Broad-1]
 gi|325951000|gb|EGD43046.1| ribosomal protein L35 [Nocardioidaceae bacterium Broad-1]
          Length = 70

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 8/65 (12%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRS-------NKFIRNARGTMVLASA 53
          MPK KT+S SKKRF +T +GK++   AG++ G    S        K  RNA G + LA A
Sbjct: 1  MPKNKTHSGSKKRFKVTGSGKIQRLQAGRKSGAAFASAPTTGSRKKHRRNA-GLVELAPA 59

Query: 54 DAKKV 58
          D K+ 
Sbjct: 60 DVKRA 64


>gi|104781108|ref|YP_607606.1| 50S ribosomal protein L35 [Pseudomonas entomophila L48]
 gi|148548431|ref|YP_001268533.1| 50S ribosomal protein L35 [Pseudomonas putida F1]
 gi|161378131|ref|NP_744615.2| 50S ribosomal protein L35 [Pseudomonas putida KT2440]
 gi|167034475|ref|YP_001669706.1| 50S ribosomal protein L35 [Pseudomonas putida GB-1]
 gi|325276810|ref|ZP_08142511.1| 50S ribosomal protein L35 [Pseudomonas sp. TJI-51]
 gi|38372461|sp|Q88K25|RL35_PSEPK RecName: Full=50S ribosomal protein L35
 gi|122403810|sp|Q1IC13|RL35_PSEE4 RecName: Full=50S ribosomal protein L35
 gi|166199823|sp|A5W5D9|RL35_PSEP1 RecName: Full=50S ribosomal protein L35
 gi|189042780|sp|B0KKR6|RL35_PSEPG RecName: Full=50S ribosomal protein L35
 gi|95110095|emb|CAK14800.1| 50S ribosomal subunit protein A [Pseudomonas entomophila L48]
 gi|148512489|gb|ABQ79349.1| LSU ribosomal protein L35P [Pseudomonas putida F1]
 gi|166860963|gb|ABY99370.1| ribosomal protein L35 [Pseudomonas putida GB-1]
 gi|313499444|gb|ADR60810.1| RpmI [Pseudomonas putida BIRD-1]
 gi|324098048|gb|EGB96193.1| 50S ribosomal protein L35 [Pseudomonas sp. TJI-51]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG  +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTASG-FKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVER 59


>gi|448403|prf||1917188D ribosomal protein L35
          Length = 69

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+GK + + A  RH + K++    R+ R  ++++  D  KV +
Sbjct: 5  MPKIKTLRSAAKRFKKTASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSKGDISKV-K 63

Query: 61 NYLP 64
          ++LP
Sbjct: 64 SFLP 67


>gi|258592604|emb|CBE68913.1| 50S ribosomal protein L35 [NC10 bacterium 'Dutch sediment']
          Length = 67

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          +PK+KT   + KRF +T TGK+R   A K H +  +S K  RN R   +++ AD  ++ R
Sbjct: 3  VPKIKTLKGAAKRFKMTGTGKIRRNKASKSHLLTGKSRKRKRNLRQPGLVSKADTARMER 62


>gi|313848269|emb|CBY17270.1| 50S ribosomal protein L35 [Chlamydophila psittaci RD1]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMK+N S   RF +T +G+++    GKRH + K+S++  RN
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRN 43


>gi|21672409|ref|NP_660476.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
 gi|1350728|sp|P49240|RL35_BUCAP RecName: Full=50S ribosomal protein L35
 gi|868029|gb|AAC43607.1| large ribosomal subunit protein L35 [Buchnera aphidicola]
 gi|21623018|gb|AAM67687.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
 gi|1098082|prf||2115235D ribosomal protein L35
          Length = 65

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+GK + + A  RH + K++    R+ R  ++++  D  KV +
Sbjct: 1  MPKIKTLRSAAKRFKKTASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSKGDISKV-K 59

Query: 61 NYLP 64
          ++LP
Sbjct: 60 SFLP 63


>gi|29840527|ref|NP_829633.1| 50S ribosomal protein L35 [Chlamydophila caviae GPIC]
 gi|62185351|ref|YP_220136.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
 gi|89898051|ref|YP_515161.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
 gi|332287695|ref|YP_004422596.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
 gi|33301613|sp|Q822B3|RL35_CHLCV RecName: Full=50S ribosomal protein L35
 gi|81312498|sp|Q5L5A6|RL35_CHLAB RecName: Full=50S ribosomal protein L35
 gi|148840414|sp|Q255M2|RL35_CHLFF RecName: Full=50S ribosomal protein L35
 gi|29834876|gb|AAP05511.1| ribosomal protein L35 [Chlamydophila caviae GPIC]
 gi|62148418|emb|CAH64185.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
 gi|89331423|dbj|BAE81016.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
 gi|325507122|gb|ADZ18760.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
 gi|328914948|gb|AEB55781.1| ribosomal protein L35 [Chlamydophila psittaci 6BC]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMK+N S   RF +T +G+++    GKRH + K+S++  RN
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRN 43


>gi|83590592|ref|YP_430601.1| 50S ribosomal protein L35P [Moorella thermoacetica ATCC 39073]
 gi|148887082|sp|Q2RHN1|RL35_MOOTA RecName: Full=50S ribosomal protein L35
 gi|83573506|gb|ABC20058.1| LSU ribosomal protein L35P [Moorella thermoacetica ATCC 39073]
          Length = 66

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR  +TA+GKV+   A K H +  ++ K  R  R   ++ S D ++V R
Sbjct: 1  MPKMKTHRGAAKRLRVTASGKVKRFRAYKSHLLASKTPKQKRRLRHPALVDSTDRRRVAR 60


>gi|226941671|ref|YP_002796745.1| 50S ribosomal protein L35 [Laribacter hongkongensis HLHK9]
 gi|254802455|sp|C1DDA4|RL35_LARHH RecName: Full=50S ribosomal protein L35
 gi|226716598|gb|ACO75736.1| RpmI [Laribacter hongkongensis HLHK9]
          Length = 65

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKR  +   G V+   A KRH + K++ K  R  RGT+++   +   V R
Sbjct: 1  MPKMKTKSSAKKRLKVLGNGGVKRSMAFKRHILTKKTTKTKRQLRGTVMVHETNMASV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|24984029|gb|AAN68079.1|AE016439_14 ribosomal protein L35 [Pseudomonas putida KT2440]
          Length = 69

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG  +L  +D  KV R
Sbjct: 6  MPKMKTKSGAAKRFLKTASG-FKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVER 64


>gi|161611232|ref|YP_278725.2| 50S ribosomal protein L35 [Mycoplasma synoviae 53]
 gi|118573014|sp|Q4A5F7|RL35_MYCS5 RecName: Full=50S ribosomal protein L35
          Length = 62

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT S+ KKR  +TATGK++ + A + H    ++ K  R +R    +  +D K+ 
Sbjct: 1  MPKMKTKSALKKRVKVTATGKIKREQAFRSHLAQNKTKKQKRQSRKASFMKRSDFKRF 58


>gi|307545106|ref|YP_003897585.1| 50S ribosomal protein L35 [Halomonas elongata DSM 2581]
 gi|307217130|emb|CBV42400.1| 50S ribosomal protein L35 [Halomonas elongata DSM 2581]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R+ RG   +  AD K +++
Sbjct: 1  MPKIKSNSGAAKRFKKTANG-FKHKQSFRSHILTKKSTKRKRHLRGMKQIHDAD-KPLVQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|293604702|ref|ZP_06687102.1| 50S ribosomal protein L35 [Achromobacter piechaudii ATCC 43553]
 gi|311105457|ref|YP_003978310.1| 50S ribosomal protein L35 [Achromobacter xylosoxidans A8]
 gi|292816871|gb|EFF75952.1| 50S ribosomal protein L35 [Achromobacter piechaudii ATCC 43553]
 gi|310760146|gb|ADP15595.1| ribosomal protein L35 [Achromobacter xylosoxidans A8]
          Length = 65

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +  ++   V
Sbjct: 1  MPKMKTKKSASKRFKVRGSGSIKRGQAFKRHILTKKTTKAKRQLRGSTAVHESNVASV 58


>gi|120554976|ref|YP_959327.1| ribosomal protein L35 [Marinobacter aquaeolei VT8]
 gi|149374487|ref|ZP_01892261.1| 50S ribosomal protein L35 [Marinobacter algicola DG893]
 gi|166231195|sp|A1U2C1|RL35_MARAV RecName: Full=50S ribosomal protein L35
 gi|120324825|gb|ABM19140.1| LSU ribosomal protein L35P [Marinobacter aquaeolei VT8]
 gi|149361190|gb|EDM49640.1| 50S ribosomal protein L35 [Marinobacter algicola DG893]
          Length = 63

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + +   H + K+S K  R  RGT ++A +D   + R
Sbjct: 1  MPKMKTKSGATKRFKKTATG-FKHKQSFTSHILTKKSPKRKRQLRGTKLIAKSDVASIKR 59


>gi|256830758|ref|YP_003159486.1| 50S riboosomal protein L35 [Desulfomicrobium baculatum DSM 4028]
 gi|256579934|gb|ACU91070.1| ribosomal protein L35 [Desulfomicrobium baculatum DSM 4028]
          Length = 66

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KTN S+ KRF +T TGKV+   A  RH + K+S K  R  R + + A +     IR
Sbjct: 1  MSKVKTNRSAAKRFRVTGTGKVKRSHANMRHILTKKSAKRKRQLRQSTMTAQSCV-GAIR 59

Query: 61 NYLP 64
            +P
Sbjct: 60 RMVP 63


>gi|146307006|ref|YP_001187471.1| 50S ribosomal protein L35 [Pseudomonas mendocina ymp]
 gi|166199822|sp|A4XTS3|RL35_PSEMY RecName: Full=50S ribosomal protein L35
 gi|145575207|gb|ABP84739.1| LSU ribosomal protein L35P [Pseudomonas mendocina ymp]
          Length = 64

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG+ ++  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTASG-YKHKHAFKSHILTKMSTKRKRQLRGSSLIGPSDVAKVER 59


>gi|49082302|gb|AAT50551.1| PA2742 [synthetic construct]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K + K  R  RGT +L  +D  +V R
Sbjct: 1  MPKMKTKSGAAKRFKKTAGG-LKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVER 59

Query: 61 NYLPNG 66
          +    G
Sbjct: 60 SLRLRG 65


>gi|256372442|ref|YP_003110266.1| ribosomal protein L35 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009026|gb|ACU54593.1| ribosomal protein L35 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ +K RF  T TGK+  + A   H + K+S+  +R      VL+  D ++ +R
Sbjct: 1  MPKMKTDTGAKARFKRTGTGKLMRRHAFTSHLLGKKSSSRLRRLHREGVLSRGDTRRALR 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|205374569|ref|ZP_03227365.1| 50S ribosomal protein L35 [Bacillus coahuilensis m4-4]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R   V+++ D K+ IR
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKGAVVSAGDYKR-IR 59

Query: 61 NYLPN 65
          + L N
Sbjct: 60 HMLDN 64


>gi|73540971|ref|YP_295491.1| 50S ribosomal protein L35 [Ralstonia eutropha JMP134]
 gi|148887098|sp|Q472N6|RL35_RALEJ RecName: Full=50S ribosomal protein L35
 gi|72118384|gb|AAZ60647.1| Ribosomal protein L35 [Ralstonia eutropha JMP134]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF+    G  +   A KRH + K++ K  R+ RGT  +   + K V
Sbjct: 1  MPKMKTKKSASKRFTARPNGSFKRGQAFKRHILTKKTTKNKRHLRGTQDVHETNLKSV 58


>gi|269218566|ref|ZP_06162420.1| ribosomal protein L35 [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211677|gb|EEZ78017.1| ribosomal protein L35 [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S++  R       + +A+ K V R
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQANKRHLLEHKSSRRTRRLAMDQPVDAANLKSVKR 60


>gi|294508834|ref|YP_003572893.1| 50S ribosomal protein L35 [Salinibacter ruber M8]
 gi|294345163|emb|CBH25941.1| 50S ribosomal protein L35 [Salinibacter ruber M8]
          Length = 78

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+
Sbjct: 14 MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVV 63


>gi|228469285|ref|ZP_04054311.1| ribosomal protein L35 [Porphyromonas uenonis 60-3]
 gi|228309184|gb|EEK17786.1| ribosomal protein L35 [Porphyromonas uenonis 60-3]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT S +KKRF +T +G+V+ + A K H + K+S K  RN   T ++   +   V
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRVKRKHAYKSHILTKKSKKRKRNLTYTALVHPHNEHSV 58


>gi|225019252|ref|ZP_03708444.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
          DSM 5476]
 gi|224947883|gb|EEG29092.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
          DSM 5476]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPK KT+S +KKRF +T  GKV+   A K H + K+S K  R  R GT    +  A  VI
Sbjct: 1  MPKQKTHSGAKKRFKLTKNGKVKRAHAFKSHILNKKSTKRKRRLRQGTYADVTNTA--VI 58

Query: 60 RNYLP 64
          +  +P
Sbjct: 59 KKLIP 63


>gi|282855601|ref|ZP_06264915.1| ribosomal protein L35 [Pyramidobacter piscolens W5455]
 gi|282586531|gb|EFB91785.1| ribosomal protein L35 [Pyramidobacter piscolens W5455]
          Length = 66

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+S +KKRFS T +GK++ Q  G+RH +  ++ K  R  R   +LA+   ++++R  
Sbjct: 4  KAKTHSGAKKRFSYTGSGKIKYQKNGRRHLLSTKNAKRHRRLRQAGLLANGQ-EEMLRLM 62

Query: 63 LP 64
          +P
Sbjct: 63 MP 64


>gi|304310700|ref|YP_003810298.1| 50S ribosomal protein L35 [gamma proteobacterium HdN1]
 gi|301796433|emb|CBL44641.1| 50S ribosomal protein L35 [gamma proteobacterium HdN1]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA G  R QA  KRH + K+S K IR  R   ++  +D   V R
Sbjct: 1  MPKIKTNRGAAKRFRKTANGFKRKQAF-KRHILTKKSPKRIRQLRPMSMVHPSDVALVQR 59


>gi|253577272|ref|ZP_04854591.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
          D14]
 gi|251843386|gb|EES71415.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
          D14]
          Length = 66

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT +GKVR   A + H +  +S +  R    + V  + D +++
Sbjct: 1  MPKMKTHSSLKGRFKITGSGKVRRYKANRNHLLSHKSKRAKRVLANSPVAYAGDVRRM 58


>gi|94264273|ref|ZP_01288067.1| Ribosomal protein L35 [delta proteobacterium MLMS-1]
 gi|93455318|gb|EAT05525.1| Ribosomal protein L35 [delta proteobacterium MLMS-1]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLAS 52
          MPKMKTN  + KRF  T +GKV  + A   H + K+S K  R+ R GT+V A+
Sbjct: 1  MPKMKTNRGAAKRFKCTGSGKVARRKAFSSHILTKKSTKRKRSLRQGTLVDAA 53


>gi|167767665|ref|ZP_02439718.1| hypothetical protein CLOSS21_02198 [Clostridium sp. SS2/1]
 gi|317499154|ref|ZP_07957431.1| ribosomal protein L35 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710682|gb|EDS21261.1| hypothetical protein CLOSS21_02198 [Clostridium sp. SS2/1]
 gi|291560799|emb|CBL39599.1| LSU ribosomal protein L35P [butyrate-producing bacterium SSC/2]
 gi|316893567|gb|EFV15772.1| ribosomal protein L35 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF  T TGK++   A K H + K+S K  RN R    +  A  +K ++
Sbjct: 1  MPKMKTCRAAAKRFKKTGTGKLKRNKAYKSHILTKKSPKRKRNLRKA-AMTDATNEKNMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|254302739|ref|ZP_04970097.1| ribosomal protein L35 [Fusobacterium nucleatum subsp. polymorphum
          ATCC 10953]
 gi|148322931|gb|EDK88181.1| ribosomal protein L35 [Fusobacterium nucleatum subsp. polymorphum
          ATCC 10953]
          Length = 68

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +   V+     KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNHLKKDAVVTET-YKKHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|91715065|gb|ABE54991.1| LSU ribosomal protein L35P [Shewanella denitrificans OS217]
          Length = 82

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R Q A  RH + K+S K  R+ R   ++A +D   + R
Sbjct: 19 MPKMKTDKGVAKRFKKTANGFKRKQ-AHLRHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 77

Query: 61 NYLP 64
            LP
Sbjct: 78 Q-LP 80


>gi|126174367|ref|YP_001050516.1| 50S ribosomal protein L35 [Shewanella baltica OS155]
 gi|153000741|ref|YP_001366422.1| 50S ribosomal protein L35 [Shewanella baltica OS185]
 gi|160875440|ref|YP_001554756.1| 50S ribosomal protein L35 [Shewanella baltica OS195]
 gi|217973358|ref|YP_002358109.1| 50S ribosomal protein L35 [Shewanella baltica OS223]
 gi|304408772|ref|ZP_07390393.1| ribosomal protein L35 [Shewanella baltica OS183]
 gi|307302775|ref|ZP_07582530.1| ribosomal protein L35 [Shewanella baltica BA175]
 gi|166199833|sp|A3D4I4|RL35_SHEB5 RecName: Full=50S ribosomal protein L35
 gi|166199834|sp|A6WNH0|RL35_SHEB8 RecName: Full=50S ribosomal protein L35
 gi|189042786|sp|A9L2Q7|RL35_SHEB9 RecName: Full=50S ribosomal protein L35
 gi|254802468|sp|B8EES8|RL35_SHEB2 RecName: Full=50S ribosomal protein L35
 gi|125997572|gb|ABN61647.1| LSU ribosomal protein L35P [Shewanella baltica OS155]
 gi|151365359|gb|ABS08359.1| ribosomal protein L35 [Shewanella baltica OS185]
 gi|160860962|gb|ABX49496.1| ribosomal protein L35 [Shewanella baltica OS195]
 gi|217498493|gb|ACK46686.1| ribosomal protein L35 [Shewanella baltica OS223]
 gi|304352593|gb|EFM16990.1| ribosomal protein L35 [Shewanella baltica OS183]
 gi|306913135|gb|EFN43557.1| ribosomal protein L35 [Shewanella baltica BA175]
 gi|315267630|gb|ADT94483.1| ribosomal protein L35 [Shewanella baltica OS678]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVSKADVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|114563197|ref|YP_750710.1| 50S ribosomal protein L35 [Shewanella frigidimarina NCIMB 400]
 gi|162210775|ref|YP_562714.2| 50S ribosomal protein L35 [Shewanella denitrificans OS217]
 gi|170726835|ref|YP_001760861.1| 50S ribosomal protein L35 [Shewanella woodyi ATCC 51908]
 gi|122299728|sp|Q082E3|RL35_SHEFN RecName: Full=50S ribosomal protein L35
 gi|226725065|sp|B1KG59|RL35_SHEWM RecName: Full=50S ribosomal protein L35
 gi|114334490|gb|ABI71872.1| LSU ribosomal protein L35P [Shewanella frigidimarina NCIMB 400]
 gi|169812182|gb|ACA86766.1| ribosomal protein L35 [Shewanella woodyi ATCC 51908]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   ++A +D   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|308068136|ref|YP_003869741.1| 50S ribosomal protein L35 [Paenibacillus polymyxa E681]
 gi|305857415|gb|ADM69203.1| 50S ribosomal protein L35 [Paenibacillus polymyxa E681]
          Length = 66

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+SS K RF IT TGKV    A K H +  +S +  R       +A  D K++
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVMRYKAYKNHLLSHKSKRAKRVLGTNPEMAPGDVKRL 58


>gi|118573022|sp|Q2RYT6|RL35_SALRD RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+
Sbjct: 1  MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVV 50


>gi|11467701|ref|NP_050753.1| ribosomal protein L35 [Guillardia theta]
 gi|6093990|sp|O78496|RK35_GUITH RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|3603026|gb|AAC35687.1| ribosomal protein L35 [Guillardia theta]
          Length = 66

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT  S++KRF I+A GK   + A K H + K+++K  RN +  M++   +
Sbjct: 1  MPKLKTRKSARKRFYISAKGKFVRKRAFKSHILEKKTSKRKRNLKRKMIVFKGE 54


>gi|238924312|ref|YP_002937828.1| hypothetical protein EUBREC_1952 [Eubacterium rectale ATCC 33656]
 gi|259647354|sp|C4ZBG2|RL35_EUBR3 RecName: Full=50S ribosomal protein L35
 gi|238875987|gb|ACR75694.1| Hypothetical protein EUBREC_1952 [Eubacterium rectale ATCC 33656]
 gi|291525082|emb|CBK90669.1| LSU ribosomal protein L35P [Eubacterium rectale DSM 17629]
 gi|291529177|emb|CBK94763.1| LSU ribosomal protein L35P [Eubacterium rectale M104/1]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   +    + K
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKTKRNLRKATMTDETNVK 56


>gi|167771639|ref|ZP_02443692.1| hypothetical protein ANACOL_03011 [Anaerotruncus colihominis DSM
          17241]
 gi|167666279|gb|EDS10409.1| hypothetical protein ANACOL_03011 [Anaerotruncus colihominis DSM
          17241]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          MPK+KT++ +KKRF +T  GKV+   A K H + K+  K  R  R
Sbjct: 1  MPKLKTHTGAKKRFKLTKNGKVKRAHAYKSHILTKKDTKRTRRLR 45


>gi|15597938|ref|NP_251432.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PAO1]
 gi|116050732|ref|YP_790447.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152983973|ref|YP_001347872.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PA7]
 gi|218891078|ref|YP_002439944.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa LESB58]
 gi|254235720|ref|ZP_04929043.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa C3719]
 gi|254241195|ref|ZP_04934517.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 2192]
 gi|296388795|ref|ZP_06878270.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PAb1]
 gi|313107811|ref|ZP_07793985.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 39016]
 gi|20139741|sp|Q9I0A1|RL35_PSEAE RecName: Full=50S ribosomal protein L35
 gi|122259857|sp|Q02NN9|RL35_PSEAB RecName: Full=50S ribosomal protein L35
 gi|166199821|sp|A6V487|RL35_PSEA7 RecName: Full=50S ribosomal protein L35
 gi|226725051|sp|B7V190|RL35_PSEA8 RecName: Full=50S ribosomal protein L35
 gi|9948820|gb|AAG06130.1|AE004702_7 50S ribosomal protein L35 [Pseudomonas aeruginosa PAO1]
 gi|115585953|gb|ABJ11968.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167651|gb|EAZ53162.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa C3719]
 gi|126194573|gb|EAZ58636.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 2192]
 gi|150959131|gb|ABR81156.1| ribosomal protein L35 [Pseudomonas aeruginosa PA7]
 gi|218771303|emb|CAW27068.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa LESB58]
 gi|310880487|gb|EFQ39081.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 39016]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K + K  R  RGT +L  +D  +V R
Sbjct: 1  MPKMKTKSGAAKRFKKTAGG-LKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVER 59

Query: 61 NY 62
          + 
Sbjct: 60 SL 61


>gi|187929055|ref|YP_001899542.1| 50S ribosomal protein L35 [Ralstonia pickettii 12J]
 gi|241663241|ref|YP_002981601.1| 50S ribosomal protein L35 [Ralstonia pickettii 12D]
 gi|309782529|ref|ZP_07677252.1| ribosomal protein L35 [Ralstonia sp. 5_7_47FAA]
 gi|226725053|sp|B2UGJ6|RL35_RALPJ RecName: Full=50S ribosomal protein L35
 gi|187725945|gb|ACD27110.1| ribosomal protein L35 [Ralstonia pickettii 12J]
 gi|240865268|gb|ACS62929.1| ribosomal protein L35 [Ralstonia pickettii 12D]
 gi|308918620|gb|EFP64294.1| ribosomal protein L35 [Ralstonia sp. 5_7_47FAA]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R+ RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|119945877|ref|YP_943557.1| ribosomal protein L35 [Psychromonas ingrahamii 37]
 gi|119864481|gb|ABM03958.1| LSU ribosomal protein L35P [Psychromonas ingrahamii 37]
          Length = 94

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S K  R+ R   ++   D  + IR
Sbjct: 30 MPKLKTNKGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRAQSMVNKVDVPQ-IR 88

Query: 61 NYLP 64
            LP
Sbjct: 89 RMLP 92


>gi|325662119|ref|ZP_08150737.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085916|ref|ZP_08334999.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471568|gb|EGC74788.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406839|gb|EGG86344.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K  K 
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|157962082|ref|YP_001502116.1| 50S ribosomal protein L35 [Shewanella pealeana ATCC 700345]
 gi|167623948|ref|YP_001674242.1| 50S ribosomal protein L35 [Shewanella halifaxensis HAW-EB4]
 gi|189042787|sp|B0TT22|RL35_SHEHH RecName: Full=50S ribosomal protein L35
 gi|189042788|sp|A8H4U4|RL35_SHEPA RecName: Full=50S ribosomal protein L35
 gi|157847082|gb|ABV87581.1| ribosomal protein L35 [Shewanella pealeana ATCC 700345]
 gi|167353970|gb|ABZ76583.1| ribosomal protein L35 [Shewanella halifaxensis HAW-EB4]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+   +KRF  TA G  R QA   RH + K+S K  R+ R    +A +D   + R
Sbjct: 1  MPKMKTDKGVQKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|303248734|ref|ZP_07334987.1| ribosomal protein L35 [Desulfovibrio fructosovorans JJ]
 gi|302489899|gb|EFL49827.1| ribosomal protein L35 [Desulfovibrio fructosovorans JJ]
          Length = 65

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN-ARGTMVLASADAKKVI 59
          MPKMKTN S+ KRF+ T +GK   +    RH + K++ K  R   +GT+V  + +  K +
Sbjct: 1  MPKMKTNRSAAKRFTKTGSGKFARRRQNLRHILTKKNAKRTRRLGQGTLVDKANE--KAV 58

Query: 60 RNYLP 64
          R  LP
Sbjct: 59 RRLLP 63


>gi|15827730|ref|NP_301993.1| 50S ribosomal protein L35 [Mycobacterium leprae TN]
 gi|221230207|ref|YP_002503623.1| 50S ribosomal protein L35 [Mycobacterium leprae Br4923]
 gi|13633839|sp|Q9CC21|RL35_MYCLE RecName: Full=50S ribosomal protein L35
 gi|254802462|sp|B8ZRJ6|RL35_MYCLB RecName: Full=50S ribosomal protein L35
 gi|13093281|emb|CAC31776.1| 50S ribosomal protein L35 [Mycobacterium leprae]
 gi|219933314|emb|CAR71490.1| 50S ribosomal protein L35 [Mycobacterium leprae Br4923]
          Length = 64

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH    + +   R   G   +++ D ++V  
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLFEHKPSTRTRRLDGHTRVSANDTQRV-- 58

Query: 61 NYLPNG 66
          N L NG
Sbjct: 59 NSLLNG 64


>gi|163856955|ref|YP_001631253.1| 50S ribosomal protein L35 [Bordetella petrii DSM 12804]
 gi|226713827|sp|A9IPU4|RL35_BORPD RecName: Full=50S ribosomal protein L35
 gi|163260683|emb|CAP42985.1| 50S ribosomal protein L35 [Bordetella petrii]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V
Sbjct: 1  MPKMKTKKSASKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV 58


>gi|83814993|ref|YP_446895.1| hypothetical protein SRU_2804 [Salinibacter ruber DSM 13855]
 gi|83756387|gb|ABC44500.1| conserved domain protein [Salinibacter ruber DSM 13855]
          Length = 115

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
           MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+
Sbjct: 51  MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVV 100


>gi|303325497|ref|ZP_07355940.1| ribosomal protein L35 [Desulfovibrio sp. 3_1_syn3]
 gi|302863413|gb|EFL86344.1| ribosomal protein L35 [Desulfovibrio sp. 3_1_syn3]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRS-NKFIRNARGTMVLASADAKKVI 59
          MPK+KT  ++ KRF +T +GK + +    RH + K++  + +R  + T+V ++ +  K +
Sbjct: 1  MPKIKTRRAAAKRFQLTGSGKYKRRRQNLRHILTKKAPGRKMRLGQATLVDSTNE--KAV 58

Query: 60 RNYLPNG 66
          R  LPNG
Sbjct: 59 RRMLPNG 65


>gi|225022605|ref|ZP_03711797.1| hypothetical protein CORMATOL_02647 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305682179|ref|ZP_07404983.1| ribosomal protein L35 [Corynebacterium matruchotii ATCC 14266]
 gi|224944513|gb|EEG25722.1| hypothetical protein CORMATOL_02647 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305658652|gb|EFM48155.1| ribosomal protein L35 [Corynebacterium matruchotii ATCC 14266]
          Length = 64

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR   T +GK+R + A +RH +  + +K  R  +GT  +A AD K+V R
Sbjct: 2  KQKTHKGTAKRIKTTGSGKLRRERANRRHLLEGKPSKRTRRLKGTTDVAPADTKRVKR 59


>gi|148654115|ref|YP_001281208.1| 50S ribosomal protein L35 [Psychrobacter sp. PRwf-1]
 gi|172048592|sp|A5WHW7|RL35_PSYWF RecName: Full=50S ribosomal protein L35
 gi|148573199|gb|ABQ95258.1| LSU ribosomal protein L35P [Psychrobacter sp. PRwf-1]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT   + KRF  TA G  R QA  KRH + K+S K IR  RGT ++  AD   V R
Sbjct: 4  KMKTKRGAAKRFKKTANGFKRKQAF-KRHILTKKSPKRIRQLRGTKLVHVADVAAVRR 60


>gi|332975687|gb|EGK12572.1| 50S ribosomal protein L35 [Psychrobacter sp. 1501(2011)]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT   + KRF  TA G  R QA  KRH + K+S K IR  RGT ++  AD   V R
Sbjct: 4  KMKTKRGAAKRFKKTANGFKRKQAF-KRHILTKKSPKRIRQLRGTKLVHVADVAAVRR 60


>gi|238021046|ref|ZP_04601472.1| hypothetical protein GCWU000324_00943 [Kingella oralis ATCC
          51147]
 gi|237868026|gb|EEP69032.1| hypothetical protein GCWU000324_00943 [Kingella oralis ATCC
          51147]
          Length = 76

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A K H + K++ K  R  RGT ++   D   V
Sbjct: 12 MPKMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMVNERDMASV 69


>gi|146293112|ref|YP_001183536.1| 50S ribosomal protein L35 [Shewanella putrefaciens CN-32]
 gi|166199836|sp|A4Y704|RL35_SHEPC RecName: Full=50S ribosomal protein L35
 gi|145564802|gb|ABP75737.1| LSU ribosomal protein L35P [Shewanella putrefaciens CN-32]
 gi|319426375|gb|ADV54449.1| ribosomal protein L35 [Shewanella putrefaciens 200]
          Length = 64

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVSKADVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|94310107|ref|YP_583317.1| 50S ribosomal protein L35 [Cupriavidus metallidurans CH34]
 gi|113867359|ref|YP_725848.1| 50S ribosomal protein L35 [Ralstonia eutropha H16]
 gi|194289385|ref|YP_002005292.1| 50S ribosomal protein l35 [Cupriavidus taiwanensis LMG 19424]
 gi|123329356|sp|Q0KBZ1|RL35_RALEH RecName: Full=50S ribosomal protein L35
 gi|148887099|sp|Q1LP78|RL35_RALME RecName: Full=50S ribosomal protein L35
 gi|226724990|sp|B3R4J3|RL35_CUPTR RecName: Full=50S ribosomal protein L35
 gi|93353959|gb|ABF08048.1| 50S ribosomal subunit protein L35 [Cupriavidus metallidurans
          CH34]
 gi|113526135|emb|CAJ92480.1| LSU ribosomal protein L35 [Ralstonia eutropha H16]
 gi|193223220|emb|CAQ69225.1| 50S ribosomal subunit protein A [Cupriavidus taiwanensis LMG
          19424]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF+    G  +   A KRH + K++ K  R  RGT  +   + K V
Sbjct: 1  MPKMKTKKSASKRFTARPNGSFKRGQAFKRHILTKKTTKNKRQLRGTQDVHETNLKSV 58


>gi|146296775|ref|YP_001180546.1| ribosomal protein L35 [Caldicellulosiruptor saccharolyticus DSM
          8903]
 gi|166231167|sp|A4XKC0|RL35_CALS8 RecName: Full=50S ribosomal protein L35
 gi|145410351|gb|ABP67355.1| LSU ribosomal protein L35P [Caldicellulosiruptor saccharolyticus
          DSM 8903]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+++ S +  K ++
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKSRKRKRNLKKTVIVDSTNV-KAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|120598810|ref|YP_963384.1| 50S ribosomal protein L35 [Shewanella sp. W3-18-1]
 gi|120558903|gb|ABM24830.1| LSU ribosomal protein L35P [Shewanella sp. W3-18-1]
          Length = 82

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R Q A  RH + K+S K  R+ R   +++ AD   + R
Sbjct: 19 MPKMKTDRGVAKRFKKTANGFKRKQ-AHLRHILTKKSTKRKRHLRAKCLVSKADVPAIAR 77

Query: 61 NYLP 64
            LP
Sbjct: 78 Q-LP 80


>gi|300691317|ref|YP_003752312.1| 50S ribosomal subunit protein A [Ralstonia solanacearum PSI07]
 gi|299078377|emb|CBJ51027.1| 50S ribosomal subunit protein A [Ralstonia solanacearum PSI07]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R+ RGT  +   + K V R
Sbjct: 1  MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|225574525|ref|ZP_03783135.1| hypothetical protein RUMHYD_02602 [Blautia hydrogenotrophica DSM
          10507]
 gi|225038256|gb|EEG48502.1| hypothetical protein RUMHYD_02602 [Blautia hydrogenotrophica DSM
          10507]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R + V  S + K
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKLVRSKAYKSHILTKKSQKRKRNLRKSTVTDSTNVK 56


>gi|313674624|ref|YP_004052620.1| LSU ribosomal protein l35p [Marivirga tractuosa DSM 4126]
 gi|312941322|gb|ADR20512.1| LSU ribosomal protein L35P [Marivirga tractuosa DSM 4126]
          Length = 64

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT S +KKRF +T +GK++ + A K H + K+  K  R      ++  +D  +V
Sbjct: 1  MPKVKTKSGAKKRFKLTGSGKIKRKHAYKSHILTKKETKQKRRLTDMGLVHKSDVGRV 58


>gi|17546298|ref|NP_519700.1| 50S ribosomal protein L35 [Ralstonia solanacearum GMI1000]
 gi|20139462|sp|Q8XZ27|RL35_RALSO RecName: Full=50S ribosomal protein L35
 gi|17428595|emb|CAD15281.1| probable 50s ribosomal protein l35 [Ralstonia solanacearum
          GMI1000]
 gi|299066588|emb|CBJ37778.1| 50S ribosomal subunit protein A [Ralstonia solanacearum CMR15]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R  RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|167461621|ref|ZP_02326710.1| hypothetical protein Plarl_03535 [Paenibacillus larvae subsp.
          larvae BRL-230010]
          Length = 34

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT+SS K RF IT TGKV+   A + H
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNH 31


>gi|166032009|ref|ZP_02234838.1| hypothetical protein DORFOR_01711 [Dorea formicigenerans ATCC
          27755]
 gi|166028462|gb|EDR47219.1| hypothetical protein DORFOR_01711 [Dorea formicigenerans ATCC
          27755]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R   +    + K  K 
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRHATIADETNVKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|187918063|ref|YP_001883626.1| 50S ribosomal protein L35 [Borrelia hermsii DAH]
 gi|226713826|sp|B2RZQ0|RL35_BORHD RecName: Full=50S ribosomal protein L35
 gi|119860911|gb|AAX16706.1| LSU ribosomal protein L35P [Borrelia hermsii DAH]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT  S++KR++ T+ GKV+ +    RH + K+S+K  R    + +++S++ K+ I+
Sbjct: 1  MSKMKTCKSARKRYAFTSKGKVKYKKQNLRHILTKKSSKRRRKLGKSGLVSSSETKR-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 TLLP 63


>gi|317403226|gb|EFV83745.1| 50S ribosomal protein L35 [Achromobacter xylosoxidans C54]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V
Sbjct: 1  MPKMKTKKSAAKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV 58


>gi|257455763|ref|ZP_05620989.1| ribosomal protein L35 [Enhydrobacter aerosaccus SK60]
 gi|257446777|gb|EEV21794.1| ribosomal protein L35 [Enhydrobacter aerosaccus SK60]
          Length = 63

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT   + KRF  T  G  R QA  KRH + K+S K IR  RG  ++  +D K+V R
Sbjct: 2  KLKTRRGAAKRFKKTGNGIKRKQAF-KRHILTKKSPKRIRQLRGCKLVHVSDEKRVYR 58


>gi|163752535|ref|ZP_02159721.1| ribosomal protein L35 [Shewanella benthica KT99]
 gi|294141072|ref|YP_003557050.1| 50S ribosomal protein L35 [Shewanella violacea DSS12]
 gi|161327590|gb|EDP98788.1| ribosomal protein L35 [Shewanella benthica KT99]
 gi|293327541|dbj|BAJ02272.1| ribosomal protein L35 [Shewanella violacea DSS12]
          Length = 64

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVSKADMPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|150016446|ref|YP_001308700.1| 50S ribosomal protein L35 [Clostridium beijerinckii NCIMB 8052]
 gi|189042761|sp|A6LTR4|RL35_CLOB8 RecName: Full=50S ribosomal protein L35
 gi|149902911|gb|ABR33744.1| ribosomal protein L35 [Clostridium beijerinckii NCIMB 8052]
          Length = 65

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A + H + K+S+K  R+ R    ++ +   KV++
Sbjct: 1  MPKMKTHRGAAKRFRKTGTGKLKRGKAFRSHILTKKSSKTKRHLRKAGYVSDSQL-KVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|116333671|ref|YP_795198.1| ribosomal protein L35 [Lactobacillus brevis ATCC 367]
 gi|122269642|sp|Q03RK5|RL35_LACBA RecName: Full=50S ribosomal protein L35
 gi|116099018|gb|ABJ64167.1| LSU ribosomal protein L35P [Lactobacillus brevis ATCC 367]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPKMKTN ++ KRF +TA G +++  A   H    ++ K  RN RGT ++
Sbjct: 1  MPKMKTNRAAAKRFKVTAKGGIKSANAYTSHRFHGKTKKQRRNLRGTRMM 50


>gi|212715580|ref|ZP_03323708.1| hypothetical protein BIFCAT_00479 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225351393|ref|ZP_03742416.1| hypothetical protein BIFPSEUDO_02987 [Bifidobacterium
          pseudocatenulatum DSM 20438]
 gi|212660947|gb|EEB21522.1| hypothetical protein BIFCAT_00479 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225157737|gb|EEG71020.1| hypothetical protein BIFPSEUDO_02987 [Bifidobacterium
          pseudocatenulatum DSM 20438]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA++ +K
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATSQSK 56


>gi|46446337|ref|YP_007702.1| 50S ribosomal protein L35 [Candidatus Protochlamydia amoebophila
          UWE25]
 gi|54036262|sp|Q6MDC2|RL35_PARUW RecName: Full=50S ribosomal protein L35
 gi|46399978|emb|CAF23427.1| probable 50S ribosomal protein L35 [Candidatus Protochlamydia
          amoebophila UWE25]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          MPKMKT  +   +F +TATGK++A   G+RH +  ++ K  R  R
Sbjct: 1  MPKMKTRKAVASKFRVTATGKLKASRPGRRHKLTGKTPKRKRQLR 45


>gi|15828731|ref|NP_326091.1| 50S ribosomal protein L35 [Mycoplasma pulmonis UAB CTIP]
 gi|20139645|sp|Q98QV1|RL35_MYCPU RecName: Full=50S ribosomal protein L35
 gi|14089673|emb|CAC13433.1| 50S RIBOSOMAL PROTEIN L35 [Mycoplasma pulmonis]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+ S+ KKR  IT TGK++   A + H    ++ K  R +R   ++  +D K+ 
Sbjct: 1  MPKMKSKSALKKRIKITGTGKIKRHQAFRSHLAQNKTTKQKRQSRNAELMHKSDYKRF 58


>gi|119774902|ref|YP_927642.1| 50S ribosomal protein L35 [Shewanella amazonensis SB2B]
 gi|166199832|sp|A1S6G6|RL35_SHEAM RecName: Full=50S ribosomal protein L35
 gi|119767402|gb|ABL99972.1| LSU ribosomal protein L35P [Shewanella amazonensis SB2B]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   ++A  D   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCLVAKVDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|187478562|ref|YP_786586.1| 50S ribosomal protein L35 [Bordetella avium 197N]
 gi|148887064|sp|Q2KZL7|RL35_BORA1 RecName: Full=50S ribosomal protein L35
 gi|115423148|emb|CAJ49679.1| 50S ribosomal protein L35 [Bordetella avium 197N]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGT 47
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+
Sbjct: 1  MPKMKTKKSAAKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGS 47


>gi|89074410|ref|ZP_01160892.1| 50S ribosomal protein L35 [Photobacterium sp. SKA34]
 gi|90579637|ref|ZP_01235446.1| 50S ribosomal protein L35 [Vibrio angustum S14]
 gi|330445797|ref|ZP_08309449.1| ribosomal protein L35 [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
 gi|89049897|gb|EAR55438.1| 50S ribosomal protein L35 [Photobacterium sp. SKA34]
 gi|90439211|gb|EAS64393.1| 50S ribosomal protein L35 [Vibrio angustum S14]
 gi|328489988|dbj|GAA03946.1| ribosomal protein L35 [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNRGAAKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59


>gi|298206755|ref|YP_003714934.1| ribosomal protein L35 [Croceibacter atlanticus HTCC2559]
 gi|83849386|gb|EAP87254.1| ribosomal protein L35 [Croceibacter atlanticus HTCC2559]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK KT SS+KKRF +TA+GK++ + A K H
Sbjct: 1  MPKQKTKSSAKKRFKLTASGKIKRKHAFKSH 31


>gi|300781275|ref|ZP_07091129.1| 50S ribosomal protein L35 [Corynebacterium genitalium ATCC 33030]
 gi|300532982|gb|EFK54043.1| 50S ribosomal protein L35 [Corynebacterium genitalium ATCC 33030]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + AGKRH   K S K  R   GT  +A  D K+  R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGKRHLNEKLSAKRRRKLSGTTDVAKGDVKRTKR 59


>gi|269792336|ref|YP_003317240.1| 50S ribosomal protein L35 [Thermanaerovibrio acidaminovorans DSM
          6589]
 gi|269099971|gb|ACZ18958.1| ribosomal protein L35 [Thermanaerovibrio acidaminovorans DSM
          6589]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+S +KKRFS+T +GK+  + +G+ H +  ++ K  R  R   VL    A+ +
Sbjct: 1  MPKVKTHSGAKKRFSVTGSGKLVFKKSGRSHLLECKNAKRRRRLRKQGVLTGTIAENI 58


>gi|253580169|ref|ZP_04857436.1| 50S ribosomal protein L35 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848688|gb|EES76651.1| 50S ribosomal protein L35 [Ruminococcus sp. 5_1_39BFAA]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R + V+ + + K
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKLVRNKAYKSHILTKKSQKRKRNLRKSTVVDATNVK 56


>gi|83748299|ref|ZP_00945324.1| LSU ribosomal protein L35P [Ralstonia solanacearum UW551]
 gi|207724053|ref|YP_002254451.1| 50s ribosomal protein l35 [Ralstonia solanacearum MolK2]
 gi|207742948|ref|YP_002259340.1| 50s ribosomal protein l35 [Ralstonia solanacearum IPO1609]
 gi|300703880|ref|YP_003745482.1| 50S ribosomal subunit protein a [Ralstonia solanacearum CFBP2957]
 gi|83725031|gb|EAP72184.1| LSU ribosomal protein L35P [Ralstonia solanacearum UW551]
 gi|206589262|emb|CAQ36224.1| 50s ribosomal protein l35 [Ralstonia solanacearum MolK2]
 gi|206594343|emb|CAQ61270.1| 50s ribosomal protein l35 [Ralstonia solanacearum IPO1609]
 gi|299071543|emb|CBJ42867.1| 50S ribosomal subunit protein A [Ralstonia solanacearum CFBP2957]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R  RGT  +   + K V R
Sbjct: 1  MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|260655003|ref|ZP_05860491.1| ribosomal protein L35 [Jonquetella anthropi E3_33 E1]
 gi|260630318|gb|EEX48512.1| ribosomal protein L35 [Jonquetella anthropi E3_33 E1]
          Length = 68

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASA 53
          K K+ S++KKRFS+TATGKVR    GK H +  ++ K  R  R   +++ A
Sbjct: 5  KTKSRSAAKKRFSLTATGKVRYHKCGKSHLLGCKNAKHRRRLRKAGIVSDA 55


>gi|325116126|emb|CBZ51680.1| unnamed protein product [Neospora caninum Liverpool]
          Length = 437

 Score = 38.5 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL  A A+K +
Sbjct: 358 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGAMARKYL 414


>gi|119358271|ref|YP_912915.1| 50S ribosomal protein L35 [Chlorobium phaeobacteroides DSM 266]
 gi|166231174|sp|A1BJB4|RL35_CHLPD RecName: Full=50S ribosomal protein L35
 gi|119355620|gb|ABL66491.1| LSU ribosomal protein L35P [Chlorobium phaeobacteroides DSM 266]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R      +L SA  K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKHERMNGSHNLEKKNRKRSRRLHQATILDSAKEKQIRR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|193215698|ref|YP_001996897.1| 50S ribosomal protein L35 [Chloroherpeton thalassium ATCC 35110]
 gi|226724982|sp|B3QUU9|RL35_CHLT3 RecName: Full=50S ribosomal protein L35
 gi|193089175|gb|ACF14450.1| ribosomal protein L35 [Chloroherpeton thalassium ATCC 35110]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF +T +GKV+ +     H + K+S K  RN   + ++ ++  K V R
Sbjct: 1  MPKMKSHRGACKRFKVTGSGKVKREKMNASHILEKKSRKRKRNLHQSTLVDASQEKTVKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|15601054|ref|NP_232685.1| 50S ribosomal protein L35 [Vibrio cholerae O1 biovar eltor str.
          N16961]
 gi|121591864|ref|ZP_01679035.1| ribosomal protein L35 [Vibrio cholerae 2740-80]
 gi|121730162|ref|ZP_01682556.1| ribosomal protein L35 [Vibrio cholerae V52]
 gi|147672076|ref|YP_001215776.1| 50S ribosomal protein L35 [Vibrio cholerae O395]
 gi|153217651|ref|ZP_01951332.1| ribosomal protein L35 [Vibrio cholerae 1587]
 gi|153803266|ref|ZP_01957852.1| ribosomal protein L35 [Vibrio cholerae MZO-3]
 gi|153817543|ref|ZP_01970210.1| ribosomal protein L35 [Vibrio cholerae NCTC 8457]
 gi|153829070|ref|ZP_01981737.1| ribosomal protein L35 [Vibrio cholerae 623-39]
 gi|227811912|ref|YP_002811922.1| ribosomal protein L35 [Vibrio cholerae M66-2]
 gi|229506557|ref|ZP_04396066.1| LSU ribosomal protein L35p [Vibrio cholerae BX 330286]
 gi|229510647|ref|ZP_04400127.1| LSU ribosomal protein L35p [Vibrio cholerae B33]
 gi|229514761|ref|ZP_04404222.1| LSU ribosomal protein L35p [Vibrio cholerae TMA 21]
 gi|229517222|ref|ZP_04406667.1| LSU ribosomal protein L35p [Vibrio cholerae RC9]
 gi|229522962|ref|ZP_04412376.1| LSU ribosomal protein L35p [Vibrio cholerae TM 11079-80]
 gi|229526100|ref|ZP_04415504.1| LSU ribosomal protein L35p [Vibrio cholerae bv. albensis VL426]
 gi|229527751|ref|ZP_04417142.1| LSU ribosomal protein L35p [Vibrio cholerae 12129(1)]
 gi|229606036|ref|YP_002876740.1| 50S ribosomal protein L35 [Vibrio cholerae MJ-1236]
 gi|254225616|ref|ZP_04919224.1| ribosomal protein L35 [Vibrio cholerae V51]
 gi|254284961|ref|ZP_04959927.1| ribosomal protein L35 [Vibrio cholerae AM-19226]
 gi|255745912|ref|ZP_05419859.1| LSU ribosomal protein L35p [Vibrio cholera CIRS 101]
 gi|261212790|ref|ZP_05927074.1| LSU ribosomal protein L35p [Vibrio sp. RC341]
 gi|262163531|ref|ZP_06031277.1| LSU ribosomal protein L35p [Vibrio cholerae INDRE 91/1]
 gi|262164339|ref|ZP_06032077.1| LSU ribosomal protein L35p [Vibrio mimicus VM223]
 gi|262168210|ref|ZP_06035908.1| LSU ribosomal protein L35p [Vibrio cholerae RC27]
 gi|262173544|ref|ZP_06041221.1| LSU ribosomal protein L35p [Vibrio mimicus MB-451]
 gi|262403448|ref|ZP_06080006.1| LSU ribosomal protein L35p [Vibrio sp. RC586]
 gi|297579608|ref|ZP_06941535.1| ribosomal protein L35 [Vibrio cholerae RC385]
 gi|298500135|ref|ZP_07009941.1| LSU ribosomal protein L35 [Vibrio cholerae MAK 757]
 gi|7674313|sp|O68845|RL35_VIBCH RecName: Full=50S ribosomal protein L35
 gi|172047341|sp|A5EZ16|RL35_VIBC3 RecName: Full=50S ribosomal protein L35
 gi|254803582|sp|C3LUW0|RL35_VIBCM RecName: Full=50S ribosomal protein L35
 gi|5825615|gb|AAD53321.1|AF179591_3 ribosomal protein L35 [Vibrio cholerae]
 gi|3095163|gb|AAC38422.1| ribosomal protein L35 [Vibrio cholerae]
 gi|9657686|gb|AAF96197.1| ribosomal protein L35 [Vibrio cholerae O1 biovar El Tor str.
          N16961]
 gi|121546271|gb|EAX56567.1| ribosomal protein L35 [Vibrio cholerae 2740-80]
 gi|121628081|gb|EAX60621.1| ribosomal protein L35 [Vibrio cholerae V52]
 gi|124113401|gb|EAY32221.1| ribosomal protein L35 [Vibrio cholerae 1587]
 gi|124121206|gb|EAY39949.1| ribosomal protein L35 [Vibrio cholerae MZO-3]
 gi|125621831|gb|EAZ50157.1| ribosomal protein L35 [Vibrio cholerae V51]
 gi|126511968|gb|EAZ74562.1| ribosomal protein L35 [Vibrio cholerae NCTC 8457]
 gi|146314459|gb|ABQ18999.1| ribosomal protein L35 [Vibrio cholerae O395]
 gi|148875499|gb|EDL73634.1| ribosomal protein L35 [Vibrio cholerae 623-39]
 gi|150424964|gb|EDN16741.1| ribosomal protein L35 [Vibrio cholerae AM-19226]
 gi|227011054|gb|ACP07265.1| ribosomal protein L35 [Vibrio cholerae M66-2]
 gi|227014957|gb|ACP11166.1| ribosomal protein L35 [Vibrio cholerae O395]
 gi|229334113|gb|EEN99598.1| LSU ribosomal protein L35p [Vibrio cholerae 12129(1)]
 gi|229336258|gb|EEO01276.1| LSU ribosomal protein L35p [Vibrio cholerae bv. albensis VL426]
 gi|229340179|gb|EEO05187.1| LSU ribosomal protein L35p [Vibrio cholerae TM 11079-80]
 gi|229345258|gb|EEO10231.1| LSU ribosomal protein L35p [Vibrio cholerae RC9]
 gi|229348741|gb|EEO13699.1| LSU ribosomal protein L35p [Vibrio cholerae TMA 21]
 gi|229353092|gb|EEO18032.1| LSU ribosomal protein L35p [Vibrio cholerae B33]
 gi|229356908|gb|EEO21826.1| LSU ribosomal protein L35p [Vibrio cholerae BX 330286]
 gi|229372522|gb|ACQ62944.1| LSU ribosomal protein L35p [Vibrio cholerae MJ-1236]
 gi|255735666|gb|EET91064.1| LSU ribosomal protein L35p [Vibrio cholera CIRS 101]
 gi|260837855|gb|EEX64532.1| LSU ribosomal protein L35p [Vibrio sp. RC341]
 gi|261890902|gb|EEY36889.1| LSU ribosomal protein L35p [Vibrio mimicus MB-451]
 gi|262023453|gb|EEY42156.1| LSU ribosomal protein L35p [Vibrio cholerae RC27]
 gi|262026719|gb|EEY45386.1| LSU ribosomal protein L35p [Vibrio mimicus VM223]
 gi|262028098|gb|EEY46757.1| LSU ribosomal protein L35p [Vibrio cholerae INDRE 91/1]
 gi|262349952|gb|EEY99087.1| LSU ribosomal protein L35p [Vibrio sp. RC586]
 gi|297535254|gb|EFH74088.1| ribosomal protein L35 [Vibrio cholerae RC385]
 gi|297542116|gb|EFH78167.1| LSU ribosomal protein L35 [Vibrio cholerae MAK 757]
 gi|327485487|gb|AEA79893.1| LSU ribosomal protein L35p [Vibrio cholerae LMA3894-4]
 gi|327485492|gb|AEA79898.1| LSU ribosomal protein L35p [Vibrio cholerae LMA3894-4]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVAR 59


>gi|302670149|ref|YP_003830109.1| ribosomal protein L35 RpmI [Butyrivibrio proteoclasticus B316]
 gi|302394622|gb|ADL33527.1| ribosomal protein L35 RpmI [Butyrivibrio proteoclasticus B316]
          Length = 66

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  ++ KRF +T TGK+    A KRH + K+S K  RN R   ++ + +  K +++ 
Sbjct: 4  KMKTKRAAAKRFKVTGTGKLMRNKAYKRHILTKKSTKRKRNLRHAGLVDATNV-KAMKSI 62

Query: 63 LP 64
          LP
Sbjct: 63 LP 64


>gi|154500001|ref|ZP_02038039.1| hypothetical protein BACCAP_03658 [Bacteroides capillosus ATCC
          29799]
 gi|150271599|gb|EDM98856.1| hypothetical protein BACCAP_03658 [Bacteroides capillosus ATCC
          29799]
          Length = 67

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT+S +KKRF++T +GKV+   A K H ++    K  +  RG    A AD
Sbjct: 1  MPKLKTHSGAKKRFNLTKSGKVKRAHAFKSH-LLNGHGKDTKRKRGLRAGAYAD 53


>gi|298530060|ref|ZP_07017462.1| ribosomal protein L35 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509434|gb|EFI33338.1| ribosomal protein L35 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 66

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRFSIT +GKV+ +   KRH + K++ K  R      ++  A+   V R
Sbjct: 1  MPKIKTRRCAAKRFSITGSGKVKRRQQNKRHILTKKNAKRKRRLGKPAIVDKANMSSVKR 60

Query: 61 NYLPNGI 67
            LP+  
Sbjct: 61 -MLPHAF 66


>gi|225181659|ref|ZP_03735099.1| ribosomal protein L35 [Dethiobacter alkaliphilus AHT 1]
 gi|225167640|gb|EEG76451.1| ribosomal protein L35 [Dethiobacter alkaliphilus AHT 1]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S + KRF  T +GK +   A   H + K++ K  R  R   V+ +A+ K++
Sbjct: 1  MPKMKTHSGAAKRFKKTGSGKYKRSRANHSHILEKKAPKRKRRLRKNSVVCAAETKRL 58


>gi|237737797|ref|ZP_04568278.1| LSU ribosomal protein L35P [Fusobacterium mortiferum ATCC 9817]
 gi|229419677|gb|EEO34724.1| LSU ribosomal protein L35P [Fusobacterium mortiferum ATCC 9817]
          Length = 68

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  ++KR  +T TGK   + +GK H + K+  K   N +   V+     +  ++
Sbjct: 1  MPKMKTHRGARKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNNLKKDFVVTETLTRH-MQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 ALLPYGV 66


>gi|289208099|ref|YP_003460165.1| ribosomal protein L35 [Thioalkalivibrio sp. K90mix]
 gi|288943730|gb|ADC71429.1| ribosomal protein L35 [Thioalkalivibrio sp. K90mix]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF+ T +GK +   + + H + K+S K  R  R   ++  AD    +R
Sbjct: 1  MPKIKTNRGAAKRFTRTGSGKFKRFQSHRSHILTKKSTKRKRQLRSPAMVHEADV-AAVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KMLP 63


>gi|149371734|ref|ZP_01891150.1| 50S ribosomal protein L35 [unidentified eubacterium SCB49]
 gi|149355361|gb|EDM43921.1| 50S ribosomal protein L35 [unidentified eubacterium SCB49]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK KT SS+KKRF +T TGK++ + A K H
Sbjct: 1  MPKQKTKSSAKKRFKLTGTGKIKRKHAFKSH 31


>gi|330443794|ref|YP_004376780.1| 50S ribosomal protein L35 [Chlamydophila pecorum E58]
 gi|328806904|gb|AEB41077.1| ribosomal protein L35 [Chlamydophila pecorum E58]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMK+N S   RF +T +G ++    GKRH + K+S++  RN
Sbjct: 1  MPKMKSNKSVAARFKVTGSGLLKRNRPGKRHKLSKKSSQAKRN 43


>gi|59711824|ref|YP_204600.1| 50S ribosomal protein L35 [Vibrio fischeri ES114]
 gi|197334823|ref|YP_002156018.1| ribosomal protein L35 [Vibrio fischeri MJ11]
 gi|75507026|sp|Q5E5I4|RL35_VIBF1 RecName: Full=50S ribosomal protein L35
 gi|226725082|sp|B5FDV3|RL35_VIBFM RecName: Full=50S ribosomal protein L35
 gi|59479925|gb|AAW85712.1| 50S ribosomal subunit protein L35 [Vibrio fischeri ES114]
 gi|197316313|gb|ACH65760.1| ribosomal protein L35 [Vibrio fischeri MJ11]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNSLLPKCEVAAVAR 59


>gi|269102904|ref|ZP_06155601.1| LSU ribosomal protein L35p [Photobacterium damselae subsp.
          damselae CIP 102761]
 gi|268162802|gb|EEZ41298.1| LSU ribosomal protein L35p [Photobacterium damselae subsp.
          damselae CIP 102761]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  T  G  + + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKSNKGAAKRFKKTGGG-FKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVVR 59


>gi|145589016|ref|YP_001155613.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          asymbioticus QLW-P1DMWA-1]
 gi|189042778|sp|A4SX35|RL35_POLSQ RecName: Full=50S ribosomal protein L35
 gi|145047422|gb|ABP34049.1| LSU ribosomal protein L35P [Polynucleobacter necessarius subsp.
          asymbioticus QLW-P1DMWA-1]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+KKRF++ A G ++   A KRH + K++ K  R+ RG+  +A AD K  IR
Sbjct: 1  MPKMKSKSSAKKRFTVRAGGTIKRGQAFKRHILTKKTTKNKRHLRGSTEVAKADVKS-IR 59

Query: 61 NYLP 64
          + LP
Sbjct: 60 SMLP 63


>gi|222056445|ref|YP_002538807.1| ribosomal protein L35 [Geobacter sp. FRC-32]
 gi|254802453|sp|B9M522|RL35_GEOSF RecName: Full=50S ribosomal protein L35
 gi|221565734|gb|ACM21706.1| ribosomal protein L35 [Geobacter sp. FRC-32]
          Length = 65

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++ + D K +
Sbjct: 1  MPKIKTHRGAAKRFSKTGTGKIKRSHAFTSHILTSKTRKNKRNLRKGAIVEAVDHKNI 58


>gi|254850512|ref|ZP_05239862.1| ribosomal protein L35 [Vibrio cholerae MO10]
 gi|258623266|ref|ZP_05718273.1| Ribosomal protein L35 [Vibrio mimicus VM573]
 gi|258625493|ref|ZP_05720385.1| Ribosomal protein L35 [Vibrio mimicus VM603]
 gi|254846217|gb|EET24631.1| ribosomal protein L35 [Vibrio cholerae MO10]
 gi|258582199|gb|EEW07056.1| Ribosomal protein L35 [Vibrio mimicus VM603]
 gi|258584452|gb|EEW09194.1| Ribosomal protein L35 [Vibrio mimicus VM573]
          Length = 88

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 25 MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVAR 83


>gi|52081388|ref|YP_080179.1| 50S ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|52786764|ref|YP_092593.1| 50S ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|319647296|ref|ZP_08001518.1| 50S ribosomal protein L35 [Bacillus sp. BT1B_CT2]
 gi|81690940|sp|Q65GB4|RL35_BACLD RecName: Full=50S ribosomal protein L35
 gi|52004599|gb|AAU24541.1| ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|52349266|gb|AAU41900.1| RpmI [Bacillus licheniformis ATCC 14580]
 gi|317390643|gb|EFV71448.1| 50S ribosomal protein L35 [Bacillus sp. BT1B_CT2]
          Length = 66

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K+ I+
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKSAVVSAGDFKR-IK 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QQLAN 64


>gi|169634337|ref|YP_001708073.1| 50S ribosomal protein L35 [Acinetobacter baumannii SDF]
 gi|169797152|ref|YP_001714945.1| 50S ribosomal protein L35 [Acinetobacter baumannii AYE]
 gi|184156920|ref|YP_001845259.1| 50S ribosomal protein L35 [Acinetobacter baumannii ACICU]
 gi|213156058|ref|YP_002318103.1| ribosomal protein L35 [Acinetobacter baumannii AB0057]
 gi|215484615|ref|YP_002326850.1| ribosomal protein L35 [Acinetobacter baumannii AB307-0294]
 gi|239500696|ref|ZP_04660006.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB900]
 gi|255320845|ref|ZP_05362019.1| ribosomal protein L35 [Acinetobacter radioresistens SK82]
 gi|260556055|ref|ZP_05828274.1| ribosomal protein L35 [Acinetobacter baumannii ATCC 19606]
 gi|262380261|ref|ZP_06073416.1| ribosomal protein L35 [Acinetobacter radioresistens SH164]
 gi|301345039|ref|ZP_07225780.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB056]
 gi|301510738|ref|ZP_07235975.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB058]
 gi|301596046|ref|ZP_07241054.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB059]
 gi|332856891|ref|ZP_08436300.1| ribosomal protein L35 [Acinetobacter baumannii 6013150]
 gi|332867206|ref|ZP_08437471.1| ribosomal protein L35 [Acinetobacter baumannii 6013113]
 gi|332874003|ref|ZP_08441938.1| ribosomal protein L35 [Acinetobacter baumannii 6014059]
 gi|226712598|sp|B7H000|RL35_ACIB3 RecName: Full=50S ribosomal protein L35
 gi|226712599|sp|B7I693|RL35_ACIB5 RecName: Full=50S ribosomal protein L35
 gi|226712600|sp|B2HTH5|RL35_ACIBC RecName: Full=50S ribosomal protein L35
 gi|226712601|sp|B0VV92|RL35_ACIBS RecName: Full=50S ribosomal protein L35
 gi|226712602|sp|B0V5N7|RL35_ACIBY RecName: Full=50S ribosomal protein L35
 gi|169150079|emb|CAM87973.1| 50S ribosomal protein L35 [Acinetobacter baumannii AYE]
 gi|169153129|emb|CAP02205.1| 50S ribosomal protein L35 [Acinetobacter baumannii]
 gi|183208514|gb|ACC55912.1| putative ribosomal protein L35 [Acinetobacter baumannii ACICU]
 gi|213055218|gb|ACJ40120.1| ribosomal protein L35 [Acinetobacter baumannii AB0057]
 gi|213987111|gb|ACJ57410.1| ribosomal protein L35 [Acinetobacter baumannii AB307-0294]
 gi|255302014|gb|EET81257.1| ribosomal protein L35 [Acinetobacter radioresistens SK82]
 gi|260410110|gb|EEX03409.1| ribosomal protein L35 [Acinetobacter baumannii ATCC 19606]
 gi|262298455|gb|EEY86369.1| ribosomal protein L35 [Acinetobacter radioresistens SH164]
 gi|322506816|gb|ADX02270.1| rpmI [Acinetobacter baumannii 1656-2]
 gi|323516685|gb|ADX91066.1| 50S ribosomal protein L35 [Acinetobacter baumannii TCDC-AB0715]
 gi|332726945|gb|EGJ58450.1| ribosomal protein L35 [Acinetobacter baumannii 6013150]
 gi|332734145|gb|EGJ65277.1| ribosomal protein L35 [Acinetobacter baumannii 6013113]
 gi|332737744|gb|EGJ68636.1| ribosomal protein L35 [Acinetobacter baumannii 6014059]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MAKLKTRRGAAKRFKATANGFKRKQAF-KRHILTKKSAKRIRQLRGCVMVHVSDVASVRR 59


>gi|90417313|ref|ZP_01225239.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2207]
 gi|90330898|gb|EAS46161.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2207]
          Length = 64

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  TA+G  + +   K H + K + K  R  RGT +L +AD  +V R
Sbjct: 1  MPKGKTHSGAAKRFKKTASG-YKHKHQHKSHILTKMTTKRKRQLRGTSILNAADKPRVDR 59


>gi|297569214|ref|YP_003690558.1| ribosomal protein L35 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925129|gb|ADH85939.1| ribosomal protein L35 [Desulfurivibrio alkaliphilus AHT2]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T TGKV  + A   H + K++ K  R  R   ++ + +A   I+
Sbjct: 1  MPKMKTNRGAAKRFKCTGTGKVARRKAFANHILTKKTTKRKRGLRQGAIVDATNAAG-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RILP 63


>gi|119952987|ref|YP_945196.1| 50S ribosomal protein L35 [Borrelia turicatae 91E135]
 gi|254802435|sp|A1QYY4|RL35_BORT9 RecName: Full=50S ribosomal protein L35
 gi|119861758|gb|AAX17526.1| LSU ribosomal protein L35P [Borrelia turicatae 91E135]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT  S+KKR++ T+ GK++ +    RH + K+S+K  R    + +++S + K+ I+
Sbjct: 1  MSKMKTCKSAKKRYAFTSKGKIKYKKQNLRHILTKKSSKRRRKLGKSGLVSSFEVKR-IK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 TLLP 63


>gi|33593559|ref|NP_881203.1| 50S ribosomal protein L35 [Bordetella pertussis Tohama I]
 gi|33597177|ref|NP_884820.1| 50S ribosomal protein L35 [Bordetella parapertussis 12822]
 gi|33601021|ref|NP_888581.1| 50S ribosomal protein L35 [Bordetella bronchiseptica RB50]
 gi|54036295|sp|Q7VVR2|RL35_BORPE RecName: Full=50S ribosomal protein L35
 gi|54036296|sp|Q7W7C9|RL35_BORPA RecName: Full=50S ribosomal protein L35
 gi|54036297|sp|Q7WKR7|RL35_BORBR RecName: Full=50S ribosomal protein L35
 gi|33572915|emb|CAE42851.1| 50s ribosomal protein l35 [Bordetella pertussis Tohama I]
 gi|33573604|emb|CAE37888.1| 50s ribosomal protein l35 [Bordetella parapertussis]
 gi|33575456|emb|CAE32534.1| 50s ribosomal protein l35 [Bordetella bronchiseptica RB50]
 gi|332382966|gb|AEE67813.1| 50S ribosomal protein L35 [Bordetella pertussis CS]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V
Sbjct: 1  MPKMKTKKSAAKRFKVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV 58


>gi|282890616|ref|ZP_06299139.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae
          str. Hall's coccus]
 gi|281499613|gb|EFB41909.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae
          str. Hall's coccus]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT  +   RF +T TGK++    GKRH + K+S K
Sbjct: 1  MPKMKTKKAVAARFKLTGTGKLKRGHPGKRHILTKKSPK 39


>gi|237839807|ref|XP_002369201.1| ribosomal protein L35 domain-containing protein [Toxoplasma gondii
           ME49]
 gi|211966865|gb|EEB02061.1| ribosomal protein L35 domain-containing protein [Toxoplasma gondii
           ME49]
          Length = 483

 Score = 38.1 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK +
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKKYL 460


>gi|24373854|ref|NP_717897.1| 50S ribosomal protein L35 [Shewanella oneidensis MR-1]
 gi|113970294|ref|YP_734087.1| 50S ribosomal protein L35 [Shewanella sp. MR-4]
 gi|114047515|ref|YP_738065.1| 50S ribosomal protein L35 [Shewanella sp. MR-7]
 gi|117920489|ref|YP_869681.1| 50S ribosomal protein L35 [Shewanella sp. ANA-3]
 gi|54036311|sp|Q8EER7|RL35_SHEON RecName: Full=50S ribosomal protein L35
 gi|123029659|sp|Q0HIT7|RL35_SHESM RecName: Full=50S ribosomal protein L35
 gi|123326547|sp|Q0HV47|RL35_SHESR RecName: Full=50S ribosomal protein L35
 gi|166199837|sp|A0KWV6|RL35_SHESA RecName: Full=50S ribosomal protein L35
 gi|24348261|gb|AAN55341.1|AE015671_8 ribosomal protein L35 [Shewanella oneidensis MR-1]
 gi|113884978|gb|ABI39030.1| LSU ribosomal protein L35P [Shewanella sp. MR-4]
 gi|113888957|gb|ABI43008.1| LSU ribosomal protein L35P [Shewanella sp. MR-7]
 gi|117612821|gb|ABK48275.1| LSU ribosomal protein L35P [Shewanella sp. ANA-3]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R   ++A  D   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRNKCLVAKVDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|194335335|ref|YP_002017129.1| ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226725043|sp|B4SB91|RL35_PELPB RecName: Full=50S ribosomal protein L35
 gi|194307812|gb|ACF42512.1| ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T++GK++ +     H + K+++K  R    T +L    AK++ R
Sbjct: 1  MPKMKSHRGACKRFKTTSSGKIKRERMNGSHNLEKKNSKRCRRLHQTALLEGLKAKQIKR 60


>gi|239905699|ref|YP_002952438.1| 50S ribosomal protein L35 [Desulfovibrio magneticus RS-1]
 gi|259647351|sp|C4XL13|RL35_DESMR RecName: Full=50S ribosomal protein L35
 gi|239795563|dbj|BAH74552.1| 50S ribosomal protein L35 [Desulfovibrio magneticus RS-1]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF  T +GK   +    RH + K+S K  R      ++ SA+ K V R
Sbjct: 1  MPKMKTNRSAAKRFGKTGSGKFTRRRQNLRHILTKKSAKRTRRLGQGALVDSANVKAVSR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -LLP 63


>gi|269119784|ref|YP_003307961.1| ribosomal protein L35 [Sebaldella termitidis ATCC 33386]
 gi|268613662|gb|ACZ08030.1| ribosomal protein L35 [Sebaldella termitidis ATCC 33386]
          Length = 68

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT+  +KKR  +T TGK   + +GK H + K+S K
Sbjct: 1  MPKMKTHKGTKKRVKVTGTGKFMLRHSGKSHILTKKSKK 39


>gi|210623617|ref|ZP_03293943.1| hypothetical protein CLOHIR_01893 [Clostridium hiranonis DSM
          13275]
 gi|210153487|gb|EEA84493.1| hypothetical protein CLOHIR_01893 [Clostridium hiranonis DSM
          13275]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KR   T  GK++   A K H + K+S K   N R + +++  DA+++
Sbjct: 1  MPKMKTHRGAAKRLKRTGNGKLKRAKAYKSHILTKKSAKTKMNLRQSTLVSEGDARRI 58


>gi|237744049|ref|ZP_04574530.1| LSU ribosomal protein L35P [Fusobacterium sp. 7_1]
 gi|256028151|ref|ZP_05441985.1| 50S ribosomal protein L35P [Fusobacterium sp. D11]
 gi|260494366|ref|ZP_05814497.1| ribosomal protein L35 [Fusobacterium sp. 3_1_33]
 gi|289766087|ref|ZP_06525465.1| LSU ribosomal protein L35P [Fusobacterium sp. D11]
 gi|229431278|gb|EEO41490.1| LSU ribosomal protein L35P [Fusobacterium sp. 7_1]
 gi|260198512|gb|EEW96028.1| ribosomal protein L35 [Fusobacterium sp. 3_1_33]
 gi|289717642|gb|EFD81654.1| LSU ribosomal protein L35P [Fusobacterium sp. D11]
          Length = 68

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K  +N      + +   KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIIKHSGKSHILTKKDRKR-KNHLKKDAVVNETYKKHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|68535910|ref|YP_250615.1| 50S ribosomal protein L35 [Corynebacterium jeikeium K411]
 gi|260577994|ref|ZP_05845918.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734]
 gi|148840418|sp|Q4JW10|RL35_CORJK RecName: Full=50S ribosomal protein L35
 gi|68263509|emb|CAI36997.1| 50S ribosomal protein L35 [Corynebacterium jeikeium K411]
 gi|258603884|gb|EEW17137.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  I+ +GK+R + A +RH +  + +K  R  +GT  +A AD K++ R
Sbjct: 2  KQKTHKGAAKRIKISGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAPADVKRMKR 59


>gi|222529196|ref|YP_002573078.1| 50S ribosomal protein L35 [Caldicellulosiruptor bescii DSM 6725]
 gi|312127732|ref|YP_003992606.1| 50S ribosomal protein L35 [Caldicellulosiruptor hydrothermalis
          108]
 gi|312793384|ref|YP_004026307.1| 50S ribosomal protein L35 [Caldicellulosiruptor kristjanssonii
          177R1B]
 gi|312877041|ref|ZP_07737014.1| ribosomal protein L35 [Caldicellulosiruptor lactoaceticus 6A]
 gi|254802427|sp|B9MRK1|RL35_ANATD RecName: Full=50S ribosomal protein L35
 gi|222456043|gb|ACM60305.1| ribosomal protein L35 [Caldicellulosiruptor bescii DSM 6725]
 gi|311777751|gb|ADQ07237.1| ribosomal protein L35 [Caldicellulosiruptor hydrothermalis 108]
 gi|311796182|gb|EFR12538.1| ribosomal protein L35 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312180524|gb|ADQ40694.1| ribosomal protein L35 [Caldicellulosiruptor kristjanssonii
          177R1B]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+V+ + +  K ++
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKSRKRKRNLKKTVVVDATNV-KAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|325109128|ref|YP_004270196.1| 50S ribosomal protein L35 [Planctomyces brasiliensis DSM 5305]
 gi|324969396|gb|ADY60174.1| 50S ribosomal protein L35 [Planctomyces brasiliensis DSM 5305]
          Length = 143

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK KT+   +KRF ITA+GK + + A + H + K++    R  RG  V+    A K+  
Sbjct: 78  MPKQKTHKGMQKRFKITASGKAKHRKANRGHILGKKTGDRKRRLRGDGVVTGTVADKIAD 137

Query: 61  NYLPN 65
              P 
Sbjct: 138 ALRPG 142


>gi|260770315|ref|ZP_05879248.1| LSU ribosomal protein L35p [Vibrio furnissii CIP 102972]
 gi|260615653|gb|EEX40839.1| LSU ribosomal protein L35p [Vibrio furnissii CIP 102972]
 gi|315181384|gb|ADT88297.1| large subunit ribosomal protein L35 [Vibrio furnissii NCTC 11218]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   ++R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNSILPKCEVAGIVR 59


>gi|225028458|ref|ZP_03717650.1| hypothetical protein EUBHAL_02732 [Eubacterium hallii DSM 3353]
 gi|224954208|gb|EEG35417.1| hypothetical protein EUBHAL_02732 [Eubacterium hallii DSM 3353]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPKMKT+ ++ KRF  T +GK++   A K H + K+S K  RN R   +  + + K  K 
Sbjct: 1  MPKMKTSRAAAKRFKKTGSGKLKRNKAYKSHILTKKSQKRKRNLRKAAMTDATNVKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|226954302|ref|ZP_03824766.1| 50S ribosomal protein L35 [Acinetobacter sp. ATCC 27244]
 gi|262374313|ref|ZP_06067589.1| ribosomal protein L35 [Acinetobacter junii SH205]
 gi|294649371|ref|ZP_06726802.1| 50S ribosomal protein L35 [Acinetobacter haemolyticus ATCC 19194]
 gi|226834973|gb|EEH67356.1| 50S ribosomal protein L35 [Acinetobacter sp. ATCC 27244]
 gi|262310871|gb|EEY91959.1| ribosomal protein L35 [Acinetobacter junii SH205]
 gi|292824741|gb|EFF83513.1| 50S ribosomal protein L35 [Acinetobacter haemolyticus ATCC 19194]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M K+KT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++  +D   V
Sbjct: 1  MAKLKTRRGAAKRFKATANGFKRKQAF-KRHILTKKSAKRIRQLRGCVMVHVSDVASV 57


>gi|16079938|ref|NP_390764.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|221310828|ref|ZP_03592675.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|221315153|ref|ZP_03596958.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          NCIB 3610]
 gi|221320071|ref|ZP_03601365.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          JH642]
 gi|221324353|ref|ZP_03605647.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          SMY]
 gi|296331562|ref|ZP_06874031.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305675479|ref|YP_003867151.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          str. W23]
 gi|321312420|ref|YP_004204707.1| 50S ribosomal protein L35 [Bacillus subtilis BSn5]
 gi|2500336|sp|P55874|RL35_BACSU RecName: Full=50S ribosomal protein L35
 gi|1770008|emb|CAA99617.1| ribosomal protein L35 [Bacillus subtilis]
 gi|2635351|emb|CAB14846.1| ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|291485320|dbj|BAI86395.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. natto
          BEST195]
 gi|296151157|gb|EFG92037.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305413723|gb|ADM38842.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          str. W23]
 gi|320018694|gb|ADV93680.1| 50S ribosomal protein L35 [Bacillus subtilis BSn5]
          Length = 66

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K+ I+
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKSAVVSAGDFKR-IK 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLAN 64


>gi|188997587|ref|YP_001931838.1| ribosomal protein L35 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226725074|sp|B2V6V2|RL35_SULSY RecName: Full=50S ribosomal protein L35
 gi|188932654|gb|ACD67284.1| ribosomal protein L35 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 68

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN ++ KR  ITATGKV+    G  H   K+S+K  R  R    +      KV +  
Sbjct: 5  KMKTNRTAAKRLKITATGKVKYTKGGVSHYNTKKSSKRKRQGRKPQYVPKNLEHKV-KAL 63

Query: 63 LPNGI 67
          LPN +
Sbjct: 64 LPNDV 68


>gi|221504775|gb|EEE30440.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 483

 Score = 38.1 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK +
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKKYL 460


>gi|221484581|gb|EEE22875.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 483

 Score = 38.1 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK +
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKKYL 460


>gi|50086060|ref|YP_047570.1| 50S ribosomal protein L35 [Acinetobacter sp. ADP1]
 gi|260551937|ref|ZP_05825799.1| 50S ribosomal protein L35 [Acinetobacter sp. RUH2624]
 gi|293610411|ref|ZP_06692712.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|54036255|sp|Q6F867|RL35_ACIAD RecName: Full=50S ribosomal protein L35
 gi|49532036|emb|CAG69748.1| 50S ribosomal protein L35 [Acinetobacter sp. ADP1]
 gi|260405340|gb|EEW98835.1| 50S ribosomal protein L35 [Acinetobacter sp. RUH2624]
 gi|292827643|gb|EFF86007.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124567|gb|ADY84090.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus PHEA-2]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MAKLKTRRGAAKRFKATANGFKRKQAF-KRHILTKKSAKRIRQLRGCVMVHVSDMNSVRR 59


>gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P [Fusobacterium nucleatum subsp.
          nucleatum ATCC 25586]
 gi|34764974|ref|ZP_00145301.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
 gi|237739651|ref|ZP_04570132.1| LSU ribosomal protein L35P [Fusobacterium sp. 2_1_31]
 gi|237742397|ref|ZP_04572878.1| LSU ribosomal protein L35P [Fusobacterium sp. 4_1_13]
 gi|256845725|ref|ZP_05551183.1| ribosomal protein L35 [Fusobacterium sp. 3_1_36A2]
 gi|262066669|ref|ZP_06026281.1| ribosomal protein L35 [Fusobacterium periodonticum ATCC 33693]
 gi|294783292|ref|ZP_06748616.1| ribosomal protein L35 [Fusobacterium sp. 1_1_41FAA]
 gi|294785029|ref|ZP_06750317.1| ribosomal protein L35 [Fusobacterium sp. 3_1_27]
 gi|296327260|ref|ZP_06869815.1| 50S ribosomal protein L35 [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
 gi|118573008|sp|Q8RGH1|RL35_FUSNN RecName: Full=50S ribosomal protein L35
 gi|19713789|gb|AAL94530.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          nucleatum ATCC 25586]
 gi|27885686|gb|EAA23101.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
 gi|229423259|gb|EEO38306.1| LSU ribosomal protein L35P [Fusobacterium sp. 2_1_31]
 gi|229430045|gb|EEO40257.1| LSU ribosomal protein L35P [Fusobacterium sp. 4_1_13]
 gi|256719284|gb|EEU32839.1| ribosomal protein L35 [Fusobacterium sp. 3_1_36A2]
 gi|291379628|gb|EFE87146.1| ribosomal protein L35 [Fusobacterium periodonticum ATCC 33693]
 gi|294480170|gb|EFG27947.1| ribosomal protein L35 [Fusobacterium sp. 1_1_41FAA]
 gi|294486743|gb|EFG34105.1| ribosomal protein L35 [Fusobacterium sp. 3_1_27]
 gi|296155617|gb|EFG96379.1| 50S ribosomal protein L35 [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
          Length = 68

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +   V+     K+ ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNHLKKDAVVTET-YKRHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|225873836|ref|YP_002755295.1| ribosomal protein L35 [Acidobacterium capsulatum ATCC 51196]
 gi|254802249|sp|C1FA53|RL35_ACIC5 RecName: Full=50S ribosomal protein L35
 gi|225792153|gb|ACO32243.1| ribosomal protein L35 [Acidobacterium capsulatum ATCC 51196]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   +  RH +  +  K  R    +  ++ AD  KV R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIKRGQSKMRHILTSKETKTKRKLTASAYVSDADHAKVAR 60


>gi|218134266|ref|ZP_03463070.1| hypothetical protein BACPEC_02159 [Bacteroides pectinophilus ATCC
          43243]
 gi|217991641|gb|EEC57647.1| hypothetical protein BACPEC_02159 [Bacteroides pectinophilus ATCC
          43243]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TG+++   A K H + K++ K  RN R +  L  A   K ++
Sbjct: 1  MPKVKTKRAAAKRFKKTGTGELKRMKAYKSHILTKKTTKRKRNLRHS-TLTDATNVKTMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|310827808|ref|YP_003960165.1| ribosomal protein L35 [Eubacterium limosum KIST612]
 gi|308739542|gb|ADO37202.1| ribosomal protein L35 [Eubacterium limosum KIST612]
          Length = 64

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++  + KRF +  +G ++   A K H + K+S K  RN R    L  +DAK V
Sbjct: 1  MPKMKSHRGAAKRFKVKKSGVIKRAKAYKSHILNKKSQKRKRNLRKAGYLVPSDAKVV 58


>gi|53805115|ref|YP_113205.1| 50S ribosomal protein L35 [Methylococcus capsulatus str. Bath]
 gi|81682703|sp|Q60AZ2|RL35_METCA RecName: Full=50S ribosomal protein L35
 gi|53758876|gb|AAU93167.1| ribosomal protein L35 [Methylococcus capsulatus str. Bath]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +G  +   + +RH + K+S K  R  R   ++  +D + V R
Sbjct: 1  MPKIKTNRGAAKRFKRTGSGGFKCVQSHRRHILTKKSTKRKRQLRSPDMVHPSDVRAVAR 60


>gi|148264670|ref|YP_001231376.1| 50S ribosomal protein L35 [Geobacter uraniireducens Rf4]
 gi|189042771|sp|A5G4T5|RL35_GEOUR RecName: Full=50S ribosomal protein L35
 gi|146398170|gb|ABQ26803.1| LSU ribosomal protein L35P [Geobacter uraniireducens Rf4]
          Length = 65

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+  + KRF  T TGK++   A   H +  ++ K  RN R   ++A+ D K +
Sbjct: 1  MPKIKTHRGAAKRFRKTGTGKIKRNHAFTSHILTSKTRKNKRNLRKGAIVAAVDHKNI 58


>gi|312622557|ref|YP_004024170.1| 50S ribosomal protein L35 [Caldicellulosiruptor kronotskyensis
          2002]
 gi|312203024|gb|ADQ46351.1| ribosomal protein L35 [Caldicellulosiruptor kronotskyensis 2002]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+V+ + +  K ++
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRRKAGKSHLLSGKSRKRKRNLKKTVVVDATNV-KAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|160934429|ref|ZP_02081816.1| hypothetical protein CLOLEP_03302 [Clostridium leptum DSM 753]
 gi|156867102|gb|EDO60474.1| hypothetical protein CLOLEP_03302 [Clostridium leptum DSM 753]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ++  GKV    A K H + K++ K  R  R T V    +  +V R
Sbjct: 1  MPKIKTHSGAKKRFKLSKNGKVIRAHANKSHILNKKTTKRKRGLRKTTVADKTNVAQVKR 60


>gi|227548136|ref|ZP_03978185.1| 50S ribosomal protein L35 [Corynebacterium lipophiloflavum DSM
          44291]
 gi|227079798|gb|EEI17761.1| 50S ribosomal protein L35 [Corynebacterium lipophiloflavum DSM
          44291]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  I+ +GK+R + AGKRH     S+K  R   GT  +A AD K++ R
Sbjct: 2  KQKTHKGTAKRIKISGSGKLRREQAGKRHLNEGLSSKRRRKLSGTTDVAPADVKRMKR 59


>gi|157375259|ref|YP_001473859.1| 50S ribosomal protein L35 [Shewanella sediminis HAW-EB3]
 gi|189042789|sp|A8FV58|RL35_SHESH RecName: Full=50S ribosomal protein L35
 gi|157317633|gb|ABV36731.1| ribosomal protein L35 [Shewanella sediminis HAW-EB3]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R QA   RH + K+S K  R+ R    +A +D   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANGFKRKQAHL-RHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 Q-LP 62


>gi|51892230|ref|YP_074921.1| 50S ribosomal protein L35 [Symbiobacterium thermophilum IAM
          14863]
 gi|81692145|sp|Q67QG6|RL35_SYMTH RecName: Full=50S ribosomal protein L35
 gi|51855919|dbj|BAD40077.1| 50S ribosomal protein L35 [Symbiobacterium thermophilum IAM
          14863]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF +T +G V+   + K H    +    IR  +  +VL S   +K IR
Sbjct: 1  MPKMKSHRGAAKRFKLTGSGLVKHYPSNKHHKNTHKKENRIRALKRNLVL-SKSFQKNIR 59

Query: 61 NYLPN 65
            LP+
Sbjct: 60 EILPH 64


>gi|311069381|ref|YP_003974304.1| 50S ribosomal protein L35 [Bacillus atrophaeus 1942]
 gi|310869898|gb|ADP33373.1| 50S ribosomal protein L35 [Bacillus atrophaeus 1942]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K+ I+
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKSAVVSAGDFKR-IK 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLAN 64


>gi|212635269|ref|YP_002311794.1| 50S ribosomal protein L35 [Shewanella piezotolerans WP3]
 gi|212556753|gb|ACJ29207.1| Ribosomal protein L35 [Shewanella piezotolerans WP3]
          Length = 72

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  R Q A  RH + K+S K  R+ R    +A +D   + R
Sbjct: 9  MPKMKTDKGVAKRFKKTANGFKRKQ-AHLRHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 67

Query: 61 NYLP 64
            LP
Sbjct: 68 Q-LP 70


>gi|28378230|ref|NP_785122.1| ribosomal protein L35 [Lactobacillus plantarum WCFS1]
 gi|254556437|ref|YP_003062854.1| ribosomal protein L35 [Lactobacillus plantarum JDM1]
 gi|300767161|ref|ZP_07077073.1| 50S ribosomal protein L35 [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308180381|ref|YP_003924509.1| ribosomal protein L35 [Lactobacillus plantarum subsp. plantarum
          ST-III]
 gi|38258529|sp|Q88WU7|RL35_LACPL RecName: Full=50S ribosomal protein L35
 gi|28271065|emb|CAD63970.1| ribosomal protein L35 [Lactobacillus plantarum WCFS1]
 gi|254045364|gb|ACT62157.1| ribosomal protein L35 [Lactobacillus plantarum JDM1]
 gi|300494980|gb|EFK30136.1| 50S ribosomal protein L35 [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308045872|gb|ADN98415.1| ribosomal protein L35 [Lactobacillus plantarum subsp. plantarum
          ST-III]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPK KTN ++ KRF +TA GK+++  A   H    ++ K  R  RGT ++
Sbjct: 1  MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAII 50


>gi|302035782|ref|YP_003796104.1| 50S ribosomal protein L35 [Candidatus Nitrospira defluvii]
 gi|300603846|emb|CBK40178.1| 50S ribosomal protein L35 [Candidatus Nitrospira defluvii]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASA 53
          KMKT+S +KKRF  T TGK+  + AG RH +  +     RN +G + ++SA
Sbjct: 4  KMKTHSGAKKRFRRTGTGKLVRRKAGGRHLLTGKPRDRKRNLKGAVEVSSA 54


>gi|260777879|ref|ZP_05886772.1| LSU ribosomal protein L35p [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605892|gb|EEX32177.1| LSU ribosomal protein L35p [Vibrio coralliilyticus ATCC BAA-450]
          Length = 50

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLA 51
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L+
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILS 50


>gi|325287303|ref|YP_004263093.1| 50S ribosomal protein L35 [Cellulophaga lytica DSM 7489]
 gi|324322757|gb|ADY30222.1| 50S ribosomal protein L35 [Cellulophaga lytica DSM 7489]
          Length = 62

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MKT SS+KKRF +T TGK++ + A K H + K+S K
Sbjct: 1  MKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKK 36


>gi|27365718|ref|NP_761246.1| 50S ribosomal protein L35 [Vibrio vulnificus CMCP6]
 gi|161486622|ref|NP_934736.2| 50S ribosomal protein L35 [Vibrio vulnificus YJ016]
 gi|320156124|ref|YP_004188503.1| 50S ribosomal protein L35p [Vibrio vulnificus MO6-24/O]
 gi|31340360|sp|Q8DA11|RL35_VIBVU RecName: Full=50S ribosomal protein L35
 gi|54036281|sp|Q7MK67|RL35_VIBVY RecName: Full=50S ribosomal protein L35
 gi|27361867|gb|AAO10773.1| ribosomal protein L35 [Vibrio vulnificus CMCP6]
 gi|319931436|gb|ADV86300.1| LSU ribosomal protein L35p [Vibrio vulnificus MO6-24/O]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSLLPRCEVAAVAR 59


>gi|260907210|ref|ZP_05915532.1| ribosomal protein L35 [Brevibacterium linens BL2]
          Length = 68

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 28/54 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK KTNSS+KKR  +T TGK+  +    +H    +S+   R      VL   D
Sbjct: 1  MPKQKTNSSAKKRMRVTGTGKIMREGVNNQHKFEGKSSARKRRVAEDQVLTGGD 54


>gi|56421252|ref|YP_148570.1| 50S ribosomal protein L35 [Geobacillus kaustophilus HTA426]
 gi|261418268|ref|YP_003251950.1| 50S ribosomal protein L35 [Geobacillus sp. Y412MC61]
 gi|297529122|ref|YP_003670397.1| ribosomal protein L35 [Geobacillus sp. C56-T3]
 gi|319767772|ref|YP_004133273.1| ribosomal protein L35 [Geobacillus sp. Y412MC52]
 gi|132914|sp|P13069|RL35_BACST RecName: Full=50S ribosomal protein L35
 gi|81675732|sp|Q5KWD4|RL35_GEOKA RecName: Full=50S ribosomal protein L35
 gi|39962|emb|CAA34313.1| unnamed protein product [Geobacillus stearothermophilus]
 gi|56381094|dbj|BAD77002.1| 50S ribosomal protein L35 [Geobacillus kaustophilus HTA426]
 gi|261374725|gb|ACX77468.1| ribosomal protein L35 [Geobacillus sp. Y412MC61]
 gi|297252374|gb|ADI25820.1| ribosomal protein L35 [Geobacillus sp. C56-T3]
 gi|317112638|gb|ADU95130.1| ribosomal protein L35 [Geobacillus sp. Y412MC52]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  TA+GK++   A   H    ++ K  R+ R   +++  D K+ IR
Sbjct: 1  MPKMKTHRGSAKRFKKTASGKLKRGHAYTSHLFANKTKKQKRHLRKATLVSPGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|108804141|ref|YP_644078.1| 50S ribosomal protein L35P [Rubrobacter xylanophilus DSM 9941]
 gi|124079017|sp|Q1AWG2|RL35_RUBXD RecName: Full=50S ribosomal protein L35
 gi|108765384|gb|ABG04266.1| LSU ribosomal protein L35P [Rubrobacter xylanophilus DSM 9941]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +  RF +   GK+R + AG  H + K+++K  R       +  AD K+V R
Sbjct: 1  MPKMKTHKGAAGRFEVMKRGKLRRRRAGHNHILEKKTSKRKRRLNTETYVNPADEKRVRR 60


>gi|308049559|ref|YP_003913125.1| 50S ribosomal protein L35P [Ferrimonas balearica DSM 9799]
 gi|307631749|gb|ADN76051.1| LSU ribosomal protein L35P [Ferrimonas balearica DSM 9799]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+G  + + +  RH + K+S K  R+ R   ++A  D   V R
Sbjct: 1  MPKMKSHRGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRAAAMVAKVDVASVQR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -MLP 63


>gi|90410625|ref|ZP_01218641.1| 50S ribosomal protein L35 [Photobacterium profundum 3TCK]
 gi|90328866|gb|EAS45150.1| 50S ribosomal protein L35 [Photobacterium profundum 3TCK]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59


>gi|212704420|ref|ZP_03312548.1| hypothetical protein DESPIG_02475 [Desulfovibrio piger ATCC
          29098]
 gi|212672141|gb|EEB32624.1| hypothetical protein DESPIG_02475 [Desulfovibrio piger ATCC
          29098]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPK+KT  S+ KRF +T +GK + +    RH + K++    R  R G   +     +K +
Sbjct: 1  MPKIKTRRSAAKRFELTGSGKFKRRRQNLRHILTKKAPG--RKMRLGQAAIVDRTNEKAV 58

Query: 60 RNYLPNG 66
          R  LPNG
Sbjct: 59 RRMLPNG 65


>gi|37198873|dbj|BAC94707.1| ribosomal protein L35 [Vibrio vulnificus YJ016]
          Length = 88

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 25 MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSLLPRCEVAAVAR 83


>gi|220903766|ref|YP_002479078.1| 50S ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|254802447|sp|B8J4E2|RL35_DESDA RecName: Full=50S ribosomal protein L35
 gi|219868065|gb|ACL48400.1| ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 65

 Score = 37.7 bits (86), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKR-SNKFIRNARGTMVLASADAKKVI 59
          MPK+KT  S+ KRFS T +GK + +    RH + K+ +++ +R  + T V  + +  K +
Sbjct: 1  MPKIKTRRSAAKRFSQTGSGKFKRRRQNLRHILTKKAASRKMRLGQSTTVDKANE--KAV 58

Query: 60 RNYLPNG 66
          R  LPNG
Sbjct: 59 RRMLPNG 65


>gi|255625911|gb|ACU13300.1| unknown [Glycine max]
          Length = 147

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K
Sbjct: 78  KMKTHKASAKRFRVTGRGKIVCRRAGKQHLLVKKNTK 114


>gi|212638372|ref|YP_002314892.1| 50S ribosomal protein L35 [Anoxybacillus flavithermus WK1]
 gi|226713816|sp|B7GGV1|RL35_ANOFW RecName: Full=50S ribosomal protein L35
 gi|212559852|gb|ACJ32907.1| Ribosomal protein L35 [Anoxybacillus flavithermus WK1]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TG+++   A   H    ++ K  R  R   +++  D K+ IR
Sbjct: 1  MPKMKTHKGSAKRFKKTGTGQLKRSHAFTSHLFANKTQKQKRKLRKATLVSKGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QLLDN 64


>gi|162447700|ref|YP_001620832.1| 50S ribosomal protein L35 [Acholeplasma laidlawii PG-8A]
 gi|189042754|sp|A9NGH6|RL35_ACHLI RecName: Full=50S ribosomal protein L35
 gi|161985807|gb|ABX81456.1| large subunit ribosomal protein L35 [Acholeplasma laidlawii
          PG-8A]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S  KKR  ITATGK+    A   H    ++ K  R       + + DAK++ R
Sbjct: 1  MPKQKTHSGLKKRIKITATGKLMRHQAYSNHLAASKTTKQNRQLSAETTVHATDAKRIKR 60


>gi|78189669|ref|YP_380007.1| 50S ribosomal protein L35 [Chlorobium chlorochromatii CaD3]
 gi|148840413|sp|Q3APW1|RL35_CHLCH RecName: Full=50S ribosomal protein L35
 gi|78171868|gb|ABB28964.1| LSU ribosomal protein L35P [Chlorobium chlorochromatii CaD3]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++  + KRF +TA+GK++ +     H + K++ K  R    + +L    AK++
Sbjct: 1  MPKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQI 58


>gi|89094705|ref|ZP_01167641.1| ribosomal protein L35 [Oceanospirillum sp. MED92]
 gi|89081051|gb|EAR60287.1| ribosomal protein L35 [Oceanospirillum sp. MED92]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRF  TA G  + + +   H + K+S K  R  R  + + +AD K ++R
Sbjct: 1  MPKMKSNSGAAKRFKKTANG-FKHKQSFTSHILTKKSTKRKRQLRPMLQVHAAD-KALVR 58

Query: 61 NYLP 64
            LP
Sbjct: 59 RMLP 62


>gi|327439267|dbj|BAK15632.1| ribosomal protein L35 [Solibacillus silvestris StLB046]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T TGK++   A   H    +S K  R+ R   V  S D K++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKFDRAYGSHLFANKSTKAKRHLRKAKVATSGDFKRI 58


>gi|300933424|ref|ZP_07148680.1| 50S ribosomal protein L35 [Corynebacterium resistens DSM 45100]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  IT +GK+R + A +RH +  + ++  R  +GT  ++ AD K++ R
Sbjct: 2  KQKTHKGAAKRIKITGSGKLRREQANRRHLLEGKPSRRTRRLKGTEDVSPADTKRMKR 59


>gi|153872753|ref|ZP_02001552.1| Ribosomal protein L35 [Beggiatoa sp. PS]
 gi|152070779|gb|EDN68446.1| Ribosomal protein L35 [Beggiatoa sp. PS]
          Length = 64

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  +A G  R Q+  +RH + K++ K  R  R  M++  AD   ++ 
Sbjct: 1  MPKMKTNRGAAKRFKRSAGGLKRGQSH-RRHILTKKTTKRKRLLRSPMMINKADV-GIVN 58

Query: 61 NYLP 64
            LP
Sbjct: 59 RLLP 62


>gi|138896278|ref|YP_001126731.1| 50S ribosomal protein L35 [Geobacillus thermodenitrificans
          NG80-2]
 gi|166231188|sp|A4IRN2|RL35_GEOTN RecName: Full=50S ribosomal protein L35
 gi|134267791|gb|ABO67986.1| Ribosomal protein L35 [Geobacillus thermodenitrificans NG80-2]
          Length = 66

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  TA+GK++   A   H    ++ K  R+ R   +++  D K+ IR
Sbjct: 1  MPKMKTHRGSAKRFKKTASGKLKRGHAYTSHLFANKTKKQKRHLRKAALVSPGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|297617665|ref|YP_003702824.1| ribosomal protein L35 [Syntrophothermus lipocalidus DSM 12680]
 gi|297145502|gb|ADI02259.1| ribosomal protein L35 [Syntrophothermus lipocalidus DSM 12680]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +G+++   A   H +  +++K  RN R + +++ +D K++  
Sbjct: 1  MPKMKTHRGAAKRFRKTGSGRIKRAKAFHSHLLGGKTSKRKRNLRKSTLVSKSDTKRIA- 59

Query: 61 NYLP 64
          N +P
Sbjct: 60 NLIP 63


>gi|56964453|ref|YP_176184.1| 50S ribosomal protein L35 [Bacillus clausii KSM-K16]
 gi|81678827|sp|Q5WEI7|RL35_BACSK RecName: Full=50S ribosomal protein L35
 gi|56910696|dbj|BAD65223.1| 50S ribosomal protein L35 [Bacillus clausii KSM-K16]
          Length = 67

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T TGK++   A   H    +S K  R  R   ++ S D K++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRSHAYTSHMFRHKSQKQKRKLRKAAIVHSGDFKRI 58


>gi|326336126|ref|ZP_08202298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Capnocytophaga
          sp. oral taxon 338 str. F0234]
 gi|325691635|gb|EGD33602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Capnocytophaga
          sp. oral taxon 338 str. F0234]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK+KT SS+KKRF +T +GK++ + A K H
Sbjct: 1  MPKIKTKSSAKKRFKLTGSGKIKRKHAFKSH 31


>gi|310658434|ref|YP_003936155.1| 50S ribosomal protein L35 [Clostridium sticklandii DSM 519]
 gi|308825212|emb|CBH21250.1| 50S ribosomal subunit protein L35 [Clostridium sticklandii]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+  + KRF +T +GK++   A   H + K+S K  R  R + ++   D
Sbjct: 1  MPKMKTHRGAAKRFKVTGSGKLKRSKAFTSHILTKKSAKTKRKLRQSGIVTKGD 54


>gi|158321004|ref|YP_001513511.1| ribosomal protein L35 [Alkaliphilus oremlandii OhILAs]
 gi|166988030|sp|A8MI83|RL35_ALKOO RecName: Full=50S ribosomal protein L35
 gi|158141203|gb|ABW19515.1| ribosomal protein L35 [Alkaliphilus oremlandii OhILAs]
          Length = 64

 Score = 37.4 bits (85), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T TGK++   A   H + K+S K  R  R   ++   D +++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIKRSKAYTSHILTKKSPKRKRKLRKAGIVFKGDQRRI 58


>gi|157693291|ref|YP_001487753.1| 50S ribosomal protein L35 [Bacillus pumilus SAFR-032]
 gi|194017121|ref|ZP_03055733.1| ribosomal protein L35 [Bacillus pumilus ATCC 7061]
 gi|166988032|sp|A8FG26|RL35_BACP2 RecName: Full=50S ribosomal protein L35
 gi|157682049|gb|ABV63193.1| ribosomal protein L35 [Bacillus pumilus SAFR-032]
 gi|194010989|gb|EDW20559.1| ribosomal protein L35 [Bacillus pumilus ATCC 7061]
          Length = 66

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + ++++ D K+ I+
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKSAIVSAGDFKR-IK 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QQLAN 64


>gi|116491273|ref|YP_810817.1| 50S ribosomal protein L35P [Oenococcus oeni PSU-1]
 gi|118586726|ref|ZP_01544163.1| ribosomal protein L35 [Oenococcus oeni ATCC BAA-1163]
 gi|290890820|ref|ZP_06553887.1| hypothetical protein AWRIB429_1277 [Oenococcus oeni AWRIB429]
 gi|122276545|sp|Q04EH0|RL35_OENOB RecName: Full=50S ribosomal protein L35
 gi|116091998|gb|ABJ57152.1| LSU ribosomal protein L35P [Oenococcus oeni PSU-1]
 gi|118432814|gb|EAV39543.1| ribosomal protein L35 [Oenococcus oeni ATCC BAA-1163]
 gi|290479592|gb|EFD88249.1| hypothetical protein AWRIB429_1277 [Oenococcus oeni AWRIB429]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKTN +S KRF  TA+G  +A  A   H    ++ K  R  RGT ++   + K+
Sbjct: 1  MPKMKTNRASAKRFKKTASGGFKAGQAFTSHRFHGKTKKQRRQLRGTAMMNKVNVKR 57


>gi|126652712|ref|ZP_01724873.1| 50S ribosomal protein L35 [Bacillus sp. B14905]
 gi|169829540|ref|YP_001699698.1| 50S ribosomal protein L35 [Lysinibacillus sphaericus C3-41]
 gi|299535484|ref|ZP_07048806.1| 50S ribosomal protein L35 [Lysinibacillus fusiformis ZC1]
 gi|226725030|sp|B1HWC9|RL35_LYSSC RecName: Full=50S ribosomal protein L35
 gi|126590561|gb|EAZ84679.1| 50S ribosomal protein L35 [Bacillus sp. B14905]
 gi|168994028|gb|ACA41568.1| 50S ribosomal protein L35 [Lysinibacillus sphaericus C3-41]
 gi|298729245|gb|EFI69798.1| 50S ribosomal protein L35 [Lysinibacillus fusiformis ZC1]
          Length = 66

 Score = 37.4 bits (85), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R+ R   +++S D K++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKYDRAYGSHLFANKSTKQKRHLRKANIVSSGDFKRI 58


>gi|260892437|ref|YP_003238534.1| ribosomal protein L35 [Ammonifex degensii KC4]
 gi|260864578|gb|ACX51684.1| ribosomal protein L35 [Ammonifex degensii KC4]
          Length = 66

 Score = 37.4 bits (85), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQA-AGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT+  + KRF  T  GK+ A   +GK H + K++++  R  R   VL   DA + I
Sbjct: 1  MPKVKTHRGAAKRFKKTGKGKIVAYCRSGKSHLLEKKTSQRKRRLRHKKVLQPGDAAQ-I 59

Query: 60 RNYLP 64
          R  +P
Sbjct: 60 RRLIP 64


>gi|290968293|ref|ZP_06559835.1| ribosomal protein L35 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781652|gb|EFD94238.1| ribosomal protein L35 [Megasphaera genomosp. type_1 str. 28L]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF+ T TGKV+     K H +  +S K  RN R    L S    + +R
Sbjct: 1  MPKLKTRRAAAKRFTTTGTGKVKRMKPYKSHILESKSPKRKRNLRKA-TLVSKTMTEAVR 59

Query: 61 NYLP 64
             P
Sbjct: 60 KMCP 63


>gi|317487455|ref|ZP_07946242.1| ribosomal protein L35 [Bilophila wadsworthia 3_1_6]
 gi|316921314|gb|EFV42613.1| ribosomal protein L35 [Bilophila wadsworthia 3_1_6]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPKMKT   + KRFS T TGK + +    RH + K+  K  R  R G   L  A   K +
Sbjct: 1  MPKMKTRRCAAKRFSTTGTGKFKRRRQNLRHILTKKDAK--RKMRLGQGALVDATNVKAV 58

Query: 60 RNYLP 64
          R  +P
Sbjct: 59 RRMMP 63


>gi|213966327|ref|ZP_03394509.1| ribosomal protein L35 [Corynebacterium amycolatum SK46]
 gi|213951033|gb|EEB62433.1| ribosomal protein L35 [Corynebacterium amycolatum SK46]
          Length = 64

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  +A +D K+V R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSTRTRRLKGTTDVAKSDVKRVKR 59


>gi|312135021|ref|YP_004002359.1| 50S ribosomal protein L35 [Caldicellulosiruptor owensensis OL]
 gi|311775072|gb|ADQ04559.1| ribosomal protein L35 [Caldicellulosiruptor owensensis OL]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  ++ K  RN + T+V+ + +  K ++
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKTRKRKRNLKKTVVVDATNV-KAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|289643248|ref|ZP_06475374.1| ribosomal protein L35 [Frankia symbiont of Datisca glomerata]
 gi|289506953|gb|EFD27926.1| ribosomal protein L35 [Frankia symbiont of Datisca glomerata]
          Length = 64

 Score = 37.4 bits (85), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT++ + KRF IT +GKV  + A + H +  +S++  R     + L+ AD  ++
Sbjct: 1  MPKTKTHTGAAKRFRITGSGKVMRRRANRNHLLEHKSSRRTRRLDNEVRLSPADEGRI 58


>gi|227498535|ref|ZP_03928679.1| 50S ribosomal protein L35 [Acidaminococcus sp. D21]
 gi|226903991|gb|EEH89909.1| 50S ribosomal protein L35 [Acidaminococcus sp. D21]
          Length = 65

 Score = 37.4 bits (85), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF  TATG+ +   A + H +  +S    RN R   ++   D ++V
Sbjct: 1  MPKMKTRRSAAKRFKATATGEFKRAKAFRSHILEHKSPTRKRNLRKAALVHKTDHERV 58


>gi|328953978|ref|YP_004371312.1| 50S ribosomal protein L35 [Desulfobacca acetoxidans DSM 11109]
 gi|328454302|gb|AEB10131.1| 50S ribosomal protein L35 [Desulfobacca acetoxidans DSM 11109]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T  G+++   A +RH +  +S+K  R+ R   ++A +  K  ++
Sbjct: 1  MPKIKTHRGAAKRFKLTGGGRLKKTKAFRRHILTSKSSKRKRHLRAPEMVAKSSEKN-LK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|312898390|ref|ZP_07757780.1| ribosomal protein L35 [Megasphaera micronuciformis F0359]
 gi|310620309|gb|EFQ03879.1| ribosomal protein L35 [Megasphaera micronuciformis F0359]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLA 51
          M K+KT S++ KRFS+T +GK +   A K H + K+S K  RN R   ++A
Sbjct: 1  MGKLKTRSAAAKRFSVTGSGKFKRAKAYKSHILEKKSPKRKRNLRKAALVA 51


>gi|299136183|ref|ZP_07029367.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX8]
 gi|298602307|gb|EFI58461.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX8]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLAS-ADAKKVI 59
          MPK+KT+S + KRF  T TGK +   +  RH +  ++ K  ++  G +VL S AD  KV 
Sbjct: 1  MPKLKTHSGAAKRFKKTGTGKFKRGQSKMRHILTSKATK-TKSKLGKIVLVSVADTPKVA 59

Query: 60 RNYLP 64
          R  LP
Sbjct: 60 R-MLP 63


>gi|329904273|ref|ZP_08273745.1| LSU ribosomal protein L35p [Oxalobacteraceae bacterium IMCC9480]
 gi|327548050|gb|EGF32782.1| LSU ribosomal protein L35p [Oxalobacteraceae bacterium IMCC9480]
          Length = 83

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +   G V+  +A KRH + K++ K  R  RG   + + +   V R
Sbjct: 19 MPKMKTKSAAKKRFRVRPGGTVKRGSAFKRHILTKKTTKTKRQLRGAKEVHATNMVSV-R 77

Query: 61 NYLP 64
          + LP
Sbjct: 78 SMLP 81


>gi|189485295|ref|YP_001956236.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
 gi|170287254|dbj|BAG13775.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
          Length = 63

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MK +S +KKRF +T  GKV+ +  G+RH +   S    R AR   ++  +D K
Sbjct: 1  MKQHSGAKKRFKVTGKGKVKYKKPGQRHLLTGDSGNQNRKARKPAIVTKSDMK 53


>gi|163782695|ref|ZP_02177691.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881816|gb|EDP75324.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 66

 Score = 37.0 bits (84), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN S+KKRF +TATGK++    G  H   K+  K  R  R    +   + +K +R+ 
Sbjct: 5  KMKTNRSAKKRFKVTATGKIKRWKGGGSHYNTKKDPKRKRRLRKATYVKE-NMEKHVRDL 63

Query: 63 L 63
          L
Sbjct: 64 L 64


>gi|206889724|ref|YP_002249045.1| ribosomal protein L35 [Thermodesulfovibrio yellowstonii DSM
          11347]
 gi|226725079|sp|B5YLD0|RL35_THEYD RecName: Full=50S ribosomal protein L35
 gi|206741662|gb|ACI20719.1| ribosomal protein L35 [Thermodesulfovibrio yellowstonii DSM
          11347]
          Length = 66

 Score = 37.0 bits (84), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT+  + KRF +T TGK+  + A K H +  + +K  R+ R    +A  D    K 
Sbjct: 1  MPKLKTHRGAAKRFKVTGTGKIMRRRANKSHLLTGKPSKRTRHLRQ---IAQVDETQYKA 57

Query: 59 IRNYLP 64
          IR  +P
Sbjct: 58 IRMLIP 63


>gi|15615701|ref|NP_244005.1| 50S ribosomal protein L35 [Bacillus halodurans C-125]
 gi|20139765|sp|Q9K868|RL35_BACHD RecName: Full=50S ribosomal protein L35
 gi|10175761|dbj|BAB06858.1| 50S ribosomal protein L35 [Bacillus halodurans C-125]
          Length = 66

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R + ++ S D K++
Sbjct: 1  MPKMKTHKGAAKRFKKTGSGKLKRSHAFTSHLFANKSQKQKRKLRKSAIVHSGDFKRI 58


>gi|326500078|dbj|BAJ90874.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326532034|dbj|BAK01393.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326532788|dbj|BAJ89239.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 140

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T TGK+  + AGK+H + K++ K
Sbjct: 71  KMKTHKASAKRFRVTGTGKIVRRCAGKQHLLSKKNAK 107


>gi|154482661|ref|ZP_02025109.1| hypothetical protein EUBVEN_00334 [Eubacterium ventriosum ATCC
          27560]
 gi|149736437|gb|EDM52323.1| hypothetical protein EUBVEN_00334 [Eubacterium ventriosum ATCC
          27560]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK--KV 58
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R      + + K  K 
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSAKRKRNLRKATTTDATNVKNMKK 60

Query: 59 IRNYL 63
          I  YL
Sbjct: 61 ILPYL 65


>gi|322514760|ref|ZP_08067785.1| 50S ribosomal protein L35 [Actinobacillus ureae ATCC 25976]
 gi|322119298|gb|EFX91418.1| 50S ribosomal protein L35 [Actinobacillus ureae ATCC 25976]
          Length = 89

 Score = 37.0 bits (84), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R  +++A AD   V+
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKLMVAKADQVLVV 83


>gi|116492468|ref|YP_804203.1| 50S ribosomal protein L35 [Pediococcus pentosaceus ATCC 25745]
 gi|122266068|sp|Q03GB1|RL35_PEDPA RecName: Full=50S ribosomal protein L35
 gi|116102618|gb|ABJ67761.1| LSU ribosomal protein L35P [Pediococcus pentosaceus ATCC 25745]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++ S + K+ 
Sbjct: 1  MPKMKTNRAAAKRFKKTANGGLKSANAYTSHRFHGKTKKQRRQLRGTDMMDSTNVKRY 58


>gi|283851377|ref|ZP_06368659.1| ribosomal protein L35 [Desulfovibrio sp. FW1012B]
 gi|283573327|gb|EFC21305.1| ribosomal protein L35 [Desulfovibrio sp. FW1012B]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF  T +GK   +    RH + K++ K  R      ++ SA+  K +R
Sbjct: 1  MPKMKTNRSAAKRFGKTGSGKFTRRRQNLRHILTKKNAKRSRRLGQGALVDSANV-KAVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RLLP 63


>gi|223937574|ref|ZP_03629477.1| ribosomal protein L35 [bacterium Ellin514]
 gi|223893737|gb|EEF60195.1| ribosomal protein L35 [bacterium Ellin514]
          Length = 69

 Score = 37.0 bits (84), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 2  PK-MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          PK +KT  S  KRF ITATGKV    AG+RH +  ++ K  RN   +  + S D  ++ +
Sbjct: 4  PKGIKTKKSVAKRFKITATGKVMRSRAGRRHLLASKNAKRRRNLGTSKEVDSTDTYRIKQ 63

Query: 61 NYLP 64
          N LP
Sbjct: 64 N-LP 66


>gi|159904328|ref|YP_001551672.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9211]
 gi|226725049|sp|A9BDA5|RL35_PROM4 RecName: Full=50S ribosomal protein L35
 gi|159889504|gb|ABX09718.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9211]
          Length = 65

 Score = 37.0 bits (84), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T TGK   + A + H +  +S K  R+     V+   DA  V
Sbjct: 1  MPKLKTRKAAAKRFKVTGTGKFMRRRAFRNHLLDHKSTKLKRHLATKAVVDERDADNV 58


>gi|226311195|ref|YP_002771089.1| 50S ribosomal protein L35 [Brevibacillus brevis NBRC 100599]
 gi|254802436|sp|C0Z9B5|RL35_BREBN RecName: Full=50S ribosomal protein L35
 gi|226094143|dbj|BAH42585.1| 50S ribosomal protein L35 [Brevibacillus brevis NBRC 100599]
          Length = 65

 Score = 37.0 bits (84), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN ++ KRF  T +G+++   A   H    +S K  R+ R   +++  D K++
Sbjct: 1  MPKMKTNKAAAKRFKKTGSGQLKRDRAFGSHLFANKSTKAKRHLRKAALVSKGDQKRI 58


>gi|330850843|ref|YP_004376593.1| 50S ribosomal protein L35 [Fistulifera sp. JPCC DA0580]
 gi|328835663|dbj|BAK18959.1| 50S ribosomal protein L35 [Fistulifera sp. JPCC DA0580]
          Length = 64

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KR+ +T TG    + A K H ++ +SN+  R     + ++ +D++K+
Sbjct: 1  MPKLKTRKAAAKRYKVTGTGNFLRRHAYKGHLLMHKSNRQKRKLSQKICVSLSDSRKI 58


>gi|269837201|ref|YP_003319429.1| 50S ribosomal protein L35 [Sphaerobacter thermophilus DSM 20745]
 gi|269786464|gb|ACZ38607.1| ribosomal protein L35 [Sphaerobacter thermophilus DSM 20745]
          Length = 66

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +K+RF I+A GK+  +  G+R  + ++  K    A   MV  +  ++K +R
Sbjct: 1  MPKMKTHSGAKRRFKISAGGKI-MRMHGERSHLRRKKAKRRLRAFDKMVEVAPASRKQLR 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 RLLPYG 65


>gi|148244738|ref|YP_001219432.1| 50S ribosomal protein L35 [Candidatus Vesicomyosocius okutanii
          HA]
 gi|166233050|sp|A5CWF7|RL35_VESOH RecName: Full=50S ribosomal protein L35
 gi|146326565|dbj|BAF61708.1| 50S ribosomal protein L35 [Candidatus Vesicomyosocius okutanii
          HA]
          Length = 65

 Score = 36.6 bits (83), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S    R+ R    +   D   ++R
Sbjct: 1  MPKLKTNKGAAKRFKKTASGGYKCKHSHLRHILTKKSTSRKRSLRAPDSIEKVDI-PMVR 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KMLP 63


>gi|110834701|ref|YP_693560.1| 50S ribosomal protein L35 [Alcanivorax borkumensis SK2]
 gi|254428154|ref|ZP_05041861.1| ribosomal protein L35 [Alcanivorax sp. DG881]
 gi|118572998|sp|Q0VNG0|RL35_ALCBS RecName: Full=50S ribosomal protein L35
 gi|110647812|emb|CAL17288.1| 50S ribosomal protein L35 [Alcanivorax borkumensis SK2]
 gi|196194323|gb|EDX89282.1| ribosomal protein L35 [Alcanivorax sp. DG881]
          Length = 64

 Score = 36.6 bits (83), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  R QA  K H + K+S+K IR  R    +   D   V R
Sbjct: 1  MPKIKTNRGAAKRFKKTASGFKRKQAF-KNHILTKKSSKTIRKLRPKQEVHENDVALVKR 59


>gi|296112356|ref|YP_003626294.1| 50S ribosomal protein L35 [Moraxella catarrhalis RH4]
 gi|295920050|gb|ADG60401.1| 50S ribosomal protein L35 [Moraxella catarrhalis RH4]
 gi|326561864|gb|EGE12199.1| 50S ribosomal protein L35 [Moraxella catarrhalis 7169]
 gi|326563299|gb|EGE13566.1| 50S ribosomal protein L35 [Moraxella catarrhalis 46P47B1]
 gi|326563414|gb|EGE13679.1| 50S ribosomal protein L35 [Moraxella catarrhalis 12P80B1]
 gi|326565953|gb|EGE16114.1| 50S ribosomal protein L35 [Moraxella catarrhalis 103P14B1]
 gi|326568912|gb|EGE18981.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC1]
 gi|326569213|gb|EGE19274.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC7]
 gi|326571886|gb|EGE21891.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC8]
 gi|326575398|gb|EGE25323.1| 50S ribosomal protein L35 [Moraxella catarrhalis 101P30B1]
 gi|326576515|gb|EGE26423.1| 50S ribosomal protein L35 [Moraxella catarrhalis CO72]
 gi|326577984|gb|EGE27848.1| 50S ribosomal protein L35 [Moraxella catarrhalis O35E]
          Length = 63

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT   + KRF  TA G  R QA  KRH + K+S K IR  RG +++ ++D    IR  
Sbjct: 2  KLKTKRGAAKRFKKTANGFKRKQAF-KRHILTKKSPKRIRQLRGCVMVHASDVAS-IRRM 59

Query: 63 LP 64
           P
Sbjct: 60 CP 61


>gi|229543585|ref|ZP_04432645.1| ribosomal protein L35 [Bacillus coagulans 36D1]
 gi|229328005|gb|EEN93680.1| ribosomal protein L35 [Bacillus coagulans 36D1]
          Length = 65

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +G ++   A + H    +  K  R  R + +++ +D K+ IR
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGSLKRSHAYRSHLFANKVTKQKRQLRKSTLVSESDMKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|291295768|ref|YP_003507166.1| 50S ribosomal protein L35 [Meiothermus ruber DSM 1279]
 gi|290470727|gb|ADD28146.1| ribosomal protein L35 [Meiothermus ruber DSM 1279]
          Length = 66

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +K R  ITATGKV  +  GKRH    +S K  R        +  + ++V R
Sbjct: 1  MAKMKTHKGAKGRVKITATGKVVGKKPGKRHLNWHKSGKSRRQKGRDFTFSKGEERRVHR 60


>gi|262275834|ref|ZP_06053643.1| LSU ribosomal protein L35p [Grimontia hollisae CIP 101886]
 gi|262219642|gb|EEY70958.1| LSU ribosomal protein L35p [Grimontia hollisae CIP 101886]
          Length = 64

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  T  G  + + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKANKGAAKRFKKTGGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEIGAVVR 59


>gi|270290436|ref|ZP_06196661.1| 50S ribosomal protein L35 [Pediococcus acidilactici 7_4]
 gi|304384683|ref|ZP_07367029.1| 50S ribosomal protein L35 [Pediococcus acidilactici DSM 20284]
 gi|270281217|gb|EFA27050.1| 50S ribosomal protein L35 [Pediococcus acidilactici 7_4]
 gi|304328877|gb|EFL96097.1| 50S ribosomal protein L35 [Pediococcus acidilactici DSM 20284]
          Length = 66

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++ S + K+ 
Sbjct: 1  MPKMKTNRAAAKRFKKTANGGLKSANAFTSHRFHGKTKKQRRQLRGTDMMDSTNVKRY 58


>gi|255628681|gb|ACU14685.1| unknown [Glycine max]
          Length = 138

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K
Sbjct: 69  KMKTHKASAKRFRVTGQGKIVRRRAGKQHLLVKKNTK 105


>gi|295399482|ref|ZP_06809464.1| ribosomal protein L35 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109959|ref|YP_003988275.1| ribosomal protein L35 [Geobacillus sp. Y4.1MC1]
 gi|294978948|gb|EFG54544.1| ribosomal protein L35 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215060|gb|ADP73664.1| ribosomal protein L35 [Geobacillus sp. Y4.1MC1]
          Length = 66

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H    ++ K  R  R   +++  D K+ IR
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRGHAYTSHLFASKTQKQKRKLRKATLVSPGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QLLDN 64


>gi|254444647|ref|ZP_05058123.1| ribosomal protein L35 [Verrucomicrobiae bacterium DG1235]
 gi|198258955|gb|EDY83263.1| ribosomal protein L35 [Verrucomicrobiae bacterium DG1235]
          Length = 64

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           KT  S  KRF +T  GK+R ++ G+RH + +++ K  RN      +++     +IR  L
Sbjct: 2  QKTKKSIAKRFKLTGNGKLRRRSPGQRHHLHQKTTKQKRNLNKDKSVSAGRQADLIRG-L 60

Query: 64 PNGI 67
          P+G+
Sbjct: 61 PHGL 64


>gi|154687020|ref|YP_001422181.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens FZB42]
 gi|308174582|ref|YP_003921287.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens DSM 7]
 gi|166231155|sp|A7Z7H4|RL35_BACA2 RecName: Full=50S ribosomal protein L35
 gi|154352871|gb|ABS74950.1| RpmI [Bacillus amyloliquefaciens FZB42]
 gi|307607446|emb|CBI43817.1| ribosomal protein L35 [Bacillus amyloliquefaciens DSM 7]
 gi|328554505|gb|AEB24997.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens TA208]
          Length = 66

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R   ++++ D K+ I+
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKGAIVSAGDFKR-IK 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QQLAN 64


>gi|302391181|ref|YP_003827001.1| 50S ribosomal protein L35P [Acetohalobium arabaticum DSM 5501]
 gi|302203258|gb|ADL11936.1| LSU ribosomal protein L35P [Acetohalobium arabaticum DSM 5501]
          Length = 65

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKRF  T+ GK + +   + H M K+++   R  R    +   D    + 
Sbjct: 1  MPKMKTHKGAKKRFKKTSKGKYKRKRTKRNHLMTKKNSNKKRKLRKDATVKKCDE-DTLD 59

Query: 61 NYLPNG 66
            +PN 
Sbjct: 60 TLMPND 65


>gi|239827995|ref|YP_002950619.1| ribosomal protein L35 [Geobacillus sp. WCH70]
 gi|259647356|sp|C5D637|RL35_GEOSW RecName: Full=50S ribosomal protein L35
 gi|239808288|gb|ACS25353.1| ribosomal protein L35 [Geobacillus sp. WCH70]
          Length = 66

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H    ++ K  R  R   +++  D K+ IR
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRGHAYTSHLFANKTQKQKRKLRKATLVSPGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QLLDN 64


>gi|300858363|ref|YP_003783346.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          FRC41]
 gi|300685817|gb|ADK28739.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          FRC41]
 gi|302206078|gb|ADL10420.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          C231]
 gi|302330631|gb|ADL20825.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          1002]
 gi|308276316|gb|ADO26215.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          I19]
          Length = 64

 Score = 36.2 bits (82), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  ++ AD K+V R
Sbjct: 2  KQKTHKGTAKRVKVTGSGKLRRERANRRHLLEGKPSTRTRRLKGTEDVSKADTKRVKR 59


>gi|189345703|ref|YP_001942232.1| 50S ribosomal protein L35 [Chlorobium limicola DSM 245]
 gi|226724979|sp|B3EEB9|RL35_CHLL2 RecName: Full=50S ribosomal protein L35
 gi|189339850|gb|ACD89253.1| ribosomal protein L35 [Chlorobium limicola DSM 245]
          Length = 64

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L     K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRTRRLHQSTILDGTKEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|186685030|ref|YP_001868226.1| 50S ribosomal protein L35 [Nostoc punctiforme PCC 73102]
 gi|226725040|sp|B2J0D1|RL35_NOSP7 RecName: Full=50S ribosomal protein L35
 gi|186467482|gb|ACC83283.1| ribosomal protein L35 [Nostoc punctiforme PCC 73102]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + AGK H +  +S+   R+   T ++   D   V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAGKSHLLEHKSSDKKRSMSKTTLVHERDELNV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


>gi|327398464|ref|YP_004339333.1| 50S ribosomal protein L35 [Hippea maritima DSM 10411]
 gi|327181093|gb|AEA33274.1| 50S ribosomal protein L35 [Hippea maritima DSM 10411]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT  ++ KRFS TA G  +   AGK H +  ++ K  RN +    + S   K  ++  
Sbjct: 2  KLKTRRAAAKRFSKTANGHFKHARAGKSHLLFDKTRKRKRNLKRPNCIKSGQVKHNLKEL 61

Query: 63 LPNG 66
          +P G
Sbjct: 62 MPWG 65


>gi|72383097|ref|YP_292452.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL2A]
 gi|124026835|ref|YP_001015950.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL1A]
 gi|148887092|sp|Q46IC9|RL35_PROMT RecName: Full=50S ribosomal protein L35
 gi|166199817|sp|A2C5C6|RL35_PROM1 RecName: Full=50S ribosomal protein L35
 gi|72002947|gb|AAZ58749.1| LSU ribosomal protein L35P [Prochlorococcus marinus str. NATL2A]
 gi|123961903|gb|ABM76686.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL1A]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A   H +  +S K  R+ +   V+   DA+ V R
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFMRRRAFHNHLLDHKSPKLKRHLKTKAVVDERDAENV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


>gi|330719254|ref|ZP_08313854.1| 50S ribosomal protein L35 [Leuconostoc fallax KCTC 3537]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVK 56


>gi|291542634|emb|CBL15744.1| LSU ribosomal protein L35P [Ruminococcus bromii L2-63]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ++  GKV    A K H + K++ K  R  R T+     +  ++ R
Sbjct: 1  MPKIKTHSGAKKRFKLSKNGKVIRAHANKSHILNKKTTKRKRGLRQTVAADKTNTAQIKR 60


>gi|146282710|ref|YP_001172863.1| 50S ribosomal protein L35 [Pseudomonas stutzeri A1501]
 gi|166199824|sp|A4VM20|RL35_PSEU5 RecName: Full=50S ribosomal protein L35
 gi|145570915|gb|ABP80021.1| ribosomal protein L35 [Pseudomonas stutzeri A1501]
 gi|327481049|gb|AEA84359.1| 50S ribosomal protein L35 [Pseudomonas stutzeri DSM 4166]
          Length = 64

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G  + + A K H + K + K  R  RG   +  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFKKTANG-FKHKHAFKSHILTKMTTKRKRQLRGCSQVHPSDVAKVER 59


>gi|33241270|ref|NP_876212.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp. marinus
          str. CCMP1375]
 gi|54036291|sp|Q7V9L2|RL35_PROMA RecName: Full=50S ribosomal protein L35
 gi|33238800|gb|AAQ00865.1| Ribosomal protein L35 [Prochlorococcus marinus subsp. marinus
          str. CCMP1375]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T TGK   + A + H +  +S+K  R+     V+   D++ V
Sbjct: 1  MPKLKTRKAAAKRFKVTGTGKFMRRRAFRNHLLDHKSSKLKRHLGTKAVVDERDSENV 58


>gi|229032219|ref|ZP_04188192.1| 50S ribosomal protein L35 [Bacillus cereus AH1271]
 gi|229175283|ref|ZP_04302798.1| 50S ribosomal protein L35 [Bacillus cereus MM3]
 gi|228608115|gb|EEK65422.1| 50S ribosomal protein L35 [Bacillus cereus MM3]
 gi|228728999|gb|EEL80002.1| 50S ribosomal protein L35 [Bacillus cereus AH1271]
          Length = 66

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T +GK++   A   H    +S K  R  R   V+++ D K+ IR
Sbjct: 1  MPKQKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKAKRKLRKAGVVSAGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|87123292|ref|ZP_01079143.1| ribosomal protein L35 [Synechococcus sp. RS9917]
 gi|86169012|gb|EAQ70268.1| ribosomal protein L35 [Synechococcus sp. RS9917]
          Length = 76

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  TATGK   + A + H +  +S K  R+     V+   D ++V
Sbjct: 12 MPKLKTRKAAAKRFKATATGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEERV 69


>gi|311031379|ref|ZP_07709469.1| 50S ribosomal protein L35 [Bacillus sp. m3-13]
          Length = 66

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +G ++   A   H    +S K  R  R + +++  D K+ IR
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGSLKRSHAYTSHLFANKSQKQKRKLRKSAMVSKGDFKR-IR 59

Query: 61 NYLPN 65
          + L N
Sbjct: 60 HMLDN 64


>gi|295112052|emb|CBL28802.1| LSU ribosomal protein L35P [Synergistetes bacterium SGP1]
          Length = 66

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 1  MPKMK--TNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGT 47
          MPKMK  ++S +KKRF  TA+GK+  +  G+ H M+ +  K +R  R T
Sbjct: 1  MPKMKLKSHSGAKKRFFRTASGKLAYRKCGRSHIMVHKGAKRMRTLRKT 49


>gi|206603262|gb|EDZ39742.1| Ribosomal protein L35 [Leptospirillum sp. Group II '5-way CG']
          Length = 65

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASAD 54
          K+K  S++ KRF ++ TGK+R     KRH M  +S+K  R+ + GT+    +D
Sbjct: 6  KLKVKSAASKRFFVSGTGKIRYHKTNKRHLMTSKSSKRTRSLKTGTLEKGQSD 58


>gi|117928475|ref|YP_873026.1| 50S ribosomal protein L35P [Acidothermus cellulolyticus 11B]
 gi|166231145|sp|A0LUD0|RL35_ACIC1 RecName: Full=50S ribosomal protein L35
 gi|117648938|gb|ABK53040.1| LSU ribosomal protein L35P [Acidothermus cellulolyticus 11B]
          Length = 64

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT++ + KRF +T TGK+  + A + H +  + ++  R     + +A+AD  ++ R
Sbjct: 1  MPKFKTHTGAGKRFRVTGTGKLMRRRANRNHLLEHKPSRRTRRLWNEVPVAAADTARMRR 60


>gi|89101227|ref|ZP_01174053.1| 50S ribosomal protein L35 [Bacillus sp. NRRL B-14911]
 gi|89084056|gb|EAR63231.1| 50S ribosomal protein L35 [Bacillus sp. NRRL B-14911]
          Length = 66

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R   +++  D ++ IR
Sbjct: 1  MPKMKTHRGTAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKAAIVSKGDFRR-IR 59

Query: 61 NYLPN 65
          + L N
Sbjct: 60 HMLDN 64


>gi|170016926|ref|YP_001727845.1| ribosomal protein L35 [Leuconostoc citreum KM20]
 gi|296110552|ref|YP_003620933.1| ribosomal protein L35 [Leuconostoc kimchii IMSNU 11154]
 gi|300173541|ref|YP_003772707.1| 50S ribosomal protein L35 [Leuconostoc gasicomitatum LMG 18811]
 gi|226725029|sp|B1MXZ9|RL35_LEUCK RecName: Full=50S ribosomal protein L35
 gi|169803783|gb|ACA82401.1| Ribosomal protein L35 [Leuconostoc citreum KM20]
 gi|295832083|gb|ADG39964.1| ribosomal protein L35 [Leuconostoc kimchii IMSNU 11154]
 gi|299887920|emb|CBL91888.1| 50S ribosomal protein L35 [Leuconostoc gasicomitatum LMG 18811]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVK 56


>gi|116618537|ref|YP_818908.1| 50S ribosomal protein L35P [Leuconostoc mesenteroides subsp.
          mesenteroides ATCC 8293]
 gi|227431922|ref|ZP_03913944.1| ribosomal protein L35 [Leuconostoc mesenteroides subsp. cremoris
          ATCC 19254]
 gi|122271263|sp|Q03W87|RL35_LEUMM RecName: Full=50S ribosomal protein L35
 gi|116097384|gb|ABJ62535.1| LSU ribosomal protein L35P [Leuconostoc mesenteroides subsp.
          mesenteroides ATCC 8293]
 gi|227352326|gb|EEJ42530.1| ribosomal protein L35 [Leuconostoc mesenteroides subsp. cremoris
          ATCC 19254]
          Length = 65

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVK 56


>gi|78186011|ref|YP_374054.1| 50S ribosomal protein L35 [Chlorobium luteolum DSM 273]
 gi|148887090|sp|Q3B6M0|RL35_PELLD RecName: Full=50S ribosomal protein L35
 gi|78165913|gb|ABB23011.1| LSU ribosomal protein L35P [Chlorobium luteolum DSM 273]
          Length = 65

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L +A  +K I+
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRTRRLHQSTMLDNATKEKQIK 60

Query: 61 NYL 63
            +
Sbjct: 61 RMI 63


>gi|90994462|ref|YP_536952.1| ribosomal protein L35 [Porphyra yezoensis]
 gi|125988418|sp|Q1XDL6|RK35_PORYE RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|90819026|dbj|BAE92395.1| 50S ribosomal protein L35 [Porphyra yezoensis]
          Length = 65

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+ +  KRF ++++GK     A K H + K+S+K  R+   T  +   D K +
Sbjct: 1  MPKLKTSKAIAKRFKVSSSGKFLRHKASKSHLLQKKSSKQRRHLSSTCSVDLKDIKNI 58


>gi|317129889|ref|YP_004096171.1| ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
 gi|315474837|gb|ADU31440.1| ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
          Length = 62

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S + KRF  T TGK++       H    +S K  R  R   +++ +D K++
Sbjct: 1  MPKMKTHSGASKRFKKTGTGKLKRAHGYTSHLAANKSQKQKRKLRKGALVSKSDQKRI 58


>gi|317131312|ref|YP_004090626.1| ribosomal protein L35 [Ethanoligenens harbinense YUAN-3]
 gi|315469291|gb|ADU25895.1| ribosomal protein L35 [Ethanoligenens harbinense YUAN-3]
          Length = 66

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+S + KR   T TGK++   A K H + K+  K     RG    A ADA  V
Sbjct: 1  MPKLKTHSGASKRLRFTKTGKIKRAHAFKSHILNKKDTK---RKRGLRQAAYADATNV 55


>gi|149196437|ref|ZP_01873492.1| 50S ribosomal protein L35 [Lentisphaera araneosa HTCC2155]
 gi|149140698|gb|EDM29096.1| 50S ribosomal protein L35 [Lentisphaera araneosa HTCC2155]
          Length = 67

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASADAKKVI 59
          MPK KT     KR   T TGK     AGKRH + K+S K  R AR GT  +        +
Sbjct: 1  MPKQKTRKCVAKRLKQTGTGKFIRCRAGKRHILTKKSPK--RKARLGTSTVLKDCELNAV 58

Query: 60 RNYLPNGI 67
          +  LP G+
Sbjct: 59 KAALPYGL 66


>gi|73748563|ref|YP_307802.1| 50S ribosomal protein L35 [Dehalococcoides sp. CBDB1]
 gi|147669323|ref|YP_001214141.1| 50S ribosomal protein L35 [Dehalococcoides sp. BAV1]
 gi|289432590|ref|YP_003462463.1| ribosomal protein L35 [Dehalococcoides sp. GT]
 gi|148840421|sp|Q3ZXB7|RL35_DEHSC RecName: Full=50S ribosomal protein L35
 gi|189042766|sp|A5FRB1|RL35_DEHSB RecName: Full=50S ribosomal protein L35
 gi|73660279|emb|CAI82886.1| ribosomal protein L35 [Dehalococcoides sp. CBDB1]
 gi|146270271|gb|ABQ17263.1| LSU ribosomal protein L35P [Dehalococcoides sp. BAV1]
 gi|288946310|gb|ADC74007.1| ribosomal protein L35 [Dehalococcoides sp. GT]
          Length = 67

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK+      K H    +S + +R       +A  D  + I+
Sbjct: 1  MPKMKTRKTAAKRFHVTGTGKIMRSKGMKSHLRRNKSARVLRQFDEMSQVAGVDRAR-IQ 59

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 60 KLIPYGV 66


>gi|221632834|ref|YP_002522056.1| 50S ribosomal protein L35 [Thermomicrobium roseum DSM 5159]
 gi|254803163|sp|B9KZB4|RL35_THERP RecName: Full=50S ribosomal protein L35
 gi|221157251|gb|ACM06378.1| ribosomal protein L35 [Thermomicrobium roseum DSM 5159]
          Length = 66

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  ++ KRF IT TGKV      + H  +K++ +  R+      +  +D  +V
Sbjct: 1  MPKMKTKRAAAKRFKITGTGKVMRMRHARNHNRLKKAPRVRRSFDKMAPVHPSDVHRV 58


>gi|116779211|gb|ABK21182.1| unknown [Picea sitchensis]
 gi|148908537|gb|ABR17379.1| unknown [Picea sitchensis]
          Length = 153

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLVKKNTK 120


>gi|86610269|ref|YP_479031.1| 50S ribosomal protein L35 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|148887120|sp|Q2JI03|RL35_SYNJB RecName: Full=50S ribosomal protein L35
 gi|86558811|gb|ABD03768.1| ribosomal protein L35 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 66

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK   + AG  H +  +++K  R   G  ++   D   V R
Sbjct: 1  MPKIKTRKAAAKRFRLTGSGKFMRRRAGHNHLLEHKTSKRKRKLAGVALVDKRDVVNV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 LMLPN 64


>gi|281357059|ref|ZP_06243549.1| ribosomal protein L35 [Victivallis vadensis ATCC BAA-548]
 gi|281316617|gb|EFB00641.1| ribosomal protein L35 [Victivallis vadensis ATCC BAA-548]
          Length = 66

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KR   T TGK R   AG RH    ++ K  R  R    + S + ++ I+
Sbjct: 1  MPKLKTRKCAAKRLKETGTGKFRHHKAGGRHLKSAKNAKRRRRLRQDGAVKSTEMRR-IK 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 AALPYGL 66


>gi|85059398|ref|YP_455100.1| 50S ribosomal protein L35 [Sodalis glossinidius str. 'morsitans']
 gi|148887110|sp|Q2NT30|RL35_SODGM RecName: Full=50S ribosomal protein L35
 gi|84779918|dbj|BAE74695.1| 50S ribosomal protein L35 [Sodalis glossinidius str. 'morsitans']
          Length = 65

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+R
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKSMVSKGDLGLVVR 60


>gi|72162464|ref|YP_290121.1| 50S ribosomal protein L35P [Thermobifida fusca YX]
 gi|134039203|sp|Q47N71|RL35_THEFY RecName: Full=50S ribosomal protein L35
 gi|71916196|gb|AAZ56098.1| LSU ribosomal protein L35P [Thermobifida fusca YX]
          Length = 63

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK K++S + +RF +T TGK+  +   K H +  + +K  R     + ++ ADA+K+
Sbjct: 1  MPKNKSHSGASRRFRVTGTGKIMRRRTNKNHLLEHKPSKRTRRLSVDVRVSPADARKI 58


>gi|33862329|ref|NP_893889.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9313]
 gi|124021775|ref|YP_001016082.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9303]
 gi|54036290|sp|Q7V998|RL35_PROMM RecName: Full=50S ribosomal protein L35
 gi|166199818|sp|A2C5Q7|RL35_PROM3 RecName: Full=50S ribosomal protein L35
 gi|33640442|emb|CAE20231.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9313]
 gi|123962061|gb|ABM76817.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9303]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   DA+ V R
Sbjct: 1  MPKLKTRKAAAKRFKATVTGKFMRRRAFRNHLLDHKSPKLKRHLATKAVVDERDAENV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


>gi|298492612|ref|YP_003722789.1| 50S ribosomal protein L35 ['Nostoc azollae' 0708]
 gi|298234530|gb|ADI65666.1| ribosomal protein L35 ['Nostoc azollae' 0708]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + A K H +  +S    RN    +++   DA  V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKSADKKRNMSKMVIVDERDADNV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


>gi|116747874|ref|YP_844561.1| 50S ribosomal protein L35 [Syntrophobacter fumaroxidans MPOB]
 gi|166233045|sp|A0LFC4|RL35_SYNFM RecName: Full=50S ribosomal protein L35
 gi|116696938|gb|ABK16126.1| LSU ribosomal protein L35P [Syntrophobacter fumaroxidans MPOB]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLA 51
          MPKMKTN ++ KRF  T TGK     A K H + K+S +  R  R GT V A
Sbjct: 1  MPKMKTNRAAAKRFKRTGTGKFMRARANKSHILTKKSPQRKRRLRQGTAVDA 52


>gi|20808118|ref|NP_623289.1| ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
 gi|22096085|sp|Q8R9C3|RL35_THETN RecName: Full=50S ribosomal protein L35
 gi|20516705|gb|AAM24893.1| Ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
          Length = 67

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF +  +GKV+   A K H +  +S+K  R  R    L  A A K I+  
Sbjct: 5  KMKTHRGAAKRFKVLKSGKVKRMKAYKSHLLTHKSSKRKRRLRKATYLEGASA-KTIKRL 63

Query: 63 LP 64
          LP
Sbjct: 64 LP 65


>gi|256819831|ref|YP_003141110.1| 50S ribosomal protein L35 [Capnocytophaga ochracea DSM 7271]
 gi|315225230|ref|ZP_07867047.1| 50S ribosomal protein L35 [Capnocytophaga ochracea F0287]
 gi|256581414|gb|ACU92549.1| ribosomal protein L35 [Capnocytophaga ochracea DSM 7271]
 gi|314944913|gb|EFS96945.1| 50S ribosomal protein L35 [Capnocytophaga ochracea F0287]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK+KT S +KKRF +T +GK++ + A K H
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSH 31


>gi|332878707|ref|ZP_08446424.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
 gi|332683344|gb|EGJ56224.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK+KT S +KKRF +T +GK++ + A K H
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSH 31


>gi|213963325|ref|ZP_03391581.1| ribosomal protein L35 [Capnocytophaga sputigena Capno]
 gi|213953993|gb|EEB65319.1| ribosomal protein L35 [Capnocytophaga sputigena Capno]
          Length = 65

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK+KT S +KKRF +T +GK++ + A K H
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSH 31


>gi|189219985|ref|YP_001940625.1| ribosomal protein L35 [Methylacidiphilum infernorum V4]
 gi|189186843|gb|ACD84028.1| Ribosomal protein L35 [Methylacidiphilum infernorum V4]
          Length = 69

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          +P+ KT  +  KRF ++A GK+  + +G+RH    ++ K +R      V+  +D KK++ 
Sbjct: 5  IPRRKTKKAVAKRFKVSAKGKILYRGSGRRHLASSKNRKRMRRIGSVKVVDDSDRKKIVE 64

Query: 61 NYLP 64
          + LP
Sbjct: 65 S-LP 67


>gi|146329780|ref|YP_001209436.1| 50S ribosomal protein L35 [Dichelobacter nodosus VCS1703A]
 gi|146233250|gb|ABQ14228.1| 50S ribosomal protein L35 [Dichelobacter nodosus VCS1703A]
          Length = 79

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T  G  +   +  RH + K++ K  R+ RG M + ++D K V
Sbjct: 18 MPKMKTHRGAAKRFKKTKNG-YKVGHSHVRHILTKKTTKRKRHLRGLMQVHASDVKAV 74


>gi|194333011|ref|YP_002014871.1| 50S ribosomal protein L35 [Prosthecochloris aestuarii DSM 271]
 gi|226725048|sp|B4S3D0|RL35_PROA2 RecName: Full=50S ribosomal protein L35
 gi|194310829|gb|ACF45224.1| ribosomal protein L35 [Prosthecochloris aestuarii DSM 271]
          Length = 64

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GKV+ +     H + K++ K  R    + ++ S   K++ R
Sbjct: 1  MPKMKSHRGACKRFKKTASGKVKRERMYGSHNLEKKNRKRTRRLHQSTLVDSTQEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|325957292|ref|YP_004292704.1| 50S ribosomal protein L35 [Lactobacillus acidophilus 30SC]
 gi|325333857|gb|ADZ07765.1| 50S ribosomal protein L35 [Lactobacillus acidophilus 30SC]
 gi|327184022|gb|AEA32469.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1118]
          Length = 66

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++S+D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSSSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|332967752|gb|EGK06858.1| 50S ribosomal protein L35 [Desmospora sp. 8437]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  ++ KRF+ T TGKV+   A   H +  +     R  R +  ++ +D K++
Sbjct: 1  MPKMKTRRAAAKRFNKTGTGKVKRNHAYMNHMLEHKPKSAKRKLRKSTTMSKSDVKRI 58


>gi|218886084|ref|YP_002435405.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris str. 'Miyazaki
          F']
 gi|226724997|sp|B8DPN0|RL35_DESVM RecName: Full=50S ribosomal protein L35
 gi|218757038|gb|ACL07937.1| ribosomal protein L35 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 65

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 11/69 (15%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL---ASADA-- 55
          MPK+KT  S+ KRFS+T +GK + +    RH + K      +NA+  M L   A+ D+  
Sbjct: 1  MPKIKTRRSAAKRFSVTGSGKFKRRKQNLRHILTK------KNAKRRMRLGQSATVDSTN 54

Query: 56 KKVIRNYLP 64
          +K +R  +P
Sbjct: 55 EKAVRRMMP 63


>gi|167948465|ref|ZP_02535539.1| 50S ribosomal protein L35 [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 61

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPK+KTN  + KRF  TA+G  +  A+ +RH + K+S++
Sbjct: 1  MPKIKTNRGAAKRFKRTASGSFKRNASHRRHILTKKSHQ 39


>gi|319955801|ref|YP_004167064.1| LSU ribosomal protein l35p [Nitratifractor salsuginis DSM 16511]
 gi|319418205|gb|ADV45315.1| LSU ribosomal protein L35P [Nitratifractor salsuginis DSM 16511]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+   + KRF I  +GK++   A + H + K   K  R  R    +  ADAK +
Sbjct: 1  MPKMKSVKGAVKRFKIKKSGKIKRGTAYRSHILTKVDGKHHRQMRKPKYVDQADAKNI 58


>gi|288818525|ref|YP_003432873.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
 gi|288787925|dbj|BAI69672.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
 gi|308752115|gb|ADO45598.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
          Length = 66

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 31/56 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KMK+N S+KKRF ITA GK++   AG  H   K++    R  R   ++ S    K+
Sbjct: 5  KMKSNRSAKKRFKITAKGKIKRWHAGGSHYNTKKAKDRKRRLRKPTLVNSGWEDKI 60


>gi|229820870|ref|YP_002882396.1| ribosomal protein L35 [Beutenbergia cavernae DSM 12333]
 gi|259647344|sp|C5BW33|RL35_BEUC1 RecName: Full=50S ribosomal protein L35
 gi|229566783|gb|ACQ80634.1| ribosomal protein L35 [Beutenbergia cavernae DSM 12333]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KTNS +KKRF +T +GK+  + A + H   +RS   +R       ++SAD K +
Sbjct: 1  MPKNKTNSGAKKRFRVTGSGKIMHKRAHQTHKFEERSRSSVRRLSNDAEVSSADRKSI 58


>gi|307822738|ref|ZP_07652969.1| ribosomal protein L35 [Methylobacter tundripaludum SV96]
 gi|307736342|gb|EFO07188.1| ribosomal protein L35 [Methylobacter tundripaludum SV96]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T  G  +   + +RH + K+S K  R  R    +  +D +   R
Sbjct: 1  MPKIKTNRGAAKRFRRTGNGGFKCGQSHRRHILTKKSTKRKRQLRSPATIHPSDVRMAAR 60


>gi|296271845|ref|YP_003654476.1| 50S ribosomal protein L35 [Arcobacter nitrofigilis DSM 7299]
 gi|296096020|gb|ADG91970.1| ribosomal protein L35 [Arcobacter nitrofigilis DSM 7299]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S + KRF +   G ++  +A + H + K S K     RG   + S DA +V R
Sbjct: 1  MPKMKSVSGALKRFKVKKNGSIKCGSAFRSHILTKMSRKRKVALRGPQTIDSTDATRVRR 60


>gi|269123271|ref|YP_003305848.1| 50S ribosomal protein L35 [Streptobacillus moniliformis DSM
          12112]
 gi|268314597|gb|ACZ00971.1| ribosomal protein L35 [Streptobacillus moniliformis DSM 12112]
          Length = 68

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT+  +KKR  +T TGK   + +GK H
Sbjct: 1  MPKMKTHKGTKKRVKVTGTGKFVVKHSGKSH 31


>gi|160945994|ref|ZP_02093220.1| hypothetical protein FAEPRAM212_03527 [Faecalibacterium
          prausnitzii M21/2]
 gi|313115005|ref|ZP_07800498.1| ribosomal protein L35 [Faecalibacterium cf. prausnitzii KLE1255]
 gi|158443725|gb|EDP20730.1| hypothetical protein FAEPRAM212_03527 [Faecalibacterium
          prausnitzii M21/2]
 gi|295100356|emb|CBK97901.1| LSU ribosomal protein L35P [Faecalibacterium prausnitzii L2-6]
 gi|295103246|emb|CBL00790.1| LSU ribosomal protein L35P [Faecalibacterium prausnitzii SL3/3]
 gi|310622696|gb|EFQ06158.1| ribosomal protein L35 [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 67

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T  GK++   A + H + K++ K  R  R    +   +A   I++ 
Sbjct: 5  KLKTHSGAKKRFKLTKNGKIKRGHAFRSHILTKKTTKLTRGYRQPSYVDKTNA-ATIKSM 63

Query: 63 LP 64
          LP
Sbjct: 64 LP 65


>gi|225849638|ref|YP_002729872.1| 50S ribosomal protein L35 [Persephonella marina EX-H1]
 gi|254802464|sp|C0QT57|RL35_PERMH RecName: Full=50S ribosomal protein L35
 gi|225646407|gb|ACO04593.1| ribosomal protein L35 [Persephonella marina EX-H1]
          Length = 68

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          KMKTN ++ KRF +TA GK++    G  H   K+S+K  R  R
Sbjct: 5  KMKTNKTAAKRFKVTAKGKIKYWKGGVSHYNTKKSSKRKRQGR 47


>gi|332288526|ref|YP_004419378.1| 50S ribosomal protein L35 [Gallibacterium anatis UMN179]
 gi|330431422|gb|AEC16481.1| 50S ribosomal protein L35 [Gallibacterium anatis UMN179]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T TG  + + +  RH + K+S K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTGTGGFKRKQSHLRHILTKKSTKRKRHLRHKSMVAKADQVLVV 59


>gi|229916377|ref|YP_002885023.1| 50S ribosomal protein L35 [Exiguobacterium sp. AT1b]
 gi|259647355|sp|C4L456|RL35_EXISA RecName: Full=50S ribosomal protein L35
 gi|229467806|gb|ACQ69578.1| ribosomal protein L35 [Exiguobacterium sp. AT1b]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++   A   H    +S K  R  R   ++++ D K+ IR
Sbjct: 1  MPKMKSHRGASKRFKRTASGKLKRSHAYTSHLFANKSTKAKRKLRKGAIVSAGDFKR-IR 59

Query: 61 NYL 63
          N +
Sbjct: 60 NMI 62


>gi|297183099|gb|ADI19243.1| hypothetical protein [uncultured delta proteobacterium
          HF0200_14D13]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF +T  GK++ + A  RH M KRS    R  R    +   D   ++   
Sbjct: 2  KMKTHRGAAKRFRVTGGGKIKRKRAYLRHNMRKRSQDAKRVLRKKTYVTVEDM-GLVERL 60

Query: 63 LPN 65
          LPN
Sbjct: 61 LPN 63


>gi|257069326|ref|YP_003155581.1| 50S ribosomal protein L35P [Brachybacterium faecium DSM 4810]
 gi|256560144|gb|ACU85991.1| LSU ribosomal protein L35P [Brachybacterium faecium DSM 4810]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S +KKR  +T +GK+  + A  RH +  +S+   R       +A AD K++
Sbjct: 1  MPKNKTHSGTKKRVRVTGSGKLMREQANARHLLEHKSSTRKRRLGSDTDVAKADVKRM 58


>gi|326693741|ref|ZP_08230746.1| 50S ribosomal protein L35 [Leuconostoc argentinum KCTC 3773]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVL 50
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R+ RGT ++
Sbjct: 1  MPKMKTHRASAKRFKKTAHGGLKSASAYTSHRFHGKTKKQRRHLRGTHMM 50


>gi|148536299|gb|ABQ85702.1| 50S ribosomal protein L35 [Mycoplasma fermentans]
          Length = 66

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT S+ KKR  IT TGK+  + A + H
Sbjct: 23 MPKMKTKSALKKRIKITGTGKIMREQAYRSH 53


>gi|93007125|ref|YP_581562.1| 50S ribosomal protein L35 [Psychrobacter cryohalolentis K5]
 gi|148887097|sp|Q1Q8C5|RL35_PSYCK RecName: Full=50S ribosomal protein L35
 gi|92394803|gb|ABE76078.1| LSU ribosomal protein L35P [Psychrobacter cryohalolentis K5]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT S + KRF  TA G  R QA  K H + K+S K IR  RG  ++  +D   V R
Sbjct: 4  KMKTRSGAAKRFKKTANGFKRKQAF-KSHILTKKSPKRIRQLRGLKLVHKSDEAAVRR 60


>gi|319440341|ref|ZP_07989497.1| 50S ribosomal protein L35 [Corynebacterium variabile DSM 44702]
          Length = 64

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  ++  D K++ R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSTRTRRLKGTTEVSGDDTKRIKR 59


>gi|149072052|ref|YP_001293564.1| ribosomal protein L35 [Rhodomonas salina]
 gi|134303003|gb|ABO70807.1| ribosomal protein L35 [Rhodomonas salina]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S  KRF  T  GK   + A K H + K+S K  RN     V++  ++  V+R
Sbjct: 1  MPKLKTRKSVLKRFKKTVNGKFIRRKACKGHLLEKKSAKRKRNLSQKAVVSFGES-LVLR 59

Query: 61 NYLP 64
          + LP
Sbjct: 60 SLLP 63


>gi|302871993|ref|YP_003840629.1| ribosomal protein L35 [Caldicellulosiruptor obsidiansis OB47]
 gi|302574852|gb|ADL42643.1| ribosomal protein L35 [Caldicellulosiruptor obsidiansis OB47]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  ++ +GK   + AGK H +  ++ K  RN + T+V+ + +  K ++
Sbjct: 1  MPKLKTHRGLAKRIKMSGSGKYLRKRAGKSHLLSGKTRKRKRNLKKTVVVDATNV-KAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KLLP 63


>gi|148536296|gb|ABQ85700.1| 50S ribosomal protein L35 [Mycoplasma caviae]
          Length = 66

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT S+ KKR  IT TGK+  + A + H
Sbjct: 23 MPKMKTKSALKKRIKITGTGKIMREQAYRSH 53


>gi|195625112|gb|ACG34386.1| 50S ribosomal protein L35 [Zea mays]
          Length = 143

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 74  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTK 110


>gi|242093732|ref|XP_002437356.1| hypothetical protein SORBIDRAFT_10g025480 [Sorghum bicolor]
 gi|241915579|gb|EER88723.1| hypothetical protein SORBIDRAFT_10g025480 [Sorghum bicolor]
          Length = 142

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 73  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTK 109


>gi|167751464|ref|ZP_02423591.1| hypothetical protein EUBSIR_02460 [Eubacterium siraeum DSM 15702]
 gi|167655272|gb|EDR99401.1| hypothetical protein EUBSIR_02460 [Eubacterium siraeum DSM 15702]
 gi|291530273|emb|CBK95858.1| LSU ribosomal protein L35P [Eubacterium siraeum 70/3]
 gi|291557088|emb|CBL34205.1| LSU ribosomal protein L35P [Eubacterium siraeum V10Sc8a]
          Length = 68

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          K+KT+S +KKRF+I+  GKV+ Q   +RH + +++ K
Sbjct: 6  KIKTHSGAKKRFNISKNGKVKYQKTNRRHRLTQKATK 42


>gi|227547605|ref|ZP_03977654.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 55813]
 gi|227211860|gb|EEI79756.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 55813]
          Length = 61

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MKTNS++ KR  IT TGKV+   +  RH +  +S +  R      VL    AKK+
Sbjct: 1  MKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKL 55


>gi|156502858|ref|YP_001428923.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica FTNF002-00]
 gi|290954129|ref|ZP_06558750.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|295312447|ref|ZP_06803219.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|166231185|sp|A7NDB4|RL35_FRATF RecName: Full=50S ribosomal protein L35
 gi|156253461|gb|ABU61967.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FTNF002-00]
          Length = 65

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+ KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSSAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTTSLVQ 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|86607413|ref|YP_476176.1| 50S ribosomal protein L35 [Synechococcus sp. JA-3-3Ab]
 gi|148887119|sp|Q2JR50|RL35_SYNJA RecName: Full=50S ribosomal protein L35
 gi|86555955|gb|ABD00913.1| ribosomal protein L35 [Synechococcus sp. JA-3-3Ab]
          Length = 66

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK   + AG  H +  +++   R   G  +++  D   V R
Sbjct: 1  MPKIKTRKAAAKRFRLTGSGKFMRRRAGHNHLLEHKTSNRKRKLAGVALVSKQDLANV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 LMLPN 64


>gi|294501487|ref|YP_003565187.1| 50S ribosomal protein L35 [Bacillus megaterium QM B1551]
 gi|295706835|ref|YP_003599910.1| 50S ribosomal protein L35 [Bacillus megaterium DSM 319]
 gi|294351424|gb|ADE71753.1| 50S ribosomal protein L35 [Bacillus megaterium QM B1551]
 gi|294804494|gb|ADF41560.1| 50S ribosomal protein L35 [Bacillus megaterium DSM 319]
          Length = 66

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R   +++  D K+ IR
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRARAYTSHLFANKSTKQKRKLRKGSLVSKGDFKR-IR 59

Query: 61 NYLPN 65
          + L N
Sbjct: 60 HLLDN 64


>gi|284048035|ref|YP_003398374.1| ribosomal protein L35 [Acidaminococcus fermentans DSM 20731]
 gi|283952256|gb|ADB47059.1| ribosomal protein L35 [Acidaminococcus fermentans DSM 20731]
          Length = 65

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT  S+ KRF  TA+G+ +   A + H +  +S    RN R   ++   D ++V
Sbjct: 1  MPKMKTRRSAAKRFKATASGEFKRGKAFRSHILEHKSPTRKRNLRKAALVHKTDHERV 58


>gi|257126073|ref|YP_003164187.1| ribosomal protein L35 [Leptotrichia buccalis C-1013-b]
 gi|257050012|gb|ACV39196.1| ribosomal protein L35 [Leptotrichia buccalis C-1013-b]
          Length = 68

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT+  +KKR  +T +GK+  + +GK H
Sbjct: 1  MPKMKTHKGTKKRVKVTGSGKISLRHSGKSH 31


>gi|33862217|ref|NP_893778.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp.
          pastoris str. CCMP1986]
 gi|54036289|sp|Q7UZK2|RL35_PROMP RecName: Full=50S ribosomal protein L35
 gi|33634435|emb|CAE20120.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp.
          pastoris str. CCMP1986]
          Length = 65

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+ +   V+   DA  V
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFTRRRAFHNHLLDHKSSKLKRHLKTKAVVDERDADNV 58


>gi|161511507|ref|NP_853140.2| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(low)]
 gi|118573013|sp|Q7NBC1|RL35_MYCGA RecName: Full=50S ribosomal protein L35
 gi|284812052|gb|AAP56708.2| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(low)]
 gi|284930622|gb|ADC30561.1| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(high)]
 gi|284931467|gb|ADC31405.1| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. F]
          Length = 64

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT S++ KRF  T +GK++ + A   H    ++ K  R+ R   ++   D K++
Sbjct: 1  MPKMKTKSAAAKRFKTTKSGKIKRKQAYTSHLAPNKTTKQKRHLRKDGLVHKTDFKRI 58


>gi|162459117|ref|NP_001105156.1| prpl35-1 protein [Zea mays]
 gi|28411202|emb|CAD24032.1| putative plastid ribosomal protein L35 [Zea mays]
 gi|28411214|emb|CAD24037.1| putative plastid ribosomal protein L35 [Zea mays]
 gi|194700284|gb|ACF84226.1| unknown [Zea mays]
 gi|195619608|gb|ACG31634.1| 50S ribosomal protein L35 [Zea mays]
          Length = 143

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 74  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTK 110


>gi|28411216|emb|CAD24038.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 120

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 51 KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTK 87


>gi|30682291|ref|NP_850047.1| ribosomal protein L35 family protein [Arabidopsis thaliana]
 gi|17529002|gb|AAL38711.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|20465445|gb|AAM20182.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|330252434|gb|AEC07528.1| Ribosomal protein L35 [Arabidopsis thaliana]
          Length = 145

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK
Sbjct: 76  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 112


>gi|297583669|ref|YP_003699449.1| 50S ribosomal protein L35 [Bacillus selenitireducens MLS10]
 gi|297142126|gb|ADH98883.1| ribosomal protein L35 [Bacillus selenitireducens MLS10]
          Length = 62

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S + KRF  T +GK++   A   H    +S K  R  R   +++  D K++
Sbjct: 1  MPKMKTHSGASKRFKKTGSGKLKRGKAFTSHLAANKSQKQKRKLRKAGLVSKGDQKRI 58


>gi|311115049|ref|YP_003986270.1| 50S ribosomal protein L35 [Gardnerella vaginalis ATCC 14019]
 gi|310946543|gb|ADP39247.1| 50S ribosomal protein L35 [Gardnerella vaginalis ATCC 14019]
          Length = 61

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MKTNS++ KR  +T TGKV    +  RH +  +S +  R      VLA+A +K +
Sbjct: 1  MKTNSAASKRVRLTGTGKVMHDGSAMRHNLEHKSARKRRALSADKVLATAQSKNL 55


>gi|257440571|ref|ZP_05616326.1| ribosomal protein L35 [Faecalibacterium prausnitzii A2-165]
 gi|257196894|gb|EEU95178.1| ribosomal protein L35 [Faecalibacterium prausnitzii A2-165]
          Length = 67

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T  GK++   A + H + K++ K  R  R    +   +A   I++ 
Sbjct: 5  KLKTHSGAKKRFKLTKNGKIKRGHAFRSHILTKKTTKLTRGYRQPNYVDKTNA-ATIKSM 63

Query: 63 LP 64
          LP
Sbjct: 64 LP 65


>gi|15606166|ref|NP_213543.1| ribosomal protein L35 [Aquifex aeolicus VF5]
 gi|6226000|sp|O66982|RL35_AQUAE RecName: Full=50S ribosomal protein L35
 gi|2983363|gb|AAC06950.1| ribosomal protein L35 [Aquifex aeolicus VF5]
          Length = 67

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          KMKTN S+ KRF +TA GK++   +G  H   K+S+K  R+ R
Sbjct: 5  KMKTNRSAAKRFKVTAKGKIKRWKSGGAHYNTKKSSKRKRHLR 47


>gi|7572943|emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana]
          Length = 140

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK
Sbjct: 71  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 107


>gi|116620341|ref|YP_822497.1| 50S ribosomal protein L35P [Candidatus Solibacter usitatus
          Ellin6076]
 gi|122255366|sp|Q029R4|RL35_SOLUE RecName: Full=50S ribosomal protein L35
 gi|116223503|gb|ABJ82212.1| LSU ribosomal protein L35P [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 64

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TG V    A  RH +  + +K  +    ++V   AD +KV++
Sbjct: 1  MPKLKTHKGASKRFKKTGTGLVVRNRAFGRHILTSKPHKRKKKLHQSVVADKAD-QKVLK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|114566618|ref|YP_753772.1| 50S ribosomal protein L35 [Syntrophomonas wolfei subsp. wolfei
          str. Goettingen]
 gi|122318331|sp|Q0AY03|RL35_SYNWW RecName: Full=50S ribosomal protein L35
 gi|114337553|gb|ABI68401.1| LSU ribosomal protein L35P [Syntrophomonas wolfei subsp. wolfei
          str. Goettingen]
          Length = 64

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TGK++   A   H +  +S K  RN R   +++ A+ + + R
Sbjct: 1  MPKIKTHRGAAKRFKKTGTGKIKRSKAYASHLLGGKSPKRKRNLRKAGLVSEAETRGISR 60


>gi|294101706|ref|YP_003553564.1| ribosomal protein L35 [Aminobacterium colombiense DSM 12261]
 gi|293616686|gb|ADE56840.1| ribosomal protein L35 [Aminobacterium colombiense DSM 12261]
          Length = 65

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPK+K++S +KKRFS T TGK   +  G+ H
Sbjct: 1  MPKLKSHSGAKKRFSSTGTGKFSYRKNGRGH 31


>gi|124516421|gb|EAY57929.1| ribosomal protein L35 [Leptospirillum rubarum]
          Length = 65

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR-GTMVLASAD 54
          K+K  S++ KRF ++ TGK+R     KRH M  +S K  R+ + GT+    +D
Sbjct: 6  KLKVKSAASKRFFVSGTGKIRYHKTNKRHLMTSKSAKRTRSLKTGTLEKGQSD 58


>gi|40062534|gb|AAR37479.1| ribosomal protein L35 [uncultured marine bacterium 106]
          Length = 75

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF  T  G  + + A  RHGM KR+    R  R   ++++AD+  V    
Sbjct: 13 KMKTHRGAAKRFKKTGGGGYKRKRAFLRHGMRKRNQDTKRVLRKKAMVSAADSNSVD-MM 71

Query: 63 LPNG 66
          LPNG
Sbjct: 72 LPNG 75


>gi|310779333|ref|YP_003967666.1| LSU ribosomal protein L35P [Ilyobacter polytropus DSM 2926]
 gi|309748656|gb|ADO83318.1| LSU ribosomal protein L35P [Ilyobacter polytropus DSM 2926]
          Length = 68

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  +KKR  ITA GK   + +G  H + K+        +   V     A+K +R
Sbjct: 1  MPKMKSHKGTKKRVKITAKGKFVVKHSGTSHILTKKKRNKKNKLKKDFVAGEGSARK-LR 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 VLLPTG 65


>gi|322436972|ref|YP_004219184.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX9]
 gi|321164699|gb|ADW70404.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX9]
          Length = 108

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK+KT+S + KRF+ T TGK +   +  RH +  ++NK       + +++ AD   V R
Sbjct: 44  MPKLKTHSGAAKRFTKTGTGKFKRGHSKMRHILTSKNNKTKSRLGKSGLVSDADHYNVSR 103


>gi|259500521|ref|ZP_05743423.1| 50S ribosomal protein L35 [Lactobacillus iners DSM 13335]
 gi|302191211|ref|ZP_07267465.1| 50S ribosomal protein L35 [Lactobacillus iners AB-1]
 gi|309803283|ref|ZP_07697380.1| ribosomal protein L35 [Lactobacillus iners LactinV 11V1-d]
 gi|309805183|ref|ZP_07699235.1| ribosomal protein L35 [Lactobacillus iners LactinV 09V1-c]
 gi|309807118|ref|ZP_07701095.1| ribosomal protein L35 [Lactobacillus iners LactinV 03V1-b]
 gi|309808030|ref|ZP_07701949.1| ribosomal protein L35 [Lactobacillus iners LactinV 01V1-a]
 gi|309810259|ref|ZP_07704104.1| ribosomal protein L35 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871812|ref|ZP_07731900.1| ribosomal protein L35 [Lactobacillus iners LEAF 3008A-a]
 gi|312872985|ref|ZP_07733045.1| ribosomal protein L35 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874263|ref|ZP_07734297.1| ribosomal protein L35 [Lactobacillus iners LEAF 2052A-d]
 gi|312875626|ref|ZP_07735627.1| ribosomal protein L35 [Lactobacillus iners LEAF 2053A-b]
 gi|315653644|ref|ZP_07906564.1| 50S ribosomal protein L35 [Lactobacillus iners ATCC 55195]
 gi|325912060|ref|ZP_08174458.1| ribosomal protein L35 [Lactobacillus iners UPII 143-D]
 gi|325912690|ref|ZP_08175073.1| ribosomal protein L35 [Lactobacillus iners UPII 60-B]
 gi|329920151|ref|ZP_08276982.1| ribosomal protein L35 [Lactobacillus iners SPIN 1401G]
 gi|259167905|gb|EEW52400.1| 50S ribosomal protein L35 [Lactobacillus iners DSM 13335]
 gi|308164791|gb|EFO67041.1| ribosomal protein L35 [Lactobacillus iners LactinV 11V1-d]
 gi|308165417|gb|EFO67648.1| ribosomal protein L35 [Lactobacillus iners LactinV 09V1-c]
 gi|308166469|gb|EFO68671.1| ribosomal protein L35 [Lactobacillus iners LactinV 03V1-b]
 gi|308168713|gb|EFO70812.1| ribosomal protein L35 [Lactobacillus iners LactinV 01V1-a]
 gi|308169531|gb|EFO71579.1| ribosomal protein L35 [Lactobacillus iners SPIN 2503V10-D]
 gi|311088880|gb|EFQ47323.1| ribosomal protein L35 [Lactobacillus iners LEAF 2053A-b]
 gi|311090333|gb|EFQ48743.1| ribosomal protein L35 [Lactobacillus iners LEAF 2052A-d]
 gi|311091507|gb|EFQ49891.1| ribosomal protein L35 [Lactobacillus iners LEAF 2062A-h1]
 gi|311092754|gb|EFQ51110.1| ribosomal protein L35 [Lactobacillus iners LEAF 3008A-a]
 gi|315489006|gb|EFU78648.1| 50S ribosomal protein L35 [Lactobacillus iners ATCC 55195]
 gi|325476010|gb|EGC79178.1| ribosomal protein L35 [Lactobacillus iners UPII 143-D]
 gi|325478111|gb|EGC81240.1| ribosomal protein L35 [Lactobacillus iners UPII 60-B]
 gi|328936605|gb|EGG33049.1| ribosomal protein L35 [Lactobacillus iners SPIN 1401G]
          Length = 66

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK KT+ +S KRF  TA+G+++   A  G R HG  K+  + +R A     + SA   +
Sbjct: 1  MPKQKTHRASAKRFKKTASGELKRHQAYTGHRFHGKTKKQRRHLRKA----AMVSASDLR 56

Query: 58 VIRNYLPN 65
           IR  L  
Sbjct: 57 RIRQMLSQ 64


>gi|16800962|ref|NP_471230.1| 50S ribosomal protein L35 [Listeria innocua Clip11262]
 gi|16803824|ref|NP_465309.1| 50S ribosomal protein L35 [Listeria monocytogenes EGD-e]
 gi|46908014|ref|YP_014403.1| 50S ribosomal protein L35 [Listeria monocytogenes serotype 4b
          str. F2365]
 gi|47094153|ref|ZP_00231873.1| ribosomal protein L35 [Listeria monocytogenes str. 4b H7858]
 gi|47097524|ref|ZP_00235063.1| ribosomal protein L35 [Listeria monocytogenes str. 1/2a F6854]
 gi|116873221|ref|YP_850002.1| 50S ribosomal protein L35 [Listeria welshimeri serovar 6b str.
          SLCC5334]
 gi|217964068|ref|YP_002349746.1| ribosomal protein L35 [Listeria monocytogenes HCC23]
 gi|224500778|ref|ZP_03669127.1| 50S ribosomal protein L35 [Listeria monocytogenes Finland 1988]
 gi|224503785|ref|ZP_03672092.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL R2-561]
 gi|226224387|ref|YP_002758494.1| ribosomal protein L35 [Listeria monocytogenes Clip81459]
 gi|254826390|ref|ZP_05231391.1| ribosomal protein L35 [Listeria monocytogenes FSL J1-194]
 gi|254829586|ref|ZP_05234273.1| ribosomal protein L35 [Listeria monocytogenes FSL N3-165]
 gi|254832539|ref|ZP_05237194.1| 50S ribosomal protein L35 [Listeria monocytogenes 10403S]
 gi|254854527|ref|ZP_05243875.1| ribosomal protein L35 [Listeria monocytogenes FSL R2-503]
 gi|254901189|ref|ZP_05261113.1| 50S ribosomal protein L35 [Listeria monocytogenes J0161]
 gi|254914078|ref|ZP_05264090.1| 50S ribosomal protein L35 [Listeria monocytogenes J2818]
 gi|254933633|ref|ZP_05266992.1| ribosomal protein L35 [Listeria monocytogenes HPB2262]
 gi|254938392|ref|ZP_05270089.1| ribosomal protein L35 [Listeria monocytogenes F6900]
 gi|254993709|ref|ZP_05275899.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J2-064]
 gi|255028318|ref|ZP_05300269.1| 50S ribosomal protein L35 [Listeria monocytogenes LO28]
 gi|255521084|ref|ZP_05388321.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J1-175]
 gi|284802228|ref|YP_003414093.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5578]
 gi|284995370|ref|YP_003417138.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5923]
 gi|289435124|ref|YP_003464996.1| 50S ribosomal protein L35 [Listeria seeligeri serovar 1/2b str.
          SLCC3954]
 gi|290893088|ref|ZP_06556077.1| ribosomal protein L35 [Listeria monocytogenes FSL J2-071]
 gi|300766430|ref|ZP_07076385.1| ribosomal protein L35 [Listeria monocytogenes FSL N1-017]
 gi|315282774|ref|ZP_07871104.1| ribosomal protein L35 [Listeria marthii FSL S4-120]
 gi|315303673|ref|ZP_07874198.1| ribosomal protein L35 [Listeria ivanovii FSL F6-596]
 gi|54036268|sp|Q71YN4|RL35_LISMF RecName: Full=50S ribosomal protein L35
 gi|61230569|sp|P0A491|RL35_LISMO RecName: Full=50S ribosomal protein L35
 gi|61230578|sp|P0A492|RL35_LISIN RecName: Full=50S ribosomal protein L35
 gi|123461183|sp|A0AJP1|RL35_LISW6 RecName: Full=50S ribosomal protein L35
 gi|254802456|sp|B8DDX3|RL35_LISMH RecName: Full=50S ribosomal protein L35
 gi|259647358|sp|C1KW83|RL35_LISMC RecName: Full=50S ribosomal protein L35
 gi|16411238|emb|CAC99862.1| ribosomal protein L35 [Listeria monocytogenes EGD-e]
 gi|16414397|emb|CAC97126.1| ribosomal protein L35 [Listeria innocua Clip11262]
 gi|46881284|gb|AAT04580.1| ribosomal protein L35 [Listeria monocytogenes serotype 4b str.
          F2365]
 gi|47014107|gb|EAL05101.1| ribosomal protein L35 [Listeria monocytogenes str. 1/2a F6854]
 gi|47017478|gb|EAL08291.1| ribosomal protein L35 [Listeria monocytogenes str. 4b H7858]
 gi|116742099|emb|CAK21223.1| 50S ribosomal protein L35 [Listeria welshimeri serovar 6b str.
          SLCC5334]
 gi|217333338|gb|ACK39132.1| ribosomal protein L35 [Listeria monocytogenes HCC23]
 gi|225876849|emb|CAS05558.1| ribosomal protein L35 [Listeria monocytogenes serotype 4b str.
          CLIP 80459]
 gi|258602003|gb|EEW15328.1| ribosomal protein L35 [Listeria monocytogenes FSL N3-165]
 gi|258607927|gb|EEW20535.1| ribosomal protein L35 [Listeria monocytogenes FSL R2-503]
 gi|258611004|gb|EEW23612.1| ribosomal protein L35 [Listeria monocytogenes F6900]
 gi|284057790|gb|ADB68731.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5578]
 gi|284060837|gb|ADB71776.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5923]
 gi|289171368|emb|CBH27910.1| 50S ribosomal protein L35 [Listeria seeligeri serovar 1/2b str.
          SLCC3954]
 gi|290557448|gb|EFD90973.1| ribosomal protein L35 [Listeria monocytogenes FSL J2-071]
 gi|293585196|gb|EFF97228.1| ribosomal protein L35 [Listeria monocytogenes HPB2262]
 gi|293592098|gb|EFG00433.1| 50S ribosomal protein L35 [Listeria monocytogenes J2818]
 gi|293595630|gb|EFG03391.1| ribosomal protein L35 [Listeria monocytogenes FSL J1-194]
 gi|300512854|gb|EFK39946.1| ribosomal protein L35 [Listeria monocytogenes FSL N1-017]
 gi|307571364|emb|CAR84543.1| ribosomal protein L35 [Listeria monocytogenes L99]
 gi|313608206|gb|EFR84231.1| ribosomal protein L35 [Listeria monocytogenes FSL F2-208]
 gi|313613578|gb|EFR87392.1| ribosomal protein L35 [Listeria marthii FSL S4-120]
 gi|313618352|gb|EFR90388.1| ribosomal protein L35 [Listeria innocua FSL S4-378]
 gi|313623315|gb|EFR93547.1| ribosomal protein L35 [Listeria innocua FSL J1-023]
 gi|313627963|gb|EFR96571.1| ribosomal protein L35 [Listeria ivanovii FSL F6-596]
 gi|313632796|gb|EFR99752.1| ribosomal protein L35 [Listeria seeligeri FSL N1-067]
 gi|313637377|gb|EFS02855.1| ribosomal protein L35 [Listeria seeligeri FSL S4-171]
 gi|328466427|gb|EGF37575.1| 50S ribosomal protein L35 [Listeria monocytogenes 1816]
 gi|328473851|gb|EGF44681.1| 50S ribosomal protein L35 [Listeria monocytogenes 220]
 gi|332312224|gb|EGJ25319.1| Ribosomal protein L35 [Listeria monocytogenes str. Scott A]
          Length = 66

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T +GK++ +     H    +S K  R  R + ++++ D K++
Sbjct: 1  MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKLRKSAMVSAGDFKRI 58


>gi|299830369|ref|YP_003734584.1| ribosomal protein L35 [Kryptoperidinium foliaceum]
 gi|297385071|gb|ADI40369.1| ribosomal protein L35 [Kryptoperidinium foliaceum]
          Length = 64

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT  ++ KR+ +T  G    + A K H ++K+SNK  R     + +  +D
Sbjct: 1  MPKLKTRKAAAKRYKVTGNGNFLRRHAFKGHLLMKKSNKQKRKLSQVLCVKPSD 54


>gi|118411035|ref|YP_874430.1| 50S ribosomal protein L35 [Phaeodactylum tricornutum]
 gi|125987618|sp|A0T0F5|RK35_PHATC RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|116739782|gb|ABK20653.1| 50S ribosomal protein L35 [Phaeodactylum tricornutum]
          Length = 64

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KR+  T T     + A K H ++K+SNK  R    T+ ++ +D K +
Sbjct: 1  MPKLKTRKAAAKRYKRTGTSNFLRRHAFKGHLLMKKSNKQKRKLSQTICVSRSDIKSI 58


>gi|30022649|ref|NP_834280.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 14579]
 gi|30264644|ref|NP_847021.1| 50S ribosomal protein L35 [Bacillus anthracis str. Ames]
 gi|42783751|ref|NP_980998.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10987]
 gi|47530115|ref|YP_021464.1| 50S ribosomal protein L35 [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49187465|ref|YP_030717.1| 50S ribosomal protein L35 [Bacillus anthracis str. Sterne]
 gi|49481333|ref|YP_038620.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|52140933|ref|YP_085895.1| 50S ribosomal protein L35 [Bacillus cereus E33L]
 gi|65321942|ref|ZP_00394901.1| COG0291: Ribosomal protein L35 [Bacillus anthracis str. A2012]
 gi|118479722|ref|YP_896873.1| 50S ribosomal protein L35 [Bacillus thuringiensis str. Al Hakam]
 gi|163942308|ref|YP_001647192.1| 50S ribosomal protein L35 [Bacillus weihenstephanensis KBAB4]
 gi|165871489|ref|ZP_02216136.1| ribosomal protein L35 [Bacillus anthracis str. A0488]
 gi|167641593|ref|ZP_02399840.1| ribosomal protein L35 [Bacillus anthracis str. A0193]
 gi|170708697|ref|ZP_02899135.1| ribosomal protein L35 [Bacillus anthracis str. A0389]
 gi|177653113|ref|ZP_02935400.1| ribosomal protein L35 [Bacillus anthracis str. A0174]
 gi|190569442|ref|ZP_03022322.1| ribosomal protein L35 [Bacillus anthracis Tsiankovskii-I]
 gi|196034330|ref|ZP_03101739.1| ribosomal protein L35 [Bacillus cereus W]
 gi|196047723|ref|ZP_03114925.1| ribosomal protein L35 [Bacillus cereus 03BB108]
 gi|206969688|ref|ZP_03230642.1| 50S ribosomal protein L35 [Bacillus cereus AH1134]
 gi|217962053|ref|YP_002340623.1| 50S ribosomal protein L35 [Bacillus cereus AH187]
 gi|218231773|ref|YP_002369369.1| 50S ribosomal protein L35 [Bacillus cereus B4264]
 gi|218899727|ref|YP_002448138.1| ribosomal protein L35 [Bacillus cereus G9842]
 gi|218905801|ref|YP_002453635.1| ribosomal protein L35 [Bacillus cereus AH820]
 gi|222098036|ref|YP_002532093.1| 50S ribosomal protein l35 [Bacillus cereus Q1]
 gi|225866551|ref|YP_002751929.1| 50S ribosomal protein L35 [Bacillus cereus 03BB102]
 gi|227817358|ref|YP_002817367.1| 50S ribosomal protein L35 [Bacillus anthracis str. CDC 684]
 gi|228903091|ref|ZP_04067227.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 4222]
 gi|228910397|ref|ZP_04074212.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 200]
 gi|228917213|ref|ZP_04080770.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228923317|ref|ZP_04086605.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228929621|ref|ZP_04092639.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228935881|ref|ZP_04098691.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228941752|ref|ZP_04104299.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228948299|ref|ZP_04110582.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228954842|ref|ZP_04116862.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228960842|ref|ZP_04122477.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228967670|ref|ZP_04128691.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228974676|ref|ZP_04135242.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228981270|ref|ZP_04141570.1| 50S ribosomal protein L35 [Bacillus thuringiensis Bt407]
 gi|228987821|ref|ZP_04147930.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228993301|ref|ZP_04153217.1| 50S ribosomal protein L35 [Bacillus pseudomycoides DSM 12442]
 gi|228999354|ref|ZP_04158933.1| 50S ribosomal protein L35 [Bacillus mycoides Rock3-17]
 gi|229006909|ref|ZP_04164539.1| 50S ribosomal protein L35 [Bacillus mycoides Rock1-4]
 gi|229013777|ref|ZP_04170905.1| 50S ribosomal protein L35 [Bacillus mycoides DSM 2048]
 gi|229019798|ref|ZP_04176601.1| 50S ribosomal protein L35 [Bacillus cereus AH1273]
 gi|229027591|ref|ZP_04183809.1| 50S ribosomal protein L35 [Bacillus cereus AH1272]
 gi|229048281|ref|ZP_04193849.1| 50S ribosomal protein L35 [Bacillus cereus AH676]
 gi|229062258|ref|ZP_04199579.1| 50S ribosomal protein L35 [Bacillus cereus AH603]
 gi|229072075|ref|ZP_04205284.1| 50S ribosomal protein L35 [Bacillus cereus F65185]
 gi|229076076|ref|ZP_04209044.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-18]
 gi|229081826|ref|ZP_04214318.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-2]
 gi|229087130|ref|ZP_04219280.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-44]
 gi|229093671|ref|ZP_04224771.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-42]
 gi|229099035|ref|ZP_04229969.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-29]
 gi|229105201|ref|ZP_04235850.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-28]
 gi|229112038|ref|ZP_04241581.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-15]
 gi|229118065|ref|ZP_04247424.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-3]
 gi|229124140|ref|ZP_04253332.1| 50S ribosomal protein L35 [Bacillus cereus 95/8201]
 gi|229129857|ref|ZP_04258823.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-Cer4]
 gi|229135409|ref|ZP_04264197.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST196]
 gi|229141299|ref|ZP_04269837.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST26]
 gi|229147132|ref|ZP_04275491.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST24]
 gi|229152768|ref|ZP_04280951.1| 50S ribosomal protein L35 [Bacillus cereus m1550]
 gi|229158177|ref|ZP_04286244.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 4342]
 gi|229163565|ref|ZP_04291515.1| 50S ribosomal protein L35 [Bacillus cereus R309803]
 gi|229169301|ref|ZP_04297011.1| 50S ribosomal protein L35 [Bacillus cereus AH621]
 gi|229180892|ref|ZP_04308227.1| 50S ribosomal protein L35 [Bacillus cereus 172560W]
 gi|229186830|ref|ZP_04313985.1| 50S ribosomal protein L35 [Bacillus cereus BGSC 6E1]
 gi|229192774|ref|ZP_04319732.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10876]
 gi|229198722|ref|ZP_04325420.1| 50S ribosomal protein L35 [Bacillus cereus m1293]
 gi|229602081|ref|YP_002868853.1| 50S ribosomal protein L35 [Bacillus anthracis str. A0248]
 gi|254686933|ref|ZP_05150791.1| 50S ribosomal protein L35 [Bacillus anthracis str. CNEVA-9066]
 gi|254724497|ref|ZP_05186280.1| 50S ribosomal protein L35 [Bacillus anthracis str. A1055]
 gi|254736682|ref|ZP_05194388.1| 50S ribosomal protein L35 [Bacillus anthracis str. Western North
          America USA6153]
 gi|254741720|ref|ZP_05199407.1| 50S ribosomal protein L35 [Bacillus anthracis str. Kruger B]
 gi|254754683|ref|ZP_05206718.1| 50S ribosomal protein L35 [Bacillus anthracis str. Vollum]
 gi|254757515|ref|ZP_05209542.1| 50S ribosomal protein L35 [Bacillus anthracis str. Australia 94]
 gi|301056080|ref|YP_003794291.1| 50S ribosomal protein L35 [Bacillus anthracis CI]
 gi|54036261|sp|Q6HCV6|RL35_BACHK RecName: Full=50S ribosomal protein L35
 gi|54036272|sp|Q72ZG3|RL35_BACC1 RecName: Full=50S ribosomal protein L35
 gi|54036298|sp|Q817H6|RL35_BACCR RecName: Full=50S ribosomal protein L35
 gi|54036299|sp|Q81L16|RL35_BACAN RecName: Full=50S ribosomal protein L35
 gi|81685963|sp|Q633M2|RL35_BACCZ RecName: Full=50S ribosomal protein L35
 gi|166231156|sp|A0RJH3|RL35_BACAH RecName: Full=50S ribosomal protein L35
 gi|226713817|sp|B7JR81|RL35_BACC0 RecName: Full=50S ribosomal protein L35
 gi|226713818|sp|B7IJX2|RL35_BACC2 RecName: Full=50S ribosomal protein L35
 gi|226713819|sp|B7HF87|RL35_BACC4 RecName: Full=50S ribosomal protein L35
 gi|226713820|sp|B7HRL3|RL35_BACC7 RecName: Full=50S ribosomal protein L35
 gi|226713821|sp|A9VJN7|RL35_BACWK RecName: Full=50S ribosomal protein L35
 gi|254802429|sp|C3PAG3|RL35_BACAA RecName: Full=50S ribosomal protein L35
 gi|254802430|sp|C3L8V2|RL35_BACAC RecName: Full=50S ribosomal protein L35
 gi|254802431|sp|C1EUR8|RL35_BACC3 RecName: Full=50S ribosomal protein L35
 gi|254802432|sp|B9J074|RL35_BACCQ RecName: Full=50S ribosomal protein L35
 gi|29898207|gb|AAP11481.1| LSU ribosomal protein L35P [Bacillus cereus ATCC 14579]
 gi|30259319|gb|AAP28507.1| 50S ribosomal protein L35 [Bacillus anthracis str. Ames]
 gi|42739681|gb|AAS43606.1| ribosomal protein L35 [Bacillus cereus ATCC 10987]
 gi|47505263|gb|AAT33939.1| ribosomal protein L35 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181392|gb|AAT56768.1| ribosomal protein L35 [Bacillus anthracis str. Sterne]
 gi|49332889|gb|AAT63535.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          thuringiensis serovar konkukian str. 97-27]
 gi|51974402|gb|AAU15952.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          cereus E33L]
 gi|118418947|gb|ABK87366.1| LSU ribosomal protein L35P [Bacillus thuringiensis str. Al Hakam]
 gi|163864505|gb|ABY45564.1| ribosomal protein L35 [Bacillus weihenstephanensis KBAB4]
 gi|164712786|gb|EDR18316.1| ribosomal protein L35 [Bacillus anthracis str. A0488]
 gi|167510478|gb|EDR85877.1| ribosomal protein L35 [Bacillus anthracis str. A0193]
 gi|170126377|gb|EDS95266.1| ribosomal protein L35 [Bacillus anthracis str. A0389]
 gi|172081637|gb|EDT66708.1| ribosomal protein L35 [Bacillus anthracis str. A0174]
 gi|190559447|gb|EDV13452.1| ribosomal protein L35 [Bacillus anthracis Tsiankovskii-I]
 gi|195992872|gb|EDX56831.1| ribosomal protein L35 [Bacillus cereus W]
 gi|196021444|gb|EDX60149.1| ribosomal protein L35 [Bacillus cereus 03BB108]
 gi|206735376|gb|EDZ52544.1| 50S ribosomal protein L35 [Bacillus cereus AH1134]
 gi|217066715|gb|ACJ80965.1| ribosomal protein L35 [Bacillus cereus AH187]
 gi|218159730|gb|ACK59722.1| ribosomal protein L35 [Bacillus cereus B4264]
 gi|218536709|gb|ACK89107.1| ribosomal protein L35 [Bacillus cereus AH820]
 gi|218541201|gb|ACK93595.1| ribosomal protein L35 [Bacillus cereus G9842]
 gi|221242094|gb|ACM14804.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          cereus Q1]
 gi|225789009|gb|ACO29226.1| 50S ribosomal protein L35 [Bacillus cereus 03BB102]
 gi|227005507|gb|ACP15250.1| 50S ribosomal protein L35 [Bacillus anthracis str. CDC 684]
 gi|228584744|gb|EEK42864.1| 50S ribosomal protein L35 [Bacillus cereus m1293]
 gi|228590613|gb|EEK48474.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10876]
 gi|228596567|gb|EEK54232.1| 50S ribosomal protein L35 [Bacillus cereus BGSC 6E1]
 gi|228602449|gb|EEK59935.1| 50S ribosomal protein L35 [Bacillus cereus 172560W]
 gi|228614064|gb|EEK71179.1| 50S ribosomal protein L35 [Bacillus cereus AH621]
 gi|228619947|gb|EEK76823.1| 50S ribosomal protein L35 [Bacillus cereus R309803]
 gi|228625135|gb|EEK81895.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 4342]
 gi|228630588|gb|EEK87234.1| 50S ribosomal protein L35 [Bacillus cereus m1550]
 gi|228636381|gb|EEK92852.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST24]
 gi|228642080|gb|EEK98373.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST26]
 gi|228648052|gb|EEL04099.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST196]
 gi|228653548|gb|EEL09420.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-Cer4]
 gi|228659442|gb|EEL15090.1| 50S ribosomal protein L35 [Bacillus cereus 95/8201]
 gi|228665288|gb|EEL20771.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-3]
 gi|228671361|gb|EEL26662.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-15]
 gi|228678127|gb|EEL32355.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-28]
 gi|228684263|gb|EEL38207.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-29]
 gi|228689758|gb|EEL43565.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-42]
 gi|228696198|gb|EEL49033.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-44]
 gi|228701414|gb|EEL53908.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-2]
 gi|228706939|gb|EEL59144.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-18]
 gi|228711009|gb|EEL62975.1| 50S ribosomal protein L35 [Bacillus cereus F65185]
 gi|228716986|gb|EEL68667.1| 50S ribosomal protein L35 [Bacillus cereus AH603]
 gi|228723006|gb|EEL74383.1| 50S ribosomal protein L35 [Bacillus cereus AH676]
 gi|228733710|gb|EEL84486.1| 50S ribosomal protein L35 [Bacillus cereus AH1272]
 gi|228741523|gb|EEL91720.1| 50S ribosomal protein L35 [Bacillus cereus AH1273]
 gi|228747446|gb|EEL97321.1| 50S ribosomal protein L35 [Bacillus mycoides DSM 2048]
 gi|228754309|gb|EEM03724.1| 50S ribosomal protein L35 [Bacillus mycoides Rock1-4]
 gi|228760299|gb|EEM09266.1| 50S ribosomal protein L35 [Bacillus mycoides Rock3-17]
 gi|228766369|gb|EEM15012.1| 50S ribosomal protein L35 [Bacillus pseudomycoides DSM 12442]
 gi|228771869|gb|EEM20326.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228778470|gb|EEM26737.1| 50S ribosomal protein L35 [Bacillus thuringiensis Bt407]
 gi|228785079|gb|EEM33092.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228792046|gb|EEM39627.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228798864|gb|EEM45843.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228804831|gb|EEM51430.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228811286|gb|EEM57624.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228817964|gb|EEM64042.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228823649|gb|EEM69471.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228830008|gb|EEM75627.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228836271|gb|EEM81624.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228842414|gb|EEM87505.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228849163|gb|EEM94002.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 200]
 gi|228856500|gb|EEN01024.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 4222]
 gi|229266489|gb|ACQ48126.1| 50S ribosomal protein L35 [Bacillus anthracis str. A0248]
 gi|300378249|gb|ADK07153.1| 50S ribosomal protein L35 [Bacillus cereus biovar anthracis str.
          CI]
 gi|324328467|gb|ADY23727.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          finitimus YBT-020]
 gi|326942357|gb|AEA18253.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 66

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF  T +GK++   A   H    +S K  R  R   V+++ D K+ IR
Sbjct: 1  MPKQKTHRGAAKRFKKTGSGKLKRSHAYTSHLFANKSTKAKRKLRKAGVVSAGDFKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|3738336|gb|AAC63677.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|20197496|gb|AAM15097.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
          Length = 129

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK
Sbjct: 76  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 112


>gi|24213943|ref|NP_711424.1| 50S ribosomal protein L35 [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45658304|ref|YP_002390.1| 50S ribosomal protein L35 [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|54036271|sp|Q72PK9|RL35_LEPIC RecName: Full=50S ribosomal protein L35
 gi|54036313|sp|Q8F6Q8|RL35_LEPIN RecName: Full=50S ribosomal protein L35
 gi|24194800|gb|AAN48442.1| 50S ribosomal protein L35 [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45601546|gb|AAS71027.1| 50S ribosomal protein L35 [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 67

 Score = 35.0 bits (79), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T   K++ ++   RH + K+  K  R  RG  ++ ++D K ++R
Sbjct: 1  MPKLKTNRAAAKRFKFTKNNKIKRKSMNTRHILTKKGPKRRRRLRGLTLVHNSDWKSIVR 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LMPYGV 66


>gi|145630794|ref|ZP_01786572.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|145634937|ref|ZP_01790644.1| 50S ribosomal protein L35 [Haemophilus influenzae PittAA]
 gi|145636197|ref|ZP_01791867.1| 50S ribosomal protein L35 [Haemophilus influenzae PittHH]
 gi|145641653|ref|ZP_01797230.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|148826024|ref|YP_001290777.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE]
 gi|229845142|ref|ZP_04465277.1| 50S ribosomal protein L35 [Haemophilus influenzae 6P18H1]
 gi|229847478|ref|ZP_04467575.1| 50S ribosomal protein L35 [Haemophilus influenzae 7P49H1]
 gi|260582456|ref|ZP_05850247.1| ribosomal protein L35 [Haemophilus influenzae NT127]
 gi|270675224|ref|ZP_06222664.1| ribosomal protein L35 [Haemophilus influenzae HK1212]
 gi|144983676|gb|EDJ91136.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|145267803|gb|EDK07800.1| 50S ribosomal protein L35 [Haemophilus influenzae PittAA]
 gi|145270719|gb|EDK10652.1| 50S ribosomal protein L35 [Haemophilus influenzae PittHH]
 gi|145273700|gb|EDK13569.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.4-21]
 gi|148716184|gb|ABQ98394.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE]
 gi|229809619|gb|EEP45346.1| 50S ribosomal protein L35 [Haemophilus influenzae 7P49H1]
 gi|229811978|gb|EEP47672.1| 50S ribosomal protein L35 [Haemophilus influenzae 6P18H1]
 gi|260094436|gb|EEW78333.1| ribosomal protein L35 [Haemophilus influenzae NT127]
 gi|270316471|gb|EFA28340.1| ribosomal protein L35 [Haemophilus influenzae HK1212]
 gi|301170067|emb|CBW29671.1| 50S ribosomal protein L35 [Haemophilus influenzae 10810]
          Length = 89

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 83


>gi|78357679|ref|YP_389128.1| 50S ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
 gi|148840422|sp|Q30Y13|RL35_DESDG RecName: Full=50S ribosomal protein L35
 gi|78220084|gb|ABB39433.1| LSU ribosomal protein L35P [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
          Length = 65

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRFS+T +GK + +    RH + K+++K  +   G   L     +K ++
Sbjct: 1  MPKIKTRRCAAKRFSVTGSGKFKRRRKNMRHILTKKASKR-KMQLGQPALVDKTNEKAVK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 RMLP 63


>gi|71066552|ref|YP_265279.1| 50S ribosomal protein L35 [Psychrobacter arcticus 273-4]
 gi|148887096|sp|Q4FQ63|RL35_PSYA2 RecName: Full=50S ribosomal protein L35
 gi|71039537|gb|AAZ19845.1| LSU ribosomal protein L35P [Psychrobacter arcticus 273-4]
          Length = 65

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT S + KRF  TA G  R QA  K H + K+S K IR  RG  ++  +D +  +R  
Sbjct: 4  KMKTRSGAAKRFKKTANGFKRKQAF-KSHILTKKSAKRIRQLRGLKMVDKSD-EAAVRRM 61

Query: 63 LP 64
           P
Sbjct: 62 CP 63


>gi|11467493|ref|NP_043639.1| ribosomal protein L35 [Odontella sinensis]
 gi|1350647|sp|P49567|RK35_ODOSI RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|1185188|emb|CAA91671.1| 50S ribosomal protein L35 [Odontella sinensis]
          Length = 64

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KR+  TATGK   + A K H ++K+S    R     + +++ D+K +
Sbjct: 1  MPKLKTRKAALKRYKKTATGKFLRRHAYKGHLLMKKSKTQKRKLSQIICVSNNDSKPI 58


>gi|237803266|ref|YP_002888460.1| 50S ribosomal protein L35 [Chlamydia trachomatis B/Jali20/OT]
 gi|231274500|emb|CAX11296.1| LSU ribosomal protein L35P [Chlamydia trachomatis B/Jali20/OT]
          Length = 61

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MK+N S   RF +T +G+++   +GKRH + KRS++  RN
Sbjct: 1  MKSNKSVAARFKLTGSGQLKRTRSGKRHKLSKRSSQQKRN 40


>gi|116328738|ref|YP_798458.1| 50S ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116330605|ref|YP_800323.1| 50S ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
 gi|122281640|sp|Q04U55|RL35_LEPBJ RecName: Full=50S ribosomal protein L35
 gi|122283477|sp|Q04ZH0|RL35_LEPBL RecName: Full=50S ribosomal protein L35
 gi|116121482|gb|ABJ79525.1| 50S Ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116124294|gb|ABJ75565.1| 50S Ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
          Length = 67

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T   K++ ++   RH + K+  K  R  RG  ++ ++D K ++R
Sbjct: 1  MPKLKTNRAAAKRFKFTKNNKIKRKSMNTRHILTKKGPKRRRRLRGLTLVNNSDWKSIVR 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LMPYGV 66


>gi|145629398|ref|ZP_01785196.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.1-21]
 gi|145638898|ref|ZP_01794506.1| 50S ribosomal protein L35 [Haemophilus influenzae PittII]
 gi|148826978|ref|YP_001291731.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG]
 gi|260581334|ref|ZP_05849150.1| ribosomal protein L35 [Haemophilus influenzae RdAW]
 gi|319776261|ref|YP_004138749.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3047]
 gi|319897109|ref|YP_004135304.1| 50S ribosomal subunit protein l35 [Haemophilus influenzae F3031]
 gi|329123401|ref|ZP_08251965.1| 50S ribosomal protein L35 [Haemophilus aegyptius ATCC 11116]
 gi|1574779|gb|AAC22964.1| ribosomal protein L35 (rpL35) [Haemophilus influenzae Rd KW20]
 gi|68058187|gb|AAX88440.1| 50S ribosomal protein L35 [Haemophilus influenzae 86-028NP]
 gi|144978241|gb|EDJ88005.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.1-21]
 gi|145271870|gb|EDK11779.1| 50S ribosomal protein L35 [Haemophilus influenzae PittII]
 gi|148718220|gb|ABQ99347.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG]
 gi|260092001|gb|EEW75948.1| ribosomal protein L35 [Haemophilus influenzae RdAW]
 gi|317432613|emb|CBY80974.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3031]
 gi|317450852|emb|CBY87076.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3047]
 gi|327470983|gb|EGF16438.1| 50S ribosomal protein L35 [Haemophilus aegyptius ATCC 11116]
          Length = 89

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 83


>gi|227111543|ref|ZP_03825199.1| 50S ribosomal protein L35 [Pectobacterium carotovorum subsp.
          brasiliensis PBR1692]
 gi|227327043|ref|ZP_03831067.1| 50S ribosomal protein L35 [Pectobacterium carotovorum subsp.
          carotovorum WPP14]
          Length = 65

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGLVSKGDLGLVI 59


>gi|167972618|ref|ZP_02554895.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 5 str. ATCC
          27817]
 gi|167974413|ref|ZP_02556690.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 11 str.
          ATCC 33695]
 gi|167974958|ref|ZP_02557235.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 12 str.
          ATCC 33696]
 gi|167988463|ref|ZP_02570134.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 7 str. ATCC
          27819]
 gi|168362043|ref|ZP_02695222.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 13 str.
          ATCC 33698]
 gi|195867730|ref|ZP_03079731.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 9 str. ATCC
          33175]
 gi|198273327|ref|ZP_03205863.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 4 str. ATCC
          27816]
 gi|209554558|ref|YP_002284627.1| 50S ribosomal protein L35 [Ureaplasma urealyticum serovar 10 str.
          ATCC 33699]
 gi|225550575|ref|ZP_03771524.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 2 str. ATCC
          27814]
 gi|225551083|ref|ZP_03772029.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 8 str. ATCC
          27618]
 gi|226725081|sp|B5ZB37|RL35_UREU1 RecName: Full=50S ribosomal protein L35
 gi|171903494|gb|EDT49783.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 13 str.
          ATCC 33698]
 gi|184209502|gb|EDU06545.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 5 str. ATCC
          27817]
 gi|188018956|gb|EDU56996.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 7 str. ATCC
          27819]
 gi|188997899|gb|EDU66996.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 11 str.
          ATCC 33695]
 gi|195659767|gb|EDX53147.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 12 str.
          ATCC 33696]
 gi|195660585|gb|EDX53841.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 9 str. ATCC
          33175]
 gi|198249847|gb|EDY74627.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 4 str. ATCC
          27816]
 gi|209542059|gb|ACI60288.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 10 str.
          ATCC 33699]
 gi|225378898|gb|EEH01263.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 8 str. ATCC
          27618]
 gi|225379729|gb|EEH02091.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 2 str. ATCC
          27814]
          Length = 64

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          + KT  ++ KRFSIT  GK++ + A + H  + RS K  R+ R   +++++D K+
Sbjct: 5  RQKTKRAAAKRFSITKNGKLKRKHAYRSHLALGRSTKAKRHLRKDAIMSTSDTKR 59


>gi|52307162|gb|AAU37662.1| RpmI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 77

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 13 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 71


>gi|157364202|ref|YP_001470969.1| 50S ribosomal protein L35 [Thermotoga lettingae TMO]
 gi|157314806|gb|ABV33905.1| ribosomal protein L35 [Thermotoga lettingae TMO]
          Length = 67

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 30/58 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMK + ++ KRF IT +GKV    A  RH   KR    +R  R    LA  D K+V R
Sbjct: 5  KMKVSKTASKRFKITKSGKVMFNHARTRHTTGKRRRSALRVLRKKDALAKGDEKRVKR 62


>gi|168060473|ref|XP_001782220.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666313|gb|EDQ52971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 70

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K+K++ +S KRF +T +GK+  + AG+ H + K+S K      G   +   D + VI
Sbjct: 3  KLKSHKASAKRFGVTGSGKITRRCAGRAHLLRKKSTKRKNRLAGKTEVKHCDWQNVI 59


>gi|21674937|ref|NP_663002.1| 50S ribosomal protein L35 [Chlorobium tepidum TLS]
 gi|25091163|sp|Q8KAM8|RL35_CHLTE RecName: Full=50S ribosomal protein L35
 gi|21648166|gb|AAM73344.1| ribosomal protein L35 [Chlorobium tepidum TLS]
          Length = 64

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GKV+ +     H +  ++ K  R    + ++ S   K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKVKRERMNGSHNLEHKNRKRTRRLHQSTLVDSTKEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|160893269|ref|ZP_02074057.1| hypothetical protein CLOL250_00815 [Clostridium sp. L2-50]
 gi|156865352|gb|EDO58783.1| hypothetical protein CLOL250_00815 [Clostridium sp. L2-50]
          Length = 65

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  TA G ++   A K H + K++ K  RN R  + +  +  +KV++
Sbjct: 1  MAKLKTKRAAAKRFKKTANGGLKRSKAYKSHILTKKTTKRKRNLRK-LTMTDSTNEKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|28411206|emb|CAD24034.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 76

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 7  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTK 43


>gi|294464379|gb|ADE77702.1| unknown [Picea sitchensis]
          Length = 167

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
           KMK+ SS K RF    +G +R   AGKRH    +S K  R  R   ++  A AK
Sbjct: 105 KMKSYSSYKFRFRTLTSGLIRRWRAGKRHNAHSKSKKSKRRLRQPAIVTPAYAK 158


>gi|332653951|ref|ZP_08419695.1| ribosomal protein L35 [Ruminococcaceae bacterium D16]
 gi|332517037|gb|EGJ46642.1| ribosomal protein L35 [Ruminococcaceae bacterium D16]
          Length = 69

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)

Query: 1  MPKMK--TNSSSKKRFSITATGKVRAQAAGKRHGM--IKRSNKFIRNARGT 47
          MPK+K  T+S +KKRFS+T +GKV+     KRH +    ++ K  R  RGT
Sbjct: 1  MPKIKIKTHSGAKKRFSLTKSGKVKRAMTKKRHLLNGHGKTTKLKRALRGT 51


>gi|282882472|ref|ZP_06291093.1| ribosomal protein L35 [Peptoniphilus lacrimalis 315-B]
 gi|300813847|ref|ZP_07094152.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 836 str.
          F0141]
 gi|281297614|gb|EFA90089.1| ribosomal protein L35 [Peptoniphilus lacrimalis 315-B]
 gi|300512034|gb|EFK39229.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 836 str.
          F0141]
          Length = 63

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K++ K +R  R + +++  D K++
Sbjct: 1  MGKMKTHRASAKRFKRTGSGKIKRFFAYKGHLTGKKTAKRLRKLRKSSLVSKGDQKRI 58


>gi|161510985|ref|YP_088247.2| 50S ribosomal protein L35 [Mannheimia succiniciproducens MBEL55E]
 gi|118573011|sp|Q65TP8|RL35_MANSM RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|209528096|ref|ZP_03276572.1| ribosomal protein L35 [Arthrospira maxima CS-328]
 gi|209491455|gb|EDZ91834.1| ribosomal protein L35 [Arthrospira maxima CS-328]
          Length = 65

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  S+ +RF +T +GK+  + A K H +  +S    R    T ++   DA+ V
Sbjct: 1  MPKLKTRKSAARRFKVTGSGKLARRKAFKSHLLQHKSATRKRRLSKTTIVDERDAENV 58


>gi|15602468|ref|NP_245540.1| 50S ribosomal protein L35 [Pasteurella multocida subsp. multocida
          str. Pm70]
 gi|16273679|ref|NP_439470.1| 50S ribosomal protein L35 [Haemophilus influenzae Rd KW20]
 gi|32034416|ref|ZP_00134598.1| COG0291: Ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|126207712|ref|YP_001052937.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae L20]
 gi|161761264|ref|YP_249100.2| 50S ribosomal protein L35 [Haemophilus influenzae 86-028NP]
 gi|165975680|ref|YP_001651273.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
 gi|167856597|ref|ZP_02479299.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755]
 gi|190149495|ref|YP_001968020.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
 gi|219871990|ref|YP_002476365.1| 50S ribosomal protein L35 [Haemophilus parasuis SH0165]
 gi|240949009|ref|ZP_04753363.1| 50S ribosomal protein L35 [Actinobacillus minor NM305]
 gi|257465353|ref|ZP_05629724.1| 50S ribosomal protein L35 [Actinobacillus minor 202]
 gi|260914007|ref|ZP_05920481.1| 50S ribosomal protein L35 [Pasteurella dagmatis ATCC 43325]
 gi|303251654|ref|ZP_07337827.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|303252805|ref|ZP_07338965.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
 gi|307245036|ref|ZP_07527131.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|307247209|ref|ZP_07529259.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|307249437|ref|ZP_07531426.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|307251754|ref|ZP_07533657.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|307253990|ref|ZP_07535839.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|307256250|ref|ZP_07538035.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|307258445|ref|ZP_07540184.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|307260682|ref|ZP_07542372.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|307262814|ref|ZP_07544439.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
 gi|325578415|ref|ZP_08148550.1| 50S ribosomal protein L35 [Haemophilus parainfluenzae ATCC 33392]
 gi|54039224|sp|P67916|RL35_PASMU RecName: Full=50S ribosomal protein L35
 gi|54039225|sp|P67917|RL35_HAEIN RecName: Full=50S ribosomal protein L35
 gi|118573009|sp|Q4QKK7|RL35_HAEI8 RecName: Full=50S ribosomal protein L35
 gi|166231148|sp|A3MYU6|RL35_ACTP2 RecName: Full=50S ribosomal protein L35
 gi|226712605|sp|B3H066|RL35_ACTP7 RecName: Full=50S ribosomal protein L35
 gi|226712606|sp|B0BSM7|RL35_ACTPJ RecName: Full=50S ribosomal protein L35
 gi|254802454|sp|B8F7W5|RL35_HAEPS RecName: Full=50S ribosomal protein L35
 gi|12720874|gb|AAK02687.1| RpL35 [Pasteurella multocida subsp. multocida str. Pm70]
 gi|126096504|gb|ABN73332.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 5b str. L20]
 gi|165875781|gb|ABY68829.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
 gi|167852278|gb|EDS23590.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755]
 gi|189914626|gb|ACE60878.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
 gi|219692194|gb|ACL33417.1| 50S ribosomal protein L35 [Haemophilus parasuis SH0165]
 gi|240296596|gb|EER47214.1| 50S ribosomal protein L35 [Actinobacillus minor NM305]
 gi|257451013|gb|EEV25056.1| 50S ribosomal protein L35 [Actinobacillus minor 202]
 gi|260632094|gb|EEX50271.1| 50S ribosomal protein L35 [Pasteurella dagmatis ATCC 43325]
 gi|301156311|emb|CBW15782.1| 50S ribosomal subunit protein L35 [Haemophilus parainfluenzae
          T3T1]
 gi|302648366|gb|EFL78562.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
 gi|302649496|gb|EFL79679.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|306854060|gb|EFM86270.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|306856267|gb|EFM88420.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|306858511|gb|EFM90578.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|306860755|gb|EFM92765.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|306863053|gb|EFM94998.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|306865249|gb|EFM97147.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|306867487|gb|EFM99336.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|306869603|gb|EFN01390.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|306871829|gb|EFN03548.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
 gi|309750874|gb|ADO80858.1| 50S ribosomal protein L35 [Haemophilus influenzae R2866]
 gi|309973159|gb|ADO96360.1| 50S ribosomal protein L35 [Haemophilus influenzae R2846]
 gi|325160151|gb|EGC72280.1| 50S ribosomal protein L35 [Haemophilus parainfluenzae ATCC 33392]
          Length = 65

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|329116572|ref|ZP_08245289.1| ribosomal protein L35 [Streptococcus parauberis NCFD 2020]
 gi|326906977|gb|EGE53891.1| ribosomal protein L35 [Streptococcus parauberis NCFD 2020]
          Length = 66

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATG---KVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK KT+ +S KRF  T +G   + RA  + + HG  K+  + +R A  TMV +S D K+
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKA--TMV-SSGDFKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|152976957|ref|YP_001376474.1| 50S ribosomal protein L35 [Bacillus cereus subsp. cytotoxis NVH
          391-98]
 gi|189042755|sp|A7GTM1|RL35_BACCN RecName: Full=50S ribosomal protein L35
 gi|152025709|gb|ABS23479.1| ribosomal protein L35 [Bacillus cytotoxicus NVH 391-98]
          Length = 66

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF  T +GK++   A   H    +S K  R  R   ++++ D K+ IR
Sbjct: 1  MPKQKTHRGAAKRFKKTGSGKLKRDHAYTSHLFANKSTKAKRKLRKAGLVSAGDYKR-IR 59

Query: 61 NYLPN 65
            L N
Sbjct: 60 QMLDN 64


>gi|113461019|ref|YP_719086.1| 50S ribosomal protein L35 [Haemophilus somnus 129PT]
 gi|170717591|ref|YP_001784675.1| 50S ribosomal protein L35 [Haemophilus somnus 2336]
 gi|123327291|sp|Q0I3J0|RL35_HAES1 RecName: Full=50S ribosomal protein L35
 gi|189042772|sp|B0UU76|RL35_HAES2 RecName: Full=50S ribosomal protein L35
 gi|112823062|gb|ABI25151.1| LSU ribosomal protein L35P [Haemophilus somnus 129PT]
 gi|168825720|gb|ACA31091.1| ribosomal protein L35 [Haemophilus somnus 2336]
          Length = 65

 Score = 34.7 bits (78), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTLRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|22537530|ref|NP_688381.1| 50S ribosomal protein L35 [Streptococcus agalactiae 2603V/R]
 gi|25011495|ref|NP_735890.1| 50S ribosomal protein L35 [Streptococcus agalactiae NEM316]
 gi|76787843|ref|YP_330024.1| 50S ribosomal protein L35 [Streptococcus agalactiae A909]
 gi|76797696|ref|ZP_00779964.1| ribosomal protein L35 [Streptococcus agalactiae 18RS21]
 gi|77407200|ref|ZP_00784174.1| ribosomal protein L35 [Streptococcus agalactiae H36B]
 gi|77414727|ref|ZP_00790856.1| ribosomal protein L35 [Streptococcus agalactiae 515]
 gi|54036309|sp|Q8DYU0|RL35_STRA5 RecName: Full=50S ribosomal protein L35
 gi|54036310|sp|Q8E4E8|RL35_STRA3 RecName: Full=50S ribosomal protein L35
 gi|148887114|sp|Q3K0C9|RL35_STRA1 RecName: Full=50S ribosomal protein L35
 gi|22534411|gb|AAN00254.1|AE014255_12 ribosomal protein L35 [Streptococcus agalactiae 2603V/R]
 gi|24413033|emb|CAD47112.1| 50S ribosomal protein L35 [Streptococcus agalactiae NEM316]
 gi|76562900|gb|ABA45484.1| ribosomal protein L35 [Streptococcus agalactiae A909]
 gi|76586920|gb|EAO63410.1| ribosomal protein L35 [Streptococcus agalactiae 18RS21]
 gi|77159213|gb|EAO70395.1| ribosomal protein L35 [Streptococcus agalactiae 515]
 gi|77174191|gb|EAO77086.1| ribosomal protein L35 [Streptococcus agalactiae H36B]
 gi|319745337|gb|EFV97652.1| 50S ribosomal protein L35 [Streptococcus agalactiae ATCC 13813]
          Length = 66

 Score = 34.3 bits (77), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATG---KVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK KT+ +S KRF  T +G   + RA  + + HG  K+  + +R A  TMV +S D K+
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKA--TMV-SSGDFKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|317052584|ref|YP_004113700.1| 50S ribosomal protein L35 [Desulfurispirillum indicum S5]
 gi|316947668|gb|ADU67144.1| ribosomal protein L35 [Desulfurispirillum indicum S5]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  T +GK+R   A  RH + K+S+K     +   ++A+ D   V R
Sbjct: 1  MYKLKTKRAAAKRFKATGSGKIRRNQAFMRHILTKKSSKRKSQLKNPALVAAVDVPNVKR 60


>gi|152979113|ref|YP_001344742.1| 50S ribosomal protein L35 [Actinobacillus succinogenes 130Z]
 gi|171704319|sp|A6VPB0|RL35_ACTSZ RecName: Full=50S ribosomal protein L35
 gi|150840836|gb|ABR74807.1| ribosomal protein L35 [Actinobacillus succinogenes 130Z]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKAD 54


>gi|74317027|ref|YP_314767.1| 50S ribosomal protein L35P [Thiobacillus denitrificans ATCC
          25259]
 gi|148887125|sp|Q3SK32|RL35_THIDA RecName: Full=50S ribosomal protein L35
 gi|74056522|gb|AAZ96962.1| ribosomal protein L35 [Thiobacillus denitrificans ATCC 25259]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S + KRF     G  +   A  RH + K+S K  R  RG   + +++ K V R
Sbjct: 1  MPKMKSKSGAAKRFRALGGGGFKRSHAFMRHILTKKSTKRKRQLRGMETVNASNHKAVAR 60

Query: 61 NYLP 64
            LP
Sbjct: 61 -MLP 63


>gi|90021226|ref|YP_527053.1| 50S ribosomal protein L35 [Saccharophagus degradans 2-40]
 gi|148887107|sp|Q21KD8|RL35_SACD2 RecName: Full=50S ribosomal protein L35
 gi|89950826|gb|ABD80841.1| LSU ribosomal protein L35P [Saccharophagus degradans 2-40]
          Length = 64

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K KT+S + KRF  TA+G  + + A K H + K + K  R  RGT +L +AD   V R
Sbjct: 1  MSKAKTHSGAAKRFKKTASG-YKHKHAFKSHILTKMTTKRKRQLRGTSLLNAADKPAVDR 59


>gi|161524950|ref|YP_001579962.1| 50S ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
 gi|160342379|gb|ABX15465.1| ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
          Length = 62

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R  L
Sbjct: 1  MKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-RAML 59

Query: 64 P 64
          P
Sbjct: 60 P 60


>gi|329895717|ref|ZP_08271121.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC3088]
 gi|328922193|gb|EGG29548.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC3088]
          Length = 64

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+K +S + KRF  TA G  R ++A K H + K + K  R  RGT ++  AD
Sbjct: 1  MPKVKIHSGAAKRFKKTAGGYKR-KSAYKSHILTKMTTKRKRQLRGTSMIHKAD 53


>gi|284006265|emb|CBA71501.1| 50S ribosomal subunit protein L35 [Arsenophonus nasoniae]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKTMVSKGDLGLVV 59


>gi|315038855|ref|YP_004032423.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1112]
 gi|312276988|gb|ADQ59628.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1112]
          Length = 66

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSCSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|163815465|ref|ZP_02206838.1| hypothetical protein COPEUT_01630 [Coprococcus eutactus ATCC
          27759]
 gi|158449102|gb|EDP26097.1| hypothetical protein COPEUT_01630 [Coprococcus eutactus ATCC
          27759]
 gi|295093748|emb|CBK82839.1| LSU ribosomal protein L35P [Coprococcus sp. ART55/1]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  TA G ++   A K H + K++ K  RN R    +  A  +KV++
Sbjct: 1  MAKLKTKRAAAKRFKKTANGGLKRSKAYKSHILTKKTTKRKRNLRKA-TMTDATNEKVMK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 KILP 63


>gi|284050290|ref|ZP_06380500.1| 50S ribosomal protein L35 [Arthrospira platensis str. Paraca]
 gi|291571455|dbj|BAI93727.1| 50S ribosomal protein L35 [Arthrospira platensis NIES-39]
          Length = 65

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  S+ +RF +T +GK+  + A K H +  +S    R    T ++   DA+ V
Sbjct: 1  MPKLKTRKSAARRFKVTGSGKLARRKAFKSHLLQHKSATRKRRLSKTAIVDERDAENV 58


>gi|168061910|ref|XP_001782928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665600|gb|EDQ52279.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 74

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K+K++ +S KRF +T +GK+  + AG+ H + K+S K      G   +   D + VI
Sbjct: 7  KLKSHKASAKRFGVTGSGKITRRCAGRAHLLRKKSTKRKNRLAGKTEVKHCDWQNVI 63


>gi|132918|sp|P23326|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
           Full=CL35; Flags: Precursor
 gi|189096153|pdb|3BBO|5 Chain 5, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
 gi|170139|gb|AAA34043.1| ribosomal protein L35 [Spinacia oleracea]
          Length = 159

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 91  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTK 127


>gi|262037773|ref|ZP_06011215.1| ribosomal protein L35 [Leptotrichia goodfellowii F0264]
 gi|261748245|gb|EEY35642.1| ribosomal protein L35 [Leptotrichia goodfellowii F0264]
          Length = 68

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MPKMKT+  +KKR  +T +GK+  + +GK H
Sbjct: 1  MPKMKTHRGTKKRVKVTGSGKLVIKHSGKSH 31


>gi|254494956|ref|ZP_01052788.2| 50S ribosomal protein L35 [Polaribacter sp. MED152]
 gi|213690538|gb|EAQ42216.2| 50S ribosomal protein L35 [Polaribacter sp. MED152]
          Length = 62

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRH 31
          MKT SS+KKRF +T TGK++ + A K H
Sbjct: 1  MKTKSSAKKRFKVTGTGKIKRKHAFKSH 28


>gi|166154178|ref|YP_001654296.1| 50S ribosomal protein L35 [Chlamydia trachomatis 434/Bu]
 gi|166155053|ref|YP_001653308.1| 50S ribosomal protein L35 [Chlamydia trachomatis
          L2b/UCH-1/proctitis]
 gi|237805187|ref|YP_002889341.1| 50S ribosomal protein L35 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|270285007|ref|ZP_06194401.1| LSU ribosomal protein L35P [Chlamydia muridarum Nigg]
 gi|270289030|ref|ZP_06195332.1| LSU ribosomal protein L35P [Chlamydia muridarum Weiss]
 gi|165930166|emb|CAP03650.1| LSU ribosomal protein L35P [Chlamydia trachomatis 434/Bu]
 gi|165931041|emb|CAP06604.1| LSU ribosomal protein L35P [Chlamydia trachomatis
          L2b/UCH-1/proctitis]
 gi|231273487|emb|CAX10403.1| LSU ribosomal protein L35P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|289525880|emb|CBJ15362.1| LSU ribosomal protein L35P [Chlamydia trachomatis Sweden2]
          Length = 61

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MK+N S   RF +T +G+++    GKRH + KRS++  RN
Sbjct: 1  MKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRN 40


>gi|94502276|ref|ZP_01308758.1| ribosomal protein L35 [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|161833708|ref|YP_001597904.1| 50S ribosomal subunit protein L35 [Candidatus Sulcia muelleri
          GWSS]
 gi|293977818|ref|YP_003543248.1| 50S ribosomal protein L35P [Candidatus Sulcia muelleri DMIN]
 gi|189042794|sp|A8Z5V7|RL35_SULMW RecName: Full=50S ribosomal protein L35
 gi|94451169|gb|EAT14112.1| ribosomal protein L35 [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|152206198|gb|ABS30508.1| 50S ribosomal subunit protein L35 [Candidatus Sulcia muelleri
          GWSS]
 gi|292667749|gb|ADE35384.1| LSU ribosomal protein L35P [Candidatus Sulcia muelleri DMIN]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 33/65 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF     GK++ + + K H + K+ NK  R       +  +D K + +
Sbjct: 1  MFKLKTKSGAKKRFKFIVNGKIKRKKSFKNHLLTKKENKRKRRLSYFSRVHKSDIKNIKK 60

Query: 61 NYLPN 65
            L N
Sbjct: 61 QLLLN 65


>gi|300114472|ref|YP_003761047.1| 50S ribosomal protein L35 [Nitrosococcus watsonii C-113]
 gi|299540409|gb|ADJ28726.1| ribosomal protein L35 [Nitrosococcus watsonii C-113]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK +   +   H + K+S+K  R  R   V+++AD  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTASGKFKHAQSHHNHILTKKSSKRKRKLRPLAVVSAADGPRLDR 60


>gi|296122749|ref|YP_003630527.1| ribosomal protein L35 [Planctomyces limnophilus DSM 3776]
 gi|296015089|gb|ADG68328.1| ribosomal protein L35 [Planctomyces limnophilus DSM 3776]
          Length = 66

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K KT+    KRF +TA+GK + ++A + H +  +S    R+ R   V+   +AK +I 
Sbjct: 1  MTKQKTHKGMLKRFKVTASGKAKHRSAYRGHLLSHKSGNRKRHLRLDNVVTGPNAKNIIE 60

Query: 61 NYLP 64
             P
Sbjct: 61 GLRP 64


>gi|188533975|ref|YP_001907772.1| 50S ribosomal protein L35 [Erwinia tasmaniensis Et1/99]
 gi|259908576|ref|YP_002648932.1| 50S ribosomal protein L35 [Erwinia pyrifoliae Ep1/96]
 gi|291617249|ref|YP_003519991.1| RpmI [Pantoea ananatis LMG 20103]
 gi|292488131|ref|YP_003531008.1| 50S ribosomal protein L35 [Erwinia amylovora CFBP1430]
 gi|292899342|ref|YP_003538711.1| 50S ribosomal protein L35 [Erwinia amylovora ATCC 49946]
 gi|300716460|ref|YP_003741263.1| 50S ribosomal protein L35 [Erwinia billingiae Eb661]
 gi|300722780|ref|YP_003712071.1| 50S ribosomal subunit protein A [Xenorhabdus nematophila ATCC
          19061]
 gi|304397618|ref|ZP_07379495.1| ribosomal protein L35 [Pantoea sp. aB]
 gi|308186648|ref|YP_003930779.1| 50S ribosomal protein L35 [Pantoea vagans C9-1]
 gi|226725009|sp|B2VEL8|RL35_ERWT9 RecName: Full=50S ribosomal protein L35
 gi|188029017|emb|CAO96885.1| 50S ribosomal protein L35 [Erwinia tasmaniensis Et1/99]
 gi|224964198|emb|CAX55705.1| 50S ribosomal protein L35 [Erwinia pyrifoliae Ep1/96]
 gi|283478545|emb|CAY74461.1| 50S ribosomal protein L35 [Erwinia pyrifoliae DSM 12163]
 gi|291152279|gb|ADD76863.1| RpmI [Pantoea ananatis LMG 20103]
 gi|291199190|emb|CBJ46304.1| 50S ribosomal subunit protein L35 [Erwinia amylovora ATCC 49946]
 gi|291553555|emb|CBA20600.1| 50S ribosomal protein L35 [Erwinia amylovora CFBP1430]
 gi|297629288|emb|CBJ89887.1| 50S ribosomal subunit protein A [Xenorhabdus nematophila ATCC
          19061]
 gi|299062296|emb|CAX59413.1| 50S ribosomal protein L35 [Erwinia billingiae Eb661]
 gi|304354790|gb|EFM19160.1| ribosomal protein L35 [Pantoea sp. aB]
 gi|308057158|gb|ADO09330.1| 50S ribosomal protein L35 [Pantoea vagans C9-1]
 gi|310767524|gb|ADP12474.1| 50S ribosomal protein L35 [Erwinia sp. Ejp617]
 gi|312172263|emb|CBX80520.1| 50S ribosomal protein L35 [Erwinia amylovora ATCC BAA-2158]
 gi|327393703|dbj|BAK11125.1| 50S ribosomal protein L35 RpmI [Pantoea ananatis AJ13355]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVI 59


>gi|294787057|ref|ZP_06752311.1| ribosomal protein L35 [Parascardovia denticolens F0305]
 gi|315226706|ref|ZP_07868494.1| 50S ribosomal protein L35 [Parascardovia denticolens DSM 10105]
 gi|294485890|gb|EFG33524.1| ribosomal protein L35 [Parascardovia denticolens F0305]
 gi|315120838|gb|EFT83970.1| 50S ribosomal protein L35 [Parascardovia denticolens DSM 10105]
          Length = 64

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+NS+  KR   T+ GK+    +  RH +  +S    R      VLA A  KK+
Sbjct: 1  MPKMKSNSALSKRVRTTSKGKMVHNGSAMRHNLENKSASRRRRMSDNKVLAKAQTKKL 58


>gi|224142343|ref|XP_002324518.1| predicted protein [Populus trichocarpa]
 gi|222865952|gb|EEF03083.1| predicted protein [Populus trichocarpa]
          Length = 150

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 81  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTK 117


>gi|33864594|ref|NP_896153.1| 50S ribosomal protein L35 [Synechococcus sp. WH 8102]
 gi|54036287|sp|Q7UA42|RL35_SYNPX RecName: Full=50S ribosomal protein L35
 gi|33632117|emb|CAE06573.1| 50S ribosomal protein L35 [Synechococcus sp. WH 8102]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  ++ K  R+     V+   D  +V+R
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFTRRRAFRNHLLDHKTPKQKRHLATKAVVHETDELRVVR 60


>gi|255574972|ref|XP_002528392.1| 50S ribosomal protein L35, chloroplast precursor, putative [Ricinus
           communis]
 gi|223532180|gb|EEF33985.1| 50S ribosomal protein L35, chloroplast precursor, putative [Ricinus
           communis]
          Length = 134

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 82  KMKTHKASAKRFRVTGKGKIMRRRAGKQHLLAKKNTK 118


>gi|88809304|ref|ZP_01124812.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805]
 gi|88786523|gb|EAR17682.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D ++V
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEERV 58


>gi|315924322|ref|ZP_07920545.1| 50S ribosomal protein L35 [Pseudoramibacter alactolyticus ATCC
          23263]
 gi|315622393|gb|EFV02351.1| 50S ribosomal protein L35 [Pseudoramibacter alactolyticus ATCC
          23263]
          Length = 64

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++  S KRF I  +G ++   A K H + K++ K  R  R    L  ++AK +
Sbjct: 1  MPKMKSHRGSAKRFKIKKSGVIKRAKAYKSHILNKKTQKRKRKLRKAGYLVPSNAKNI 58


>gi|297621145|ref|YP_003709282.1| 50S ribosomal protein L35 [Waddlia chondrophila WSU 86-1044]
 gi|297376446|gb|ADI38276.1| 50S ribosomal protein L35 [Waddlia chondrophila WSU 86-1044]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 23/39 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPK+KT  +   RF +T  GK+  Q  G RH M K++ K
Sbjct: 1  MPKLKTKKAVAARFKLTGKGKLLRQRPGLRHIMTKKTPK 39


>gi|172040802|ref|YP_001800516.1| 50S ribosomal protein L35 [Corynebacterium urealyticum DSM 7109]
 gi|226724987|sp|B1VH41|RL35_CORU7 RecName: Full=50S ribosomal protein L35
 gi|171852106|emb|CAQ05082.1| 50S ribosomal protein L35 [Corynebacterium urealyticum DSM 7109]
          Length = 64

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 35/58 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  +++AD K++ R
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRRERAYRRHLLEGKPSTRTRRLKGTTDVSAADNKRMKR 59


>gi|254361944|ref|ZP_04978075.1| ribosomal protein L35 [Mannheimia haemolytica PHL213]
 gi|261493660|ref|ZP_05990179.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. BOVINE]
 gi|261494327|ref|ZP_05990821.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|153093491|gb|EDN74471.1| ribosomal protein L35 [Mannheimia haemolytica PHL213]
 gi|261309976|gb|EEY11185.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|261310660|gb|EEY11844.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. BOVINE]
          Length = 65

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R  R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQLRHKSMVAKADQVLVV 59


>gi|152991637|ref|YP_001357358.1| 50S ribosomal protein L35 [Sulfurovum sp. NBC37-1]
 gi|166233044|sp|A6Q692|RL35_SULNB RecName: Full=50S ribosomal protein L35
 gi|151423498|dbj|BAF71001.1| 50S ribosomal protein L35 [Sulfurovum sp. NBC37-1]
          Length = 63

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+   + KRF +  +GK++   A + H + K   K  R  R +  + + DAK +
Sbjct: 1  MPKMKSVKGAVKRFKVKKSGKIKRGTAYRSHILTKVDGKHHRQMRSSKHVDTVDAKNI 58


>gi|118483883|gb|ABK93832.1| unknown [Populus trichocarpa]
          Length = 150

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 81  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTK 117


>gi|121997232|ref|YP_001002019.1| ribosomal protein L35 [Halorhodospira halophila SL1]
 gi|166231190|sp|A1WU55|RL35_HALHL RecName: Full=50S ribosomal protein L35
 gi|121588637|gb|ABM61217.1| LSU ribosomal protein L35P [Halorhodospira halophila SL1]
          Length = 64

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF + A+G++    +   H + K+  K  R  R    + ++DA  V R
Sbjct: 1  MPKLKTNRGAAKRFKVKASGRISRARSNHSHILTKKDPKRKRRLRELTEVHASDAPMVRR 60


>gi|78780138|ref|YP_398250.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9312]
 gi|124078997|sp|Q317Y1|RL35_PROM9 RecName: Full=50S ribosomal protein L35
 gi|78713637|gb|ABB50814.1| LSU ribosomal protein L35P [Prochlorococcus marinus str. MIT
          9312]
          Length = 65

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAYHNHLLDHKSSKLKRHLSTKAVVDERDADNV 58


>gi|91201674|emb|CAJ74734.1| strongly similar to 50S ribosomal protein L35 [Candidatus
          Kuenenia stuttgartiensis]
          Length = 65

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +   KKR  ITA GKV    AGK H M  +S +  +  R  + ++   +K + R
Sbjct: 1  MPKLKPHKGLKKRVKITANGKVMRSKAGKSHLMSGKSGRRKQRLRKKIEVSPGFSKNIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 AML 63


>gi|187736046|ref|YP_001878158.1| ribosomal protein L35 [Akkermansia muciniphila ATCC BAA-835]
 gi|187426098|gb|ACD05377.1| ribosomal protein L35 [Akkermansia muciniphila ATCC BAA-835]
          Length = 69

 Score = 33.9 bits (76), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 5  KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLP 64
          KT  +  KRF +T TGKV  +  GKRH + K+S+K  R   G + L        ++  LP
Sbjct: 9  KTRKAVAKRFKVTGTGKVLRRKQGKRHILQKKSSKRKRQL-GKVALVDETQVWAVKQNLP 67


>gi|28411204|emb|CAD24033.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 76

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 7  KMKTHKASAKRFRVTRRGKIVRRCAGKQHLLAKKNTK 43


>gi|225470127|ref|XP_002264584.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 153

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAK 120


>gi|225155467|ref|ZP_03723958.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
 gi|224803768|gb|EEG22000.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
          Length = 64

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 5  KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLP 64
          KT  S  KRF IT TGK+  +  G RH +  +S K  R A    ++A   A   ++  LP
Sbjct: 3  KTKKSISKRFKITGTGKMLRRTPGFRHLLASKSTKSKRRASKDKLVAPGHA-AALKQCLP 61

Query: 65 NGI 67
           G+
Sbjct: 62 FGL 64


>gi|288553675|ref|YP_003425610.1| 50S ribosomal protein L35 [Bacillus pseudofirmus OF4]
 gi|288544835|gb|ADC48718.1| 50S ribosomal protein L35 [Bacillus pseudofirmus OF4]
          Length = 66

 Score = 33.9 bits (76), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T +GK++       H    +S K  R  R + ++ S D K++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAHGFTSHLFGNKSQKQKRKLRKSAIVHSGDFKRI 58


>gi|126697189|ref|YP_001092075.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9301]
 gi|254526079|ref|ZP_05138131.1| ribosomal protein L35 [Prochlorococcus marinus str. MIT 9202]
 gi|166199816|sp|A3PFE9|RL35_PROM0 RecName: Full=50S ribosomal protein L35
 gi|126544232|gb|ABO18474.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9301]
 gi|221537503|gb|EEE39956.1| ribosomal protein L35 [Prochlorococcus marinus str. MIT 9202]
          Length = 65

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAFHNHLLDHKSSKLKRHLSTKAVVDERDADNV 58


>gi|116074341|ref|ZP_01471603.1| 50S ribosomal protein L35 [Synechococcus sp. RS9916]
 gi|116069646|gb|EAU75398.1| 50S ribosomal protein L35 [Synechococcus sp. RS9916]
          Length = 85

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D ++V
Sbjct: 21 MPKLKTRKAAAKRFKATGTGKFMRRRAFRNHLLDHKSPKLKRHLGTKAVVDRTDEERV 78


>gi|13357788|ref|NP_078062.1| ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          700970]
 gi|167972005|ref|ZP_02554282.1| ribosomal protein L35 [Ureaplasma parvum serovar 6 str. ATCC
          27818]
 gi|168282375|ref|ZP_02690042.1| ribosomal protein L35 [Ureaplasma parvum serovar 14 str. ATCC
          33697]
 gi|168308529|ref|ZP_02691204.1| ribosomal protein L35 [Ureaplasma parvum serovar 1 str. ATCC
          27813]
 gi|170762449|ref|YP_001752311.1| 50S ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          27815]
 gi|20139830|sp|Q9PQR3|RL35_UREPA RecName: Full=50S ribosomal protein L35
 gi|189042795|sp|B1AIL7|RL35_UREP2 RecName: Full=50S ribosomal protein L35
 gi|11357034|pir||E82914 ribosomal protein L35 UU228 [imported] - Ureaplasma urealyticum
 gi|6899198|gb|AAF30637.1|AE002122_6 ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          700970]
 gi|168828026|gb|ACA33288.1| ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          27815]
 gi|171902605|gb|EDT48894.1| ribosomal protein L35 [Ureaplasma parvum serovar 1 str. ATCC
          27813]
 gi|182675772|gb|EDT87677.1| ribosomal protein L35 [Ureaplasma parvum serovar 14 str. ATCC
          33697]
 gi|186700712|gb|EDU18994.1| ribosomal protein L35 [Ureaplasma parvum serovar 6 str. ATCC
          27818]
          Length = 64

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          + KT  +  KRFSIT  GK++ + A + H  + RS K  R+ R   +++++D K+
Sbjct: 5  RQKTKRAVAKRFSITKNGKLKRKHAYRSHLALGRSTKAKRHLRKDAIMSTSDTKR 59


>gi|227877777|ref|ZP_03995810.1| 50S ribosomal protein L35 [Lactobacillus crispatus JV-V01]
 gi|256843628|ref|ZP_05549116.1| 50S ribosomal protein L35 [Lactobacillus crispatus 125-2-CHN]
 gi|256850104|ref|ZP_05555534.1| 50s ribosomal RL35 [Lactobacillus crispatus MV-1A-US]
 gi|262047392|ref|ZP_06020349.1| 50S ribosomal protein L35 [Lactobacillus crispatus MV-3A-US]
 gi|293380737|ref|ZP_06626785.1| 50S ribosomal protein L35 [Lactobacillus crispatus 214-1]
 gi|295693378|ref|YP_003601988.1| 50S ribosomal protein l35 [Lactobacillus crispatus ST1]
 gi|227862636|gb|EEJ70122.1| 50S ribosomal protein L35 [Lactobacillus crispatus JV-V01]
 gi|256615048|gb|EEU20249.1| 50S ribosomal protein L35 [Lactobacillus crispatus 125-2-CHN]
 gi|256713076|gb|EEU28067.1| 50s ribosomal RL35 [Lactobacillus crispatus MV-1A-US]
 gi|260572366|gb|EEX28929.1| 50S ribosomal protein L35 [Lactobacillus crispatus MV-3A-US]
 gi|290922701|gb|EFD99655.1| 50S ribosomal protein L35 [Lactobacillus crispatus 214-1]
 gi|295031484|emb|CBL50963.1| 50S ribosomal protein L35 [Lactobacillus crispatus ST1]
          Length = 66

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSKSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|15900837|ref|NP_345441.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TIGR4]
 gi|15902906|ref|NP_358456.1| 50S ribosomal protein L35 [Streptococcus pneumoniae R6]
 gi|111658039|ref|ZP_01408741.1| hypothetical protein SpneT_02000772 [Streptococcus pneumoniae
          TIGR4]
 gi|116516458|ref|YP_816330.1| 50S ribosomal protein L35 [Streptococcus pneumoniae D39]
 gi|148984702|ref|ZP_01817970.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP3-BS71]
 gi|148988400|ref|ZP_01819847.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP6-BS73]
 gi|148992905|ref|ZP_01822524.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP9-BS68]
 gi|148998605|ref|ZP_01826045.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP11-BS70]
 gi|149002510|ref|ZP_01827444.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS69]
 gi|149006364|ref|ZP_01830076.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP18-BS74]
 gi|149010394|ref|ZP_01831765.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP19-BS75]
 gi|149019551|ref|ZP_01834870.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP23-BS72]
 gi|168483030|ref|ZP_02707982.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1873-00]
 gi|168485912|ref|ZP_02710420.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1087-00]
 gi|168490221|ref|ZP_02714420.1| ribosomal protein L35 [Streptococcus pneumoniae SP195]
 gi|168491049|ref|ZP_02715192.1| ribosomal protein L35 [Streptococcus pneumoniae CDC0288-04]
 gi|168494389|ref|ZP_02718532.1| ribosomal protein L35 [Streptococcus pneumoniae CDC3059-06]
 gi|168575622|ref|ZP_02721558.1| ribosomal protein L35 [Streptococcus pneumoniae MLV-016]
 gi|169833003|ref|YP_001694405.1| 50S ribosomal protein L35 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683906|ref|YP_001835653.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CGSP14]
 gi|194396802|ref|YP_002037595.1| 50S ribosomal protein L35 [Streptococcus pneumoniae G54]
 gi|221231723|ref|YP_002510875.1| 50S ribosomal protein L35 [Streptococcus pneumoniae ATCC 700669]
 gi|225854464|ref|YP_002735976.1| 50S ribosomal protein L35 [Streptococcus pneumoniae JJA]
 gi|225856618|ref|YP_002738129.1| 50S ribosomal protein L35 [Streptococcus pneumoniae P1031]
 gi|225858753|ref|YP_002740263.1| 50S ribosomal protein L35 [Streptococcus pneumoniae 70585]
 gi|225861153|ref|YP_002742662.1| 50S ribosomal protein L35 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650890|ref|ZP_04525142.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CCRI 1974]
 gi|237821899|ref|ZP_04597744.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CCRI 1974M2]
 gi|289167803|ref|YP_003446072.1| 50S ribosomal protein L35 [Streptococcus mitis B6]
 gi|298229846|ref|ZP_06963527.1| 50S ribosomal protein L35 [Streptococcus pneumoniae str. Canada
          MDR_19F]
 gi|298254545|ref|ZP_06978131.1| 50S ribosomal protein L35 [Streptococcus pneumoniae str. Canada
          MDR_19A]
 gi|298503030|ref|YP_003724970.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TCH8431/19A]
 gi|303254428|ref|ZP_07340534.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS455]
 gi|303259872|ref|ZP_07345847.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP-BS293]
 gi|303262286|ref|ZP_07348230.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS292]
 gi|303264708|ref|ZP_07350626.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS397]
 gi|303267237|ref|ZP_07353102.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS457]
 gi|303269523|ref|ZP_07355288.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS458]
 gi|307067617|ref|YP_003876583.1| hypothetical protein SPAP_0992 [Streptococcus pneumoniae AP200]
 gi|307127489|ref|YP_003879520.1| 50S ribosomal protein L35 [Streptococcus pneumoniae 670-6B]
 gi|307704690|ref|ZP_07641589.1| ribosomal protein L35 [Streptococcus mitis SK597]
 gi|307706458|ref|ZP_07643267.1| ribosomal protein L35 [Streptococcus mitis SK321]
 gi|307708592|ref|ZP_07645056.1| ribosomal protein L35 [Streptococcus mitis NCTC 12261]
 gi|307709141|ref|ZP_07645600.1| ribosomal protein L35 [Streptococcus mitis SK564]
 gi|322376454|ref|ZP_08050947.1| ribosomal protein L35 [Streptococcus sp. M334]
 gi|54039208|sp|P66279|RL35_STRR6 RecName: Full=50S ribosomal protein L35
 gi|54041904|sp|P66278|RL35_STRPN RecName: Full=50S ribosomal protein L35
 gi|122278784|sp|Q04KW8|RL35_STRP2 RecName: Full=50S ribosomal protein L35
 gi|226725070|sp|B5E479|RL35_STRP4 RecName: Full=50S ribosomal protein L35
 gi|226725071|sp|B1IBC0|RL35_STRPI RecName: Full=50S ribosomal protein L35
 gi|226725072|sp|B2IPB4|RL35_STRPS RecName: Full=50S ribosomal protein L35
 gi|254799881|sp|C1CDV5|RL35_STRZJ RecName: Full=50S ribosomal protein L35
 gi|254799882|sp|C1CK41|RL35_STRZP RecName: Full=50S ribosomal protein L35
 gi|254799883|sp|C1CRU0|RL35_STRZT RecName: Full=50S ribosomal protein L35
 gi|254802471|sp|C1C6T7|RL35_STRP7 RecName: Full=50S ribosomal protein L35
 gi|254802472|sp|B8ZP57|RL35_STRPJ RecName: Full=50S ribosomal protein L35
 gi|14972434|gb|AAK75081.1| ribosomal protein L35 [Streptococcus pneumoniae TIGR4]
 gi|15458466|gb|AAK99666.1| 50S Ribosomal protein L35 [Streptococcus pneumoniae R6]
 gi|116077034|gb|ABJ54754.1| ribosomal protein L35 [Streptococcus pneumoniae D39]
 gi|147755603|gb|EDK62650.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP11-BS70]
 gi|147759447|gb|EDK66439.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS69]
 gi|147762141|gb|EDK69103.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP18-BS74]
 gi|147764875|gb|EDK71804.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP19-BS75]
 gi|147923093|gb|EDK74208.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP3-BS71]
 gi|147926081|gb|EDK77155.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP6-BS73]
 gi|147928357|gb|EDK79373.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP9-BS68]
 gi|147930926|gb|EDK81906.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP23-BS72]
 gi|168995505|gb|ACA36117.1| ribosomal protein L35 [Streptococcus pneumoniae Hungary19A-6]
 gi|172043549|gb|EDT51595.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1873-00]
 gi|182629240|gb|ACB90188.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CGSP14]
 gi|183571041|gb|EDT91569.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1087-00]
 gi|183571431|gb|EDT91959.1| ribosomal protein L35 [Streptococcus pneumoniae SP195]
 gi|183574542|gb|EDT95070.1| ribosomal protein L35 [Streptococcus pneumoniae CDC0288-04]
 gi|183575648|gb|EDT96176.1| ribosomal protein L35 [Streptococcus pneumoniae CDC3059-06]
 gi|183578500|gb|EDT99028.1| ribosomal protein L35 [Streptococcus pneumoniae MLV-016]
 gi|194356469|gb|ACF54917.1| ribosomal protein L35 [Streptococcus pneumoniae G54]
 gi|220674183|emb|CAR68711.1| 50S ribosomal protein L35 [Streptococcus pneumoniae ATCC 700669]
 gi|225721894|gb|ACO17748.1| ribosomal protein L35 [Streptococcus pneumoniae 70585]
 gi|225724223|gb|ACO20076.1| ribosomal protein L35 [Streptococcus pneumoniae JJA]
 gi|225724393|gb|ACO20245.1| ribosomal protein L35 [Streptococcus pneumoniae P1031]
 gi|225728339|gb|ACO24190.1| ribosomal protein L35 [Streptococcus pneumoniae Taiwan19F-14]
 gi|288907370|emb|CBJ22207.1| 50S ribosomal protein L35 [Streptococcus mitis B6]
 gi|298238625|gb|ADI69756.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TCH8431/19A]
 gi|301794098|emb|CBW36504.1| 50S ribosomal protein L35 [Streptococcus pneumoniae INV104]
 gi|301799936|emb|CBW32519.1| 50S ribosomal protein L35 [Streptococcus pneumoniae OXC141]
 gi|301801803|emb|CBW34514.1| 50S ribosomal protein L35 [Streptococcus pneumoniae INV200]
 gi|302598595|gb|EFL65635.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS455]
 gi|302636609|gb|EFL67100.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS292]
 gi|302639077|gb|EFL69537.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP-BS293]
 gi|302640959|gb|EFL71341.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS458]
 gi|302643246|gb|EFL73528.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS457]
 gi|302645795|gb|EFL76024.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS397]
 gi|306409154|gb|ADM84581.1| hypothetical protein SPAP_0992 [Streptococcus pneumoniae AP200]
 gi|306484551|gb|ADM91420.1| ribosomal protein L35 [Streptococcus pneumoniae 670-6B]
 gi|307615341|gb|EFN94550.1| ribosomal protein L35 [Streptococcus mitis NCTC 12261]
 gi|307618168|gb|EFN97326.1| ribosomal protein L35 [Streptococcus mitis SK321]
 gi|307620087|gb|EFN99204.1| ribosomal protein L35 [Streptococcus mitis SK564]
 gi|307621737|gb|EFO00775.1| ribosomal protein L35 [Streptococcus mitis SK597]
 gi|321282261|gb|EFX59268.1| ribosomal protein L35 [Streptococcus sp. M334]
 gi|327389238|gb|EGE87583.1| ribosomal protein L35 [Streptococcus pneumoniae GA04375]
 gi|332073293|gb|EGI83772.1| ribosomal protein L35 [Streptococcus pneumoniae GA17570]
 gi|332075576|gb|EGI86044.1| ribosomal protein L35 [Streptococcus pneumoniae GA17545]
 gi|332076234|gb|EGI86700.1| ribosomal protein L35 [Streptococcus pneumoniae GA41301]
 gi|332201426|gb|EGJ15496.1| ribosomal protein L35 [Streptococcus pneumoniae GA47368]
 gi|332202815|gb|EGJ16884.1| ribosomal protein L35 [Streptococcus pneumoniae GA41317]
 gi|332204963|gb|EGJ19028.1| ribosomal protein L35 [Streptococcus pneumoniae GA47901]
          Length = 66

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATG---KVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK KT+ +S KRF  T +G   + RA  + + HG  K+  + +R A  +MV  S D K+
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKA--SMV-HSGDYKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|297821677|ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
 gi|297324560|gb|EFH54980.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
          Length = 140

 Score = 33.9 bits (76), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           K+KT+ +S KRF +T  GK+  + +GK+H + K++NK
Sbjct: 71  KLKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 107


>gi|304439756|ref|ZP_07399654.1| 50S ribosomal protein L35 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371743|gb|EFM25351.1| 50S ribosomal protein L35 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 63

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K+++K  R  R + V++  D +++
Sbjct: 1  MAKMKTHRASAKRFKRTGSGKIKRFFAFKGHLTGKKTSKRKRKLRKSAVVSKGDQRRI 58


>gi|115469208|ref|NP_001058203.1| Os06g0647100 [Oryza sativa Japonica Group]
 gi|51535422|dbj|BAD37321.1| putative 50S ribosomal protein L35 [Oryza sativa Japonica Group]
 gi|51535644|dbj|BAD37618.1| putative 50S ribosomal protein L35 [Oryza sativa Japonica Group]
 gi|113596243|dbj|BAF20117.1| Os06g0647100 [Oryza sativa Japonica Group]
 gi|125556272|gb|EAZ01878.1| hypothetical protein OsI_23900 [Oryza sativa Indica Group]
 gi|125598039|gb|EAZ37819.1| hypothetical protein OsJ_22158 [Oryza sativa Japonica Group]
 gi|215694957|dbj|BAG90148.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 146

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 77  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLSKKNTK 113


>gi|295397490|ref|ZP_06807573.1| 50S ribosomal protein L35 [Aerococcus viridans ATCC 11563]
 gi|294974290|gb|EFG50034.1| 50S ribosomal protein L35 [Aerococcus viridans ATCC 11563]
          Length = 66

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+ +S KRF  TA+GK++   + + H    ++ K  R  +    + S D K++
Sbjct: 1  MPKQKTHRASVKRFKKTASGKLKRSHSERSHRFHGKTKKQRRQHKQATTVHSTDIKRI 58


>gi|225470652|ref|XP_002267813.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147785813|emb|CAN77631.1| hypothetical protein VITISV_001803 [Vitis vinifera]
 gi|147799145|emb|CAN63703.1| hypothetical protein VITISV_039205 [Vitis vinifera]
          Length = 153

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAK 120


>gi|123967084|ref|YP_001012165.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9515]
 gi|123969402|ref|YP_001010260.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. AS9601]
 gi|157414267|ref|YP_001485133.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9215]
 gi|166199819|sp|A2BZ47|RL35_PROM5 RecName: Full=50S ribosomal protein L35
 gi|166199820|sp|A2BTP2|RL35_PROMS RecName: Full=50S ribosomal protein L35
 gi|166988036|sp|A8G7G6|RL35_PROM2 RecName: Full=50S ribosomal protein L35
 gi|123199512|gb|ABM71153.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. AS9601]
 gi|123201450|gb|ABM73058.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9515]
 gi|157388842|gb|ABV51547.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9215]
          Length = 65

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAFHNHLLDHKSSKLKRHLSTKAVVDERDADNV 58


>gi|87122882|ref|ZP_01078750.1| ribosomal protein L35 [Marinomonas sp. MED121]
 gi|86161833|gb|EAQ63130.1| ribosomal protein L35 [Marinomonas sp. MED121]
          Length = 64

 Score = 33.9 bits (76), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++S + KRF  TA G  + + +   H + K+S K  R+ R    +A++DA  + R
Sbjct: 1  MPKIKSHSGASKRFQRTANG-FKHKQSHTSHILTKKSTKRKRHLRSLNQVAASDAPLITR 59


>gi|284991465|ref|YP_003410019.1| 50S ribosomal protein L35 [Geodermatophilus obscurus DSM 43160]
 gi|284064710|gb|ADB75648.1| ribosomal protein L35 [Geodermatophilus obscurus DSM 43160]
          Length = 64

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+  + KR  +T +GK+  + A  +H    +S++  R      V++ AD K +
Sbjct: 1  MPKQKTHKGTAKRVRVTGSGKLMREQANNQHKFEHKSSRRKRRLDQDQVISPADTKSL 58


>gi|161507856|ref|YP_001577820.1| 50S ribosomal protein L35 [Lactobacillus helveticus DPC 4571]
 gi|260103149|ref|ZP_05753386.1| conserved hypothetical protein [Lactobacillus helveticus DSM
          20075]
 gi|172048342|sp|A8YWD3|RL35_LACH4 RecName: Full=50S ribosomal protein L35
 gi|160348845|gb|ABX27519.1| 50S ribosomal protein L35 [Lactobacillus helveticus DPC 4571]
 gi|260083059|gb|EEW67179.1| conserved hypothetical protein [Lactobacillus helveticus DSM
          20075]
 gi|328464798|gb|EGF36113.1| 50S ribosomal protein L35 [Lactobacillus helveticus MTCC 5463]
          Length = 66

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSRSDIKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|172058198|ref|YP_001814658.1| 50S ribosomal protein L35 [Exiguobacterium sibiricum 255-15]
 gi|226725011|sp|B1YK03|RL35_EXIS2 RecName: Full=50S ribosomal protein L35
 gi|171990719|gb|ACB61641.1| ribosomal protein L35 [Exiguobacterium sibiricum 255-15]
          Length = 64

 Score = 33.5 bits (75), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++  + KRF  TA+GK++   A   H    +S K  R  R   +++S D K++
Sbjct: 1  MPKMKSHRGASKRFKRTASGKLKRGRAYTSHLFGNKSTKAKRKLRKASMVSSGDFKRI 58


>gi|299144127|ref|ZP_07037207.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 386 str.
          F0131]
 gi|298518612|gb|EFI42351.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 386 str.
          F0131]
          Length = 63

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K++ K +R  R + +++  D +++
Sbjct: 1  MGKMKTHRASAKRFKRTGSGKLKRGYAFKGHLTGKKTAKRLRKLRKSSLVSKGDQRRI 58


>gi|227510528|ref|ZP_03940577.1| ribosomal protein L35 [Lactobacillus brevis subsp. gravesensis
          ATCC 27305]
 gi|227513537|ref|ZP_03943586.1| ribosomal protein L35 [Lactobacillus buchneri ATCC 11577]
 gi|227524680|ref|ZP_03954729.1| ribosomal protein L35 [Lactobacillus hilgardii ATCC 8290]
 gi|227083410|gb|EEI18722.1| ribosomal protein L35 [Lactobacillus buchneri ATCC 11577]
 gi|227088164|gb|EEI23476.1| ribosomal protein L35 [Lactobacillus hilgardii ATCC 8290]
 gi|227190180|gb|EEI70247.1| ribosomal protein L35 [Lactobacillus brevis subsp. gravesensis
          ATCC 27305]
          Length = 64

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++   + K
Sbjct: 1  MPKQKTNRAAAKRFKKTANGGIKSAHAYTSHRFHGKTKKQRRQLRGTHMMDHTNLK 56


>gi|295425301|ref|ZP_06818004.1| 50S ribosomal protein L35 [Lactobacillus amylolyticus DSM 11664]
 gi|295065077|gb|EFG55982.1| 50S ribosomal protein L35 [Lactobacillus amylolyticus DSM 11664]
          Length = 66

 Score = 33.5 bits (75), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSRSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|227892827|ref|ZP_04010632.1| ribosomal protein L35 [Lactobacillus ultunensis DSM 16047]
 gi|227865329|gb|EEJ72750.1| ribosomal protein L35 [Lactobacillus ultunensis DSM 16047]
          Length = 66

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSRSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|254369557|ref|ZP_04985568.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FSC022]
 gi|157122511|gb|EDO66646.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FSC022]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S + KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSGAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTNSLVQ 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|171911359|ref|ZP_02926829.1| ribosomal protein L35 [Verrucomicrobium spinosum DSM 4136]
          Length = 69

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 5  KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KT  +  KRF IT TGKV  +  GKRH +  +S K  R+   T+++   DA  V
Sbjct: 9  KTRKAVSKRFKITGTGKVLRRRQGKRHLLQNKSRKRKRSLGKTVLVDHTDAAAV 62


>gi|323466109|gb|ADX69796.1| 50S ribosomal protein L35 [Lactobacillus helveticus H10]
          Length = 66

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAA--GKR-HGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT+ +S KRF  TA G ++   A  G R HG  K+  + +R A    +++ +D K+
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKA---AMVSRSDMKR 57

Query: 58 V 58
          +
Sbjct: 58 I 58


>gi|254508883|ref|ZP_05120992.1| ribosomal protein L35 [Vibrio parahaemolyticus 16]
 gi|219548197|gb|EED25213.1| ribosomal protein L35 [Vibrio parahaemolyticus 16]
          Length = 61

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 56


>gi|148238395|ref|YP_001223782.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7803]
 gi|166233046|sp|A5GHS0|RL35_SYNPW RecName: Full=50S ribosomal protein L35
 gi|147846934|emb|CAK22485.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7803]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D  +V
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEDRV 58


>gi|242278819|ref|YP_002990948.1| 50S ribosomal protein L35 [Desulfovibrio salexigens DSM 2638]
 gi|259647349|sp|C6BRG9|RL35_DESAD RecName: Full=50S ribosomal protein L35
 gi|242121713|gb|ACS79409.1| ribosomal protein L35 [Desulfovibrio salexigens DSM 2638]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPKMKT   + KRF+ T +GK + +  G RH + K++ K
Sbjct: 1  MPKMKTRRGAAKRFAKTGSGKFKRRKQGLRHILTKKTAK 39


>gi|253989348|ref|YP_003040704.1| 50S ribosomal protein L35 [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
 gi|290475545|ref|YP_003468433.1| 50S ribosomal subunit protein A [Xenorhabdus bovienii SS-2004]
 gi|317047870|ref|YP_004115518.1| 50S ribosomal protein L35 [Pantoea sp. At-9b]
 gi|329296185|ref|ZP_08253521.1| 50S ribosomal protein L35 [Plautia stali symbiont]
 gi|253780798|emb|CAQ83960.1| 50s ribosomal protein l35 [Photorhabdus asymbiotica]
 gi|289174866|emb|CBJ81667.1| 50S ribosomal subunit protein A [Xenorhabdus bovienii SS-2004]
 gi|316949487|gb|ADU68962.1| ribosomal protein L35 [Pantoea sp. At-9b]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVV 59


>gi|238898887|ref|YP_002924569.1| 50S ribosomal subunit protein L35 [Candidatus Hamiltonella
          defensa 5AT (Acyrthosiphon pisum)]
 gi|259647357|sp|C4K778|RL35_HAMD5 RecName: Full=50S ribosomal protein L35
 gi|229466647|gb|ACQ68421.1| 50S ribosomal subunit protein L35 [Candidatus Hamiltonella
          defensa 5AT (Acyrthosiphon pisum)]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT  ++ KRF  TA+G  + + A  RH + K+S K  R  R   +++  D   V+
Sbjct: 1  MPKIKTVRAAAKRFKKTASGGFKRKHAYLRHILTKKSTKRKRQLRPKGLVSQNDIASVV 59


>gi|225848299|ref|YP_002728462.1| 50S ribosomal protein L35 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643050|gb|ACN98100.1| ribosomal protein L35 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 67

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN ++ KR  ITA GKV+    G  H   K+S+K  R  R           K ++  
Sbjct: 5  KMKTNRTAAKRLKITAKGKVKYTKGGVSHYNTKKSSKRKRQGRRPQYAPKCIEHK-LKAL 63

Query: 63 LPN 65
          LPN
Sbjct: 64 LPN 66


>gi|145298935|ref|YP_001141776.1| 50S ribosomal protein L35 [Aeromonas salmonicida subsp.
          salmonicida A449]
 gi|166231150|sp|A4SMA6|RL35_AERS4 RecName: Full=50S ribosomal protein L35
 gi|142851707|gb|ABO90028.1| ribosomal protein L35 [Aeromonas salmonicida subsp. salmonicida
          A449]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R      ++++AD K+V+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRKLGPKFMVSAADHKRVV 59


>gi|126667902|ref|ZP_01738867.1| ribosomal protein L35 [Marinobacter sp. ELB17]
 gi|126627562|gb|EAZ98194.1| ribosomal protein L35 [Marinobacter sp. ELB17]
          Length = 65

 Score = 33.5 bits (75), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT S + KRF  TATG  + +++   H + K+S K  R  RGT +++ +D   V R
Sbjct: 5  KMKTKSGAAKRFKKTATG-FKHKSSFTSHILTKKSPKRKRQLRGTKLISKSDVASVKR 61


>gi|299830574|ref|YP_003735022.1| 50S ribosomal protein L35 [Durinskia baltica]
 gi|297384938|gb|ADI40237.1| 50S ribosomal protein L35 [Durinskia baltica]
          Length = 64

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+ IT       + A K H ++ +SNK  R     + +  +D  K I+
Sbjct: 1  MPKLKTRKAAAKRYKITGNDNFLRRHAFKGHLLMHKSNKQKRKLSQVLCVKKSDV-KAIK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


Searching..................................................done


Results from round 2




>gi|154245877|ref|YP_001416835.1| ribosomal protein L35 [Xanthobacter autotrophicus Py2]
 gi|154159962|gb|ABS67178.1| ribosomal protein L35 [Xanthobacter autotrophicus Py2]
          Length = 403

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 50/66 (75%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+N  IRN RGT +LA  D + + +
Sbjct: 338 MPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRK 397

Query: 61  NYLPNG 66
           ++LPNG
Sbjct: 398 SFLPNG 403


>gi|157964749|ref|YP_001499573.1| 50S ribosomal protein L35 [Rickettsia massiliae MTU5]
 gi|157844525|gb|ABV85026.1| 50S ribosomal protein L35 [Rickettsia massiliae MTU5]
          Length = 92

 Score = 95.9 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 25 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 84

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 85 YFLPYGI 91


>gi|165933516|ref|YP_001650305.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. Iowa]
 gi|229586951|ref|YP_002845452.1| 50S ribosomal protein L35 [Rickettsia africae ESF-5]
 gi|165908603|gb|ABY72899.1| LSU ribosomal protein L35P [Rickettsia rickettsii str. Iowa]
 gi|228022001|gb|ACP53709.1| 50S ribosomal protein L35 [Rickettsia africae ESF-5]
          Length = 89

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 22 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 81

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 82 YFLPYGI 88


>gi|225626492|ref|ZP_03784531.1| ribosomal protein L35 [Brucella ceti str. Cudo]
 gi|225618149|gb|EEH15192.1| ribosomal protein L35 [Brucella ceti str. Cudo]
          Length = 129

 Score = 94.4 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K++ 
Sbjct: 64  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVE 122

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 123 QFLPNGL 129


>gi|15620044|gb|AAL03472.1| 50S ribosomal protein L35 [Rickettsia conorii str. Malish 7]
          Length = 89

 Score = 94.0 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 22 MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDRYNIKK 81

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 82 YFLPYGI 88


>gi|148560118|ref|YP_001259918.1| hypothetical protein BOV_2034 [Brucella ovis ATCC 25840]
 gi|148371375|gb|ABQ61354.1| conserved domain protein [Brucella ovis ATCC 25840]
          Length = 123

 Score = 94.0 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 58  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 116

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 117 QFLPNGL 123


>gi|239833160|ref|ZP_04681489.1| ribosomal protein L35 [Ochrobactrum intermedium LMG 3301]
 gi|239825427|gb|EEQ96995.1| ribosomal protein L35 [Ochrobactrum intermedium LMG 3301]
          Length = 115

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT S++KKRF IT TGK++A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++
Sbjct: 50  MPKMKTKSAAKKRFKITGTGKIKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVK 108

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 109 QFLPNGL 115


>gi|217977995|ref|YP_002362142.1| 50S ribosomal protein L35 [Methylocella silvestris BL2]
 gi|254802460|sp|B8ELZ9|RL35_METSB RecName: Full=50S ribosomal protein L35
 gi|217503371|gb|ACK50780.1| ribosomal protein L35 [Methylocella silvestris BL2]
          Length = 66

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 49/66 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+NK IRN RGT V+  +D   +I+
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVLYAQAGKRHGMIKRTNKQIRNLRGTSVMFKSDGDNIIK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|254780319|ref|YP_003064732.1| 50S ribosomal protein L35 [Candidatus Liberibacter asiaticus str.
          psy62]
 gi|254039996|gb|ACT56792.1| 50S ribosomal protein L35 [Candidatus Liberibacter asiaticus str.
          psy62]
          Length = 67

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 67/67 (100%), Positives = 67/67 (100%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR
Sbjct: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60

Query: 61 NYLPNGI 67
          NYLPNGI
Sbjct: 61 NYLPNGI 67


>gi|170743418|ref|YP_001772073.1| 50S ribosomal protein L35 [Methylobacterium sp. 4-46]
 gi|220925397|ref|YP_002500699.1| 50S ribosomal protein L35 [Methylobacterium nodulans ORS 2060]
 gi|226725034|sp|B0UPJ7|RL35_METS4 RecName: Full=50S ribosomal protein L35
 gi|254802459|sp|B8IP78|RL35_METNO RecName: Full=50S ribosomal protein L35
 gi|168197692|gb|ACA19639.1| ribosomal protein L35 [Methylobacterium sp. 4-46]
 gi|219950004|gb|ACL60396.1| ribosomal protein L35 [Methylobacterium nodulans ORS 2060]
          Length = 66

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+ K IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVLYAQAGKRHGMIKRTTKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 FFLPNG 66


>gi|13474220|ref|NP_105788.1| 50S ribosomal protein L35 [Mesorhizobium loti MAFF303099]
 gi|260463244|ref|ZP_05811446.1| ribosomal protein L35 [Mesorhizobium opportunistum WSM2075]
 gi|319780187|ref|YP_004139663.1| ribosomal protein L35 [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
 gi|20139629|sp|Q98CP7|RL35_RHILO RecName: Full=50S ribosomal protein L35
 gi|14024972|dbj|BAB51574.1| ribosomal protein L35 [Mesorhizobium loti MAFF303099]
 gi|259031094|gb|EEW32368.1| ribosomal protein L35 [Mesorhizobium opportunistum WSM2075]
 gi|317166075|gb|ADV09613.1| ribosomal protein L35 [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
          Length = 67

 Score = 88.6 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV + AAGKRHGMIKRSNKFIRNARGTMVLA  D KKVI+
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIK 60

Query: 61 NYLPNGI 67
          N+LPNG+
Sbjct: 61 NFLPNGL 67


>gi|222147171|ref|YP_002548128.1| 50S ribosomal protein L35 [Agrobacterium vitis S4]
 gi|254802424|sp|B9JYM8|RL35_AGRVS RecName: Full=50S ribosomal protein L35
 gi|221734161|gb|ACM35124.1| 50S ribosomal protein L35 [Agrobacterium vitis S4]
          Length = 67

 Score = 88.6 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/67 (85%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV A AAGKRHGMIKRSNKFIRNARGTMVLA AD KKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVLAAAAGKRHGMIKRSNKFIRNARGTMVLAEADGKKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|315122257|ref|YP_004062746.1| 50S ribosomal protein L35 [Candidatus Liberibacter solanacearum
          CLso-ZC1]
 gi|313495659|gb|ADR52258.1| 50S ribosomal protein L35 [Candidatus Liberibacter solanacearum
          CLso-ZC1]
          Length = 67

 Score = 88.6 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/67 (89%), Positives = 65/67 (97%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSSSKKRFSITA+GKV+AQAAGKRHGMIKRSNKFIRNARG MVL +ADAKK+IR
Sbjct: 1  MPKMKTNSSSKKRFSITASGKVKAQAAGKRHGMIKRSNKFIRNARGAMVLGAADAKKIIR 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|121602467|ref|YP_989563.1| 50S ribosomal protein L35 [Bartonella bacilliformis KC583]
 gi|166231157|sp|A1UUB0|RL35_BARBK RecName: Full=50S ribosomal protein L35
 gi|120614644|gb|ABM45245.1| ribosomal protein L35 [Bartonella bacilliformis KC583]
          Length = 67

 Score = 88.6 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGK++  AAGKRHGMIKRSNKFIR+ARGTM+LA  DAKKVI 
Sbjct: 1  MPKMKTKSSAKKRFKITATGKIKVAAAGKRHGMIKRSNKFIRDARGTMILAEPDAKKVIH 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|163867393|ref|YP_001608587.1| 50S ribosomal protein L35 [Bartonella tribocorum CIP 105476]
 gi|189042756|sp|A9ILR1|RL35_BART1 RecName: Full=50S ribosomal protein L35
 gi|161017034|emb|CAK00592.1| 50S ribosomal protein L35 [Bartonella tribocorum CIP 105476]
          Length = 67

 Score = 88.2 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TA+GK++  AAGKRHGMIKRSNKFIR+ARGTMVL   DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTASGKIKVAAAGKRHGMIKRSNKFIRDARGTMVLCEQDAKKVIQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGL 67


>gi|319403567|emb|CBI77149.1| 50S ribosomal protein L35 [Bartonella rochalimae ATCC BAA-1498]
 gi|319406479|emb|CBI80120.1| 50S ribosomal protein L35 [Bartonella sp. 1-1C]
          Length = 67

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV+A AAGKRHGMIKRSNKFIR+ARG MVLA  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVKAAAAGKRHGMIKRSNKFIRDARGMMVLAEPDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|182679947|ref|YP_001834093.1| 50S ribosomal protein L35 [Beijerinckia indica subsp. indica ATCC
          9039]
 gi|226713822|sp|B2IBH8|RL35_BEII9 RecName: Full=50S ribosomal protein L35
 gi|182635830|gb|ACB96604.1| ribosomal protein L35 [Beijerinckia indica subsp. indica ATCC
          9039]
          Length = 66

 Score = 87.8 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATGKV    +GKRHGMIKR+NK IRN RGT V+  +D  K+IR
Sbjct: 1  MPKLKTKSGAKKRFKITATGKVIYAQSGKRHGMIKRTNKQIRNLRGTNVMFKSDGDKIIR 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 FFLPNG 66


>gi|49473758|ref|YP_031800.1| 50S ribosomal protein L35 [Bartonella quintana str. Toulouse]
 gi|54036257|sp|Q6G1G3|RL35_BARQU RecName: Full=50S ribosomal protein L35
 gi|49239261|emb|CAF25582.1| 50s ribosomal protein l35 [Bartonella quintana str. Toulouse]
          Length = 67

 Score = 87.8 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/66 (80%), Positives = 59/66 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+  AAGKRHGMIKRSNKFIR+ARGTMVL+  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKVAAAGKRHGMIKRSNKFIRDARGTMVLSDQDAKKVIQ 60

Query: 61 NYLPNG 66
           YLPNG
Sbjct: 61 YYLPNG 66


>gi|23007891|ref|ZP_00049567.1| COG0291: Ribosomal protein L35 [Magnetospirillum magnetotacticum
          MS-1]
 gi|188580863|ref|YP_001924308.1| 50S ribosomal protein L35 [Methylobacterium populi BJ001]
 gi|226725032|sp|B1ZGB5|RL35_METPB RecName: Full=50S ribosomal protein L35
 gi|179344361|gb|ACB79773.1| ribosomal protein L35 [Methylobacterium populi BJ001]
          Length = 67

 Score = 87.8 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV    AGKRHGMIKR+NK IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVYAQAGKRHGMIKRTNKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|241207214|ref|YP_002978310.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM1325]
 gi|240861104|gb|ACS58771.1| ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 67

 Score = 87.4 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|116250035|ref|YP_765873.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. viciae
          3841]
 gi|222084529|ref|YP_002543058.1| ribosomal protein L35 [Agrobacterium radiobacter K84]
 gi|148887101|sp|Q1MMP5|RL35_RHIL3 RecName: Full=50S ribosomal protein L35
 gi|254802401|sp|B9J7G1|RL35_AGRRK RecName: Full=50S ribosomal protein L35
 gi|115254683|emb|CAK05757.1| putative 50S ribosomal protein L35 [Rhizobium leguminosarum bv.
          viciae 3841]
 gi|221721977|gb|ACM25133.1| ribosomal protein L35 [Agrobacterium radiobacter K84]
          Length = 67

 Score = 87.4 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 55/67 (82%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|15887605|ref|NP_353286.1| 50S ribosomal protein L35 [Agrobacterium tumefaciens str. C58]
 gi|325291691|ref|YP_004277555.1| 50S ribosomal protein L35 [Agrobacterium sp. H13-3]
 gi|22096093|sp|Q8UIN8|RL35_AGRT5 RecName: Full=50S ribosomal protein L35
 gi|15155148|gb|AAK86071.1| 50S ribosomal protein L35 [Agrobacterium tumefaciens str. C58]
 gi|325059544|gb|ADY63235.1| 50S ribosomal protein L35 [Agrobacterium sp. H13-3]
          Length = 67

 Score = 87.4 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF ITATGKV A AAGKRHGMIKR+NKFIR+ARGTMVLA AD KKV++
Sbjct: 1  MPKMKTKSAAKKRFKITATGKVVAAAAGKRHGMIKRTNKFIRDARGTMVLAEADGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|323138786|ref|ZP_08073850.1| ribosomal protein L35 [Methylocystis sp. ATCC 49242]
 gi|322395934|gb|EFX98471.1| ribosomal protein L35 [Methylocystis sp. ATCC 49242]
          Length = 66

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV     GKRHGMIKR+NK IRN RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVVYAQQGKRHGMIKRTNKQIRNLRGTNVLFKTDGDNIKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|163851054|ref|YP_001639097.1| 50S ribosomal protein L35 [Methylobacterium extorquens PA1]
 gi|218529884|ref|YP_002420700.1| 50S ribosomal protein L35 [Methylobacterium chloromethanicum CM4]
 gi|240138188|ref|YP_002962660.1| 50S ribosomal protein L35 [Methylobacterium extorquens AM1]
 gi|254560748|ref|YP_003067843.1| 50S ribosomal protein L35 [Methylobacterium extorquens DM4]
 gi|226725031|sp|A9W370|RL35_METEP RecName: Full=50S ribosomal protein L35
 gi|254802458|sp|B7KVA1|RL35_METC4 RecName: Full=50S ribosomal protein L35
 gi|163662659|gb|ABY30026.1| ribosomal protein L35 [Methylobacterium extorquens PA1]
 gi|218522187|gb|ACK82772.1| ribosomal protein L35 [Methylobacterium chloromethanicum CM4]
 gi|240008157|gb|ACS39383.1| 50S ribosomal protein L35 [Methylobacterium extorquens AM1]
 gi|254268026|emb|CAX23897.1| 50S ribosomal protein L35 [Methylobacterium extorquens DM4]
          Length = 67

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+NK IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVMYAQAGKRHGMIKRTNKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|158426071|ref|YP_001527363.1| ribosomal protein L35 [Azorhizobium caulinodans ORS 571]
 gi|172047849|sp|A8HWM0|RL35_AZOC5 RecName: Full=50S ribosomal protein L35
 gi|158332960|dbj|BAF90445.1| ribosomal protein L35 [Azorhizobium caulinodans ORS 571]
          Length = 66

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+NK IRN RGT +L  +D + + +
Sbjct: 1  MPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNKTIRNQRGTNILCESDGRIIRK 60

Query: 61 NYLPNG 66
          ++LPNG
Sbjct: 61 SFLPNG 66


>gi|319898274|ref|YP_004158367.1| 50S ribosomal protein L35 [Bartonella clarridgeiae 73]
 gi|319402238|emb|CBI75771.1| 50S ribosomal protein L35 [Bartonella clarridgeiae 73]
          Length = 67

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV+A AAGKRHGMIKRSNKFIR+ARG MVLA  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVKAAAAGKRHGMIKRSNKFIRDARGMMVLAEQDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|15964036|ref|NP_384389.1| 50S ribosomal protein L35 [Sinorhizobium meliloti 1021]
 gi|150398670|ref|YP_001329137.1| 50S ribosomal protein L35 [Sinorhizobium medicae WSM419]
 gi|307301182|ref|ZP_07580944.1| ribosomal protein L35 [Sinorhizobium meliloti BL225C]
 gi|307321083|ref|ZP_07600488.1| ribosomal protein L35 [Sinorhizobium meliloti AK83]
 gi|20139569|sp|Q92ST2|RL35_RHIME RecName: Full=50S ribosomal protein L35
 gi|166199838|sp|A6UF72|RL35_SINMW RecName: Full=50S ribosomal protein L35
 gi|15073212|emb|CAC41720.1| Probable 50S ribosomal protein L35 [Sinorhizobium meliloti 1021]
 gi|150030185|gb|ABR62302.1| ribosomal protein L35 [Sinorhizobium medicae WSM419]
 gi|306893255|gb|EFN24036.1| ribosomal protein L35 [Sinorhizobium meliloti AK83]
 gi|306903638|gb|EFN34225.1| ribosomal protein L35 [Sinorhizobium meliloti BL225C]
          Length = 67

 Score = 87.4 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKVRA AAGKRHGMIKRSNKFIR+ARGTMVLA  D KKV++
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVRAAAAGKRHGMIKRSNKFIRDARGTMVLAEPDGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|319404993|emb|CBI78602.1| 50S ribosomal protein L35 [Bartonella sp. AR 15-3]
          Length = 67

 Score = 87.0 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGK++A AAGKRHGMIKRSNKFIR+ARG MVLA +DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKIKAAAAGKRHGMIKRSNKFIRDARGMMVLAESDAKKVIQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 CYLPNGL 67


>gi|240849767|ref|YP_002971155.1| 50S ribosomal protein L35 [Bartonella grahamii as4aup]
 gi|240266890|gb|ACS50478.1| 50S ribosomal protein L35 [Bartonella grahamii as4aup]
          Length = 67

 Score = 87.0 bits (215), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GK++  AAGKRHGMIKRSNKFIR+ARGTMVL   DAKKV++
Sbjct: 1  MPKMKTKSSAKKRFKITASGKIKVAAAGKRHGMIKRSNKFIRDARGTMVLCEQDAKKVVQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGV 67


>gi|190889927|ref|YP_001976469.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 652]
 gi|209551836|ref|YP_002283753.1| 50S ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|218459865|ref|ZP_03499956.1| 50S ribosomal protein L35 [Rhizobium etli Kim 5]
 gi|218680047|ref|ZP_03527944.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 894]
 gi|226725054|sp|B3PYE0|RL35_RHIE6 RecName: Full=50S ribosomal protein L35
 gi|226725055|sp|B5ZXR8|RL35_RHILW RecName: Full=50S ribosomal protein L35
 gi|190695206|gb|ACE89291.1| 50S ribosomal protein L35 [Rhizobium etli CIAT 652]
 gi|209537592|gb|ACI57527.1| ribosomal protein L35 [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 67

 Score = 87.0 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV+A AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KVI+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVIK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|49474904|ref|YP_032945.1| 50S ribosomal protein L35 [Bartonella henselae str. Houston-1]
 gi|54036258|sp|Q6G5E5|RL35_BARHE RecName: Full=50S ribosomal protein L35
 gi|49237709|emb|CAF26898.1| 50S ribosomal protein l35 [Bartonella henselae str. Houston-1]
          Length = 67

 Score = 86.7 bits (214), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 53/67 (79%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA+GKV+  AAGKRHGMIKRSNKFIR+ARGTMVL+  DAKKVI+
Sbjct: 1  MPKMKTKSSAKKRFKITASGKVKVAAAGKRHGMIKRSNKFIRDARGTMVLSEQDAKKVIQ 60

Query: 61 NYLPNGI 67
          +YLPNG+
Sbjct: 61 HYLPNGL 67


>gi|227824126|ref|YP_002828099.1| 50S ribosomal protein L35 [Sinorhizobium fredii NGR234]
 gi|254802466|sp|C3MCP8|RL35_RHISN RecName: Full=50S ribosomal protein L35
 gi|227343128|gb|ACP27346.1| 50S ribosomal protein L35 [Sinorhizobium fredii NGR234]
          Length = 67

 Score = 86.7 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/67 (80%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKVRA AAGKRHGMIKR+NKFIR+ARGTMVLA  D KKV++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVRAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGKKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|170749557|ref|YP_001755817.1| 50S ribosomal protein L35 [Methylobacterium radiotolerans JCM
          2831]
 gi|226725033|sp|B1M6P3|RL35_METRJ RecName: Full=50S ribosomal protein L35
 gi|170656079|gb|ACB25134.1| ribosomal protein L35 [Methylobacterium radiotolerans JCM 2831]
          Length = 67

 Score = 86.7 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV    AGKRHGMIKR+ K IRN RGT  L   DA  V +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVMYAQAGKRHGMIKRTTKQIRNLRGTTTLFEGDAANVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|51473786|ref|YP_067543.1| 50S ribosomal protein L35 [Rickettsia typhi str. Wilmington]
 gi|81692288|sp|Q68WD1|RL35_RICTY RecName: Full=50S ribosomal protein L35
 gi|51460098|gb|AAU04061.1| 50S ribosomal protein L35 [Rickettsia typhi str. Wilmington]
          Length = 68

 Score = 86.7 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF  TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKFTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|239948219|ref|ZP_04699972.1| ribosomal protein L35 [Rickettsia endosymbiont of Ixodes
          scapularis]
 gi|239922495|gb|EER22519.1| ribosomal protein L35 [Rickettsia endosymbiont of Ixodes
          scapularis]
          Length = 68

 Score = 86.7 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKTQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|34581433|ref|ZP_00142913.1| 50S ribosomal protein L35 [Rickettsia sibirica 246]
 gi|67458742|ref|YP_246366.1| 50S ribosomal protein L35 [Rickettsia felis URRWXCal2]
 gi|157828788|ref|YP_001495030.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. 'Sheila
          Smith']
 gi|238650658|ref|YP_002916510.1| 50S ribosomal protein L35 [Rickettsia peacockii str. Rustic]
 gi|75536801|sp|Q4UMK7|RL35_RICFE RecName: Full=50S ribosomal protein L35
 gi|166199830|sp|A8GSZ7|RL35_RICRS RecName: Full=50S ribosomal protein L35
 gi|259647362|sp|C4K1L1|RL35_RICPU RecName: Full=50S ribosomal protein L35
 gi|28262818|gb|EAA26322.1| 50S ribosomal protein L35 [Rickettsia sibirica 246]
 gi|67004275|gb|AAY61201.1| 50S ribosomal protein L35 [Rickettsia felis URRWXCal2]
 gi|157801269|gb|ABV76522.1| 50S ribosomal protein L35 [Rickettsia rickettsii str. 'Sheila
          Smith']
 gi|238624756|gb|ACR47462.1| 50S ribosomal protein L35 [Rickettsia peacockii str. Rustic]
          Length = 68

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|312113590|ref|YP_004011186.1| ribosomal protein L35 [Rhodomicrobium vannielii ATCC 17100]
 gi|311218719|gb|ADP70087.1| ribosomal protein L35 [Rhodomicrobium vannielii ATCC 17100]
          Length = 67

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF IT TGKV A  AGKRHGMIKR+ KFIRN+RG++VL   DA  V +
Sbjct: 1  MPKMKTKSGVKKRFKITGTGKVLAGQAGKRHGMIKRTPKFIRNSRGSVVLEPGDANHVKK 60

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 61 -WAPYGL 66


>gi|86355919|ref|YP_467811.1| 50S ribosomal protein L35 [Rhizobium etli CFN 42]
 gi|148887100|sp|Q2KDK2|RL35_RHIEC RecName: Full=50S ribosomal protein L35
 gi|86280021|gb|ABC89084.1| 50S ribosomal protein L35 [Rhizobium etli CFN 42]
          Length = 67

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 61/67 (91%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF ITA+GKV+A AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KV++
Sbjct: 1  MPKMKTKSAAKKRFKITASGKVKAAAAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVVK 60

Query: 61 NYLPNGI 67
          NYLPNG+
Sbjct: 61 NYLPNGL 67


>gi|297247345|ref|ZP_06931063.1| 50S ribosomal protein L35 [Brucella abortus bv. 5 str. B3196]
 gi|297174514|gb|EFH33861.1| 50S ribosomal protein L35 [Brucella abortus bv. 5 str. B3196]
          Length = 96

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 31 MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 89

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 90 QFLPNGL 96


>gi|256158620|ref|ZP_05456507.1| hypothetical protein BcetM4_07126 [Brucella ceti M490/95/1]
 gi|256254028|ref|ZP_05459564.1| hypothetical protein BcetB_06968 [Brucella ceti B1/94]
 gi|260169526|ref|ZP_05756337.1| hypothetical protein BruF5_14444 [Brucella sp. F5/99]
 gi|261221167|ref|ZP_05935448.1| ribosomal protein L35 [Brucella ceti B1/94]
 gi|261759053|ref|ZP_06002762.1| ribosomal protein L35 [Brucella sp. F5/99]
 gi|265997127|ref|ZP_06109684.1| ribosomal protein L35 [Brucella ceti M490/95/1]
 gi|260919751|gb|EEX86404.1| ribosomal protein L35 [Brucella ceti B1/94]
 gi|261739037|gb|EEY27033.1| ribosomal protein L35 [Brucella sp. F5/99]
 gi|262551595|gb|EEZ07585.1| ribosomal protein L35 [Brucella ceti M490/95/1]
          Length = 66

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK ++ 
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVE 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|326386437|ref|ZP_08208060.1| 50S ribosomal protein L35 [Novosphingobium nitrogenifigens DSM
          19370]
 gi|326209098|gb|EGD59892.1| 50S ribosomal protein L35 [Novosphingobium nitrogenifigens DSM
          19370]
          Length = 67

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITATGKV+   AGKRH +I  + K+IR  RGT V++ ADA +VI+
Sbjct: 1  MPKLKTKSGVKKRFKITATGKVKHGVAGKRHRLISHNAKYIRQNRGTDVISDADA-RVIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|194098022|ref|YP_002001070.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          NCCP11945]
 gi|297250594|ref|ZP_06864618.2| conserved domain protein [Neisseria polysaccharea ATCC 43768]
 gi|193933312|gb|ACF29136.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          NCCP11945]
 gi|296838506|gb|EFH22444.1| conserved domain protein [Neisseria polysaccharea ATCC 43768]
 gi|325141984|gb|EGC64421.1| ribosomal protein L35 [Neisseria meningitidis 961-5945]
          Length = 92

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 28 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 87

Query: 61 NYLPN 65
            LP 
Sbjct: 88 -MLPY 91


>gi|15604458|ref|NP_220976.1| 50S ribosomal protein L35 [Rickettsia prowazekii str. Madrid E]
 gi|6226001|sp|Q9ZCV1|RL35_RICPR RecName: Full=50S ribosomal protein L35
 gi|3861152|emb|CAA15052.1| 50S RIBOSOMAL PROTEIN L35 (rpmI) [Rickettsia prowazekii]
 gi|292572232|gb|ADE30147.1| 50S ribosomal protein L35 [Rickettsia prowazekii Rp22]
          Length = 67

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF  TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKFTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGHNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|319407948|emb|CBI81602.1| 50S ribosomal protein L35 [Bartonella schoenbuchensis R1]
          Length = 67

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITA G+V+A AAGKRHGMIKRSNKFIR+ARGTM+LA +DAKK+ +
Sbjct: 1  MPKMKTKSSAKKRFKITALGRVKAAAAGKRHGMIKRSNKFIRDARGTMILAESDAKKITQ 60

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 61 YYLPNGL 67


>gi|91205679|ref|YP_538034.1| 50S ribosomal protein L35 [Rickettsia bellii RML369-C]
 gi|157826863|ref|YP_001495927.1| 50S ribosomal protein L35 [Rickettsia bellii OSU 85-389]
 gi|148887106|sp|Q1RI69|RL35_RICBR RecName: Full=50S ribosomal protein L35
 gi|166199828|sp|A8GVL3|RL35_RICB8 RecName: Full=50S ribosomal protein L35
 gi|91069223|gb|ABE04945.1| 50S ribosomal protein L35 [Rickettsia bellii RML369-C]
 gi|157802167|gb|ABV78890.1| 50S ribosomal protein L35 [Rickettsia bellii OSU 85-389]
          Length = 68

 Score = 84.7 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/66 (50%), Positives = 44/66 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVVASQAGKKHFMRRRTKAQIRNLRGTTILCDQDGYNIKK 60

Query: 61 NYLPNG 66
           +LP G
Sbjct: 61 YFLPYG 66


>gi|255066459|ref|ZP_05318314.1| conserved domain protein [Neisseria sicca ATCC 29256]
 gi|288576252|ref|ZP_05978466.2| conserved domain protein [Neisseria mucosa ATCC 25996]
 gi|255049339|gb|EET44803.1| conserved domain protein [Neisseria sicca ATCC 29256]
 gi|288565907|gb|EFC87467.1| conserved domain protein [Neisseria mucosa ATCC 25996]
          Length = 97

 Score = 84.7 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 92

Query: 61 NYLPN 65
            LP 
Sbjct: 93 -MLPY 96


>gi|254474302|ref|ZP_05087692.1| ribosomal protein L35 [Pseudovibrio sp. JE062]
 gi|211956676|gb|EEA91886.1| ribosomal protein L35 [Pseudovibrio sp. JE062]
          Length = 65

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+   AGKRHGMIKR+NKFIRNARGT  L  ADA ++++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKCAQAGKRHGMIKRTNKFIRNARGTTTLCDADA-RIVK 59

Query: 61 NYLPNG 66
           YLP G
Sbjct: 60 KYLPYG 65


>gi|296446655|ref|ZP_06888596.1| ribosomal protein L35 [Methylosinus trichosporium OB3b]
 gi|296255883|gb|EFH02969.1| ribosomal protein L35 [Methylosinus trichosporium OB3b]
          Length = 66

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 46/66 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF IT TGKV     GKRHGMIKR+NK IRN RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITGTGKVVYAQKGKRHGMIKRTNKQIRNLRGTSVLFKTDGDNIKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|153008137|ref|YP_001369352.1| 50S ribosomal protein L35 [Ochrobactrum anthropi ATCC 49188]
 gi|166231208|sp|A6WX19|RL35_OCHA4 RecName: Full=50S ribosomal protein L35
 gi|151560025|gb|ABS13523.1| ribosomal protein L35 [Ochrobactrum anthropi ATCC 49188]
          Length = 66

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGK++A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKIKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|304387976|ref|ZP_07370148.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
 gi|304337975|gb|EFM04113.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
 gi|325127772|gb|EGC50680.1| ribosomal protein L35 [Neisseria meningitidis N1568]
 gi|325203809|gb|ADY99262.1| ribosomal protein L35 [Neisseria meningitidis M01-240355]
          Length = 97

 Score = 84.3 bits (208), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 92

Query: 61 NYLPN 65
            LP 
Sbjct: 93 -MLPY 96


>gi|17988291|ref|NP_540925.1| 50S ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|23502967|ref|NP_699094.1| 50S ribosomal protein L35 [Brucella suis 1330]
 gi|62290959|ref|YP_222752.1| 50S ribosomal protein L35 [Brucella abortus bv. 1 str. 9-941]
 gi|82700870|ref|YP_415444.1| 50S ribosomal protein L35 [Brucella melitensis biovar Abortus
          2308]
 gi|163844135|ref|YP_001628539.1| 50S ribosomal protein L35 [Brucella suis ATCC 23445]
 gi|189025173|ref|YP_001935941.1| 50S ribosomal protein L35 [Brucella abortus S19]
 gi|225853546|ref|YP_002733779.1| 50S ribosomal protein L35 [Brucella melitensis ATCC 23457]
 gi|254690254|ref|ZP_05153508.1| hypothetical protein Babob68_08797 [Brucella abortus bv. 6 str.
          870]
 gi|254694741|ref|ZP_05156569.1| hypothetical protein Babob3T_08788 [Brucella abortus bv. 3 str.
          Tulya]
 gi|254696370|ref|ZP_05158198.1| hypothetical protein Babob28_01298 [Brucella abortus bv. 2 str.
          86/8/59]
 gi|254700751|ref|ZP_05162579.1| hypothetical protein Bsuib55_07822 [Brucella suis bv. 5 str. 513]
 gi|254705123|ref|ZP_05166951.1| hypothetical protein Bsuib36_14606 [Brucella suis bv. 3 str. 686]
 gi|254707361|ref|ZP_05169189.1| hypothetical protein BpinM_10410 [Brucella pinnipedialis
          M163/99/10]
 gi|254709096|ref|ZP_05170907.1| hypothetical protein BpinB_02282 [Brucella pinnipedialis B2/94]
 gi|254713478|ref|ZP_05175289.1| hypothetical protein BcetM6_09009 [Brucella ceti M644/93/1]
 gi|254716166|ref|ZP_05177977.1| hypothetical protein BcetM_06991 [Brucella ceti M13/05/1]
 gi|254718162|ref|ZP_05179973.1| hypothetical protein Bru83_01201 [Brucella sp. 83/13]
 gi|254731284|ref|ZP_05189862.1| hypothetical protein Babob42_08820 [Brucella abortus bv. 4 str.
          292]
 gi|256030621|ref|ZP_05444235.1| hypothetical protein BpinM2_08207 [Brucella pinnipedialis
          M292/94/1]
 gi|256045724|ref|ZP_05448602.1| hypothetical protein Bmelb1R_14560 [Brucella melitensis bv. 1
          str. Rev.1]
 gi|256112445|ref|ZP_05453366.1| hypothetical protein Bmelb3E_07163 [Brucella melitensis bv. 3
          str. Ether]
 gi|256258507|ref|ZP_05464043.1| hypothetical protein Babob9C_14402 [Brucella abortus bv. 9 str.
          C68]
 gi|256262969|ref|ZP_05465501.1| ribosomal protein L35 [Brucella melitensis bv. 2 str. 63/9]
 gi|256370517|ref|YP_003108028.1| 50S ribosomal protein L35 [Brucella microti CCM 4915]
 gi|260546223|ref|ZP_05821963.1| 50S ribosomal protein L35 [Brucella abortus NCTC 8038]
 gi|260563023|ref|ZP_05833509.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|260755793|ref|ZP_05868141.1| ribosomal protein L35 [Brucella abortus bv. 6 str. 870]
 gi|260759016|ref|ZP_05871364.1| ribosomal protein L35 [Brucella abortus bv. 4 str. 292]
 gi|260760741|ref|ZP_05873084.1| ribosomal protein L35 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884817|ref|ZP_05896431.1| 50S ribosomal protein L35 [Brucella abortus bv. 9 str. C68]
 gi|261215068|ref|ZP_05929349.1| ribosomal protein L35 [Brucella abortus bv. 3 str. Tulya]
 gi|261217938|ref|ZP_05932219.1| ribosomal protein L35 [Brucella ceti M13/05/1]
 gi|261314846|ref|ZP_05954043.1| ribosomal protein L35 [Brucella pinnipedialis M163/99/10]
 gi|261316595|ref|ZP_05955792.1| 50S ribosomal protein L35 [Brucella pinnipedialis B2/94]
 gi|261321212|ref|ZP_05960409.1| ribosomal protein L35 [Brucella ceti M644/93/1]
 gi|261751260|ref|ZP_05994969.1| ribosomal protein L35 [Brucella suis bv. 5 str. 513]
 gi|261755825|ref|ZP_05999534.1| 50S ribosomal protein L35 [Brucella suis bv. 3 str. 686]
 gi|265983116|ref|ZP_06095851.1| ribosomal protein L35 [Brucella sp. 83/13]
 gi|265987667|ref|ZP_06100224.1| ribosomal protein L35 [Brucella pinnipedialis M292/94/1]
 gi|265992142|ref|ZP_06104699.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993880|ref|ZP_06106437.1| 50S ribosomal protein L35 [Brucella melitensis bv. 3 str. Ether]
 gi|294851345|ref|ZP_06792018.1| 50S ribosomal protein L35 [Brucella sp. NVSL 07-0026]
 gi|306837676|ref|ZP_07470545.1| ribosomal protein L35 [Brucella sp. NF 2653]
 gi|306842768|ref|ZP_07475410.1| ribosomal protein L35 [Brucella sp. BO2]
 gi|306843538|ref|ZP_07476139.1| ribosomal protein L35 [Brucella sp. BO1]
 gi|54039201|sp|P66266|RL35_BRUSU RecName: Full=50S ribosomal protein L35
 gi|54041898|sp|P66265|RL35_BRUME RecName: Full=50S ribosomal protein L35
 gi|75505182|sp|Q57AE3|RL35_BRUAB RecName: Full=50S ribosomal protein L35
 gi|148887065|sp|Q2YQV8|RL35_BRUA2 RecName: Full=50S ribosomal protein L35
 gi|189042758|sp|B0CJL7|RL35_BRUSI RecName: Full=50S ribosomal protein L35
 gi|226713829|sp|B2S9B5|RL35_BRUA1 RecName: Full=50S ribosomal protein L35
 gi|254802437|sp|C0RG03|RL35_BRUMB RecName: Full=50S ribosomal protein L35
 gi|17984062|gb|AAL53189.1| lsu ribosomal protein l35p [Brucella melitensis bv. 1 str. 16M]
 gi|23349004|gb|AAN31009.1| ribosomal protein L35 [Brucella suis 1330]
 gi|62197091|gb|AAX75391.1| RpmI, ribosomal protein L35 [Brucella abortus bv. 1 str. 9-941]
 gi|82616971|emb|CAJ12079.1| Ribosomal protein L35 [Brucella melitensis biovar Abortus 2308]
 gi|163674858|gb|ABY38969.1| ribosomal protein L35 [Brucella suis ATCC 23445]
 gi|189020745|gb|ACD73467.1| Ribosomal protein L35 [Brucella abortus S19]
 gi|225641911|gb|ACO01825.1| ribosomal protein L35 [Brucella melitensis ATCC 23457]
 gi|256000680|gb|ACU49079.1| 50S ribosomal protein L35 [Brucella microti CCM 4915]
 gi|260096330|gb|EEW80206.1| 50S ribosomal protein L35 [Brucella abortus NCTC 8038]
 gi|260153039|gb|EEW88131.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. 16M]
 gi|260669334|gb|EEX56274.1| ribosomal protein L35 [Brucella abortus bv. 4 str. 292]
 gi|260671173|gb|EEX57994.1| ribosomal protein L35 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675901|gb|EEX62722.1| ribosomal protein L35 [Brucella abortus bv. 6 str. 870]
 gi|260874345|gb|EEX81414.1| 50S ribosomal protein L35 [Brucella abortus bv. 9 str. C68]
 gi|260916675|gb|EEX83536.1| ribosomal protein L35 [Brucella abortus bv. 3 str. Tulya]
 gi|260923027|gb|EEX89595.1| ribosomal protein L35 [Brucella ceti M13/05/1]
 gi|261293902|gb|EEX97398.1| ribosomal protein L35 [Brucella ceti M644/93/1]
 gi|261295818|gb|EEX99314.1| 50S ribosomal protein L35 [Brucella pinnipedialis B2/94]
 gi|261303872|gb|EEY07369.1| ribosomal protein L35 [Brucella pinnipedialis M163/99/10]
 gi|261741013|gb|EEY28939.1| ribosomal protein L35 [Brucella suis bv. 5 str. 513]
 gi|261745578|gb|EEY33504.1| 50S ribosomal protein L35 [Brucella suis bv. 3 str. 686]
 gi|262764861|gb|EEZ10782.1| 50S ribosomal protein L35 [Brucella melitensis bv. 3 str. Ether]
 gi|263003208|gb|EEZ15501.1| ribosomal protein L35 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092843|gb|EEZ17018.1| ribosomal protein L35 [Brucella melitensis bv. 2 str. 63/9]
 gi|264659864|gb|EEZ30125.1| ribosomal protein L35 [Brucella pinnipedialis M292/94/1]
 gi|264661708|gb|EEZ31969.1| ribosomal protein L35 [Brucella sp. 83/13]
 gi|294819934|gb|EFG36933.1| 50S ribosomal protein L35 [Brucella sp. NVSL 07-0026]
 gi|306276229|gb|EFM57929.1| ribosomal protein L35 [Brucella sp. BO1]
 gi|306287112|gb|EFM58617.1| ribosomal protein L35 [Brucella sp. BO2]
 gi|306407234|gb|EFM63444.1| ribosomal protein L35 [Brucella sp. NF 2653]
 gi|326410118|gb|ADZ67183.1| Ribosomal protein L35 [Brucella melitensis M28]
          Length = 66

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 1  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|161723844|ref|NP_360571.2| 50S ribosomal protein L35 [Rickettsia conorii str. Malish 7]
 gi|20139546|sp|Q92H38|RL35_RICCN RecName: Full=50S ribosomal protein L35
          Length = 68

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TA+GKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDRYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|161869664|ref|YP_001598831.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
 gi|291044369|ref|ZP_06570078.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|293399555|ref|ZP_06643708.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
 gi|161595217|gb|ABX72877.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
 gi|291011263|gb|EFE03259.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|291610124|gb|EFF39246.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
 gi|316983703|gb|EFV62684.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
 gi|317163764|gb|ADV07305.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
          TCDC-NG08107]
 gi|325129873|gb|EGC52677.1| ribosomal protein L35 [Neisseria meningitidis OX99.30304]
 gi|325131825|gb|EGC54525.1| ribosomal protein L35 [Neisseria meningitidis M6190]
 gi|325133764|gb|EGC56420.1| ribosomal protein L35 [Neisseria meningitidis M13399]
 gi|325136055|gb|EGC58665.1| ribosomal protein L35 [Neisseria meningitidis M0579]
 gi|325137875|gb|EGC60450.1| ribosomal protein L35 [Neisseria meningitidis ES14902]
 gi|325140123|gb|EGC62652.1| ribosomal protein L35 [Neisseria meningitidis CU385]
 gi|325144075|gb|EGC66383.1| ribosomal protein L35 [Neisseria meningitidis M01-240013]
 gi|325197941|gb|ADY93397.1| ribosomal protein L35 [Neisseria meningitidis G2136]
 gi|325200594|gb|ADY96049.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
 gi|325202482|gb|ADY97936.1| ribosomal protein L35 [Neisseria meningitidis M01-240149]
          Length = 97

 Score = 84.0 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 33 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 92

Query: 61 NYLPN 65
            LP 
Sbjct: 93 -MLPY 96


>gi|296532251|ref|ZP_06894995.1| 50S ribosomal protein L35 [Roseomonas cervicalis ATCC 49957]
 gi|296267421|gb|EFH13302.1| 50S ribosomal protein L35 [Roseomonas cervicalis ATCC 49957]
          Length = 90

 Score = 84.0 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF++TATGKV+A A  KRH +  ++NK  R  RGT VL   D   V +
Sbjct: 23 MPKMKTKSSVKKRFTLTATGKVKAGAGNKRHMLTAKTNKMKRQNRGTFVLDKQDGDTV-K 81

Query: 61 NYLPNG 66
           ++P G
Sbjct: 82 QWMPYG 87


>gi|87198709|ref|YP_495966.1| 50S ribosomal protein L35 [Novosphingobium aromaticivorans DSM
          12444]
 gi|148887088|sp|Q2GAJ1|RL35_NOVAD RecName: Full=50S ribosomal protein L35
 gi|87134390|gb|ABD25132.1| LSU ribosomal protein L35P [Novosphingobium aromaticivorans DSM
          12444]
          Length = 67

 Score = 84.0 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TA+GKV+   AGKRH +I  + K+IR  RGT V++ ADA KVI+
Sbjct: 1  MPKLKTKSGVKKRFKLTASGKVKHGVAGKRHRLISHNAKYIRQNRGTEVISDADA-KVIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 KWAPYGL 66


>gi|289608111|emb|CBI60653.1| unnamed protein product [Sordaria macrospora]
          Length = 67

 Score = 83.6 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TATGKV+   AGKRH +I  + K+IR  RGT VLA AD   + +
Sbjct: 1  MPKLKTKSGVKKRFKFTATGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLADADVAHI-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|157826001|ref|YP_001493721.1| 50S ribosomal protein L35 [Rickettsia akari str. Hartford]
 gi|166199827|sp|A8GP88|RL35_RICAH RecName: Full=50S ribosomal protein L35
 gi|157799959|gb|ABV75213.1| 50S ribosomal protein L35 [Rickettsia akari str. Hartford]
          Length = 68

 Score = 83.6 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 45/67 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRF +TATGKV A  AGK+H M +R+   IRN RGT +L   D   + +
Sbjct: 1  MPKLKTKSAVKKRFKLTATGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPKDGYNIKK 60

Query: 61 NYLPNGI 67
           +LP GI
Sbjct: 61 YFLPYGI 67


>gi|148555347|ref|YP_001262929.1| 50S ribosomal protein L35 [Sphingomonas wittichii RW1]
 gi|166233038|sp|A5V925|RL35_SPHWW RecName: Full=50S ribosomal protein L35
 gi|148500537|gb|ABQ68791.1| LSU ribosomal protein L35P [Sphingomonas wittichii RW1]
          Length = 67

 Score = 83.6 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGKV+   AGKRH +I  ++K+IR  RGT VLA AD  +V +
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKVKHGVAGKRHRLISHNSKYIRTNRGTTVLAEADTARV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|307293505|ref|ZP_07573349.1| ribosomal protein L35 [Sphingobium chlorophenolicum L-1]
 gi|306879656|gb|EFN10873.1| ribosomal protein L35 [Sphingobium chlorophenolicum L-1]
          Length = 67

 Score = 83.6 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  + K+IR  RGT VL+ AD   V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLSDADVAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|94497864|ref|ZP_01304430.1| ribosomal protein L35 [Sphingomonas sp. SKA58]
 gi|94422753|gb|EAT07788.1| ribosomal protein L35 [Sphingomonas sp. SKA58]
          Length = 67

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF  TATGKV+   AGKRH +I  + K+IR  RGT VL+ +DA  V R
Sbjct: 1  MPKMKTKSGVKKRFKFTATGKVKHGVAGKRHRLISHNAKYIRQNRGTSVLSDSDAGHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|298290326|ref|YP_003692265.1| ribosomal protein L35 [Starkeya novella DSM 506]
 gi|296926837|gb|ADH87646.1| ribosomal protein L35 [Starkeya novella DSM 506]
          Length = 66

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 49/66 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF ++ TGKV    AGKRHGMIKR+NK IR+ RGT V++  DA  V +
Sbjct: 1  MPKMKTKSGAKKRFKLSGTGKVVMAQAGKRHGMIKRTNKQIRDQRGTTVMSERDAFNVRK 60

Query: 61 NYLPNG 66
           YLPNG
Sbjct: 61 FYLPNG 66


>gi|157803531|ref|YP_001492080.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel]
 gi|166199829|sp|A8EY62|RL35_RICCK RecName: Full=50S ribosomal protein L35
 gi|157784794|gb|ABV73295.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel]
          Length = 68

 Score = 82.8 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S++KKRF +TA+G V A  AGK+H M +R+   IRN RGT +L + +   + +
Sbjct: 1  MPKLKTKSAAKKRFKLTASGNVIASQAGKKHFMRRRTKAQIRNLRGTTILCNQEGYNIKK 60

Query: 61 NYLPNG 66
           +LP G
Sbjct: 61 YFLPYG 66


>gi|254505188|ref|ZP_05117339.1| ribosomal protein L35 [Labrenzia alexandrii DFL-11]
 gi|222441259|gb|EEE47938.1| ribosomal protein L35 [Labrenzia alexandrii DFL-11]
          Length = 79

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA GKV+   AGKRHGMIKRSNKFIRNARGT  L+  DA KV++
Sbjct: 15 MPKLKTKSGAKKRFKVTAGGKVKCAQAGKRHGMIKRSNKFIRNARGTTTLSDQDA-KVVK 73

Query: 61 NYLPN 65
           +LP 
Sbjct: 74 QFLPY 78


>gi|310814727|ref|YP_003962691.1| 50S ribosomal protein L35 [Ketogulonicigenium vulgare Y25]
 gi|308753462|gb|ADO41391.1| 50S ribosomal protein L35 [Ketogulonicigenium vulgare Y25]
          Length = 65

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +TA G+V A  AGKRHGMIKR+NKFIR+ARGT +L++AD +K+++
Sbjct: 1  MPKMKTKSAAKKRFKVTANGRVVAGQAGKRHGMIKRTNKFIRDARGTTILSAAD-EKIVK 59

Query: 61 NYLPN 65
           YLP 
Sbjct: 60 LYLPY 64


>gi|103488417|ref|YP_617978.1| 50S ribosomal protein L35 [Sphingopyxis alaskensis RB2256]
 gi|124079036|sp|Q1GNX7|RL35_SPHAL RecName: Full=50S ribosomal protein L35
 gi|98978494|gb|ABF54645.1| LSU ribosomal protein L35P [Sphingopyxis alaskensis RB2256]
          Length = 67

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  ++K+IR  RGT VL+ ADA  V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNSKYIRTNRGTSVLSEADAAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|256060083|ref|ZP_05450265.1| hypothetical protein Bneo5_06961 [Brucella neotomae 5K33]
 gi|261324058|ref|ZP_05963255.1| 50S ribosomal protein L35 [Brucella neotomae 5K33]
 gi|261300038|gb|EEY03535.1| 50S ribosomal protein L35 [Brucella neotomae 5K33]
          Length = 66

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF  T TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 1  MPKMKTKSAAKKRFKTTGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|294013438|ref|YP_003546898.1| ribosomal protein L35 [Sphingobium japonicum UT26S]
 gi|292676768|dbj|BAI98286.1| ribosomal protein L35 [Sphingobium japonicum UT26S]
          Length = 67

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA+GKV+   AGKRH +I  + K+IR  RGT V++ AD   V R
Sbjct: 1  MPKLKTKSGVKKRFKFTASGKVKHGVAGKRHRLISHNAKYIRQNRGTSVMSDADVAHV-R 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 LWAPYGL 66


>gi|296116374|ref|ZP_06834989.1| 50S ribosomal protein L35 [Gluconacetobacter hansenii ATCC 23769]
 gi|295977074|gb|EFG83837.1| 50S ribosomal protein L35 [Gluconacetobacter hansenii ATCC 23769]
          Length = 103

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 37  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 95

Query: 61  NYLPNGI 67
            + P G+
Sbjct: 96  QWAPYGL 102


>gi|162007983|ref|YP_459652.2| 50S ribosomal protein L35 [Erythrobacter litoralis HTCC2594]
          Length = 67

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D K V +
Sbjct: 1  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSDPDTKTVKK 60

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 61 -WAPYGL 66


>gi|268594345|ref|ZP_06128512.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|268596341|ref|ZP_06130508.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
 gi|268547734|gb|EEZ43152.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|268550129|gb|EEZ45148.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
          Length = 86

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 22 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 81

Query: 61 NYLPN 65
            LP 
Sbjct: 82 -MLPY 85


>gi|237816464|ref|ZP_04595457.1| ribosomal protein L35 [Brucella abortus str. 2308 A]
 gi|237788531|gb|EEP62746.1| ribosomal protein L35 [Brucella abortus str. 2308 A]
          Length = 73

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 8  MPKMKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 66

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 67 QFLPNGL 73


>gi|299133289|ref|ZP_07026484.1| ribosomal protein L35 [Afipia sp. 1NLS2]
 gi|298593426|gb|EFI53626.1| ribosomal protein L35 [Afipia sp. 1NLS2]
          Length = 66

 Score = 81.6 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|332188392|ref|ZP_08390116.1| ribosomal protein L35 [Sphingomonas sp. S17]
 gi|332011538|gb|EGI53619.1| ribosomal protein L35 [Sphingomonas sp. S17]
          Length = 67

 Score = 81.6 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGK++   AGKRH +I  + K+IR  RGT VL+ AD K V +
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKLKHGVAGKRHRLISHNGKYIRQNRGTSVLSDADTKTV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|115522526|ref|YP_779437.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisA53]
 gi|122297812|sp|Q07UC7|RL35_RHOP5 RecName: Full=50S ribosomal protein L35
 gi|115516473|gb|ABJ04457.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisA53]
          Length = 66

 Score = 81.6 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVMSAHAGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|298369382|ref|ZP_06980700.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283385|gb|EFI24872.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 86

 Score = 81.6 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 22 MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 81

Query: 61 NYLPN 65
            LP 
Sbjct: 82 -MLPY 85


>gi|118591291|ref|ZP_01548689.1| 50S ribosomal protein L35 [Stappia aggregata IAM 12614]
 gi|118435963|gb|EAV42606.1| 50S ribosomal protein L35 [Stappia aggregata IAM 12614]
          Length = 65

 Score = 81.3 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+A  AGKRHGMIKR+NKFIR+ARGT  L+  DAK +++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKAAQAGKRHGMIKRTNKFIRDARGTTTLSDQDAK-IVK 59

Query: 61 NYLPN 65
           +LP 
Sbjct: 60 QFLPY 64


>gi|16125298|ref|NP_419862.1| 50S ribosomal protein L35 [Caulobacter crescentus CB15]
 gi|221234035|ref|YP_002516471.1| 50S ribosomal protein L35 [Caulobacter crescentus NA1000]
 gi|20139680|sp|Q9A9E2|RL35_CAUCR RecName: Full=50S ribosomal protein L35
 gi|254802441|sp|B8H309|RL35_CAUCN RecName: Full=50S ribosomal protein L35
 gi|13422342|gb|AAK23030.1| ribosomal protein L35 [Caulobacter crescentus CB15]
 gi|220963207|gb|ACL94563.1| LSU ribosomal protein L35P [Caulobacter crescentus NA1000]
          Length = 66

 Score = 81.3 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADAK +IR
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKLKAGVAGKRHRLIGHNGKYIRQNRGTKVMSEADAK-IIR 59

Query: 61 NYLPNGI 67
           YLP G+
Sbjct: 60 TYLPYGL 66


>gi|163732660|ref|ZP_02140105.1| ribosomal protein L35 [Roseobacter litoralis Och 149]
 gi|161394020|gb|EDQ18344.1| ribosomal protein L35 [Roseobacter litoralis Och 149]
          Length = 66

 Score = 81.3 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV    AGKRHGMIKRS KFIR+ARGT VL+  DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVIGGQAGKRHGMIKRSKKFIRDARGTTVLSEPDA-KIIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|326405408|ref|YP_004285490.1| 50S ribosomal protein L35 [Acidiphilium multivorum AIU301]
 gi|325052270|dbj|BAJ82608.1| 50S ribosomal protein L35 [Acidiphilium multivorum AIU301]
          Length = 74

 Score = 81.3 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RGTM L   D K V +
Sbjct: 8  MPKMKTKSSVKKRFKITATGKVMAGHGNKRHGLINRSQKMKRTNRGTMALPEQDGKTV-K 66

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 67 QWAPYGL 73


>gi|328541819|ref|YP_004301928.1| 50S ribosomal protein L35 [polymorphum gilvum SL003B-26A1]
 gi|326411571|gb|ADZ68634.1| 50S ribosomal protein L35 [Polymorphum gilvum SL003B-26A1]
          Length = 65

 Score = 80.9 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV+   AGKRHGMIKR+ KF+RNARGT  LA  DAK +++
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKVKTGQAGKRHGMIKRTAKFVRNARGTTTLADQDAK-IVK 59

Query: 61 NYLPNG 66
           +LP G
Sbjct: 60 QFLPYG 65


>gi|163757702|ref|ZP_02164791.1| 50S ribosomal protein L35 [Hoeflea phototrophica DFL-43]
 gi|162285204|gb|EDQ35486.1| 50S ribosomal protein L35 [Hoeflea phototrophica DFL-43]
          Length = 66

 Score = 80.9 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ITATGKV++ AAGKRHGMIKRSNKFIR+ARGTMVL+  DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKITATGKVKSAAAGKRHGMIKRSNKFIRDARGTMVLSEPDAK-IVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 KFLPNGL 66


>gi|90421973|ref|YP_530343.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisB18]
 gi|148887103|sp|Q21C62|RL35_RHOPB RecName: Full=50S ribosomal protein L35
 gi|90103987|gb|ABD86024.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisB18]
          Length = 66

 Score = 80.9 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 46/65 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT +L   D + + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRILFKTDGENIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|295690592|ref|YP_003594285.1| 50S 50S ribosomal protein L35 [Caulobacter segnis ATCC 21756]
 gi|295432495|gb|ADG11667.1| ribosomal protein L35 [Caulobacter segnis ATCC 21756]
          Length = 66

 Score = 80.9 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADAK +IR
Sbjct: 1  MPKLKTKSGAKKRFKLTATGKLKAGVAGKRHRLIGHNGKYIRQQRGTKVMSEADAK-IIR 59

Query: 61 NYLPNGI 67
           YLP G+
Sbjct: 60 TYLPYGL 66


>gi|92115708|ref|YP_575437.1| 50S ribosomal protein L35 [Nitrobacter hamburgensis X14]
 gi|124078996|sp|Q1QS20|RL35_NITHX RecName: Full=50S ribosomal protein L35
 gi|91798602|gb|ABE60977.1| LSU ribosomal protein L35P [Nitrobacter hamburgensis X14]
          Length = 66

 Score = 80.9 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT +L   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRILFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|110678353|ref|YP_681360.1| 50S ribosomal protein L35 [Roseobacter denitrificans OCh 114]
 gi|118573020|sp|Q16BG9|RL35_ROSDO RecName: Full=50S ribosomal protein L35
 gi|109454469|gb|ABG30674.1| ribosomal protein L35 [Roseobacter denitrificans OCh 114]
          Length = 66

 Score = 80.5 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV    AGKRHGMIKR+ KFIR+ARGT VL+  DA K+I+
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIGGQAGKRHGMIKRTKKFIRDARGTTVLSEPDA-KIIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|154250674|ref|YP_001411498.1| 50S ribosomal protein L35 [Parvibaculum lavamentivorans DS-1]
 gi|171769418|sp|A7HPK8|RL35_PARL1 RecName: Full=50S ribosomal protein L35
 gi|154154624|gb|ABS61841.1| ribosomal protein L35 [Parvibaculum lavamentivorans DS-1]
          Length = 66

 Score = 80.5 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 52/65 (80%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA+GKV+    GKRHGMIKR+NK IRN RGT ++A ADA +VI+
Sbjct: 1  MPKLKTKSGTKKRFKLTASGKVKRGQTGKRHGMIKRTNKQIRNKRGTTIMADADAARVIK 60

Query: 61 NYLPN 65
          N++P 
Sbjct: 61 NFMPY 65


>gi|114767103|ref|ZP_01445986.1| 50S ribosomal protein L35 [Pelagibaca bermudensis HTCC2601]
 gi|114540756|gb|EAU43822.1| 50S ribosomal protein L35 [Roseovarius sp. HTCC2601]
          Length = 66

 Score = 80.5 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTGTGKVVAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|307943571|ref|ZP_07658915.1| ribosomal protein L35 [Roseibium sp. TrichSKD4]
 gi|307773201|gb|EFO32418.1| ribosomal protein L35 [Roseibium sp. TrichSKD4]
          Length = 65

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TA+GKV+   AGKRHGMIKR+NKFIRNARGT  L+  DAK +++
Sbjct: 1  MPKLKTKSGAKKRFKVTASGKVKTAQAGKRHGMIKRTNKFIRNARGTTTLSDQDAK-IVK 59

Query: 61 NYLPN 65
           +LP 
Sbjct: 60 QFLPY 64


>gi|197106436|ref|YP_002131813.1| ribosomal protein L35 [Phenylobacterium zucineum HLK1]
 gi|226725044|sp|B4R9C4|RL35_PHEZH RecName: Full=50S ribosomal protein L35
 gi|196479856|gb|ACG79384.1| ribosomal protein L35 [Phenylobacterium zucineum HLK1]
          Length = 66

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGK++A  AGKRH +I  + K+IR  RGT V++ ADAK +I+
Sbjct: 1  MPKLKTKSGVKKRFKMTATGKLKAGVAGKRHRLISHNGKYIRQNRGTKVMSEADAK-IIK 59

Query: 61 NYLPNGI 67
          ++LP G+
Sbjct: 60 SWLPYGL 66


>gi|163793841|ref|ZP_02187815.1| Ribosomal protein L35 [alpha proteobacterium BAL199]
 gi|159180952|gb|EDP65469.1| Ribosomal protein L35 [alpha proteobacterium BAL199]
          Length = 65

 Score = 80.1 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +T TGKVRA  A KRH +  +S K  R  RGTM+L  ADA  +I+
Sbjct: 1  MPKMKTKSSVKKRFRLTGTGKVRANVAYKRHQLSAKSVKMKRQNRGTMILCEADAG-IIK 59

Query: 61 NYLPNG 66
           ++P G
Sbjct: 60 QFMPYG 65


>gi|209883595|ref|YP_002287452.1| ribosomal protein L35 [Oligotropha carboxidovorans OM5]
 gi|226725041|sp|B6JCK7|RL35_OLICO RecName: Full=50S ribosomal protein L35
 gi|209871791|gb|ACI91587.1| ribosomal protein L35 [Oligotropha carboxidovorans OM5]
          Length = 66

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV +  AGKRHGMIKR+ K IR  RGT  L   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVVSAHAGKRHGMIKRTKKQIRQLRGTRTLFKTDGDNIKQ 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|260427167|ref|ZP_05781146.1| ribosomal protein L35 [Citreicella sp. SE45]
 gi|260421659|gb|EEX14910.1| ribosomal protein L35 [Citreicella sp. SE45]
          Length = 66

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|254467121|ref|ZP_05080532.1| ribosomal protein L35 [Rhodobacterales bacterium Y4I]
 gi|206688029|gb|EDZ48511.1| ribosomal protein L35 [Rhodobacterales bacterium Y4I]
          Length = 66

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT VL++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVIAGQAGKRHGMIKRTKKFIRDARGTTVLSAPDAK-IVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|84788673|gb|ABC64855.1| ribosomal protein L35 [Erythrobacter litoralis HTCC2594]
          Length = 69

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D K V +
Sbjct: 3  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSDPDTKTVKK 62

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 63 -WAPYGL 68


>gi|149187100|ref|ZP_01865405.1| ribosomal protein L35 [Erythrobacter sp. SD-21]
 gi|148829252|gb|EDL47698.1| ribosomal protein L35 [Erythrobacter sp. SD-21]
          Length = 69

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITATGKV+   AGKRH +   + K+IR  RGT VL+ AD K V +
Sbjct: 3  MPKLKTKSGVKKRFKITATGKVKHGVAGKRHRLSSHNAKYIRQNRGTTVLSEADWKAVKK 62

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 63 -WAPYGL 68


>gi|56698716|ref|YP_168794.1| 50S ribosomal protein L35 [Ruegeria pomeroyi DSS-3]
 gi|81676065|sp|Q5LMG4|RL35_SILPO RecName: Full=50S ribosomal protein L35
 gi|56680453|gb|AAV97119.1| ribosomal protein L35 [Ruegeria pomeroyi DSS-3]
          Length = 66

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|221638164|ref|YP_002524426.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides KD131]
 gi|221158945|gb|ACL99924.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides KD131]
          Length = 68

 Score = 79.3 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADAK +++
Sbjct: 3  MPKMKTKSAAKKRFSFTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADAK-IVK 61

Query: 61 NYLPN 65
           Y+P 
Sbjct: 62 KYMPY 66


>gi|89069713|ref|ZP_01157049.1| 50S ribosomal protein L35 [Oceanicola granulosus HTCC2516]
 gi|89044659|gb|EAR50770.1| 50S ribosomal protein L35 [Oceanicola granulosus HTCC2516]
          Length = 66

 Score = 79.3 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA G+++A  AGKRHGMIKRSNKFIR+ARGT VL+ AD +++I+
Sbjct: 1  MPKMKTKSSCKKRFKVTANGRIKAGQAGKRHGMIKRSNKFIRDARGTTVLSKAD-EQIIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|296284909|ref|ZP_06862907.1| 50S ribosomal protein L35 [Citromicrobium bathyomarinum JL354]
          Length = 67

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S  KKRF  TATGKV+   AGKRH ++  + K+IR  RGT VL+SAD   V +
Sbjct: 1  MPKMKTKSGVKKRFKFTATGKVKHGVAGKRHRLMSHNAKYIRQNRGTDVLSSADVDHVKK 60

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 61 -WAPYGL 66


>gi|83814993|ref|YP_446895.1| hypothetical protein SRU_2804 [Salinibacter ruber DSM 13855]
 gi|83756387|gb|ABC44500.1| conserved domain protein [Salinibacter ruber DSM 13855]
          Length = 115

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+     +  I+
Sbjct: 51  MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVVDDKANRDRIK 110

Query: 61  NYL 63
             L
Sbjct: 111 RML 113


>gi|144899426|emb|CAM76290.1| 50S ribosomal protein L35 [Magnetospirillum gryphiswaldense
          MSR-1]
          Length = 68

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 48/66 (72%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +TA+GKV+A AA KRH +  + N   R ARGT +L  AD +KV +
Sbjct: 1  MPKMKTKSAAKKRFKLTASGKVKAGAANKRHCLSAKPNDMKRQARGTFILFKADGEKVKQ 60

Query: 61 NYLPNG 66
           YLPNG
Sbjct: 61 YYLPNG 66


>gi|326539836|gb|ADZ88051.1| ribosomal protein L35 [Brucella melitensis M5-90]
          Length = 63

 Score = 78.6 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/64 (75%), Positives = 57/64 (89%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT S++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADA K+++ +L
Sbjct: 1  MKTKSAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADA-KIVKQFL 59

Query: 64 PNGI 67
          PNG+
Sbjct: 60 PNGL 63


>gi|254292433|ref|YP_003058456.1| ribosomal protein L35 [Hirschia baltica ATCC 49814]
 gi|254040964|gb|ACT57759.1| ribosomal protein L35 [Hirschia baltica ATCC 49814]
          Length = 66

 Score = 78.6 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF +TATGKV++  A KRHGMIKR+ K IR  RGT V+A  +A+KV +
Sbjct: 1  MPKLKTKSGVKKRFKLTATGKVKSGQANKRHGMIKRTPKQIRQQRGTTVMADNEARKV-K 59

Query: 61 NYLPNGI 67
           +LP G+
Sbjct: 60 AFLPYGL 66


>gi|77462309|ref|YP_351813.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides 2.4.1]
 gi|126461185|ref|YP_001042299.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides ATCC 17029]
 gi|146278521|ref|YP_001168680.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides ATCC 17025]
 gi|332560191|ref|ZP_08414513.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides WS8N]
 gi|148887105|sp|Q3J5M2|RL35_RHOS4 RecName: Full=50S ribosomal protein L35
 gi|166199825|sp|A3PGR1|RL35_RHOS1 RecName: Full=50S ribosomal protein L35
 gi|166199826|sp|A4WVG1|RL35_RHOS5 RecName: Full=50S ribosomal protein L35
 gi|77386727|gb|ABA77912.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides 2.4.1]
 gi|126102849|gb|ABN75527.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides ATCC 17029]
 gi|145556762|gb|ABP71375.1| LSU ribosomal protein L35P [Rhodobacter sphaeroides ATCC 17025]
 gi|332277903|gb|EGJ23218.1| 50S ribosomal protein L35 [Rhodobacter sphaeroides WS8N]
          Length = 66

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADAK +++
Sbjct: 1  MPKMKTKSAAKKRFSFTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|23015134|ref|ZP_00054919.1| COG0291: Ribosomal protein L35 [Magnetospirillum magnetotacticum
          MS-1]
 gi|83313483|ref|YP_423747.1| ribosomal protein L35 [Magnetospirillum magneticum AMB-1]
 gi|148887081|sp|Q2VYY7|RL35_MAGMM RecName: Full=50S ribosomal protein L35
 gi|82948324|dbj|BAE53188.1| Ribosomal protein L35 [Magnetospirillum magneticum AMB-1]
          Length = 67

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 44/66 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGKV+   A KRH +  +S K  R ARGT +L   D+  V +
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKVKGNVAFKRHCLSAKSQKMKRQARGTFMLFKTDSDNVKK 60

Query: 61 NYLPNG 66
           +LPNG
Sbjct: 61 YFLPNG 66


>gi|146337306|ref|YP_001202354.1| 50S ribosomal protein L35 [Bradyrhizobium sp. ORS278]
 gi|166231160|sp|A4YJM8|RL35_BRASO RecName: Full=50S ribosomal protein L35
 gi|146190112|emb|CAL74104.1| 50S ribosomal protein L35 [Bradyrhizobium sp. ORS278]
          Length = 66

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 43/65 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGKV     GKRHGMIKR+ K IR  RGT VL   D   V +
Sbjct: 1  MPKLKTKSGAKKRFKVTGTGKVMHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|163744829|ref|ZP_02152189.1| 50S ribosomal protein L35 [Oceanibulbus indolifex HEL-45]
 gi|161381647|gb|EDQ06056.1| 50S ribosomal protein L35 [Oceanibulbus indolifex HEL-45]
          Length = 66

 Score = 78.2 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV    AGK+HGMIKR+NKFIRNARGT  L+  DAK +I+
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIGSQAGKQHGMIKRTNKFIRNARGTTTLSEPDAK-IIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|296129472|ref|YP_003636722.1| ribosomal protein L35 [Cellulomonas flavigena DSM 20109]
 gi|296021287|gb|ADG74523.1| ribosomal protein L35 [Cellulomonas flavigena DSM 20109]
          Length = 64

 Score = 78.2 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T TGKV  + A  RH +  +S++  R   G +V++ AD  ++ +
Sbjct: 1  MPKNKTHSGAKKRFRVTGTGKVMREQANGRHLLEHKSSRRTRRIAGDVVVSPADTPRIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|163738457|ref|ZP_02145872.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis BS107]
 gi|163742133|ref|ZP_02149521.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis 2.10]
 gi|161384463|gb|EDQ08844.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis 2.10]
 gi|161388378|gb|EDQ12732.1| 50S ribosomal protein L35 [Phaeobacter gallaeciensis BS107]
          Length = 66

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRTRKFIRDARGTTTLSAPDAK-IVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|255261976|ref|ZP_05341318.1| ribosomal protein L35 [Thalassiobium sp. R2A62]
 gi|255104311|gb|EET46985.1| ribosomal protein L35 [Thalassiobium sp. R2A62]
          Length = 66

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+V+A  AGKRHGMIKR+NKF+RNARGT +L+  DA K+++
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRVKAGQAGKRHGMIKRTNKFLRNARGTTLLSEPDA-KIVK 59

Query: 61 NYLPN 65
          + +P 
Sbjct: 60 SMMPY 64


>gi|148261904|ref|YP_001236031.1| ribosomal protein L35 [Acidiphilium cryptum JF-5]
 gi|166231146|sp|A5G2N0|RL35_ACICJ RecName: Full=50S ribosomal protein L35
 gi|146403585|gb|ABQ32112.1| LSU ribosomal protein L35P [Acidiphilium cryptum JF-5]
          Length = 67

 Score = 77.8 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/67 (58%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RGTM L   D K V +
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVMAGHGNKRHGLINRSQKMKRTNRGTMALPEQDGKTV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|126733940|ref|ZP_01749687.1| 50S ribosomal protein L35 [Roseobacter sp. CCS2]
 gi|126716806|gb|EBA13670.1| 50S ribosomal protein L35 [Roseobacter sp. CCS2]
          Length = 66

 Score = 77.8 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATG+V A  AGKRHGMIKRSNKF+RNARGT  L+ AD   +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTATGRVLAGQAGKRHGMIKRSNKFLRNARGTTTLSKADEG-IIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|27375819|ref|NP_767348.1| 50S ribosomal protein L35 [Bradyrhizobium japonicum USDA 110]
 gi|148251834|ref|YP_001236419.1| 50S ribosomal protein L35 [Bradyrhizobium sp. BTAi1]
 gi|54036306|sp|Q89WH9|RL35_BRAJA RecName: Full=50S ribosomal protein L35
 gi|166231159|sp|A5E8L9|RL35_BRASB RecName: Full=50S ribosomal protein L35
 gi|27348957|dbj|BAC45973.1| 50S ribosomal protein L35 [Bradyrhizobium japonicum USDA 110]
 gi|146404007|gb|ABQ32513.1| LSU ribosomal protein L35P [Bradyrhizobium sp. BTAi1]
          Length = 66

 Score = 77.8 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/65 (58%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV     GKRHGMIKR+ K IR  RGT VL   D   V +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNVKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|89052941|ref|YP_508392.1| 50S ribosomal protein L35 [Jannaschia sp. CCS1]
 gi|148887077|sp|Q28V95|RL35_JANSC RecName: Full=50S ribosomal protein L35
 gi|88862490|gb|ABD53367.1| LSU ribosomal protein L35P [Jannaschia sp. CCS1]
          Length = 66

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T+TGKV A  AGK+HGMIKRSNKF+RNARGT  L++ D+ K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTSTGKVMAAQAGKQHGMIKRSNKFLRNARGTSELSAPDS-KIVK 59

Query: 61 NYLPN 65
          +Y+P 
Sbjct: 60 SYMPY 64


>gi|86140202|ref|ZP_01058764.1| ribosomal protein L35 [Roseobacter sp. MED193]
 gi|85823139|gb|EAQ43352.1| ribosomal protein L35 [Roseobacter sp. MED193]
          Length = 66

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGK+HGMIKR+ KFIRNARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAAQAGKQHGMIKRTKKFIRNARGTSELSAPDA-KIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|126738877|ref|ZP_01754573.1| ribosomal protein L35 [Roseobacter sp. SK209-2-6]
 gi|126720058|gb|EBA16765.1| ribosomal protein L35 [Roseobacter sp. SK209-2-6]
          Length = 66

 Score = 77.8 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGK+HGMIKR+ KFIRNARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAAQAGKQHGMIKRTKKFIRNARGTSELSAPDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|254487997|ref|ZP_05101202.1| ribosomal protein L35 [Roseobacter sp. GAI101]
 gi|214044866|gb|EEB85504.1| ribosomal protein L35 [Roseobacter sp. GAI101]
          Length = 66

 Score = 77.4 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV    AGK+HGMIKRSNKF+RNARGT  L++ DAK +I+
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIGSQAGKQHGMIKRSNKFLRNARGTTALSAPDAK-IIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|260432656|ref|ZP_05786627.1| ribosomal protein L35 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416484|gb|EEX09743.1| ribosomal protein L35 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRTKKFIRDARGTTTLSAPDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|294678671|ref|YP_003579286.1| 50S ribosomal protein L35 [Rhodobacter capsulatus SB 1003]
 gi|294477491|gb|ADE86879.1| 50S ribosomal protein L35 [Rhodobacter capsulatus SB 1003]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF  TATGKV A  AGKRHGMIKRS KFIR++ GTM+L+ ADA K+++
Sbjct: 1  MPKMKTKSAAKKRFKFTATGKVIAGPAGKRHGMIKRSTKFIRDSAGTMILSDADA-KIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|84514589|ref|ZP_01001953.1| ribosomal protein L35 [Loktanella vestfoldensis SKA53]
 gi|84511640|gb|EAQ08093.1| ribosomal protein L35 [Loktanella vestfoldensis SKA53]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATG++ A  AGKRHGMIKRSNKF+RNARGT  L+  D   +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTATGRILAGQAGKRHGMIKRSNKFLRNARGTTTLSKQDEG-IIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|85709660|ref|ZP_01040725.1| ribosomal protein L35 [Erythrobacter sp. NAP1]
 gi|85688370|gb|EAQ28374.1| ribosomal protein L35 [Erythrobacter sp. NAP1]
          Length = 69

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF ITA GKV+   AGKRH +I  + K+IR  RGT VL+  D K V +
Sbjct: 3  MPKLKTKSGVKKRFKITANGKVKHGVAGKRHRLISHNAKYIRQNRGTTVLSEHDTKTVKK 62

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 63 -WAPYGL 68


>gi|83949945|ref|ZP_00958678.1| 50S ribosomal protein L35 [Roseovarius nubinhibens ISM]
 gi|83837844|gb|EAP77140.1| 50S ribosomal protein L35 [Roseovarius nubinhibens ISM]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+++A  AGKRHGMIKRS KFIR+ARGT  L+ AD +++I+
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRIKAGQAGKRHGMIKRSTKFIRDARGTTTLSKAD-EQIIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|330994701|ref|ZP_08318624.1| 50S ribosomal protein L35 [Gluconacetobacter sp. SXCC-1]
 gi|329758342|gb|EGG74863.1| 50S ribosomal protein L35 [Gluconacetobacter sp. SXCC-1]
          Length = 67

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+ VL   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQVLTEMDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|85706244|ref|ZP_01037339.1| ribosomal protein L35 [Roseovarius sp. 217]
 gi|149201233|ref|ZP_01878208.1| 50S ribosomal protein L35 [Roseovarius sp. TM1035]
 gi|85669408|gb|EAQ24274.1| ribosomal protein L35 [Roseovarius sp. 217]
 gi|149145566|gb|EDM33592.1| 50S ribosomal protein L35 [Roseovarius sp. TM1035]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+G+V A  AGKRHGMIKRSNKF+RNARGT  L+ AD   +I+
Sbjct: 1  MPKMKTKSSCKKRFKVTASGRVVAAQAGKRHGMIKRSNKFLRNARGTTTLSKADEG-IIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|110633030|ref|YP_673238.1| 50S ribosomal protein L35P [Mesorhizobium sp. BNC1]
 gi|118573012|sp|Q11KK2|RL35_MESSB RecName: Full=50S ribosomal protein L35
 gi|110284014|gb|ABG62073.1| LSU ribosomal protein L35P [Chelativorans sp. BNC1]
          Length = 66

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S+ KKRF +TATG+V+ QAAGKRHGMIKRS KFIRNARGTMVL+  D K +++
Sbjct: 1  MPKMKTKSAVKKRFKVTATGRVKVQAAGKRHGMIKRSKKFIRNARGTMVLSDPDTK-IVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 QFMPY 64


>gi|254420332|ref|ZP_05034056.1| ribosomal protein L35 [Brevundimonas sp. BAL3]
 gi|302381455|ref|YP_003817278.1| ribosomal protein L35 [Brevundimonas subvibrioides ATCC 15264]
 gi|329891066|ref|ZP_08269409.1| ribosomal protein L35 [Brevundimonas diminuta ATCC 11568]
 gi|196186509|gb|EDX81485.1| ribosomal protein L35 [Brevundimonas sp. BAL3]
 gi|302192083|gb|ADK99654.1| ribosomal protein L35 [Brevundimonas subvibrioides ATCC 15264]
 gi|328846367|gb|EGF95931.1| ribosomal protein L35 [Brevundimonas diminuta ATCC 11568]
          Length = 65

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF  TATGKV+A  AGKRH +I  ++K+IR  RGT V+A ADAKK+ +
Sbjct: 1  MPKLKTKSGAKKRFKFTATGKVKAGVAGKRHRLISHNSKYIRQNRGTSVMADADAKKI-K 59

Query: 61 NYLPN 65
          +Y+P 
Sbjct: 60 SYMPY 64


>gi|260567410|ref|ZP_05837880.1| predicted protein [Brucella suis bv. 4 str. 40]
 gi|260156928|gb|EEW92008.1| predicted protein [Brucella suis bv. 4 str. 40]
          Length = 123

 Score = 77.4 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPKMKT +++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 58  MPKMKTKTAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 116

Query: 61  NYLPNGI 67
            +LPNG+
Sbjct: 117 QFLPNGL 123


>gi|254451282|ref|ZP_05064719.1| ribosomal protein L35 [Octadecabacter antarcticus 238]
 gi|198265688|gb|EDY89958.1| ribosomal protein L35 [Octadecabacter antarcticus 238]
          Length = 66

 Score = 77.4 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 56/65 (86%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRFS+TATGKV+   AGK+HGMIKRSNKF+RNARGT +L++ DAK +I+
Sbjct: 1  MPKMKTKSSCKKRFSMTATGKVKGSQAGKQHGMIKRSNKFLRNARGTTLLSAPDAK-IIK 59

Query: 61 NYLPN 65
          +++P 
Sbjct: 60 SFMPY 64


>gi|189183697|ref|YP_001937482.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Ikeda]
 gi|226725042|sp|B3CRZ1|RL35_ORITI RecName: Full=50S ribosomal protein L35
 gi|189180468|dbj|BAG40248.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Ikeda]
          Length = 68

 Score = 77.0 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/67 (49%), Positives = 48/67 (71%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS++++GK++   AGKRH M +R+ K +RN RGT  L   DAK +I+
Sbjct: 1  MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRGTTTLIGQDAKNIIK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 YLMPYGV 67


>gi|316931435|ref|YP_004106417.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris DX-1]
 gi|315599149|gb|ADU41684.1| ribosomal protein L35 [Rhodopseudomonas palustris DX-1]
          Length = 66

 Score = 77.0 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT V+   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVVSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|260576213|ref|ZP_05844205.1| ribosomal protein L35 [Rhodobacter sp. SW2]
 gi|259021481|gb|EEW24785.1| ribosomal protein L35 [Rhodobacter sp. SW2]
          Length = 66

 Score = 77.0 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS TATG+V+A  AGKRHGMIKR+ KFIR+  GTM+L+ +DAK +++
Sbjct: 1  MPKMKTKSAAKKRFSFTATGRVKAGPAGKRHGMIKRTTKFIRDVTGTMILSPSDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|88810667|ref|ZP_01125924.1| 50S ribosomal protein L35 [Nitrococcus mobilis Nb-231]
 gi|88792297|gb|EAR23407.1| 50S ribosomal protein L35 [Nitrococcus mobilis Nb-231]
          Length = 80

 Score = 77.0 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G+ +   A   H + K+  K  R  R T ++A AD+  ++R
Sbjct: 16 MPKIKTNRGAAKRFRKTASGRYKRAHAYHNHLLTKKDPKRKRGLRATALVAPADSA-MVR 74

Query: 61 NYLPN 65
            LP 
Sbjct: 75 RLLPY 79


>gi|75674267|ref|YP_316688.1| 50S ribosomal protein L35 [Nitrobacter winogradskyi Nb-255]
 gi|85714128|ref|ZP_01045117.1| Ribosomal protein L35 [Nitrobacter sp. Nb-311A]
 gi|148887087|sp|Q3SWK5|RL35_NITWN RecName: Full=50S ribosomal protein L35
 gi|74419137|gb|ABA03336.1| LSU ribosomal protein L35P [Nitrobacter winogradskyi Nb-255]
 gi|85699254|gb|EAQ37122.1| Ribosomal protein L35 [Nitrobacter sp. Nb-311A]
          Length = 66

 Score = 77.0 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATGKV+    GKRHGMIKR+ K IR  RGT VL   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKITATGKVKHAQRGKRHGMIKRTKKQIRQLRGTRVLFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|86747170|ref|YP_483666.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris HaA2]
 gi|91974648|ref|YP_567307.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris BisB5]
 gi|123763165|sp|Q13ET3|RL35_RHOPS RecName: Full=50S ribosomal protein L35
 gi|148887102|sp|Q2J455|RL35_RHOP2 RecName: Full=50S ribosomal protein L35
 gi|86570198|gb|ABD04755.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris HaA2]
 gi|91681104|gb|ABE37406.1| LSU ribosomal protein L35P [Rhodopseudomonas palustris BisB5]
          Length = 66

 Score = 76.6 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT V+   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRVIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|254475926|ref|ZP_05089312.1| ribosomal protein L35 [Ruegeria sp. R11]
 gi|214030169|gb|EEB71004.1| ribosomal protein L35 [Ruegeria sp. R11]
          Length = 66

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAK-IVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|99082354|ref|YP_614508.1| 50S ribosomal protein L35 [Ruegeria sp. TM1040]
 gi|259418161|ref|ZP_05742080.1| ribosomal protein L35 [Silicibacter sp. TrichCH4B]
 gi|124079032|sp|Q1GDM0|RL35_SILST RecName: Full=50S ribosomal protein L35
 gi|99038634|gb|ABF65246.1| LSU ribosomal protein L35P [Ruegeria sp. TM1040]
 gi|259347067|gb|EEW58881.1| ribosomal protein L35 [Silicibacter sp. TrichCH4B]
          Length = 66

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DA K+++
Sbjct: 1  MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDA-KIVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|312139881|ref|YP_004007217.1| 50S ribosomal protein l35 rpmi [Rhodococcus equi 103S]
 gi|325674241|ref|ZP_08153930.1| 50S ribosomal protein L35 [Rhodococcus equi ATCC 33707]
 gi|311889220|emb|CBH48534.1| 50S ribosomal protein L35 RpmI [Rhodococcus equi 103S]
 gi|325554921|gb|EGD24594.1| 50S ribosomal protein L35 [Rhodococcus equi ATCC 33707]
          Length = 64

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF ++ +GK+  Q AG+RH +  +S++  R   G  V+A  DA ++ R
Sbjct: 1  MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKSSRVTRRLDGVAVVADVDAPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|83944290|ref|ZP_00956745.1| ribosomal protein L35 [Sulfitobacter sp. EE-36]
 gi|83953331|ref|ZP_00962053.1| ribosomal protein L35 [Sulfitobacter sp. NAS-14.1]
 gi|83842299|gb|EAP81467.1| ribosomal protein L35 [Sulfitobacter sp. NAS-14.1]
 gi|83844834|gb|EAP82716.1| ribosomal protein L35 [Sulfitobacter sp. EE-36]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF I+ATGKV    AGK+HGMIKR+ KFIR+ARGT  L++ DAK +I+
Sbjct: 1  MPKMKTKSSAKKRFKISATGKVIGGQAGKQHGMIKRTKKFIRDARGTTALSAPDAK-IIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 GFMPY 64


>gi|167645157|ref|YP_001682820.1| 50S ribosomal protein L35 [Caulobacter sp. K31]
 gi|189042759|sp|B0SXZ9|RL35_CAUSK RecName: Full=50S ribosomal protein L35
 gi|167347587|gb|ABZ70322.1| ribosomal protein L35 [Caulobacter sp. K31]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF ITATG ++A  AGKRH +I  + K+IR  RGT V++++D K  IR
Sbjct: 1  MPKLKTKSGAKKRFKITATGLLKAGVAGKRHRLIGHNGKYIRQNRGTKVMSASDTK-TIR 59

Query: 61 NYLPNGI 67
          +Y+P G+
Sbjct: 60 SYMPYGL 66


>gi|288959442|ref|YP_003449783.1| large subunit ribosomal protein L35 [Azospirillum sp. B510]
 gi|288911750|dbj|BAI73239.1| large subunit ribosomal protein L35 [Azospirillum sp. B510]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 49/65 (75%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKVRAQAA KRH + ++S    RNARG M L  ++A+ V++
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVRAQAAYKRHCLEQKSPNMKRNARGMMTLCDSNARTVLK 60

Query: 61 NYLPN 65
          N+L N
Sbjct: 61 NWLRN 65


>gi|114706184|ref|ZP_01439087.1| 50S ribosomal protein L35 [Fulvimarina pelagi HTCC2506]
 gi|114539030|gb|EAU42151.1| 50S ribosomal protein L35 [Fulvimarina pelagi HTCC2506]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRFS+TATG+V+A  AGKRHGMIKRSN FIR+ARG+ +L+  D +++++
Sbjct: 1  MPKMKTKSSAKKRFSMTATGRVKAGHAGKRHGMIKRSNDFIRDARGSKLLSKPD-ERIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 LYMPY 64


>gi|119385006|ref|YP_916062.1| 50S ribosomal protein L35 [Paracoccus denitrificans PD1222]
 gi|166199813|sp|A1B4C2|RL35_PARDP RecName: Full=50S ribosomal protein L35
 gi|119374773|gb|ABL70366.1| LSU ribosomal protein L35P [Paracoccus denitrificans PD1222]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRFS+TATGKV+A  AGKRHGMIKRS KFIR+  GTM+L+ ADAK +++
Sbjct: 1  MPKMKTKSAAKKRFSMTATGKVKAGPAGKRHGMIKRSTKFIRDVTGTMILSDADAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|56552412|ref|YP_163251.1| 50S ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761545|ref|ZP_04759632.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ATCC
          10988]
 gi|260753910|ref|YP_003226803.1| 50S ribosomal protein L35 [Zymomonas mobilis subsp. mobilis NCIMB
          11163]
 gi|81677172|sp|Q5NMC0|RL35_ZYMMO RecName: Full=50S ribosomal protein L35
 gi|56543986|gb|AAV90140.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373853|gb|EER63386.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis ATCC
          10988]
 gi|258553273|gb|ACV76219.1| ribosomal protein L35 [Zymomonas mobilis subsp. mobilis NCIMB
          11163]
          Length = 67

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S  KKRF  TA GKV+   AGKRH +I  + K+IR  R T V++S +  + I+
Sbjct: 1  MPKLKTKSGVKKRFKFTANGKVKHGVAGKRHRLISHNAKYIRQHRRTDVVSSTE-NRTIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 AWAPYGL 66


>gi|84500416|ref|ZP_00998665.1| ribosomal protein L35 [Oceanicola batsensis HTCC2597]
 gi|84391369|gb|EAQ03701.1| ribosomal protein L35 [Oceanicola batsensis HTCC2597]
          Length = 66

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF I+A GKV A  AGKRHGMIKR+NKFIR+ARGT  L+  DA K+I+
Sbjct: 1  MPKMKTKSSCKKRFKISAKGKVIAAQAGKRHGMIKRTNKFIRDARGTTTLSEPDA-KIIK 59

Query: 61 NYLPN 65
          + +P 
Sbjct: 60 SMMPY 64


>gi|226306781|ref|YP_002766741.1| 50S ribosomal protein L35 [Rhodococcus erythropolis PR4]
 gi|229492709|ref|ZP_04386510.1| ribosomal protein L35 [Rhodococcus erythropolis SK121]
 gi|259647410|sp|C1A067|RL35_RHOE4 RecName: Full=50S ribosomal protein L35
 gi|226185898|dbj|BAH34002.1| 50S ribosomal protein L35 [Rhodococcus erythropolis PR4]
 gi|229320368|gb|EEN86188.1| ribosomal protein L35 [Rhodococcus erythropolis SK121]
          Length = 64

 Score = 76.2 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S + KRF ++ +GK+  Q AG+RH +  +S++  R   G  V++  DA ++ R
Sbjct: 1  MPKMKSHSGASKRFKVSGSGKLMRQKAGRRHLLEHKSSRVTRRLDGVAVVSPDDAPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|304394037|ref|ZP_07375960.1| ribosomal protein L35 [Ahrensia sp. R2A130]
 gi|303293477|gb|EFL87854.1| ribosomal protein L35 [Ahrensia sp. R2A130]
          Length = 67

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TA+GK++   AGK+HGMIKRSNKF+RNARGTMVL+  D  ++++
Sbjct: 1  MPKMKTKSSVKKRFKVTASGKLKVGQAGKQHGMIKRSNKFLRNARGTMVLSEPDT-RIVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 KFMPY 64


>gi|257456995|ref|ZP_05622176.1| ribosomal protein L35 [Treponema vincentii ATCC 35580]
 gi|257445704|gb|EEV20766.1| ribosomal protein L35 [Treponema vincentii ATCC 35580]
          Length = 68

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S++ KRF +T +GKV+ +    RH + K+S +  R+ R   +LA  D+KKV +
Sbjct: 1  MPKMKSKSAAAKRFKLTGSGKVKYKQMNLRHILTKKSPQRKRDLRKGGILAEVDSKKVRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|209545207|ref|YP_002277436.1| 50S ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl
          5]
 gi|209532884|gb|ACI52821.1| ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 67

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|258542126|ref|YP_003187559.1| 50S ribosomal protein L35 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633204|dbj|BAH99179.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636263|dbj|BAI02232.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639316|dbj|BAI05278.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642372|dbj|BAI08327.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645427|dbj|BAI11375.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648480|dbj|BAI14421.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651533|dbj|BAI17467.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO
          3283-01-42C]
 gi|256654524|dbj|BAI20451.1| LSU ribosomal protein L35P [Acetobacter pasteurianus IFO 3283-12]
          Length = 66

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV +   GKRHG+IKR+ K  R+ARGT  +   D  + ++
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVLSGPCGKRHGLIKRTQKMKRSARGTQTMTPQDG-RTVK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|126728339|ref|ZP_01744155.1| 50S ribosomal protein L35 [Sagittula stellata E-37]
 gi|126711304|gb|EBA10354.1| 50S ribosomal protein L35 [Sagittula stellata E-37]
          Length = 66

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF ++ATGKV A  AGKRHGMIKR  KFIR+ARGT  L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKVSATGKVIAGQAGKRHGMIKRHKKFIRDARGTTTLSAPDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 GYMPY 64


>gi|83594850|ref|YP_428602.1| 50S ribosomal protein L35P [Rhodospirillum rubrum ATCC 11170]
 gi|148887104|sp|Q2RNI0|RL35_RHORT RecName: Full=50S ribosomal protein L35
 gi|83577764|gb|ABC24315.1| LSU ribosomal protein L35P [Rhodospirillum rubrum ATCC 11170]
          Length = 65

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS+T TGK++ + A K H +  +  K  R ARGT +L  AD +++++
Sbjct: 1  MPKLKTKSAVKKRFSLTGTGKIKVKVAYKSHLLSNKGTKMKRQARGTFILCDAD-QRIVK 59

Query: 61 NYLPNG 66
           ++P G
Sbjct: 60 KFMPYG 65


>gi|332670157|ref|YP_004453165.1| 50S ribosomal protein L35 [Cellulomonas fimi ATCC 484]
 gi|332339195|gb|AEE45778.1| ribosomal protein L35 [Cellulomonas fimi ATCC 484]
          Length = 64

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  + A  RH +  +S++  R   G +V+++AD  K+ +
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANGRHLLEHKSSRRTRRIAGDVVVSAADTPKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|159042786|ref|YP_001531580.1| 50S ribosomal protein L35 [Dinoroseobacter shibae DFL 12]
 gi|189042767|sp|A8LLG9|RL35_DINSH RecName: Full=50S ribosomal protein L35
 gi|157910546|gb|ABV91979.1| 50S ribosomal protein L35 [Dinoroseobacter shibae DFL 12]
          Length = 66

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TATGKVRA  AGKRHGMIKR+ KFIR ARGT +L++ DAK +++
Sbjct: 1  MPKMKTKSSAKKRFKMTATGKVRAGQAGKRHGMIKRTTKFIRTARGTTILSAPDAK-IVK 59

Query: 61 NYLPN 65
          +Y+P 
Sbjct: 60 SYMPY 64


>gi|58038739|ref|YP_190703.1| 50S ribosomal protein L35 [Gluconobacter oxydans 621H]
 gi|81672746|sp|Q5FU99|RL35_GLUOX RecName: Full=50S ribosomal protein L35
 gi|58001153|gb|AAW60047.1| LSU ribosomal protein L35P [Gluconobacter oxydans 621H]
          Length = 67

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV      KRHG+I R  K  R  RG   +   DAK  I+
Sbjct: 1  MPKMKTKSSVKKRFKITATGKVMCGPGNKRHGLINRPQKMKRTNRGPQTMTDMDAK-TIK 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|149913186|ref|ZP_01901720.1| ribosomal protein L35 [Roseobacter sp. AzwK-3b]
 gi|149813592|gb|EDM73418.1| ribosomal protein L35 [Roseobacter sp. AzwK-3b]
          Length = 66

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF +TATGK++   AGKRHGMIKR+ KFIR+ARGT V++ ADAK ++R
Sbjct: 1  MPKMKTKSSCKKRFKVTATGKIKTAQAGKRHGMIKRTKKFIRDARGTTVMSEADAK-IVR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 PMMPY 64


>gi|39933119|ref|NP_945395.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris CGA009]
 gi|192288473|ref|YP_001989078.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris TIE-1]
 gi|54036265|sp|Q6NDR5|RL35_RHOPA RecName: Full=50S ribosomal protein L35; AltName: Full=RRP-L35
 gi|226725057|sp|B3Q5X3|RL35_RHOPT RecName: Full=50S ribosomal protein L35
 gi|39652744|emb|CAE25483.1| 50S ribosomal protein L35 [Rhodopseudomonas palustris CGA009]
 gi|192282222|gb|ACE98602.1| ribosomal protein L35 [Rhodopseudomonas palustris TIE-1]
          Length = 66

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 44/65 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +TATGKV +   GKRHGMIKR+ K IR  RGT  +   D   + +
Sbjct: 1  MPKLKTKSGAKKRFKVTATGKVMSAQRGKRHGMIKRTKKQIRQLRGTRAIFKTDGDNIKK 60

Query: 61 NYLPN 65
           +LPN
Sbjct: 61 YFLPN 65


>gi|296394205|ref|YP_003659089.1| 50S ribosomal protein L35 [Segniliparus rotundus DSM 44985]
 gi|296181352|gb|ADG98258.1| ribosomal protein L35 [Segniliparus rotundus DSM 44985]
          Length = 64

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GK+  Q AGKRH +  +     R   G + +A+ D K+V R
Sbjct: 1  MPKNKTHSGASKRFKVTGSGKLVRQQAGKRHNLEVKPTTLTRRLDGVVDVAAPDVKRVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|148284325|ref|YP_001248415.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Boryong]
 gi|166199810|sp|A5CCZ3|RL35_ORITB RecName: Full=50S ribosomal protein L35
 gi|146739764|emb|CAM79623.1| 50S ribosomal protein L35 [Orientia tsutsugamushi str. Boryong]
          Length = 68

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/67 (47%), Positives = 47/67 (70%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S+ KKRFS++++GK++   AGKRH M +R+ K +RN R T  L   DAK +I+
Sbjct: 1  MPKLKTKSAVKKRFSLSSSGKLKVTQAGKRHFMRRRTKKQLRNLRSTTTLIGQDAKNIIK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 YLMPYGV 67


>gi|83944916|ref|ZP_00957282.1| ribosomal protein L35 [Oceanicaulis alexandrii HTCC2633]
 gi|83851698|gb|EAP89553.1| ribosomal protein L35 [Oceanicaulis alexandrii HTCC2633]
          Length = 67

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 48/65 (73%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF +TA+GKV A  AGKRHGMIKR+ K IR  RGT  LA+ DAK V R
Sbjct: 1  MSKLKTKSSAKKRFKVTASGKVLAGQAGKRHGMIKRTPKQIRQKRGTTALAAPDAKVVKR 60

Query: 61 NYLPN 65
           Y+P 
Sbjct: 61 TYMPY 65


>gi|330813584|ref|YP_004357823.1| LSU ribosomal protein L35p [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486679|gb|AEA81084.1| LSU ribosomal protein L35p [Candidatus Pelagibacter sp. IMCC9063]
          Length = 68

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF  TATGKV+A  AGKRHGMIKR+N  IR  RGT VL+  DAK +I+
Sbjct: 1  MAKLKTKSSAKKRFKFTATGKVKAPQAGKRHGMIKRTNAQIRKLRGTTVLSKQDAK-IIK 59

Query: 61 NYLPNGI 67
          +++P G+
Sbjct: 60 SFMPYGV 66


>gi|269956117|ref|YP_003325906.1| 50S ribosomal protein L35 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304798|gb|ACZ30348.1| ribosomal protein L35 [Xylanimonas cellulosilytica DSM 15894]
          Length = 64

 Score = 74.7 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  + A  RH +  + +   R      V+A AD KK+ +
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANARHLLEHKPSTRTRRLAQDQVVAPADVKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|322436972|ref|YP_004219184.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX9]
 gi|321164699|gb|ADW70404.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX9]
          Length = 108

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK+KT+S + KRF+ T TGK +   +  RH +  ++NK       + +++ AD   V R
Sbjct: 44  MPKLKTHSGAAKRFTKTGTGKFKRGHSKMRHILTSKNNKTKSRLGKSGLVSDADHYNVSR 103

Query: 61  NYLPN 65
             LP 
Sbjct: 104 -MLPY 107


>gi|114568682|ref|YP_755362.1| 50S ribosomal protein L35P [Maricaulis maris MCS10]
 gi|122316993|sp|Q0ATG3|RL35_MARMM RecName: Full=50S ribosomal protein L35
 gi|114339144|gb|ABI64424.1| LSU ribosomal protein L35P [Maricaulis maris MCS10]
          Length = 66

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT S +KKRF +TA+GKV+A  AGKRHGMIKR+ K IRN RG + L+  DA K+++
Sbjct: 1  MSKMKTKSGAKKRFKLTASGKVKAGQAGKRHGMIKRTPKQIRNKRGQVTLSPQDA-KIVK 59

Query: 61 NYLPNGI 67
           YLPNG+
Sbjct: 60 KYLPNGL 66


>gi|282877701|ref|ZP_06286516.1| ribosomal protein L35 [Prevotella buccalis ATCC 35310]
 gi|281300273|gb|EFA92627.1| ribosomal protein L35 [Prevotella buccalis ATCC 35310]
          Length = 65

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRFS T TGK++   A   H + K++ K  RN  G  ++ SA+ K+V 
Sbjct: 1  MPKLKTNSGAKKRFSFTGTGKIKRNHAYHSHILTKKTKKQKRNLVGYTLVDSANVKQVR 59


>gi|315498800|ref|YP_004087604.1| ribosomal protein l35 [Asticcacaulis excentricus CB 48]
 gi|315416812|gb|ADU13453.1| ribosomal protein L35 [Asticcacaulis excentricus CB 48]
          Length = 65

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF  TA+GKV+A  AGKRH +I  + K+IR  RGT V++ AD  K+ +
Sbjct: 1  MSKLKTKSGAKKRFRFTASGKVKAGVAGKRHRLISHNGKYIRQNRGTQVMSDADTAKI-K 59

Query: 61 NYLPN 65
          +Y+P 
Sbjct: 60 SYMPY 64


>gi|84684100|ref|ZP_01012002.1| ribosomal protein L35 [Maritimibacter alkaliphilus HTCC2654]
 gi|84667853|gb|EAQ14321.1| ribosomal protein L35 [Rhodobacterales bacterium HTCC2654]
          Length = 66

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 52/65 (80%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ++ATGKV +  AGKRHGMIKR  KFIR+ARGT V+++ DAK +++
Sbjct: 1  MPKMKTKSSCKKRFKVSATGKVISGQAGKRHGMIKRHKKFIRDARGTTVMSAPDAK-IVK 59

Query: 61 NYLPN 65
          + +P 
Sbjct: 60 SMMPY 64


>gi|294673348|ref|YP_003573964.1| 50S ribosomal protein L35 [Prevotella ruminicola 23]
 gi|294472809|gb|ADE82198.1| ribosomal protein L35 [Prevotella ruminicola 23]
          Length = 65

 Score = 74.3 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRFS T TGKV+ + A   H + K++ K  RN  GT ++  ++ K+V 
Sbjct: 1  MPKVKTNSGAKKRFSFTGTGKVKRRHAFHSHILTKKTKKQKRNLVGTTIVDPSNMKQVR 59


>gi|90420460|ref|ZP_01228367.1| ribosomal protein L35 [Aurantimonas manganoxydans SI85-9A1]
 gi|90335188|gb|EAS48941.1| ribosomal protein L35 [Aurantimonas manganoxydans SI85-9A1]
          Length = 66

 Score = 74.3 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 55/65 (84%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT +S+KKRF +TA G+V+A AAGKRHGMIKRSN F+R+ARGTM+L+  D +++++
Sbjct: 1  MPKMKTKASAKKRFRMTANGRVKAGAAGKRHGMIKRSNDFLRDARGTMILSKPD-ERIVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 IYMPY 64


>gi|161620030|ref|YP_001593917.1| 50S ribosomal protein L35 [Brucella canis ATCC 23365]
 gi|189042757|sp|A9M9V1|RL35_BRUC2 RecName: Full=50S ribosomal protein L35
 gi|161336841|gb|ABX63146.1| ribosomal protein L35 [Brucella canis ATCC 23365]
          Length = 66

 Score = 73.9 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/67 (74%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT +++KKRF IT TGKV+A AAGKRHGMIKRSNKFIR+ARGTMVLA ADAK +++
Sbjct: 1  MPKMKTKTAAKKRFKITGTGKVKAAAAGKRHGMIKRSNKFIRDARGTMVLADADAK-IVK 59

Query: 61 NYLPNGI 67
           +LPNG+
Sbjct: 60 QFLPNGL 66


>gi|313673282|ref|YP_004051393.1| LSU ribosomal protein l35p [Calditerrivibrio nitroreducens DSM
          19672]
 gi|312940038|gb|ADR19230.1| LSU ribosomal protein L35P [Calditerrivibrio nitroreducens DSM
          19672]
          Length = 65

 Score = 73.9 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GK++ + +  RH +  +S+K  R  R   +L  AD   + R
Sbjct: 1  MPKVKTHRGAAKRFKVTGSGKIKYKRSFLRHILTSKSSKRKRALRHPGILEGADCANI-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|256832336|ref|YP_003161063.1| 50S ribosomal protein L35 [Jonesia denitrificans DSM 20603]
 gi|256685867|gb|ACV08760.1| ribosomal protein L35 [Jonesia denitrificans DSM 20603]
          Length = 64

 Score = 73.9 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S+   R      V++ AD KK+ +
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKIMREQANKRHLLEHKSSTRTRRLSSDQVVSDADVKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|114769956|ref|ZP_01447566.1| 50S ribosomal protein L35 [alpha proteobacterium HTCC2255]
 gi|114549661|gb|EAU52543.1| 50S ribosomal protein L35 [alpha proteobacterium HTCC2255]
          Length = 66

 Score = 73.9 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 54/65 (83%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +TA+GKV++  AGKRHGMIKRSNKF+RNARGT  L++ADA  +++
Sbjct: 1  MPKMKTKSGAKKRFKMTASGKVKSGQAGKRHGMIKRSNKFLRNARGTTTLSAADAT-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|312886255|ref|ZP_07745869.1| LSU ribosomal protein L35P [Mucilaginibacter paludis DSM 18603]
 gi|311301280|gb|EFQ78335.1| LSU ribosomal protein L35P [Mucilaginibacter paludis DSM 18603]
          Length = 85

 Score = 73.9 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRF +T TGK+  + A K H + K S K  R    T +++ AD   V R
Sbjct: 20 MPKMKTNSSAKKRFKLTGTGKITRKNAYKSHILTKMSTKRKRALGHTSLVSDADLGNVKR 79

Query: 61 NY 62
            
Sbjct: 80 ML 81


>gi|332297584|ref|YP_004439506.1| 50S ribosomal protein L35 [Treponema brennaborense DSM 12168]
 gi|332180687|gb|AEE16375.1| 50S ribosomal protein L35 [Treponema brennaborense DSM 12168]
          Length = 66

 Score = 73.9 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 42/66 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRFS+T +GKV+ +    RH + K++ K  R  R + +L+ ADA KV +
Sbjct: 1  MPKMKTKRAAAKRFSLTGSGKVKYKKMNLRHILTKKAAKRKRQLRASGILSEADAAKVRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|190575249|ref|YP_001973094.1| putative 50S ribosomal protein L35 [Stenotrophomonas maltophilia
           K279a]
 gi|190013171|emb|CAQ46804.1| putative 50S ribosomal protein L35 [Stenotrophomonas maltophilia
           K279a]
          Length = 105

 Score = 73.6 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 41  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTGHVRAEDAGRLDR 100

Query: 61  NYLPN 65
             LP 
Sbjct: 101 -MLPY 104


>gi|300021911|ref|YP_003754522.1| ribosomal protein L35 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523732|gb|ADJ22201.1| ribosomal protein L35 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 66

 Score = 73.6 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGKV A  AGKRHGMIKR+ KFI+ ARGT VL  +DAK +++
Sbjct: 1  MPKMKTKSGAKKRFKMTGTGKVVAAQAGKRHGMIKRTAKFIQKARGTGVLNDSDAK-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|162149044|ref|YP_001603505.1| 50S ribosomal protein L35 [Gluconacetobacter diazotrophicus PAl
          5]
 gi|161787621|emb|CAP57217.1| putative 50S ribosomal protein L35 [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 69

 Score = 73.6 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS KKRF ITATGKV A    KRHG+I RS K  R  RG+  L   D  + ++
Sbjct: 3  MPKMKTKSSVKKRFKITATGKVLAGPGNKRHGLINRSQKMKRTNRGSQTLTEMDG-RTVK 61

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 62 QWAPYGL 68


>gi|325109128|ref|YP_004270196.1| 50S ribosomal protein L35 [Planctomyces brasiliensis DSM 5305]
 gi|324969396|gb|ADY60174.1| 50S ribosomal protein L35 [Planctomyces brasiliensis DSM 5305]
          Length = 143

 Score = 73.6 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 1   MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           MPK KT+   +KRF ITA+GK + + A + H + K++    R  RG  V+    A K+  
Sbjct: 78  MPKQKTHKGMQKRFKITASGKAKHRKANRGHILGKKTGDRKRRLRGDGVVTGTVADKIAD 137

Query: 61  NYLP 64
              P
Sbjct: 138 ALRP 141


>gi|326382698|ref|ZP_08204389.1| 50S ribosomal protein L35 [Gordonia neofelifaecis NRRL B-59395]
 gi|326198817|gb|EGD56000.1| 50S ribosomal protein L35 [Gordonia neofelifaecis NRRL B-59395]
          Length = 64

 Score = 73.6 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF +T +GK+  Q AGKRH +  +S++  R   GT V++  DA ++ R
Sbjct: 1  MPKSKTHKGTAKRFKVTGSGKIVRQKAGKRHLLEHKSSRVTRRLDGTTVVSENDAPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|328881242|emb|CCA54481.1| LSU ribosomal protein L35p [Streptomyces venezuelae ATCC 10712]
          Length = 64

 Score = 73.6 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S+K  R   G   +A  DA K+ +
Sbjct: 1  MPKNKTHSGAKKRFKVTGSGKILRERAGKRHLLEHKSSKLTRRLTGNAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|152967112|ref|YP_001362896.1| ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
 gi|189042773|sp|A6WCU3|RL35_KINRD RecName: Full=50S ribosomal protein L35
 gi|151361629|gb|ABS04632.1| ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
          Length = 64

 Score = 73.6 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  + A KRH +  +S+K  R      V++ AD KK+ +
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANKRHLLEVKSSKRTRRLSVDQVVSPADVKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|254385011|ref|ZP_05000345.1| 50S ribosomal protein L35 [Streptomyces sp. Mg1]
 gi|194343890|gb|EDX24856.1| 50S ribosomal protein L35 [Streptomyces sp. Mg1]
          Length = 64

 Score = 73.6 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S+K  R   G   +A  DA K+ +
Sbjct: 1  MPKNKTHSGTKKRFKVTGSGKILRERAGKRHLLEHKSSKLTRRLTGNAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|330995387|ref|ZP_08319297.1| ribosomal protein L35 [Paraprevotella xylaniphila YIT 11841]
 gi|329575882|gb|EGG57406.1| ribosomal protein L35 [Paraprevotella xylaniphila YIT 11841]
          Length = 65

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF +T TGK++   A  RH + K++ K  RN     ++ + + K+V 
Sbjct: 1  MPKVKTNSGAKKRFRLTGTGKIKRHHAFHRHILTKKTTKQKRNLVHDDIVVTDNMKQVR 59


>gi|312129890|ref|YP_003997230.1| lsu ribosomal protein l35p [Leadbetterella byssophila DSM 17132]
 gi|311906436|gb|ADQ16877.1| LSU ribosomal protein L35P [Leadbetterella byssophila DSM 17132]
          Length = 64

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF +T TGK++ + A   H + K+SNK  RN   T +++ AD  ++ 
Sbjct: 1  MPKQKTNSGAKKRFKLTGTGKIKRKHAFHSHILTKKSNKRKRNLVTTTLVSPADEGRIK 59


>gi|227494665|ref|ZP_03924981.1| ribosomal protein L35 [Actinomyces coleocanis DSM 15436]
 gi|226831847|gb|EEH64230.1| ribosomal protein L35 [Actinomyces coleocanis DSM 15436]
          Length = 64

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S+   R      V+A AD K V R
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREKANKRHLLEVKSSTRTRRLSRDQVVAPADQKNVRR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|184201212|ref|YP_001855419.1| 50S ribosomal protein L35 [Kocuria rhizophila DC2201]
 gi|226725022|sp|B2GKF4|RL35_KOCRD RecName: Full=50S ribosomal protein L35
 gi|183581442|dbj|BAG29913.1| 50S ribosomal protein L35 [Kocuria rhizophila DC2201]
          Length = 65

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GKV+ Q A +RH +  +S++  R   G  ++++    K I+
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLAGDQIVSTPGEAKAIK 60

Query: 61 NYL 63
            L
Sbjct: 61 RML 63


>gi|302533485|ref|ZP_07285827.1| ribosomal protein L35 [Streptomyces sp. C]
 gi|302442380|gb|EFL14196.1| ribosomal protein L35 [Streptomyces sp. C]
          Length = 64

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GKV  + AGKRH +  +S++  R   G   +A  DA K+ +
Sbjct: 1  MPKNKTHSGTKKRFKVTGSGKVLRERAGKRHLLEHKSSRITRRLTGNAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|269795536|ref|YP_003314991.1| 50S ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
 gi|269097721|gb|ACZ22157.1| LSU ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
          Length = 64

 Score = 73.2 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 41/62 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  + A KRH +  +S++  R   G +V+++AD KK+ +
Sbjct: 1  MPKNKTHSGAKKRFRITGSGKVMREQANKRHLLEHKSSRRKRRLSGDLVVSAADVKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|182439699|ref|YP_001827418.1| 50S ribosomal protein L35 [Streptomyces griseus subsp. griseus
          NBRC 13350]
 gi|239940056|ref|ZP_04691993.1| 50S ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|239986545|ref|ZP_04707209.1| 50S ribosomal protein L35 [Streptomyces roseosporus NRRL 11379]
 gi|291443485|ref|ZP_06582875.1| ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|326780363|ref|ZP_08239628.1| 50S ribosomal protein L35 [Streptomyces cf. griseus XylebKG-1]
 gi|226725068|sp|B1W353|RL35_STRGG RecName: Full=50S ribosomal protein L35
 gi|62896305|emb|CAH94291.1| ribosomal protein L35 [Streptomyces griseus subsp. griseus]
 gi|178468215|dbj|BAG22735.1| putative ribosomal protein L35 [Streptomyces griseus subsp.
          griseus NBRC 13350]
 gi|291346432|gb|EFE73336.1| ribosomal protein L35 [Streptomyces roseosporus NRRL 15998]
 gi|320011786|gb|ADW06636.1| ribosomal protein L35 [Streptomyces flavogriseus ATCC 33331]
 gi|326660696|gb|EGE45542.1| 50S ribosomal protein L35 [Streptomyces cf. griseus XylebKG-1]
          Length = 64

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 43/62 (69%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF IT +GKV  + AGKRH +  +S+K  R+  GT+V+A ADAKK+ +
Sbjct: 1  MPKNKTHSGASKRFKITGSGKVLRERAGKRHLLEHKSSKKTRSLTGTVVVAPADAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|256394618|ref|YP_003116182.1| 50S ribosomal protein L35 [Catenulispora acidiphila DSM 44928]
 gi|256360844|gb|ACU74341.1| ribosomal protein L35 [Catenulispora acidiphila DSM 44928]
          Length = 64

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S SKKRF +T +GK+    AG RH   ++S+++ R   G + +A +D K++ R
Sbjct: 1  MPKQKTHSGSKKRFKVTGSGKIMRGQAGMRHNFERKSSEYTRQHTGEVEVAKSDVKRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|317124676|ref|YP_004098788.1| 50S ribosomal protein L35P [Intrasporangium calvum DSM 43043]
 gi|315588764|gb|ADU48061.1| LSU ribosomal protein L35P [Intrasporangium calvum DSM 43043]
          Length = 64

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 42/62 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF IT TGKV  + AG RH +  +S+K +R+    +V+A  DAKKV +
Sbjct: 1  MPKMKTHSGAKKRFRITGTGKVMREQAGGRHLLEHKSSKKMRSIANDLVVAPEDAKKVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|114328167|ref|YP_745324.1| 50S ribosomal protein L35 [Granulibacter bethesdensis CGDNIH1]
 gi|122326874|sp|Q0BS01|RL35_GRABC RecName: Full=50S ribosomal protein L35
 gi|114316341|gb|ABI62401.1| LSU ribosomal protein L35P [Granulibacter bethesdensis CGDNIH1]
          Length = 67

 Score = 72.8 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRF ITATGKV A    KRH +  RS K  R  RG+ VL  AD   V +
Sbjct: 1  MPKLKTKSSVKKRFKITATGKVLAGPGKKRHNLSARSQKAKRQNRGSQVLTHADGLTV-K 59

Query: 61 NYLPNGI 67
           + P G+
Sbjct: 60 QWAPYGL 66


>gi|262202746|ref|YP_003273954.1| 50S ribosomal protein L35 [Gordonia bronchialis DSM 43247]
 gi|262086093|gb|ACY22061.1| ribosomal protein L35 [Gordonia bronchialis DSM 43247]
          Length = 64

 Score = 72.8 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF +T +GK+  Q A +RH +  +S++  R   GT V++  DA ++ R
Sbjct: 1  MPKSKTHKGTAKRFKVTGSGKIVRQKANRRHLLEHKSSRRTRRLDGTTVVSENDAPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|111017976|ref|YP_700948.1| 50S ribosomal protein L35 [Rhodococcus jostii RHA1]
 gi|226360107|ref|YP_002777885.1| 50S ribosomal protein L35 [Rhodococcus opacus B4]
 gi|118573019|sp|Q0SI46|RL35_RHOSR RecName: Full=50S ribosomal protein L35
 gi|254802467|sp|C1AT08|RL35_RHOOB RecName: Full=50S ribosomal protein L35
 gi|110817506|gb|ABG92790.1| 50S ribosomal protein L35 [Rhodococcus jostii RHA1]
 gi|226238592|dbj|BAH48940.1| 50S ribosomal protein L35 [Rhodococcus opacus B4]
          Length = 64

 Score = 72.8 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF ++ +GK+  Q AG+RH +  ++ K  R   G  V++ AD  ++ R
Sbjct: 1  MPKSKTHSGTAKRFKVSGSGKILRQKAGRRHLLEHKATKVTRRLDGVAVVSKADTPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|239917949|ref|YP_002957507.1| LSU ribosomal protein L35P [Micrococcus luteus NCTC 2665]
 gi|289704522|ref|ZP_06500957.1| ribosomal protein L35 [Micrococcus luteus SK58]
 gi|259647359|sp|C5CAP9|RL35_MICLC RecName: Full=50S ribosomal protein L35
 gi|239839156|gb|ACS30953.1| LSU ribosomal protein L35P [Micrococcus luteus NCTC 2665]
 gi|289558780|gb|EFD52036.1| ribosomal protein L35 [Micrococcus luteus SK58]
          Length = 64

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK+  Q A +RH +  +S++  R  +G  +++    K++ R
Sbjct: 1  MPKMKTHSGAKKRFRVTGSGKIMRQQANRRHYLEHKSSRLTRRLKGDQLVSKGSIKQIKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|254821221|ref|ZP_05226222.1| 50S ribosomal protein L35 [Mycobacterium intracellulare ATCC
          13950]
          Length = 64

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  +  K  R   G  V+A+ DA+++ R
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTVVAANDAQRINR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|126725096|ref|ZP_01740939.1| 50S ribosomal protein L35 [Rhodobacterales bacterium HTCC2150]
 gi|126706260|gb|EBA05350.1| 50S ribosomal protein L35 [Rhodobacterales bacterium HTCC2150]
          Length = 66

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +TA G ++A  AGKRHGMIKRS KFIR ARGT +L+  DA  +++
Sbjct: 1  MPKMKTKSSAKKRFKVTANGHIKAGHAGKRHGMIKRSTKFIRTARGTRLLSKPDAA-IVK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|154490250|ref|ZP_02030511.1| hypothetical protein PARMER_00482 [Parabacteroides merdae ATCC
          43184]
 gi|218259671|ref|ZP_03475320.1| hypothetical protein PRABACTJOHN_00979 [Parabacteroides johnsonii
          DSM 18315]
 gi|154089142|gb|EDN88186.1| hypothetical protein PARMER_00482 [Parabacteroides merdae ATCC
          43184]
 gi|218224964|gb|EEC97614.1| hypothetical protein PRABACTJOHN_00979 [Parabacteroides johnsonii
          DSM 18315]
          Length = 65

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 40/62 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T TGK++ + A K H + K++ K  RN   T ++AS D   V +
Sbjct: 1  MPKMKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTTKQKRNLTHTGLVASVDVSNVKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|134101783|ref|YP_001107444.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
 gi|291009828|ref|ZP_06567801.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
 gi|166199831|sp|A4FKE4|RL35_SACEN RecName: Full=50S ribosomal protein L35
 gi|133914406|emb|CAM04519.1| 50S ribosomal protein L35 [Saccharopolyspora erythraea NRRL 2338]
          Length = 64

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 41/62 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GK+R + AG+RH + K+S++  R   GT  +A AD K++ +
Sbjct: 1  MPKNKTHSGTAKRFRVTGSGKLRREQAGRRHILEKKSSRVTRRLEGTEAVAKADVKRINK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|311894942|dbj|BAJ27350.1| putative ribosomal protein L35 [Kitasatospora setae KM-6054]
          Length = 64

 Score = 72.0 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF IT +GKV  + AG+RH +  + +   R   GT+ LA  DAKK+ +
Sbjct: 1  MPKQKTHSGASKRFKITGSGKVLRERAGRRHLLEHKPSTLTRKLAGTVELAPGDAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|329849636|ref|ZP_08264482.1| ribosomal protein L35 [Asticcacaulis biprosthecum C19]
 gi|328841547|gb|EGF91117.1| ribosomal protein L35 [Asticcacaulis biprosthecum C19]
          Length = 65

 Score = 72.0 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF  TA+GK +A  AGKRH +I  + K+IR  RGT V++ AD  K+ +
Sbjct: 1  MSKLKTKSGAKKRFRFTASGKAKAGVAGKRHRLISHNGKYIRQNRGTQVMSDADTIKI-K 59

Query: 61 NYLPN 65
          +Y+P 
Sbjct: 60 SYMPY 64


>gi|116670039|ref|YP_830972.1| 50S ribosomal protein L35 [Arthrobacter sp. FB24]
 gi|220912250|ref|YP_002487559.1| 50S ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
 gi|325962864|ref|YP_004240770.1| 50S ribosomal protein L35P [Arthrobacter phenanthrenivorans
          Sphe3]
 gi|166231153|sp|A0JV02|RL35_ARTS2 RecName: Full=50S ribosomal protein L35
 gi|254802428|sp|B8HGA8|RL35_ARTCA RecName: Full=50S ribosomal protein L35
 gi|116610148|gb|ABK02872.1| LSU ribosomal protein L35P [Arthrobacter sp. FB24]
 gi|219859128|gb|ACL39470.1| ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
 gi|323468951|gb|ADX72636.1| LSU ribosomal protein L35P [Arthrobacter phenanthrenivorans
          Sphe3]
          Length = 64

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK+R Q A +RH +  +S++  R   G  ++   DAK + +
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKLRRQQANRRHYLEHKSSRLTRRLAGDKIVFKGDAKVIRK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|154509024|ref|ZP_02044666.1| hypothetical protein ACTODO_01541 [Actinomyces odontolyticus ATCC
          17982]
 gi|293192346|ref|ZP_06609457.1| ribosomal protein L35 [Actinomyces odontolyticus F0309]
 gi|153798658|gb|EDN81078.1| hypothetical protein ACTODO_01541 [Actinomyces odontolyticus ATCC
          17982]
 gi|292820261|gb|EFF79255.1| ribosomal protein L35 [Actinomyces odontolyticus F0309]
          Length = 64

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF  T +GK+  + AG RH +  +S++  R      VL +AD K+V R
Sbjct: 1  MPKNKTHSGAKKRFRTTGSGKIMREQAGARHLLEHKSSRKTRRLATDQVLETADVKRVKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|71083146|ref|YP_265865.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1062]
 gi|91762423|ref|ZP_01264388.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1002]
 gi|148887091|sp|Q4FNH7|RL35_PELUB RecName: Full=50S ribosomal protein L35
 gi|71062259|gb|AAZ21262.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1062]
 gi|91718225|gb|EAS84875.1| 50S ribosomal protein L35 [Candidatus Pelagibacter ubique
          HTCC1002]
          Length = 68

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF I+ATGKV    AGKRHGMIKR+N  IR  RGT  ++  D K +++
Sbjct: 1  MPKLKTKSSAKKRFKISATGKVMMAQAGKRHGMIKRTNSQIRKLRGTTAMSKQDGK-IVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|282864275|ref|ZP_06273331.1| ribosomal protein L35 [Streptomyces sp. ACTE]
 gi|282560762|gb|EFB66308.1| ribosomal protein L35 [Streptomyces sp. ACTE]
          Length = 64

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 42/62 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF IT +GKV  + AGKRH +  +S+K  R+  GT V+A ADAKK+ +
Sbjct: 1  MPKNKTHSGASKRFKITGSGKVLREKAGKRHLLEHKSSKKTRSLTGTTVVAPADAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|87306633|ref|ZP_01088780.1| 50S ribosomal protein L35-like [Blastopirellula marina DSM 3645]
 gi|87290812|gb|EAQ82699.1| 50S ribosomal protein L35-like [Blastopirellula marina DSM 3645]
          Length = 67

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKRF +TA G V+ +  G  H   + S K +RN RGT VLA  D   + +
Sbjct: 1  MPKMKTHKGTKKRFRLTANGHVKHRQCGTSHLATRLSTKRVRNLRGTRVLAEVDEVMLTK 60

Query: 61 NY 62
            
Sbjct: 61 AL 62


>gi|163839502|ref|YP_001623907.1| 50S ribosomal protein L35 [Renibacterium salmoninarum ATCC 33209]
 gi|189042781|sp|A9WQB0|RL35_RENSM RecName: Full=50S ribosomal protein L35
 gi|162952978|gb|ABY22493.1| LSU ribosomal protein L35P [Renibacterium salmoninarum ATCC
          33209]
          Length = 64

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK++ Q A +RH +  + +   R       ++ ADAK + +
Sbjct: 1  MPKMKTHSGAKKRFKLTGSGKLKRQQANRRHYLEHKPSTLTRRLAADKTVSPADAKNIKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|308176901|ref|YP_003916307.1| 50S ribosomal protein L35 [Arthrobacter arilaitensis Re117]
 gi|307744364|emb|CBT75336.1| 50S ribosomal protein L35 [Arthrobacter arilaitensis Re117]
          Length = 64

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  Q A +RH +  +S++  R      ++A AD K + R
Sbjct: 1  MPKFKTHSGAKKRFKLTGSGKLARQQANRRHYLEHKSSRVTRRLASDQIVAKADVKTIKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|290961733|ref|YP_003492915.1| 50S ribosomal protein L35 [Streptomyces scabiei 87.22]
 gi|260651259|emb|CBG74381.1| 50S ribosomal protein L35 [Streptomyces scabiei 87.22]
          Length = 64

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   GT  +A  DA K+ +
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRVTRRLTGTAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|82523878|emb|CAI78601.1| 50S ribosomal protein L35 [uncultured delta proteobacterium]
          Length = 80

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  T +GK+    A   H +  +S+   R  R + V  S + K + R
Sbjct: 16 MPKLKTKKGAAKRFRKTGSGKIIRNKAYTSHLLTNKSSTQKRRLRKSSVADSTNIKAIKR 75

Query: 61 NYLPN 65
            LP 
Sbjct: 76 -MLPY 79


>gi|304320479|ref|YP_003854122.1| 50S ribosomal protein L35 [Parvularcula bermudensis HTCC2503]
 gi|303299381|gb|ADM08980.1| ribosomal protein L35 [Parvularcula bermudensis HTCC2503]
          Length = 66

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +T TGK+ A + GKRHGMIKR+ K IR  RG   L+  D +++ +
Sbjct: 1  MPKMKTKSGAKKRFKVTGTGKIMALSTGKRHGMIKRTPKQIRQKRGMEPLSEPD-QRIAK 59

Query: 61 NYLPN 65
           Y+P 
Sbjct: 60 KYMPY 64


>gi|332878461|ref|ZP_08446182.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
 gi|332683556|gb|EGJ56432.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
          Length = 65

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF +T TGKV+   A   H + K++ K  RN     ++ + + K+V 
Sbjct: 1  MPKVKTNSGAKKRFRLTGTGKVKRHHAFHSHILTKKTKKQKRNLVHDDIVVTENMKQVR 59


>gi|256827014|ref|YP_003150973.1| 50S ribosomal protein L35P [Cryptobacterium curtum DSM 15641]
 gi|256583157|gb|ACU94291.1| LSU ribosomal protein L35P [Cryptobacterium curtum DSM 15641]
          Length = 65

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF +T +GK+    A K H M K+S K  RN R    LA AD K + R
Sbjct: 1  MPKMKTHSGTAKRFRVTGSGKIMHAKAFKSHIMTKKSQKRKRNFRHETELAHADQKMIGR 60

Query: 61 NY 62
          N 
Sbjct: 61 NL 62


>gi|115351414|ref|YP_773253.1| 50S ribosomal protein L35 [Burkholderia ambifaria AMMD]
 gi|115281402|gb|ABI86919.1| LSU ribosomal protein L35P [Burkholderia ambifaria AMMD]
          Length = 81

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 17 MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 75

Query: 61 NYLPN 65
            LP 
Sbjct: 76 AMLPF 80


>gi|116074341|ref|ZP_01471603.1| 50S ribosomal protein L35 [Synechococcus sp. RS9916]
 gi|116069646|gb|EAU75398.1| 50S ribosomal protein L35 [Synechococcus sp. RS9916]
          Length = 85

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D ++V  
Sbjct: 21 MPKLKTRKAAAKRFKATGTGKFMRRRAFRNHLLDHKSPKLKRHLGTKAVVDRTDEERVA- 79

Query: 61 NYLPN 65
            +P 
Sbjct: 80 LMMPY 84


>gi|238021046|ref|ZP_04601472.1| hypothetical protein GCWU000324_00943 [Kingella oralis ATCC
          51147]
 gi|237868026|gb|EEP69032.1| hypothetical protein GCWU000324_00943 [Kingella oralis ATCC
          51147]
          Length = 76

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A K H + K++ K  R  RGT ++   D   V +
Sbjct: 12 MPKMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMVNERDMASVAK 71

Query: 61 NYLPN 65
            LP 
Sbjct: 72 -MLPY 75


>gi|282901101|ref|ZP_06309033.1| Ribosomal protein L35 [Cylindrospermopsis raciborskii CS-505]
 gi|281194000|gb|EFA68965.1| Ribosomal protein L35 [Cylindrospermopsis raciborskii CS-505]
          Length = 78

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK+  + A K H +  +++   R+     V+   D   V R
Sbjct: 14 MPKLKTRKAAAKRFRVTGSGKIVRRKAFKNHLLEHKTSGKKRSLSKMAVVDERDEDNV-R 72

Query: 61 NYLPN 65
            LP 
Sbjct: 73 LMLPY 77


>gi|254511131|ref|ZP_05123198.1| ribosomal protein L35 [Rhodobacteraceae bacterium KLH11]
 gi|221534842|gb|EEE37830.1| ribosomal protein L35 [Rhodobacteraceae bacterium KLH11]
          Length = 63

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT SS+KKRF +TATGKV A  AGKRHGMIKR+ KFIR+ARG   L++ DA K+++ Y+
Sbjct: 1  MKTKSSAKKRFKVTATGKVLAGQAGKRHGMIKRTKKFIRDARGNTTLSAPDA-KIVKGYM 59

Query: 64 PN 65
          P 
Sbjct: 60 PY 61


>gi|189424930|ref|YP_001952107.1| ribosomal protein L35 [Geobacter lovleyi SZ]
 gi|226725016|sp|B3E1T7|RL35_GEOLS RecName: Full=50S ribosomal protein L35
 gi|189421189|gb|ACD95587.1| ribosomal protein L35 [Geobacter lovleyi SZ]
          Length = 65

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T TGKV+   A   H +  +++K  RN R +  +A+ D K +  
Sbjct: 1  MPKIKTNRGAAKRFKKTGTGKVKRAHAFTSHILTHKTSKRKRNLRQSNTVAAVDQKNIC- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 ALIPY 64


>gi|54023883|ref|YP_118125.1| 50S ribosomal protein L35 [Nocardia farcinica IFM 10152]
 gi|81680171|sp|Q5YYI0|RL35_NOCFA RecName: Full=50S ribosomal protein L35
 gi|54015391|dbj|BAD56761.1| putative ribosomal protein L35 [Nocardia farcinica IFM 10152]
          Length = 64

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S + KRF ++  GK+  Q A +RH +  + ++  R   GT V+A+AD ++V +
Sbjct: 1  MPKMKSHSGASKRFKVSGKGKLLRQQANRRHLLEHKPSRRTRRLDGTEVVAAADVRRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|284037108|ref|YP_003387038.1| ribosomal protein L35 [Spirosoma linguale DSM 74]
 gi|283816401|gb|ADB38239.1| ribosomal protein L35 [Spirosoma linguale DSM 74]
          Length = 64

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS++KKRF +T TGK++ + A   H + K++ K  RN     ++   D +++ 
Sbjct: 1  MPKVKTNSAAKKRFKLTGTGKIKRKHAFHSHILTKKTTKQKRNLVHAALVDGPDERRIK 59


>gi|288918243|ref|ZP_06412598.1| ribosomal protein L35 [Frankia sp. EUN1f]
 gi|288350413|gb|EFC84635.1| ribosomal protein L35 [Frankia sp. EUN1f]
          Length = 64

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ + KRF +T TGKV  + A + H    +S++  R     +VL++AD +++ R
Sbjct: 1  MPKMKTHTGAGKRFRVTGTGKVMRRRANRSHLFEHKSSRRTRRLYDEVVLSAADDRRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|281420275|ref|ZP_06251274.1| ribosomal protein L35 [Prevotella copri DSM 18205]
 gi|281405770|gb|EFB36450.1| ribosomal protein L35 [Prevotella copri DSM 18205]
          Length = 65

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF  T TGK++   A   H + K++ K  RN  G  ++  ++ K+V 
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRHHAFHSHILTKKTKKQKRNLLGETLVDRSNLKQVR 59


>gi|88607195|ref|YP_504694.1| 50S ribosomal protein L35 [Anaplasma phagocytophilum HZ]
 gi|148887061|sp|Q2GLQ7|RL35_ANAPZ RecName: Full=50S ribosomal protein L35
 gi|88598258|gb|ABD43728.1| ribosomal protein L35 [Anaplasma phagocytophilum HZ]
          Length = 66

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF ITA+GKV A  + KRHGM KRS + +R  RGT ++++AD  +++ 
Sbjct: 1  MPKLKTKSSAKKRFKITASGKVVAAQSTKRHGMTKRSKRSLRTRRGTALMSAADT-RIVA 59

Query: 61 NYLPNGI 67
           ++P G+
Sbjct: 60 PFMPYGL 66


>gi|119945877|ref|YP_943557.1| ribosomal protein L35 [Psychromonas ingrahamii 37]
 gi|119864481|gb|ABM03958.1| LSU ribosomal protein L35P [Psychromonas ingrahamii 37]
          Length = 94

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S K  R+ R   ++   D  ++ R
Sbjct: 30 MPKLKTNKGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRAQSMVNKVDVPQIRR 89

Query: 61 NYLPN 65
            LP 
Sbjct: 90 -MLPF 93


>gi|294084799|ref|YP_003551559.1| hypothetical protein SAR116_1232 [Candidatus Puniceispirillum
          marinum IMCC1322]
 gi|292664374|gb|ADE39475.1| hypothetical protein SAR116_1232 [Candidatus Puniceispirillum
          marinum IMCC1322]
          Length = 65

 Score = 70.9 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +TA+GKVR  AA   H + +RS K  R ARGTM+L+ ADA ++++
Sbjct: 1  MPKMKTKSGAKKRFRLTASGKVRGSAAFLSHNLRRRSQKMKRKARGTMILSDADA-RIVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 RFIPY 64


>gi|282859090|ref|ZP_06268221.1| ribosomal protein L35 [Prevotella bivia JCVIHMP010]
 gi|282588120|gb|EFB93294.1| ribosomal protein L35 [Prevotella bivia JCVIHMP010]
          Length = 65

 Score = 70.9 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF+ T +GK++ + A   H + K++ K  RN  GT ++   + K+V 
Sbjct: 1  MPKQKTNSGAKKRFTFTGSGKIKRRHAFHSHILTKKTKKQKRNLVGTTLVDQTNLKQVR 59


>gi|282881465|ref|ZP_06290139.1| ribosomal protein L35 [Prevotella timonensis CRIS 5C-B1]
 gi|281304691|gb|EFA96777.1| ribosomal protein L35 [Prevotella timonensis CRIS 5C-B1]
          Length = 65

 Score = 70.9 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRFS T TGK++   A   H + K++ K  RN  G  ++  ++ K+V 
Sbjct: 1  MPKQKTNSGAKKRFSFTGTGKIKRNHAYHSHILTKKTKKQKRNLVGYTLVDKSNLKQVR 59


>gi|302561589|ref|ZP_07313931.1| 50S ribosomal protein L35 [Streptomyces griseoflavus Tu4000]
 gi|302479207|gb|EFL42300.1| 50S ribosomal protein L35 [Streptomyces griseoflavus Tu4000]
          Length = 64

 Score = 70.9 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DA K+ +
Sbjct: 1  MPKNKSHSGASKRFKVTGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|21220096|ref|NP_625875.1| 50S ribosomal protein L35 [Streptomyces coelicolor A3(2)]
 gi|239932315|ref|ZP_04689268.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
 gi|256788791|ref|ZP_05527222.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|289772686|ref|ZP_06532064.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|291440679|ref|ZP_06580069.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
 gi|297198453|ref|ZP_06915850.1| ribosomal protein L35 [Streptomyces sviceus ATCC 29083]
 gi|7674316|sp|O88059|RL35_STRCO RecName: Full=50S ribosomal protein L35
 gi|3581854|emb|CAA20810.1| 50S ribosomal protein L35 [Streptomyces coelicolor A3(2)]
 gi|197716143|gb|EDY60177.1| ribosomal protein L35 [Streptomyces sviceus ATCC 29083]
 gi|289702885|gb|EFD70314.1| 50S ribosomal protein L35 [Streptomyces lividans TK24]
 gi|291343574|gb|EFE70530.1| 50S ribosomal protein L35 [Streptomyces ghanaensis ATCC 14672]
          Length = 64

 Score = 70.9 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   G   +A  DA K+ +
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAAKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|307325423|ref|ZP_07604625.1| ribosomal protein L35 [Streptomyces violaceusniger Tu 4113]
 gi|306888892|gb|EFN19876.1| ribosomal protein L35 [Streptomyces violaceusniger Tu 4113]
          Length = 64

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GKV  Q AG+RH +  + +   R   G + LA ADAKK+ +
Sbjct: 1  MPKNKTHSGASKRFKLTGSGKVVRQRAGRRHLLEHKPSTLTRRLAGKVELAPADAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|149919498|ref|ZP_01907978.1| 50S Ribosomal protein L35 [Plesiocystis pacifica SIR-1]
 gi|149819623|gb|EDM79050.1| 50S Ribosomal protein L35 [Plesiocystis pacifica SIR-1]
          Length = 67

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S SKKRF  TA+GKV+ + + K H + K+    IR  RG  V +  D K++ +
Sbjct: 1  MPKMKSHSGSKKRFRFTASGKVKRKHSHKNHILTKKGPTRIRRLRGMTVASEPDQKRI-K 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 EMLPYG 65


>gi|119962218|ref|YP_947379.1| 50S ribosomal protein L35 [Arthrobacter aurescens TC1]
 gi|166231152|sp|A1R567|RL35_ARTAT RecName: Full=50S ribosomal protein L35
 gi|119949077|gb|ABM07988.1| ribosomal protein L35 [Arthrobacter aurescens TC1]
          Length = 64

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T TGK++ Q A +RH +  +S++  R   G  ++   DAK + +
Sbjct: 1  MPKMKTHSGAKKRFKLTGTGKLKRQQANRRHYLEHKSSRLTRRLAGDKLVFKGDAKVIKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|87301607|ref|ZP_01084447.1| 50S ribosomal protein L35 [Synechococcus sp. WH 5701]
 gi|87283824|gb|EAQ75778.1| 50S ribosomal protein L35 [Synechococcus sp. WH 5701]
          Length = 66

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T TGK   + A   H +  +S K  R      V+   DA  V R
Sbjct: 1  MPKLKTRRAAAKRFKVTGTGKFMRRRAFHNHLLDHKSPKRKRYLGTMAVVDERDADNVSR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|56475896|ref|YP_157485.1| 50S ribosomal protein L35 [Aromatoleum aromaticum EbN1]
 gi|81677574|sp|Q5P7X7|RL35_AZOSE RecName: Full=50S ribosomal protein L35
 gi|56311939|emb|CAI06584.1| 50S ribosomal protein L35 [Aromatoleum aromaticum EbN1]
          Length = 65

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF + A+G ++   A KRH + K++ K  R  RG   + +AD +K+IR
Sbjct: 1  MPKMKTKSGAAKRFKVRASGGIKRSQAFKRHILTKKTTKSKRQLRGMTGVHAAD-EKLIR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|288924996|ref|ZP_06418932.1| ribosomal protein L35 [Prevotella buccae D17]
 gi|315608032|ref|ZP_07883025.1| 50S ribosomal protein L35 [Prevotella buccae ATCC 33574]
 gi|288338186|gb|EFC76536.1| ribosomal protein L35 [Prevotella buccae D17]
 gi|315250501|gb|EFU30497.1| 50S ribosomal protein L35 [Prevotella buccae ATCC 33574]
          Length = 65

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNSS+KKRFS T TGK++   A   H + K++ K  RN     ++   + K+V 
Sbjct: 1  MPKVKTNSSAKKRFSFTGTGKIKRHHAFHSHILTKKTKKQKRNLVHDTLVDRTNLKQVR 59


>gi|328947927|ref|YP_004365264.1| 50S ribosomal protein L35 [Treponema succinifaciens DSM 2489]
 gi|328448251|gb|AEB13967.1| 50S ribosomal protein L35 [Treponema succinifaciens DSM 2489]
          Length = 66

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 39/66 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRFS+T TGKV+ +    RH + KRS K   + R   +L+   A ++ +
Sbjct: 1  MPKMKTKKSASKRFSLTGTGKVKYKKMNLRHILTKRSPKRKMHLRHAGILSEDSAARIRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QQLPYG 66


>gi|325103182|ref|YP_004272836.1| LSU ribosomal protein L35P [Pedobacter saltans DSM 12145]
 gi|324972030|gb|ADY51014.1| LSU ribosomal protein L35P [Pedobacter saltans DSM 12145]
          Length = 66

 Score = 70.5 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTNSS+KKRFS+T TGKV+ ++A K H + K++ K  RN   T  +  +D   V 
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKVKRKSAYKSHILTKKTTKQKRNLTHTAYVHESDMGNVK 59


>gi|320531669|ref|ZP_08032609.1| ribosomal protein L35 [Actinomyces sp. oral taxon 171 str. F0337]
 gi|325067168|ref|ZP_08125841.1| ribosomal protein L35 [Actinomyces oris K20]
 gi|326771655|ref|ZP_08230940.1| ribosomal protein L35 [Actinomyces viscosus C505]
 gi|320136089|gb|EFW28097.1| ribosomal protein L35 [Actinomyces sp. oral taxon 171 str. F0337]
 gi|326637788|gb|EGE38689.1| ribosomal protein L35 [Actinomyces viscosus C505]
          Length = 64

 Score = 70.5 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S++  R       +A AD ++V +
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQANKRHLLEVKSSRRKRKLSQDQPVAPADVRQVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|288928015|ref|ZP_06421862.1| ribosomal protein L35 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330849|gb|EFC69433.1| ribosomal protein L35 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 65

 Score = 70.5 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF  T TGKV+ + A   H + K++ K  RN   + ++  AD K+V 
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKVKRKHAYHSHILTKKTKKQKRNLVHSTLVDRADMKQVR 59


>gi|315604406|ref|ZP_07879472.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
          F0310]
 gi|320093954|ref|ZP_08025783.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
          F0338]
 gi|315314112|gb|EFU62163.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
          F0310]
 gi|319979112|gb|EFW10626.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
          F0338]
          Length = 64

 Score = 70.5 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF  T +GK+  + AG RH +  +S++  R      VL +AD K+V R
Sbjct: 1  MPKNKTHSGAKKRFRTTGSGKIMREQAGARHLLEHKSSRKTRRLATDQVLETADVKRVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|332295139|ref|YP_004437062.1| 50S ribosomal protein L35 [Thermodesulfobium narugense DSM 14796]
 gi|332178242|gb|AEE13931.1| 50S ribosomal protein L35 [Thermodesulfobium narugense DSM 14796]
          Length = 68

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T +GK+  +   + H +  +S K  R    T+V++S+D  +++ 
Sbjct: 1  MPKMKTCRAAAKRFRVTGSGKIIRRQQNRSHLLFHKSPKRKRRLAKTLVVSSSDLPRLMS 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 Q-LPY 64


>gi|145629398|ref|ZP_01785196.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.1-21]
 gi|145638898|ref|ZP_01794506.1| 50S ribosomal protein L35 [Haemophilus influenzae PittII]
 gi|148826978|ref|YP_001291731.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG]
 gi|260581334|ref|ZP_05849150.1| ribosomal protein L35 [Haemophilus influenzae RdAW]
 gi|319776261|ref|YP_004138749.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3047]
 gi|319897109|ref|YP_004135304.1| 50S ribosomal subunit protein l35 [Haemophilus influenzae F3031]
 gi|329123401|ref|ZP_08251965.1| 50S ribosomal protein L35 [Haemophilus aegyptius ATCC 11116]
 gi|1574779|gb|AAC22964.1| ribosomal protein L35 (rpL35) [Haemophilus influenzae Rd KW20]
 gi|68058187|gb|AAX88440.1| 50S ribosomal protein L35 [Haemophilus influenzae 86-028NP]
 gi|144978241|gb|EDJ88005.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.1-21]
 gi|145271870|gb|EDK11779.1| 50S ribosomal protein L35 [Haemophilus influenzae PittII]
 gi|148718220|gb|ABQ99347.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG]
 gi|260092001|gb|EEW75948.1| ribosomal protein L35 [Haemophilus influenzae RdAW]
 gi|317432613|emb|CBY80974.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3031]
 gi|317450852|emb|CBY87076.1| 50S ribosomal subunit protein L35 [Haemophilus influenzae F3047]
 gi|327470983|gb|EGF16438.1| 50S ribosomal protein L35 [Haemophilus aegyptius ATCC 11116]
          Length = 89

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+ 
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVA 84

Query: 61 NYLPN 65
            LP 
Sbjct: 85 C-LPY 88


>gi|291166784|gb|EFE28830.1| 50S ribosomal protein L35 [Filifactor alocis ATCC 35896]
          Length = 65

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  ++KRF +T +GK++   A K H + K+S K  RN R   ++   D  ++ R
Sbjct: 1  MPKMKTHRGAEKRFKMTGSGKLKRGKAYKSHILTKKSAKRKRNLRQAGIVTKGDQDRISR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|145630794|ref|ZP_01786572.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|145634937|ref|ZP_01790644.1| 50S ribosomal protein L35 [Haemophilus influenzae PittAA]
 gi|145636197|ref|ZP_01791867.1| 50S ribosomal protein L35 [Haemophilus influenzae PittHH]
 gi|145641653|ref|ZP_01797230.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|148826024|ref|YP_001290777.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE]
 gi|229845142|ref|ZP_04465277.1| 50S ribosomal protein L35 [Haemophilus influenzae 6P18H1]
 gi|229847478|ref|ZP_04467575.1| 50S ribosomal protein L35 [Haemophilus influenzae 7P49H1]
 gi|260582456|ref|ZP_05850247.1| ribosomal protein L35 [Haemophilus influenzae NT127]
 gi|270675224|ref|ZP_06222664.1| ribosomal protein L35 [Haemophilus influenzae HK1212]
 gi|144983676|gb|EDJ91136.1| 50S ribosomal protein L35 [Haemophilus influenzae R3021]
 gi|145267803|gb|EDK07800.1| 50S ribosomal protein L35 [Haemophilus influenzae PittAA]
 gi|145270719|gb|EDK10652.1| 50S ribosomal protein L35 [Haemophilus influenzae PittHH]
 gi|145273700|gb|EDK13569.1| 50S ribosomal protein L35 [Haemophilus influenzae 22.4-21]
 gi|148716184|gb|ABQ98394.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE]
 gi|229809619|gb|EEP45346.1| 50S ribosomal protein L35 [Haemophilus influenzae 7P49H1]
 gi|229811978|gb|EEP47672.1| 50S ribosomal protein L35 [Haemophilus influenzae 6P18H1]
 gi|260094436|gb|EEW78333.1| ribosomal protein L35 [Haemophilus influenzae NT127]
 gi|270316471|gb|EFA28340.1| ribosomal protein L35 [Haemophilus influenzae HK1212]
 gi|301170067|emb|CBW29671.1| 50S ribosomal protein L35 [Haemophilus influenzae 10810]
          Length = 89

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+ 
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVA 84

Query: 61 NYLPN 65
            LP 
Sbjct: 85 C-LPY 88


>gi|329954518|ref|ZP_08295609.1| ribosomal protein L35 [Bacteroides clarus YIT 12056]
 gi|328527486|gb|EGF54483.1| ribosomal protein L35 [Bacteroides clarus YIT 12056]
          Length = 65

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 38/63 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + +++  D  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSPTDVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|297195410|ref|ZP_06912808.1| 50S ribosomal protein L35 [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197719220|gb|EDY63128.1| 50S ribosomal protein L35 [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 64

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  + AGKRH +  + +K  R   G   +A  D+K + +
Sbjct: 1  MPKNKTHSGAKKRFKITGSGKVLRERAGKRHLLEHKPSKLTRRLTGNAEMAPGDSKTIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|329961277|ref|ZP_08299443.1| ribosomal protein L35 [Bacteroides fluxus YIT 12057]
 gi|328531942|gb|EGF58759.1| ribosomal protein L35 [Bacteroides fluxus YIT 12057]
          Length = 65

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 39/63 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T TGK++ + A   H + K++ K  RN   + +++S D  +V  
Sbjct: 1  MPKMKTNSGAKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSSTDVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|134299471|ref|YP_001112967.1| 50S ribosomal protein L35 [Desulfotomaculum reducens MI-1]
 gi|172044280|sp|A4J4Y9|RL35_DESRM RecName: Full=50S ribosomal protein L35
 gi|134052171|gb|ABO50142.1| LSU ribosomal protein L35P [Desulfotomaculum reducens MI-1]
          Length = 64

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TATGK+R   A   H + K++ K  RN R + ++  +DA ++ R
Sbjct: 1  MPKIKTHRGAAKRFKKTATGKIRGWHAFHSHILGKKTAKRKRNLRKSTIIHESDAVRISR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|239978528|ref|ZP_04701052.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|291450424|ref|ZP_06589814.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|329939050|ref|ZP_08288424.1| 50S ribosomal protein L35 [Streptomyces griseoaurantiacus M045]
 gi|291353373|gb|EFE80275.1| 50S ribosomal protein L35 [Streptomyces albus J1074]
 gi|329301935|gb|EGG45828.1| 50S ribosomal protein L35 [Streptomyces griseoaurantiacus M045]
          Length = 64

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF IT +GKV  + AGKRH +  +S++  R   G   +A  DAKK+ +
Sbjct: 1  MPKNKSHSGASKRFKITGSGKVLRERAGKRHLLEHKSSRLTRRLTGNAEMAPGDAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|77164651|ref|YP_343176.1| 50S ribosomal protein L35 [Nitrosococcus oceani ATCC 19707]
 gi|254433249|ref|ZP_05046757.1| ribosomal protein L35 [Nitrosococcus oceani AFC27]
 gi|148887086|sp|Q3JC00|RL35_NITOC RecName: Full=50S ribosomal protein L35
 gi|76882965|gb|ABA57646.1| LSU ribosomal protein L35P [Nitrosococcus oceani ATCC 19707]
 gi|207089582|gb|EDZ66853.1| ribosomal protein L35 [Nitrosococcus oceani AFC27]
          Length = 65

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK +   +   H + K+S+K  RN R   V+++AD  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTASGKFKHAQSHHNHILTKKSSKRKRNLRPLAVVSAADGPRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|29833280|ref|NP_827914.1| 50S ribosomal protein L35 [Streptomyces avermitilis MA-4680]
 gi|294628444|ref|ZP_06707004.1| 50S ribosomal protein L35 [Streptomyces sp. e14]
 gi|295839838|ref|ZP_06826771.1| ribosomal protein L35 [Streptomyces sp. SPB74]
 gi|302518073|ref|ZP_07270415.1| ribosomal protein L35 [Streptomyces sp. SPB78]
 gi|318061736|ref|ZP_07980457.1| 50S ribosomal protein L35 [Streptomyces sp. SA3_actG]
 gi|318080745|ref|ZP_07988077.1| 50S ribosomal protein L35 [Streptomyces sp. SA3_actF]
 gi|333028251|ref|ZP_08456315.1| putative 50S ribosomal protein L35 [Streptomyces sp. Tu6071]
 gi|54036300|sp|Q828D1|RL35_STRAW RecName: Full=50S ribosomal protein L35
 gi|29610402|dbj|BAC74449.1| putative ribosomal protein L35 [Streptomyces avermitilis MA-4680]
 gi|197698677|gb|EDY45610.1| ribosomal protein L35 [Streptomyces sp. SPB74]
 gi|292831777|gb|EFF90126.1| 50S ribosomal protein L35 [Streptomyces sp. e14]
 gi|302426968|gb|EFK98783.1| ribosomal protein L35 [Streptomyces sp. SPB78]
 gi|332748103|gb|EGJ78544.1| putative 50S ribosomal protein L35 [Streptomyces sp. Tu6071]
          Length = 64

 Score = 70.1 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DAKK+ +
Sbjct: 1  MPKNKSHSGASKRFKVTGSGKVLRERAGKRHLLEHKSSRLTRRLTGNAEMAPGDAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|255531806|ref|YP_003092178.1| 50S ribosomal protein L35 [Pedobacter heparinus DSM 2366]
 gi|255344790|gb|ACU04116.1| ribosomal protein L35 [Pedobacter heparinus DSM 2366]
          Length = 66

 Score = 70.1 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRFS+T TGK+  + A K H + K S K  RN   T +++ AD   V R
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKIARKNAYKSHILTKMSTKRKRNLGQTSMVSDADMGNVKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|296140119|ref|YP_003647362.1| ribosomal protein L35 [Tsukamurella paurometabola DSM 20162]
 gi|296028253|gb|ADG79023.1| ribosomal protein L35 [Tsukamurella paurometabola DSM 20162]
          Length = 64

 Score = 70.1 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF I+ +GKV  Q AG+RH +  +S++  R   G   +A AD ++V +
Sbjct: 1  MPKNKSHSGTAKRFKISGSGKVLRQKAGRRHLLEHKSSRVTRRLDGVAEVAPADVRRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|260911581|ref|ZP_05918166.1| 50S ribosomal protein L35 [Prevotella sp. oral taxon 472 str.
          F0295]
 gi|260634287|gb|EEX52392.1| 50S ribosomal protein L35 [Prevotella sp. oral taxon 472 str.
          F0295]
          Length = 65

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF  T TGK++ + A   H + K++ K  RN   + ++  +D K+V 
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRKHAYHSHILTKKTKKQKRNLVHSTLVDRSDMKQVR 59


>gi|111224588|ref|YP_715382.1| 50S ribosomal protein L35 [Frankia alni ACN14a]
 gi|123142776|sp|Q0RF99|RL35_FRAAA RecName: Full=50S ribosomal protein L35
 gi|111152120|emb|CAJ63848.1| 50S ribosomal subunit protein A [Frankia alni ACN14a]
          Length = 64

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF IT +GKV  Q A +RH +  +S++  R   G   L  ADA ++ R
Sbjct: 1  MPKQKSHSGASKRFRITGSGKVVRQKANRRHLLEHKSSRRTRRLAGVEPLTKADAGRIKR 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|255659700|ref|ZP_05405109.1| ribosomal protein L35 [Mitsuokella multacida DSM 20544]
 gi|260848274|gb|EEX68281.1| ribosomal protein L35 [Mitsuokella multacida DSM 20544]
          Length = 65

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T +G+ +   A K H + K+S K  RN R   ++A AD  +V +
Sbjct: 1  MPKIKTRRAAAKRFTVTGSGEFKRNKAFKSHILEKKSPKRKRNLRKATLVAGADFGRV-K 59

Query: 61 NYLPNG 66
          N LPNG
Sbjct: 60 NMLPNG 65


>gi|237653684|ref|YP_002889998.1| 50S ribosomal protein L35 [Thauera sp. MZ1T]
 gi|237624931|gb|ACR01621.1| ribosomal protein L35 [Thauera sp. MZ1T]
          Length = 65

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF + ++G ++   A KRH + K++ K  R+ RG   + +AD +K+IR
Sbjct: 1  MPKMKTKSGAKKRFKVRSSGGIKRSQAFKRHILTKKTTKVKRHLRGMTEVHAAD-EKLIR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|149276295|ref|ZP_01882439.1| 50S ribosomal protein L35 [Pedobacter sp. BAL39]
 gi|149232815|gb|EDM38190.1| 50S ribosomal protein L35 [Pedobacter sp. BAL39]
          Length = 66

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNSS+KKRFS+T TGK+  + A K H + K S K  RN   T +++ AD   V R
Sbjct: 1  MPKMKTNSSAKKRFSLTGTGKIARKNAYKSHILTKMSTKRKRNLSNTSMVSDADMGNVKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|296133379|ref|YP_003640626.1| ribosomal protein L35 [Thermincola sp. JR]
 gi|296031957|gb|ADG82725.1| ribosomal protein L35 [Thermincola potens JR]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GKV+   A K H + K+S K  RN R   ++++AD KKV +
Sbjct: 1  MPKMKTHRGAAKRFKVTGSGKVKKAKAYKSHILEKKSAKRKRNLRQPGLVSAADTKKV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LLLPY 64


>gi|209965597|ref|YP_002298512.1| ribosomal protein L35 [Rhodospirillum centenum SW]
 gi|226725056|sp|B6IPJ7|RL35_RHOCS RecName: Full=50S ribosomal protein L35
 gi|209959063|gb|ACI99699.1| ribosomal protein L35 [Rhodospirillum centenum SW]
          Length = 66

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +S SKKRF  TA+G V+AQAAGKRHGM KR  K  RNARGT V+  AD +K+  
Sbjct: 1  MPKLKNHSGSKKRFKFTASGLVKAQAAGKRHGMSKRPQKMKRNARGTFVMFKADGEKIAE 60

Query: 61 NYL 63
          N+L
Sbjct: 61 NFL 63


>gi|296270014|ref|YP_003652646.1| 50S ribosomal protein L35 [Thermobispora bispora DSM 43833]
 gi|296092801|gb|ADG88753.1| ribosomal protein L35 [Thermobispora bispora DSM 43833]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +GK+  + A ++H    + +   R  +G +V+++AD KKV +
Sbjct: 1  MPKMKTHSGAKKRFRLTGSGKIIRRRANRQHLFEHKPSTRTRRLQGVVVVSAADTKKVRK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|294811659|ref|ZP_06770302.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
 gi|326440157|ref|ZP_08214891.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
 gi|294324258|gb|EFG05901.1| 50S ribosomal protein L35 [Streptomyces clavuligerus ATCC 27064]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S SKKRF IT +GKV  + AGKRH +  + +   R   G   +A  DAKK+ +
Sbjct: 1  MPKNKTHSGSKKRFKITGSGKVLRERAGKRHLLEHKPSTLTRRLTGNAEMAPGDAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|332981195|ref|YP_004462636.1| 50S ribosomal protein L35P [Mahella australiensis 50-1 BON]
 gi|332698873|gb|AEE95814.1| LSU ribosomal protein L35P [Mahella australiensis 50-1 BON]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +TA+GK++   A + H + K++ K  RN R    ++ AD K + +
Sbjct: 1  MPKMKTHRGAAKRFRVTASGKIKRGKAYRSHILTKKTTKRKRNLRKIAYMSDADQKNI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 ELLPY 64


>gi|82701623|ref|YP_411189.1| ribosomal protein L35 [Nitrosospira multiformis ATCC 25196]
 gi|148887085|sp|Q2YBS4|RL35_NITMU RecName: Full=50S ribosomal protein L35
 gi|82409688|gb|ABB73797.1| LSU ribosomal protein L35P [Nitrosospira multiformis ATCC 25196]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF++ A G V+   A KRH + K++ K  R  RG++ +  +D   V R
Sbjct: 1  MPKMKTKSGAAKRFTVRAGGTVKRSQAFKRHILTKKTTKSKRQLRGSVNVHFSDVASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|304382819|ref|ZP_07365302.1| 50S ribosomal protein L35 [Prevotella marshii DSM 16973]
 gi|304336004|gb|EFM02251.1| 50S ribosomal protein L35 [Prevotella marshii DSM 16973]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF  T TGKV+   A   H + K++ K  RN     ++  A+ K+V 
Sbjct: 1  MPKQKTNSGAKKRFHFTGTGKVKRHRAFHSHILTKKTKKQKRNLTHQTIVDQANMKQVR 59


>gi|257790987|ref|YP_003181593.1| 50S ribosomal protein L35 [Eggerthella lenta DSM 2243]
 gi|317488303|ref|ZP_07946866.1| ribosomal protein L35 [Eggerthella sp. 1_3_56FAA]
 gi|325830779|ref|ZP_08164163.1| ribosomal protein L35 [Eggerthella sp. HGA1]
 gi|257474884|gb|ACV55204.1| ribosomal protein L35 [Eggerthella lenta DSM 2243]
 gi|316912588|gb|EFV34134.1| ribosomal protein L35 [Eggerthella sp. 1_3_56FAA]
 gi|325487186|gb|EGC89629.1| ribosomal protein L35 [Eggerthella sp. HGA1]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK+    A K H M K+S K  RN R    +A+AD K + R
Sbjct: 1  MPKMKTHRGTAKRFRVTGSGKIMRSKAFKSHIMTKKSQKRKRNFRHETEVATADQKVIAR 60

Query: 61 NY 62
          N 
Sbjct: 61 NL 62


>gi|167752692|ref|ZP_02424819.1| hypothetical protein ALIPUT_00949 [Alistipes putredinis DSM
          17216]
 gi|167659761|gb|EDS03891.1| hypothetical protein ALIPUT_00949 [Alistipes putredinis DSM
          17216]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 39/59 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN+++KKRFS T TGK++ + A   H + K+S K  RN   +  +++AD  K+ 
Sbjct: 1  MPKMKTNAAAKKRFSFTGTGKIKRKHAYHSHILTKKSTKQKRNLCYSGTVSAADEAKIK 59


>gi|323702721|ref|ZP_08114382.1| ribosomal protein L35 [Desulfotomaculum nigrificans DSM 574]
 gi|323532384|gb|EGB22262.1| ribosomal protein L35 [Desulfotomaculum nigrificans DSM 574]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TA+GK+R   A   H + K++ K  RN R ++++A ADA + +R
Sbjct: 1  MPKIKTHRGAAKRFKKTASGKIRGWHAFHSHILGKKTAKRKRNLRKSLIIAEADAGR-LR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 RLLPY 64


>gi|198275237|ref|ZP_03207768.1| hypothetical protein BACPLE_01396 [Bacteroides plebeius DSM
          17135]
 gi|198271820|gb|EDY96090.1| hypothetical protein BACPLE_01396 [Bacteroides plebeius DSM
          17135]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN     ++ +A+  +V  
Sbjct: 1  MPKIKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRNLCHMGLVDNANLAQVKE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|319902628|ref|YP_004162356.1| LSU ribosomal protein L35P [Bacteroides helcogenes P 36-108]
 gi|319417659|gb|ADV44770.1| LSU ribosomal protein L35P [Bacteroides helcogenes P 36-108]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 39/63 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++++ D  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSATDVNQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|312879876|ref|ZP_07739676.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
 gi|310783167|gb|EFQ23565.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
          Length = 65

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRFS+T +GKV  Q  G+RH +  ++ K  R  R   VL    A   ++
Sbjct: 1  MPKVKTHSGAKKRFSVTGSGKVVYQKNGRRHLLQCKNAKRRRRLRQQGVLTPVLAD-TLK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 QMMPY 64


>gi|319949971|ref|ZP_08023960.1| 50S ribosomal protein L35 [Dietzia cinnamea P4]
 gi|319436367|gb|EFV91498.1| 50S ribosomal protein L35 [Dietzia cinnamea P4]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+  Q A +RH M K+  K  R   G   +A AD  ++ R
Sbjct: 1  MPKMKTHKGTAKRFRKTGTGKLVRQQANRRHIMEKKPTKRTRRLDGRTDVAPADVPRIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|120404301|ref|YP_954130.1| 50S ribosomal protein L35 [Mycobacterium vanbaalenii PYR-1]
 gi|166231204|sp|A1TAC4|RL35_MYCVP RecName: Full=50S ribosomal protein L35
 gi|119957119|gb|ABM14124.1| LSU ribosomal protein L35P [Mycobacterium vanbaalenii PYR-1]
          Length = 64

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T +GKV  Q A +RH +  +  K  R   G  V+A+ D K+V +
Sbjct: 1  MPKAKTHSGASKRFRTTGSGKVVRQKANRRHLLEHKPTKRTRRLDGRTVVAANDVKRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|221484581|gb|EEE22875.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 483

 Score = 69.3 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKK 458


>gi|319779412|ref|YP_004130325.1| LSU ribosomal protein L35p [Taylorella equigenitalis MCE9]
 gi|317109436|gb|ADU92182.1| LSU ribosomal protein L35p [Taylorella equigenitalis MCE9]
          Length = 81

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 17 MPKMKTKKSASKRFIVRGSGSIKRGQAFKRHILTKKTTKNKRHLRGATQVHESDVASV-R 75

Query: 61 NYLPN 65
            +P 
Sbjct: 76 AMMPF 80


>gi|281423152|ref|ZP_06254065.1| ribosomal protein L35 [Prevotella oris F0302]
 gi|299140594|ref|ZP_07033732.1| ribosomal protein L35 [Prevotella oris C735]
 gi|281402488|gb|EFB33319.1| ribosomal protein L35 [Prevotella oris F0302]
 gi|298577560|gb|EFI49428.1| ribosomal protein L35 [Prevotella oris C735]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRFS T TGK++   A   H + K++ K  RN     ++  ++ K+V 
Sbjct: 1  MPKVKTNSGAKKRFSFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTMVDHSNMKQVR 59


>gi|150007317|ref|YP_001302060.1| 50S ribosomal protein L35 [Parabacteroides distasonis ATCC 8503]
 gi|255014058|ref|ZP_05286184.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_7]
 gi|256839606|ref|ZP_05545115.1| ribosomal protein L35 [Parabacteroides sp. D13]
 gi|262382110|ref|ZP_06075248.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_33B]
 gi|298375303|ref|ZP_06985260.1| ribosomal protein L35 [Bacteroides sp. 3_1_19]
 gi|301310683|ref|ZP_07216622.1| ribosomal protein L35 [Bacteroides sp. 20_3]
 gi|166199811|sp|A6L9S4|RL35_PARD8 RecName: Full=50S ribosomal protein L35
 gi|149935741|gb|ABR42438.1| ribosomal protein L35 [Parabacteroides distasonis ATCC 8503]
 gi|256738536|gb|EEU51861.1| ribosomal protein L35 [Parabacteroides sp. D13]
 gi|262297287|gb|EEY85217.1| 50S ribosomal protein L35 [Bacteroides sp. 2_1_33B]
 gi|298267803|gb|EFI09459.1| ribosomal protein L35 [Bacteroides sp. 3_1_19]
 gi|300832257|gb|EFK62888.1| ribosomal protein L35 [Bacteroides sp. 20_3]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T +GK++ + A K H + K++ K  RN   T ++AS D   V +
Sbjct: 1  MPKMKTNSGAKKRFALTGSGKIKRKHAFKSHILTKKTKKQKRNLTHTGLVASVDVSNVKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|50955433|ref|YP_062721.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str.
          CTCB07]
 gi|81692587|sp|Q6ADC8|RL35_LEIXX RecName: Full=50S ribosomal protein L35
 gi|50951915|gb|AAT89616.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str.
          CTCB07]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  Q AG RH +  + +   R      V+   DAK V R
Sbjct: 1  MPKQKTHSGAKKRFKITGSGKVMKQQAGMRHNLEVKGSDRKRRLNADQVVPEVDAKFVRR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|237839807|ref|XP_002369201.1| ribosomal protein L35 domain-containing protein [Toxoplasma gondii
           ME49]
 gi|211966865|gb|EEB02061.1| ribosomal protein L35 domain-containing protein [Toxoplasma gondii
           ME49]
          Length = 483

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKK 458


>gi|254463310|ref|ZP_05076726.1| ribosomal protein L35 [Rhodobacterales bacterium HTCC2083]
 gi|206679899|gb|EDZ44386.1| ribosomal protein L35 [Rhodobacteraceae bacterium HTCC2083]
          Length = 63

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT SS KKRF  TA+G+V A  AGK+HGMIKR+NKF+RNARGT  L++ D +K+I++ +
Sbjct: 1  MKTKSSCKKRFKTTASGRVVAAQAGKQHGMIKRTNKFLRNARGTTTLSAPD-EKIIKSMM 59

Query: 64 PN 65
          P 
Sbjct: 60 PY 61


>gi|307564409|ref|ZP_07626950.1| 50S ribosomal protein L35 [Prevotella amnii CRIS 21A-A]
 gi|307346769|gb|EFN92065.1| 50S ribosomal protein L35 [Prevotella amnii CRIS 21A-A]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF++T +GK++ + A   H + K++ K  RN  GT ++   + K+V 
Sbjct: 1  MPKQKTNSGAKKRFTLTGSGKIKRRHAFHSHILTKKTKKQKRNLLGTTIVDKTNLKQVR 59


>gi|167629867|ref|YP_001680366.1| 50S ribosomal protein l35 [Heliobacterium modesticaldum Ice1]
 gi|226725017|sp|B0TEV3|RL35_HELMI RecName: Full=50S ribosomal protein L35
 gi|167592607|gb|ABZ84355.1| 50S ribosomal protein l35 [Heliobacterium modesticaldum Ice1]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA+GK +A+ A  RH + K+S K  R  RGT V+A  D  K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTASGKFKAKNAFTRHILEKKSAKRKRQLRGTAVVAKEDTPK-LK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 ELLPY 64


>gi|297155953|gb|ADI05665.1| 50S ribosomal protein L35 [Streptomyces bingchenggensis BCW-1]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GKV  Q AG+RH +  + +   R   G   +A ADAKK+ +
Sbjct: 1  MPKNKTHSGASKRFKLTGSGKVMRQRAGRRHLLEHKPSTLTRRLAGKTEMAPADAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|15608780|ref|NP_216158.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Rv]
 gi|15841098|ref|NP_336135.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis CDC1551]
 gi|31792829|ref|NP_855322.1| 50S ribosomal protein L35 [Mycobacterium bovis AF2122/97]
 gi|121637550|ref|YP_977773.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Pasteur
          1173P2]
 gi|148661438|ref|YP_001282961.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|148822850|ref|YP_001287604.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis F11]
 gi|167968404|ref|ZP_02550681.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|215404056|ref|ZP_03416237.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 02_1987]
 gi|215411288|ref|ZP_03420096.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|215426961|ref|ZP_03424880.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T92]
 gi|215430534|ref|ZP_03428453.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|215445823|ref|ZP_03432575.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|218753348|ref|ZP_03532144.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis GM 1503]
 gi|219557561|ref|ZP_03536637.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T17]
 gi|224990025|ref|YP_002644712.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253799318|ref|YP_003032319.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          1435]
 gi|254231843|ref|ZP_04925170.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis C]
 gi|254364491|ref|ZP_04980537.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis str.
          Haarlem]
 gi|254550648|ref|ZP_05141095.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis '98-R604
          INH-RIF-EM']
 gi|260186590|ref|ZP_05764064.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis CPHL_A]
 gi|260200705|ref|ZP_05768196.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|260204911|ref|ZP_05772402.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis K85]
 gi|289443096|ref|ZP_06432840.1| LSU ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|289447252|ref|ZP_06436996.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CPHL_A]
 gi|289554583|ref|ZP_06443793.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          605]
 gi|289569689|ref|ZP_06449916.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T17]
 gi|289574311|ref|ZP_06454538.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis K85]
 gi|289745920|ref|ZP_06505298.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          02_1987]
 gi|289750190|ref|ZP_06509568.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T92]
 gi|289753730|ref|ZP_06513108.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|289757746|ref|ZP_06517124.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|289761793|ref|ZP_06521171.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis GM
          1503]
 gi|294996592|ref|ZP_06802283.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis 210]
 gi|297634195|ref|ZP_06951975.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN 4207]
 gi|297731182|ref|ZP_06960300.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN R506]
 gi|298525140|ref|ZP_07012549.1| ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|306775829|ref|ZP_07414166.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu001]
 gi|306779642|ref|ZP_07417979.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu002]
 gi|306784373|ref|ZP_07422695.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu003]
 gi|306788742|ref|ZP_07427064.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu004]
 gi|306793078|ref|ZP_07431380.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu005]
 gi|306797459|ref|ZP_07435761.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu006]
 gi|306803338|ref|ZP_07440006.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu008]
 gi|306807920|ref|ZP_07444588.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu007]
 gi|306967737|ref|ZP_07480398.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu009]
 gi|306971935|ref|ZP_07484596.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu010]
 gi|307079651|ref|ZP_07488821.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu011]
 gi|307084223|ref|ZP_07493336.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu012]
 gi|313658514|ref|ZP_07815394.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis KZN V2475]
 gi|54039204|sp|P66272|RL35_MYCBO RecName: Full=50S ribosomal protein L35
 gi|54041901|sp|P66271|RL35_MYCTU RecName: Full=50S ribosomal protein L35
 gi|166231198|sp|A1KJ59|RL35_MYCBP RecName: Full=50S ribosomal protein L35
 gi|166231202|sp|A5U2Z9|RL35_MYCTA RecName: Full=50S ribosomal protein L35
 gi|254802461|sp|C1ANR5|RL35_MYCBT RecName: Full=50S ribosomal protein L35
 gi|1838993|emb|CAB06636.1| Probable 50S ribosomal protein L35 RpmI [Mycobacterium
          tuberculosis H37Rv]
 gi|13881313|gb|AAK45949.1| ribosomal protein L35 [Mycobacterium tuberculosis CDC1551]
 gi|31618419|emb|CAD96337.1| 50S ribosomal protein L35 rpmI [Mycobacterium bovis AF2122/97]
 gi|121493197|emb|CAL71668.1| 50S ribosomal protein L35 rpmI [Mycobacterium bovis BCG str.
          Pasteur 1173P2]
 gi|124600902|gb|EAY59912.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis C]
 gi|134150005|gb|EBA42050.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis str.
          Haarlem]
 gi|148505590|gb|ABQ73399.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis H37Ra]
 gi|148721377|gb|ABR06002.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis F11]
 gi|224773138|dbj|BAH25944.1| 50S ribosomal protein L35 [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253320821|gb|ACT25424.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          1435]
 gi|289416015|gb|EFD13255.1| LSU ribosomal protein L35 [Mycobacterium tuberculosis T46]
 gi|289420210|gb|EFD17411.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CPHL_A]
 gi|289439215|gb|EFD21708.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          605]
 gi|289538742|gb|EFD43320.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis K85]
 gi|289543443|gb|EFD47091.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T17]
 gi|289686448|gb|EFD53936.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          02_1987]
 gi|289690777|gb|EFD58206.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis T92]
 gi|289694317|gb|EFD61746.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis EAS054]
 gi|289709299|gb|EFD73315.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis GM
          1503]
 gi|289713310|gb|EFD77322.1| 50S ribosomal protein L35 [Mycobacterium tuberculosis T85]
 gi|298494934|gb|EFI30228.1| ribosomal protein L35 [Mycobacterium tuberculosis 94_M4241A]
 gi|308215744|gb|EFO75143.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu001]
 gi|308327411|gb|EFP16262.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu002]
 gi|308330921|gb|EFP19772.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu003]
 gi|308334691|gb|EFP23542.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu004]
 gi|308338533|gb|EFP27384.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu005]
 gi|308342203|gb|EFP31054.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu006]
 gi|308345729|gb|EFP34580.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu007]
 gi|308350029|gb|EFP38880.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu008]
 gi|308354666|gb|EFP43517.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu009]
 gi|308358622|gb|EFP47473.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu010]
 gi|308362548|gb|EFP51399.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu011]
 gi|308366168|gb|EFP55019.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          SUMu012]
 gi|323719903|gb|EGB29016.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis
          CDC1551A]
 gi|326903257|gb|EGE50190.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis W-148]
 gi|328459069|gb|AEB04492.1| 50S ribosomal protein L35 rpmI [Mycobacterium tuberculosis KZN
          4207]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH +  + +   R   G  V+A+ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLDGRTVVAANDTKRV 58


>gi|269218566|ref|ZP_06162420.1| ribosomal protein L35 [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211677|gb|EEZ78017.1| ribosomal protein L35 [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + A KRH +  +S++  R       + +A+ K V R
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQANKRHLLEHKSSRRTRRLAMDQPVDAANLKSVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|302541295|ref|ZP_07293637.1| ribosomal protein L35 [Streptomyces hygroscopicus ATCC 53653]
 gi|302458913|gb|EFL22006.1| ribosomal protein L35 [Streptomyces himastatinicus ATCC 53653]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S ++KRF +T +GKV  Q AG+RH +  + +   R   G + +A ADAKK+ +
Sbjct: 1  MPKNKTHSGARKRFKVTGSGKVMRQRAGRRHLLEHKPSTLTRRLEGKVEMAPADAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|254850512|ref|ZP_05239862.1| ribosomal protein L35 [Vibrio cholerae MO10]
 gi|258623266|ref|ZP_05718273.1| Ribosomal protein L35 [Vibrio mimicus VM573]
 gi|258625493|ref|ZP_05720385.1| Ribosomal protein L35 [Vibrio mimicus VM603]
 gi|254846217|gb|EET24631.1| ribosomal protein L35 [Vibrio cholerae MO10]
 gi|258582199|gb|EEW07056.1| Ribosomal protein L35 [Vibrio mimicus VM603]
 gi|258584452|gb|EEW09194.1| Ribosomal protein L35 [Vibrio mimicus VM573]
          Length = 88

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 25 MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVAR 83

Query: 61 NYLPN 65
            LP 
Sbjct: 84 -MLPY 87


>gi|303237305|ref|ZP_07323875.1| ribosomal protein L35 [Prevotella disiens FB035-09AN]
 gi|302482692|gb|EFL45717.1| ribosomal protein L35 [Prevotella disiens FB035-09AN]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRFS T TGKV+   A   H + K++ K  RN   T ++ S++ K+V 
Sbjct: 1  MPKQKTNSGAKKRFSFTGTGKVKRNRAYHSHILTKKTKKQKRNLVHTALVDSSNMKQVR 59


>gi|333029963|ref|ZP_08458024.1| 50S ribosomal protein L35 [Bacteroides coprosuis DSM 18011]
 gi|332740560|gb|EGJ71042.1| 50S ribosomal protein L35 [Bacteroides coprosuis DSM 18011]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T TGK++ + A   H + K+S K       T ++   D K+++ 
Sbjct: 1  MPKMKTNSGAKKRFTLTGTGKIKRKHAYHSHILTKKSKKRKERLVKTGLVHPNDEKQILE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|260592277|ref|ZP_05857735.1| ribosomal protein L35 [Prevotella veroralis F0319]
 gi|288802817|ref|ZP_06408254.1| ribosomal protein L35 [Prevotella melaninogenica D18]
 gi|260535911|gb|EEX18528.1| ribosomal protein L35 [Prevotella veroralis F0319]
 gi|288334634|gb|EFC73072.1| ribosomal protein L35 [Prevotella melaninogenica D18]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++   + K+V 
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGTNLKQVR 59


>gi|325298801|ref|YP_004258718.1| 50S ribosomal protein L35 [Bacteroides salanitronis DSM 18170]
 gi|324318354|gb|ADY36245.1| 50S ribosomal protein L35 [Bacteroides salanitronis DSM 18170]
          Length = 65

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN     ++  A+   V  
Sbjct: 1  MPKVKTNSGAKKRFALTGTGKIKRKHAYHSHILTKKTKKQKRNLCHAGLVDKANLAAVKE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|221504775|gb|EEE30440.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 483

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL    AKK
Sbjct: 404 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGVMAKK 458


>gi|254456490|ref|ZP_05069919.1| ribosomal protein L35 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083492|gb|EDZ60918.1| ribosomal protein L35 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 68

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF I+A GKV    AGKRHGMIKR+N  IR  RGT  ++  D K +++
Sbjct: 1  MPKLKTKSSAKKRFKISAKGKVMTAQAGKRHGMIKRTNSQIRKLRGTTTMSKQDGK-IVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|169629408|ref|YP_001703057.1| 50S ribosomal protein L35 [Mycobacterium abscessus ATCC 19977]
 gi|226725036|sp|B1MAY2|RL35_MYCA9 RecName: Full=50S ribosomal protein L35
 gi|169241375|emb|CAM62403.1| 50S ribosomal protein L35 [Mycobacterium abscessus]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T +GK+  Q A +RH +  +     R   G  V+A  DAK+V +
Sbjct: 1  MPKAKTHSGASKRFRTTGSGKIVRQKANRRHLLEHKPTSRTRRLDGRAVVAENDAKRVKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|118473237|ref|YP_888085.1| 50S ribosomal protein L35 [Mycobacterium smegmatis str. MC2 155]
 gi|166231199|sp|A0QYU7|RL35_MYCS2 RecName: Full=50S ribosomal protein L35
 gi|118174524|gb|ABK75420.1| ribosomal protein L35 [Mycobacterium smegmatis str. MC2 155]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  +  K  R   G   +++AD  ++ +
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|86741867|ref|YP_482267.1| 50S ribosomal protein L35 [Frankia sp. CcI3]
 gi|124078994|sp|Q2J854|RL35_FRASC RecName: Full=50S ribosomal protein L35
 gi|86568729|gb|ABD12538.1| LSU ribosomal protein L35P [Frankia sp. CcI3]
          Length = 64

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KRF +T +GKV  Q A +RH +  ++++  R   G + L  AD ++V R
Sbjct: 1  MPKQKSHSGASKRFRVTGSGKVLRQRANRRHYLEHKTSRLTRRLDGVVPLTKADNRRVKR 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|40062680|gb|AAR37593.1| ribosomal protein L35 [uncultured marine bacterium 314]
          Length = 68

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF +TA GK++   AGKRHGMIKR+N  IR  RGT +++  D+ K+++
Sbjct: 1  MPKLKTKSSAKKRFRLTAKGKIKMPQAGKRHGMIKRTNSQIRKQRGTTIMSKQDS-KIVK 59

Query: 61 NYLPNGI 67
          +Y+P  +
Sbjct: 60 SYMPYSL 66


>gi|332701963|ref|ZP_08422051.1| 50S ribosomal protein L35 [Desulfovibrio africanus str. Walvis
          Bay]
 gi|332552112|gb|EGJ49156.1| 50S ribosomal protein L35 [Desulfovibrio africanus str. Walvis
          Bay]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRFS T +GK++ +   KRH + K+S K  R  RG+ ++  A+  +V R
Sbjct: 1  MPKMKTNRSAAKRFSKTGSGKIKRRQQNKRHILTKKSPKRKRQLRGSALVDKANEGQV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 MLLPY 64


>gi|251795321|ref|YP_003010052.1| ribosomal protein L35 [Paenibacillus sp. JDR-2]
 gi|247542947|gb|ACS99965.1| ribosomal protein L35 [Paenibacillus sp. JDR-2]
          Length = 66

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A+ D +++ +
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNHLLSHKSGRQKRVLAGQPLMAAGDVRRIQQ 60

Query: 61 NYL 63
             
Sbjct: 61 GLA 63


>gi|15676620|ref|NP_273764.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
 gi|59800745|ref|YP_207457.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA 1090]
 gi|121634519|ref|YP_974764.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
 gi|218767844|ref|YP_002342356.1| 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
 gi|239998486|ref|ZP_04718410.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
 gi|240013611|ref|ZP_04720524.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI18]
 gi|240016050|ref|ZP_04722590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA6140]
 gi|240080192|ref|ZP_04724735.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
 gi|240112405|ref|ZP_04726895.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|240115145|ref|ZP_04729207.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|240117429|ref|ZP_04731491.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|240120681|ref|ZP_04733643.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID24-1]
 gi|240122985|ref|ZP_04735941.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|240125237|ref|ZP_04738123.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|240127691|ref|ZP_04740352.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493205|ref|ZP_05106376.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
 gi|254804603|ref|YP_003082824.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
 gi|260441037|ref|ZP_05794853.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
 gi|268598468|ref|ZP_06132635.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|268600821|ref|ZP_06134988.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|268603126|ref|ZP_06137293.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|268681607|ref|ZP_06148469.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|268683835|ref|ZP_06150697.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|268686076|ref|ZP_06152938.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|329118118|ref|ZP_08246830.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
 gi|54039205|sp|P66274|RL35_NEIMB RecName: Full=50S ribosomal protein L35
 gi|54041902|sp|P66273|RL35_NEIMA RecName: Full=50S ribosomal protein L35
 gi|75507419|sp|Q5F9U2|RL35_NEIG1 RecName: Full=50S ribosomal protein L35
 gi|166231205|sp|A1KSY4|RL35_NEIMF RecName: Full=50S ribosomal protein L35
 gi|7225949|gb|AAF41135.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
 gi|59717640|gb|AAW89045.1| putative 50s ribosomal protein L35 [Neisseria gonorrhoeae FA
          1090]
 gi|120866225|emb|CAM09965.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
 gi|121051852|emb|CAM08158.1| putative 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
 gi|226512245|gb|EEH61590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
 gi|254668145|emb|CBA04774.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
 gi|254671882|emb|CBA04132.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha275]
 gi|261392909|emb|CAX50490.1| 50S ribosomal protein L35 [Neisseria meningitidis 8013]
 gi|268582599|gb|EEZ47275.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
 gi|268584952|gb|EEZ49628.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
 gi|268587257|gb|EEZ51933.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
 gi|268621891|gb|EEZ54291.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
 gi|268624119|gb|EEZ56519.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
 gi|268626360|gb|EEZ58760.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
 gi|308388911|gb|ADO31231.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha710]
 gi|319410091|emb|CBY90427.1| 50S ribosomal protein L35 [Neisseria meningitidis WUE 2594]
 gi|325206436|gb|ADZ01889.1| ribosomal protein L35 [Neisseria meningitidis M04-240196]
 gi|325207766|gb|ADZ03218.1| ribosomal protein L35 [Neisseria meningitidis NZ-05/33]
 gi|327465778|gb|EGF12051.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNDRDLASVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|325982723|ref|YP_004295125.1| 50S ribosomal protein L35 [Nitrosomonas sp. AL212]
 gi|325532242|gb|ADZ26963.1| 50S ribosomal protein L35 [Nitrosomonas sp. AL212]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF   A+G ++   A KRH + K++ K  R  RG   +   + +  IR
Sbjct: 1  MPKMKTKSGAAKRFKFRASGSIKRSQAFKRHILTKKTTKNKRQLRGIAEVHFTN-ENAIR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 TMMPY 64


>gi|302550251|ref|ZP_07302593.1| ribosomal protein L35 [Streptomyces viridochromogenes DSM 40736]
 gi|302467869|gb|EFL30962.1| ribosomal protein L35 [Streptomyces viridochromogenes DSM 40736]
          Length = 64

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S S KRF +T +GKV  + AGKRH +  +S++  R   G   +A  DAKK+ +
Sbjct: 1  MPKNKSHSGSSKRFKVTGSGKVLRERAGKRHLLEHKSSRVTRRLTGNAEMAPGDAKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|262276751|ref|ZP_06054544.1| ribosomal protein L35 [alpha proteobacterium HIMB114]
 gi|262223854|gb|EEY74313.1| ribosomal protein L35 [alpha proteobacterium HIMB114]
          Length = 68

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+KKRF ITA GKV++  AGKRHGMIKR+N  IR  RGT VL+  DA K+I+
Sbjct: 1  MAKLKTKSSAKKRFKITAKGKVKSAQAGKRHGMIKRTNSQIRKLRGTTVLSKQDA-KIIK 59

Query: 61 NYLPNGI 67
          +Y+PN +
Sbjct: 60 SYMPNSL 66


>gi|313763449|gb|EFS34813.1| ribosomal protein L35 [Propionibacterium acnes HL013PA1]
 gi|313773423|gb|EFS39389.1| ribosomal protein L35 [Propionibacterium acnes HL074PA1]
 gi|313793835|gb|EFS41864.1| ribosomal protein L35 [Propionibacterium acnes HL110PA1]
 gi|313801225|gb|EFS42483.1| ribosomal protein L35 [Propionibacterium acnes HL110PA2]
 gi|313808091|gb|EFS46568.1| ribosomal protein L35 [Propionibacterium acnes HL087PA2]
 gi|313811439|gb|EFS49153.1| ribosomal protein L35 [Propionibacterium acnes HL083PA1]
 gi|313813592|gb|EFS51306.1| ribosomal protein L35 [Propionibacterium acnes HL025PA1]
 gi|313816631|gb|EFS54345.1| ribosomal protein L35 [Propionibacterium acnes HL059PA1]
 gi|313819730|gb|EFS57444.1| ribosomal protein L35 [Propionibacterium acnes HL046PA2]
 gi|313822261|gb|EFS59975.1| ribosomal protein L35 [Propionibacterium acnes HL036PA1]
 gi|313823745|gb|EFS61459.1| ribosomal protein L35 [Propionibacterium acnes HL036PA2]
 gi|313826067|gb|EFS63781.1| ribosomal protein L35 [Propionibacterium acnes HL063PA1]
 gi|313829640|gb|EFS67354.1| ribosomal protein L35 [Propionibacterium acnes HL063PA2]
 gi|313831178|gb|EFS68892.1| ribosomal protein L35 [Propionibacterium acnes HL007PA1]
 gi|313834839|gb|EFS72553.1| ribosomal protein L35 [Propionibacterium acnes HL056PA1]
 gi|313836585|gb|EFS74299.1| ribosomal protein L35 [Propionibacterium acnes HL037PA2]
 gi|313840044|gb|EFS77758.1| ribosomal protein L35 [Propionibacterium acnes HL086PA1]
 gi|314914608|gb|EFS78439.1| ribosomal protein L35 [Propionibacterium acnes HL005PA4]
 gi|314919435|gb|EFS83266.1| ribosomal protein L35 [Propionibacterium acnes HL050PA1]
 gi|314920657|gb|EFS84488.1| ribosomal protein L35 [Propionibacterium acnes HL050PA3]
 gi|314923957|gb|EFS87788.1| ribosomal protein L35 [Propionibacterium acnes HL001PA1]
 gi|314924557|gb|EFS88388.1| ribosomal protein L35 [Propionibacterium acnes HL036PA3]
 gi|314928095|gb|EFS91926.1| ribosomal protein L35 [Propionibacterium acnes HL044PA1]
 gi|314930427|gb|EFS94258.1| ribosomal protein L35 [Propionibacterium acnes HL067PA1]
 gi|314954518|gb|EFS98924.1| ribosomal protein L35 [Propionibacterium acnes HL027PA1]
 gi|314957361|gb|EFT01464.1| ribosomal protein L35 [Propionibacterium acnes HL002PA1]
 gi|314962175|gb|EFT06276.1| ribosomal protein L35 [Propionibacterium acnes HL002PA2]
 gi|314963804|gb|EFT07904.1| ribosomal protein L35 [Propionibacterium acnes HL082PA1]
 gi|314966001|gb|EFT10100.1| ribosomal protein L35 [Propionibacterium acnes HL082PA2]
 gi|314968367|gb|EFT12466.1| ribosomal protein L35 [Propionibacterium acnes HL037PA1]
 gi|314972095|gb|EFT16192.1| ribosomal protein L35 [Propionibacterium acnes HL037PA3]
 gi|314974057|gb|EFT18153.1| ribosomal protein L35 [Propionibacterium acnes HL053PA1]
 gi|314976763|gb|EFT20858.1| ribosomal protein L35 [Propionibacterium acnes HL045PA1]
 gi|314978782|gb|EFT22876.1| ribosomal protein L35 [Propionibacterium acnes HL072PA2]
 gi|314981814|gb|EFT25907.1| ribosomal protein L35 [Propionibacterium acnes HL110PA3]
 gi|314984485|gb|EFT28577.1| ribosomal protein L35 [Propionibacterium acnes HL005PA1]
 gi|314986662|gb|EFT30754.1| ribosomal protein L35 [Propionibacterium acnes HL005PA2]
 gi|314990777|gb|EFT34868.1| ribosomal protein L35 [Propionibacterium acnes HL005PA3]
 gi|315079656|gb|EFT51646.1| ribosomal protein L35 [Propionibacterium acnes HL053PA2]
 gi|315081115|gb|EFT53091.1| ribosomal protein L35 [Propionibacterium acnes HL078PA1]
 gi|315083436|gb|EFT55412.1| ribosomal protein L35 [Propionibacterium acnes HL027PA2]
 gi|315087003|gb|EFT58979.1| ribosomal protein L35 [Propionibacterium acnes HL002PA3]
 gi|315089178|gb|EFT61154.1| ribosomal protein L35 [Propionibacterium acnes HL072PA1]
 gi|315090682|gb|EFT62658.1| ribosomal protein L35 [Propionibacterium acnes HL110PA4]
 gi|315094893|gb|EFT66869.1| ribosomal protein L35 [Propionibacterium acnes HL060PA1]
 gi|315095232|gb|EFT67208.1| ribosomal protein L35 [Propionibacterium acnes HL038PA1]
 gi|315099077|gb|EFT71053.1| ribosomal protein L35 [Propionibacterium acnes HL059PA2]
 gi|315100542|gb|EFT72518.1| ribosomal protein L35 [Propionibacterium acnes HL046PA1]
 gi|315104165|gb|EFT76141.1| ribosomal protein L35 [Propionibacterium acnes HL050PA2]
 gi|315106684|gb|EFT78660.1| ribosomal protein L35 [Propionibacterium acnes HL030PA1]
 gi|315108910|gb|EFT80886.1| ribosomal protein L35 [Propionibacterium acnes HL030PA2]
 gi|327327990|gb|EGE69759.1| ribosomal protein L35 [Propionibacterium acnes HL103PA1]
 gi|327329567|gb|EGE71326.1| ribosomal protein L35 [Propionibacterium acnes HL096PA3]
 gi|327329588|gb|EGE71346.1| ribosomal protein L35 [Propionibacterium acnes HL096PA2]
 gi|327333952|gb|EGE75668.1| ribosomal protein L35 [Propionibacterium acnes HL097PA1]
 gi|327444368|gb|EGE91022.1| ribosomal protein L35 [Propionibacterium acnes HL043PA2]
 gi|327444567|gb|EGE91221.1| ribosomal protein L35 [Propionibacterium acnes HL043PA1]
 gi|327446239|gb|EGE92893.1| ribosomal protein L35 [Propionibacterium acnes HL013PA2]
 gi|327452176|gb|EGE98830.1| ribosomal protein L35 [Propionibacterium acnes HL092PA1]
 gi|327452809|gb|EGE99463.1| ribosomal protein L35 [Propionibacterium acnes HL087PA3]
 gi|327457886|gb|EGF04541.1| ribosomal protein L35 [Propionibacterium acnes HL083PA2]
 gi|328752001|gb|EGF65617.1| ribosomal protein L35 [Propionibacterium acnes HL020PA1]
 gi|328755367|gb|EGF68983.1| ribosomal protein L35 [Propionibacterium acnes HL087PA1]
 gi|328757790|gb|EGF71406.1| ribosomal protein L35 [Propionibacterium acnes HL025PA2]
 gi|328760151|gb|EGF73728.1| ribosomal protein L35 [Propionibacterium acnes HL099PA1]
 gi|328907934|gb|EGG27694.1| 50S ribosomal protein L35 [Propionibacterium sp. P08]
          Length = 72

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF +T +GKV A+ AGKRH    +S++  R   G  VL+  +A KV +
Sbjct: 5  MPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAAKVKK 64

Query: 61 NYL 63
             
Sbjct: 65 LLA 67


>gi|322383963|ref|ZP_08057693.1| 50S ribosomal protein L35-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
 gi|321151440|gb|EFX44627.1| 50S ribosomal protein L35-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
          Length = 66

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A  D K++ +
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNHLLSHKSGRQKRVLEGQPIMAPGDVKRLKQ 60

Query: 61 NY 62
            
Sbjct: 61 GL 62


>gi|225024917|ref|ZP_03714109.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
          23834]
 gi|224942321|gb|EEG23530.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
          23834]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G ++   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGIKRAHAFKRHILTKKTTKNKRQLRGTAMVNERDVASVHK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|325269095|ref|ZP_08135716.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
          multiformis DSM 16608]
 gi|324988716|gb|EGC20678.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Prevotella
          multiformis DSM 16608]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF+ T TGK++ + A   H + K++ K  RN     ++  ++ K+V 
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRRHAFHSHILTKKTKKQKRNLVHQTLVDGSNLKQVR 59


>gi|329944514|ref|ZP_08292679.1| ribosomal protein L35 [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530279|gb|EGF57158.1| ribosomal protein L35 [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 64

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  +   KRH +  +S++  R       +A AD ++V +
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQTNKRHLLEVKSSRRKRKLSQDQPVAPADVRQVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|212691284|ref|ZP_03299412.1| hypothetical protein BACDOR_00775 [Bacteroides dorei DSM 17855]
 gi|237712287|ref|ZP_04542768.1| ribosomal protein L35 [Bacteroides sp. 9_1_42FAA]
 gi|237726426|ref|ZP_04556907.1| ribosomal protein L35 [Bacteroides sp. D4]
 gi|254881562|ref|ZP_05254272.1| ribosomal protein L35 [Bacteroides sp. 4_3_47FAA]
 gi|265751995|ref|ZP_06087788.1| 50S ribosomal protein L35 [Bacteroides sp. 3_1_33FAA]
 gi|319642946|ref|ZP_07997582.1| hypothetical protein HMPREF9011_03183 [Bacteroides sp. 3_1_40A]
 gi|212666516|gb|EEB27088.1| hypothetical protein BACDOR_00775 [Bacteroides dorei DSM 17855]
 gi|229434952|gb|EEO45029.1| ribosomal protein L35 [Bacteroides dorei 5_1_36/D4]
 gi|229453608|gb|EEO59329.1| ribosomal protein L35 [Bacteroides sp. 9_1_42FAA]
 gi|254834355|gb|EET14664.1| ribosomal protein L35 [Bacteroides sp. 4_3_47FAA]
 gi|263236787|gb|EEZ22257.1| 50S ribosomal protein L35 [Bacteroides sp. 3_1_33FAA]
 gi|317385494|gb|EFV66437.1| hypothetical protein HMPREF9011_03183 [Bacteroides sp. 3_1_40A]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS SKKRF +T TGK++ + A   H + K++ K  RN   + ++A+A+  +V  
Sbjct: 1  MPKIKTNSGSKKRFVLTGTGKIKRKHAFHSHILTKKTKKQKRNLVHSGLVANANLDQVKE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|83590592|ref|YP_430601.1| 50S ribosomal protein L35P [Moorella thermoacetica ATCC 39073]
 gi|148887082|sp|Q2RHN1|RL35_MOOTA RecName: Full=50S ribosomal protein L35
 gi|83573506|gb|ABC20058.1| LSU ribosomal protein L35P [Moorella thermoacetica ATCC 39073]
          Length = 66

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR  +TA+GKV+   A K H +  ++ K  R  R   ++ S D ++V R
Sbjct: 1  MPKMKTHRGAAKRLRVTASGKVKRFRAYKSHLLASKTPKQKRRLRHPALVDSTDRRRVAR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|255625911|gb|ACU13300.1| unknown [Glycine max]
          Length = 147

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K          ++ +D   VI   
Sbjct: 78  KMKTHKASAKRFRVTGRGKIVCRRAGKQHLLVKKNTKRKSRLSKMHAVSRSDYDNVIGA- 136

Query: 63  LPN 65
           LP 
Sbjct: 137 LPY 139


>gi|332969047|gb|EGK08087.1| 50S ribosomal protein L35 [Kingella kingae ATCC 23330]
          Length = 65

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVNERDLASVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|291514675|emb|CBK63885.1| LSU ribosomal protein L35P [Alistipes shahii WAL 8301]
 gi|313157125|gb|EFR56555.1| ribosomal protein L35 [Alistipes sp. HGB5]
          Length = 64

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 39/59 (66%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN+++KKRF+ T TGK++ + A   H + K++ K  RN   +  +++AD  K+ 
Sbjct: 1  MPKMKTNAAAKKRFTFTGTGKIKRKHAYHSHILTKKTTKQKRNLCYSGTVSAADEAKIK 59


>gi|160889629|ref|ZP_02070632.1| hypothetical protein BACUNI_02055 [Bacteroides uniformis ATCC
          8492]
 gi|270293971|ref|ZP_06200173.1| 50S ribosomal protein L35 [Bacteroides sp. D20]
 gi|317479176|ref|ZP_07938313.1| ribosomal protein L35 [Bacteroides sp. 4_1_36]
 gi|156860621|gb|EDO54052.1| hypothetical protein BACUNI_02055 [Bacteroides uniformis ATCC
          8492]
 gi|270275438|gb|EFA21298.1| 50S ribosomal protein L35 [Bacteroides sp. D20]
 gi|316904664|gb|EFV26481.1| ribosomal protein L35 [Bacteroides sp. 4_1_36]
          Length = 65

 Score = 68.5 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 39/63 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++++ D  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTLVSTTDVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|116779211|gb|ABK21182.1| unknown [Picea sitchensis]
 gi|148908537|gb|ABR17379.1| unknown [Picea sitchensis]
          Length = 153

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K          +  +D   VI   
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLVKKNTKRKNRLSKMTYVDKSDYANVIGA- 142

Query: 63  LPN 65
           LP 
Sbjct: 143 LPY 145


>gi|294787704|ref|ZP_06752948.1| ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
 gi|325266386|ref|ZP_08133064.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
 gi|294483997|gb|EFG31680.1| ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
 gi|324982179|gb|EGC17813.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RGT ++   D   V +
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMVHERDLASVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|73666768|ref|YP_302784.1| 50S ribosomal protein L35 [Ehrlichia canis str. Jake]
 gi|148887072|sp|Q3YSW9|RL35_EHRCJ RecName: Full=50S ribosomal protein L35
 gi|72393909|gb|AAZ68186.1| LSU ribosomal protein L35P [Ehrlichia canis str. Jake]
          Length = 66

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT ++  +D+ ++++
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNPSDS-RIVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 LFMPY 64


>gi|317507014|ref|ZP_07964781.1| ribosomal protein L35 [Segniliparus rugosus ATCC BAA-974]
 gi|316254698|gb|EFV14001.1| ribosomal protein L35 [Segniliparus rugosus ATCC BAA-974]
          Length = 64

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+S + KR  +T +GK+R Q  GKRH +  +     R   GT  +A  D K++ 
Sbjct: 1  MPKNKTHSGASKRIKVTGSGKLRRQKCGKRHNLEVKPTNLTRRLDGTAAVARPDVKRIK 59


>gi|71908288|ref|YP_285875.1| 50S ribosomal protein L35 [Dechloromonas aromatica RCB]
 gi|148840419|sp|Q47CM6|RL35_DECAR RecName: Full=50S ribosomal protein L35
 gi|71847909|gb|AAZ47405.1| LSU ribosomal protein L35P [Dechloromonas aromatica RCB]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRFSI A G ++   A KRH + K++ K  R+ RG   +   DA  V R
Sbjct: 1  MPKMKTKSSAKKRFSIRAGGSIKRGQAFKRHILTKKTTKVKRHLRGATAVHERDAASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|289643248|ref|ZP_06475374.1| ribosomal protein L35 [Frankia symbiont of Datisca glomerata]
 gi|289506953|gb|EFD27926.1| ribosomal protein L35 [Frankia symbiont of Datisca glomerata]
          Length = 64

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT++ + KRF IT +GKV  + A + H +  +S++  R     + L+ AD  ++ +
Sbjct: 1  MPKTKTHTGAAKRFRITGSGKVMRRRANRNHLLEHKSSRRTRRLDNEVRLSPADEGRIKK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|118595087|ref|ZP_01552434.1| 50S ribosomal protein L35 [Methylophilales bacterium HTCC2181]
 gi|118440865|gb|EAV47492.1| 50S ribosomal protein L35 [Methylophilales bacterium HTCC2181]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF    +G ++   +  RH + K++ K  RN RGT +++S+DAK+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGSGAIKRTHSHLRHILTKKTTKQKRNLRGTEIISSSDAKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|226330396|ref|ZP_03805914.1| hypothetical protein PROPEN_04314 [Proteus penneri ATCC 35198]
 gi|225201191|gb|EEG83545.1| hypothetical protein PROPEN_04314 [Proteus penneri ATCC 35198]
          Length = 83

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R   +++  D   V+ 
Sbjct: 19 MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVVA 78

Query: 61 NYLPN 65
            LP 
Sbjct: 79 C-LPY 82


>gi|94967745|ref|YP_589793.1| 50S ribosomal protein L35P [Candidatus Koribacter versatilis
          Ellin345]
 gi|94549795|gb|ABF39719.1| LSU ribosomal protein L35P [Candidatus Koribacter versatilis
          Ellin345]
          Length = 79

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KRF  TATGKV+   A KRH +  +S K  R+     +++ AD  K+ R
Sbjct: 16 MPKLKTHSGAAKRFKKTATGKVKRSKAFKRHILTSKSTKKKRHFDMEGLVSKADTPKIKR 75

Query: 61 NYLPN 65
            +P 
Sbjct: 76 -MIPY 79


>gi|172038064|ref|YP_001804565.1| 50S ribosomal protein L35 [Cyanothece sp. ATCC 51142]
 gi|171699518|gb|ACB52499.1| 50S ribosomal protein L35 [Cyanothece sp. ATCC 51142]
          Length = 82

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T +G K+  + A K H +  +S +   R    T +++  D   V
Sbjct: 16 MPKLKTRKAAAKRFRVTGSGKKIVRRKAFKNHLLNHKSAERKRRRLSNTALVSEQDEPNV 75

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 76 -RLMLPY 81


>gi|322419729|ref|YP_004198952.1| 50S ribosomal protein L35 [Geobacter sp. M18]
 gi|320126116|gb|ADW13676.1| ribosomal protein L35 [Geobacter sp. M18]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++A++D K +
Sbjct: 1  MPKMKTHRGAAKRFSKTGTGKIKMAHAFTSHILTSKTRKTKRNLRKGGIVAASDHKNI 58


>gi|152983158|ref|YP_001353179.1| 50S ribosomal subunit protein A [Janthinobacterium sp. Marseille]
 gi|151283235|gb|ABR91645.1| 50S ribosomal subunit protein A [Janthinobacterium sp. Marseille]
          Length = 76

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG + +   +   V R
Sbjct: 12 MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVGVHDTNMNSV-R 70

Query: 61 NYLPN 65
            +PN
Sbjct: 71 AMMPN 75


>gi|89893014|ref|YP_516501.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense Y51]
 gi|219666285|ref|YP_002456720.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense DCB-2]
 gi|148840417|sp|Q251I5|RL35_DESHY RecName: Full=50S ribosomal protein L35
 gi|254802448|sp|B8FZK1|RL35_DESHD RecName: Full=50S ribosomal protein L35
 gi|89332462|dbj|BAE82057.1| 50S ribosomal protein L35 [Desulfitobacterium hafniense Y51]
 gi|219536545|gb|ACL18284.1| ribosomal protein L35 [Desulfitobacterium hafniense DCB-2]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+    A   H + K+S K  RN R   V+   DAK++ R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIVRHHAFTSHILEKKSPKRKRNLRKGTVMHKTDAKRIAR 60


>gi|326800362|ref|YP_004318181.1| 50S ribosomal protein L35 [Sphingobacterium sp. 21]
 gi|326551126|gb|ADZ79511.1| 50S ribosomal protein L35 [Sphingobacterium sp. 21]
          Length = 66

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 40/62 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRFS+T TGK++ + A K H + K S K  RN   + +++ AD   V R
Sbjct: 1  MPKVKTNSSAKKRFSLTGTGKIKRKHAYKSHILTKMSTKRKRNLTRSGLVSDADLGNVKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|237747669|ref|ZP_04578149.1| 50S ribosomal subunit protein A [Oxalobacter formigenes OXCC13]
 gi|229379031|gb|EEO29122.1| 50S ribosomal subunit protein A [Oxalobacter formigenes OXCC13]
          Length = 73

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG   + ++D   V+R
Sbjct: 9  MPKMKTKSSAKKRFRVRPGGTVKCGQAFKRHILTKKTTKAKRQLRGATNVNASDVSSVLR 68

Query: 61 NY 62
            
Sbjct: 69 MM 70


>gi|37198873|dbj|BAC94707.1| ribosomal protein L35 [Vibrio vulnificus YJ016]
          Length = 88

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 25 MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSLLPRCEVAAVAR 83

Query: 61 NYLPN 65
            LP 
Sbjct: 84 -MLPY 87


>gi|312195568|ref|YP_004015629.1| ribosomal protein L35 [Frankia sp. EuI1c]
 gi|311226904|gb|ADP79759.1| ribosomal protein L35 [Frankia sp. EuI1c]
          Length = 64

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK +S + KRF +T +GK+  + A + H +  ++++  R     + LA AD +++ R
Sbjct: 1  MPKMKPHSGASKRFRVTGSGKIMRRRANRAHLLEHKTSRRTRRLNNEVALAPADNRRISR 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|257056554|ref|YP_003134386.1| 50S ribosomal protein L35 [Saccharomonospora viridis DSM 43017]
 gi|256586426|gb|ACU97559.1| LSU ribosomal protein L35P [Saccharomonospora viridis DSM 43017]
          Length = 64

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 40/62 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S   KR  +T +GK+R + AG+RH + K+S++  R   GT  +A+AD ++V R
Sbjct: 1  MPKNKSHSGMSKRVRVTGSGKLRREQAGRRHLLEKKSSRVTRRLEGTTEVAAADVRRVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|114332289|ref|YP_748511.1| 50S ribosomal protein L35 [Nitrosomonas eutropha C91]
 gi|122313050|sp|Q0ADN6|RL35_NITEC RecName: Full=50S ribosomal protein L35
 gi|114309303|gb|ABI60546.1| LSU ribosomal protein L35P [Nitrosomonas eutropha C91]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF I A G ++   A KRH + K++ K  R  RG  V+ ++D   V R
Sbjct: 1  MPKMKTKKSAAKRFRIRAGGSIKRSQAFKRHILTKKTTKNKRQLRGMTVVHASDVASV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|332667069|ref|YP_004449857.1| 50S ribosomal protein L35 [Haliscomenobacter hydrossis DSM 1100]
 gi|332335883|gb|AEE52984.1| 50S ribosomal protein L35 [Haliscomenobacter hydrossis DSM 1100]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS+KKRF +T +GKV+   A   H M  +S +     R + ++  AD K+V+R
Sbjct: 1  MPKMKTHSSAKKRFKVTGSGKVKRFQANTSHLMRNKSKRAKLAHRDSTLVCEADEKRVLR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|296164541|ref|ZP_06847112.1| 50S ribosomal protein L35 [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295900141|gb|EFG79576.1| 50S ribosomal protein L35 [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 64

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH +  +S+   R   G   +++ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSTRTRRLEGRTTVSANDTKRV 58


>gi|114776994|ref|ZP_01452014.1| 50S ribosomal protein L35 [Mariprofundus ferrooxydans PV-1]
 gi|114552515|gb|EAU54975.1| 50S ribosomal protein L35 [Mariprofundus ferrooxydans PV-1]
          Length = 66

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/60 (46%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRFS T +GK +   A   H + K+S K  RN RGT +++ +DAK + R
Sbjct: 1  MPKMKSNSGAAKRFSKTGSGKWKRNKAFGSHILTKKSPKRKRNMRGTELVSGSDAKALER 60


>gi|291279883|ref|YP_003496718.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
 gi|290754585|dbj|BAI80962.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
          Length = 65

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GKV+ + AG RH +  ++ K  R  R   +L  ADA+ V +
Sbjct: 1  MPKVKTHRGAAKRFKVTGSGKVKYKKAGLRHLLSSKAKKRKRALRHPGILEGADAQNVKK 60


>gi|224023753|ref|ZP_03642119.1| hypothetical protein BACCOPRO_00469 [Bacteroides coprophilus DSM
          18228]
 gi|224016975|gb|EEF74987.1| hypothetical protein BACCOPRO_00469 [Bacteroides coprophilus DSM
          18228]
          Length = 65

 Score = 68.2 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF++T TGK++ + A   H + K++ K  RN     ++ + +  +V  
Sbjct: 1  MPKIKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRNLVHAGLVHNVNLGQVRE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|119897372|ref|YP_932585.1| 50S ribosomal protein L35 [Azoarcus sp. BH72]
 gi|166231154|sp|A1K4E3|RL35_AZOSB RecName: Full=50S ribosomal protein L35
 gi|119669785|emb|CAL93698.1| 50S ribosomal protein L35 [Azoarcus sp. BH72]
          Length = 65

 Score = 68.2 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF + ++G ++   A KRH + K++ K  R  RG   + ++D +K+IR
Sbjct: 1  MPKMKTKSSAKKRFKVRSSGGIKRSQAFKRHILTKKTTKSKRQLRGMTEVHASD-EKLIR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|88855451|ref|ZP_01130115.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
 gi|88815358|gb|EAR25216.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
          Length = 64

 Score = 68.2 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF IT +GKV  Q AG RH +  +S K  R      VLAS DAK + +
Sbjct: 1  MPKQKTHSGTKKRFKITGSGKVMKQQAGMRHNLEVKSGKRKRALNQDQVLASQDAKVIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|117923680|ref|YP_864297.1| 50S ribosomal protein L35P [Magnetococcus sp. MC-1]
 gi|166231194|sp|A0L4J8|RL35_MAGSM RecName: Full=50S ribosomal protein L35
 gi|117607436|gb|ABK42891.1| LSU ribosomal protein L35P [Magnetococcus sp. MC-1]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GK+R   A K H + K+S K  R  R   ++   D   V R
Sbjct: 1  MPKLKTHRGAAKRFKVTGSGKIRRNKAFKSHILTKKSAKRKRGFRAGDLVHERDVAGV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KMLPY 64


>gi|313203700|ref|YP_004042357.1| LSU ribosomal protein l35p [Paludibacter propionicigenes WB4]
 gi|312443016|gb|ADQ79372.1| LSU ribosomal protein L35P [Paludibacter propionicigenes WB4]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T +GK++ + A KRH + K++ K  RN   + ++   D   V  
Sbjct: 1  MPKMKTNSGAKKRFTLTGSGKIKRKHAFKRHILTKKTTKQKRNLTHSALVNKTDLTNVKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|291614196|ref|YP_003524353.1| ribosomal protein L35 [Sideroxydans lithotrophicus ES-1]
 gi|291584308|gb|ADE11966.1| ribosomal protein L35 [Sideroxydans lithotrophicus ES-1]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRFS+ A G ++   A KRH + K++ K  R  RG+  +   +   V R
Sbjct: 1  MPKMKTKSGAKKRFSVRAGGSIKRGQAFKRHILTKKTTKNKRQLRGSTGVHETNTASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|145224125|ref|YP_001134803.1| 50S ribosomal protein L35 [Mycobacterium gilvum PYR-GCK]
 gi|315444461|ref|YP_004077340.1| 50S ribosomal protein L35P [Mycobacterium sp. Spyr1]
 gi|189042776|sp|A4T9V0|RL35_MYCGI RecName: Full=50S ribosomal protein L35
 gi|145216611|gb|ABP46015.1| LSU ribosomal protein L35P [Mycobacterium gilvum PYR-GCK]
 gi|315262764|gb|ADT99505.1| LSU ribosomal protein L35P [Mycobacterium sp. Spyr1]
          Length = 64

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH +  ++ K  R   G  V+A  D K+V +
Sbjct: 1  MPKAKTHSGASKRFRKTGTGKIVRQKANRRHLLEHKATKRTRRLDGRTVVAPNDVKRVTK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|325288437|ref|YP_004264618.1| LSU ribosomal protein L35P [Syntrophobotulus glycolicus DSM 8271]
 gi|324963838|gb|ADY54617.1| LSU ribosomal protein L35P [Syntrophobotulus glycolicus DSM 8271]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK+    A KRH + K+S K  RN R + ++   DAK++ R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIVRAHAYKRHILEKKSPKRKRNLRKSTIMHKTDAKRIER 60


>gi|306820005|ref|ZP_07453655.1| 50S ribosomal protein L35 [Eubacterium yurii subsp. margaretiae
          ATCC 43715]
 gi|304551953|gb|EFM39894.1| 50S ribosomal protein L35 [Eubacterium yurii subsp. margaretiae
          ATCC 43715]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T TGK++   A K H + K+S K  RN R   +++  D  ++  
Sbjct: 1  MPKMKTHRGAAKRFKVTGTGKLKRFKAFKSHILTKKSQKRKRNFRKATIVSHGDTMRIT- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|57238869|ref|YP_180005.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58578798|ref|YP_197010.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58616857|ref|YP_196056.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str. Gardel]
 gi|75507511|sp|Q5FH68|RL35_EHRRG RecName: Full=50S ribosomal protein L35
 gi|81672831|sp|Q5HC38|RL35_EHRRW RecName: Full=50S ribosomal protein L35
 gi|57160948|emb|CAH57854.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58416469|emb|CAI27582.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str. Gardel]
 gi|58417424|emb|CAI26628.1| 50S ribosomal protein L35 [Ehrlichia ruminantium str.
          Welgevonden]
          Length = 66

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT V+  +D+ ++I+
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTTVMNQSDS-RIIK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 LFMPY 64


>gi|258404183|ref|YP_003196925.1| 50S ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
 gi|257796410|gb|ACV67347.1| ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
          Length = 65

 Score = 68.2 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T TGK+R   A +RH + K+S K  R  R   V+ SA+ K V R
Sbjct: 1  MPKMKTNKGAAKRFRTTGTGKIRRNRAFRRHILTKKSPKRKRQLRTGPVVDSANTKAVKR 60

Query: 61 NYLPNG 66
            +P G
Sbjct: 61 -LMPYG 65


>gi|258647090|ref|ZP_05734559.1| ribosomal protein L35 [Prevotella tannerae ATCC 51259]
 gi|260853037|gb|EEX72906.1| ribosomal protein L35 [Prevotella tannerae ATCC 51259]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T +GKV  + A   H + K++ K  RN   T +   ++ K+V  
Sbjct: 1  MPKVKTNSSAKKRFVLTGSGKVVRRHAYHSHILTKKTKKQKRNLVHTAIAHKSNVKQVRE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|257092827|ref|YP_003166468.1| 50S ribosomal protein L35 [Candidatus Accumulibacter phosphatis
          clade IIA str. UW-1]
 gi|257045351|gb|ACV34539.1| ribosomal protein L35 [Candidatus Accumulibacter phosphatis clade
          IIA str. UW-1]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF+I+  G+++   A KRH + K+  K  R  RG   + ++D K ++R
Sbjct: 1  MPKMKTKSGAKKRFTISPGGRIKRSHAFKRHILTKKDTKTKRQLRGVTEVHASD-KAMVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|95930294|ref|ZP_01313032.1| ribosomal protein L35 [Desulfuromonas acetoxidans DSM 684]
 gi|95133757|gb|EAT15418.1| ribosomal protein L35 [Desulfuromonas acetoxidans DSM 684]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF  T TGK+R   A   H + K++ K  R+ R   ++ +AD K +
Sbjct: 1  MPKIKTNRGAAKRFRKTGTGKIRRNKAFTSHILTKKTTKRKRDLRHGTIVDAADHKNI 58


>gi|318043027|ref|ZP_07974983.1| 50S ribosomal protein L35 [Synechococcus sp. CB0101]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T +GK   + A + H +  +S K  R      V+   DA  V R
Sbjct: 1  MPKLKTRKAAAKRFKATGSGKFMRRHAFRNHLLDHKSPKRKRFLGTMAVVDERDADNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|227537391|ref|ZP_03967440.1| ribosomal protein L35 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772850|ref|ZP_07082719.1| 50S ribosomal protein L35 [Sphingobacterium spiritivorum ATCC
          33861]
 gi|227242769|gb|EEI92784.1| ribosomal protein L35 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300759021|gb|EFK55848.1| 50S ribosomal protein L35 [Sphingobacterium spiritivorum ATCC
          33861]
          Length = 66

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T TGK+  + A K H + K+S K  RN   T  ++  D   V R
Sbjct: 1  MPKVKTNSSAKKRFKLTGTGKIARKNAFKSHILTKKSTKRKRNLTQTSYVSDGDMGNVKR 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|118580721|ref|YP_901971.1| ribosomal protein L35 [Pelobacter propionicus DSM 2379]
 gi|166199814|sp|A1ARE3|RL35_PELPD RecName: Full=50S ribosomal protein L35
 gi|118503431|gb|ABK99913.1| LSU ribosomal protein L35P [Pelobacter propionicus DSM 2379]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  +A+G+V+   A   H +  ++ K  RN RGT +++  D K + R
Sbjct: 1  MPKIKTNRGAAKRFRKSASGRVKRGNAFTSHILTHKTRKNKRNLRGTSMVSDVDQKNISR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|288801330|ref|ZP_06406784.1| ribosomal protein L35 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331713|gb|EFC70197.1| ribosomal protein L35 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF  T TGK++ + A  RH + K++ K  RN     V+ S+D K+V 
Sbjct: 1  MPKVKTNSGAKKRFKFTGTGKIKRRRAYHRHILTKKTKKQKRNLTHQTVVDSSDIKQVK 59


>gi|268316190|ref|YP_003289909.1| 50S ribosomal protein L35 [Rhodothermus marinus DSM 4252]
 gi|262333724|gb|ACY47521.1| ribosomal protein L35 [Rhodothermus marinus DSM 4252]
          Length = 68

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 40/62 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF +TATGK++ + A   H + K+S K  R+ R   ++ + D ++V R
Sbjct: 1  MPKVKTNSGAKKRFKVTATGKIKRRRAFHSHLLTKKSKKRKRHLRQPALVDATDVRRVRR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|227875289|ref|ZP_03993431.1| ribosomal protein L35 [Mobiluncus mulieris ATCC 35243]
 gi|269978176|ref|ZP_06185126.1| ribosomal protein L35 [Mobiluncus mulieris 28-1]
 gi|306818551|ref|ZP_07452274.1| 50S ribosomal protein L35 [Mobiluncus mulieris ATCC 35239]
 gi|307701039|ref|ZP_07638064.1| ribosomal protein L35 [Mobiluncus mulieris FB024-16]
 gi|227844194|gb|EEJ54361.1| ribosomal protein L35 [Mobiluncus mulieris ATCC 35243]
 gi|269933685|gb|EEZ90269.1| ribosomal protein L35 [Mobiluncus mulieris 28-1]
 gi|304648724|gb|EFM46026.1| 50S ribosomal protein L35 [Mobiluncus mulieris ATCC 35239]
 gi|307614034|gb|EFN93278.1| ribosomal protein L35 [Mobiluncus mulieris FB024-16]
          Length = 64

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF  T +GK+  + A KRH +  +S++  R      V+A +D K+V +
Sbjct: 1  MPKNKTHSGTKKRFRTTGSGKLMRETANKRHLLEHKSSRRTRRLSQDQVVAPSDVKRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|313205746|ref|YP_004044923.1| LSU ribosomal protein l35p [Riemerella anatipestifer DSM 15868]
 gi|312445062|gb|ADQ81417.1| LSU ribosomal protein L35P [Riemerella anatipestifer DSM 15868]
 gi|315022858|gb|EFT35882.1| LSU ribosomal protein L35p [Riemerella anatipestifer RA-YM]
 gi|325336812|gb|ADZ13086.1| Ribosomal protein L35 [Riemerella anatipestifer RA-GD]
          Length = 65

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF++T TGK++ + A K H + K+  K  RN   T  + S+D K V++
Sbjct: 1  MPKLKTKSGAKKRFALTGTGKIKRKNAYKSHILTKKETKQKRNLTQTSYVHSSDEKSVLK 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|317502974|ref|ZP_07961063.1| 50S ribosomal protein L35 [Prevotella salivae DSM 15606]
 gi|315665910|gb|EFV05488.1| 50S ribosomal protein L35 [Prevotella salivae DSM 15606]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF+ T +GKV+   A   H + K++ K  RN     ++  ++ K+V 
Sbjct: 1  MPKVKTNSGAKKRFTFTGSGKVKRHHAYHSHILTKKTKKQKRNLVHQTLVDQSNMKQVR 59


>gi|297626569|ref|YP_003688332.1| 50S ribosomal protein L35 [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
 gi|296922334|emb|CBL56906.1| 50S ribosomal protein L35 [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
          Length = 64

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF IT TGKV    AGK H    +  K  R      VL   DAKK  +
Sbjct: 1  MPKMKTHSGAKKRFRITGTGKVMHARAGKAHLNEHKPTKQTRRLGQDAVLTKPDAKKARK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|302346319|ref|YP_003814617.1| ribosomal protein L35 [Prevotella melaninogenica ATCC 25845]
 gi|302151085|gb|ADK97346.1| ribosomal protein L35 [Prevotella melaninogenica ATCC 25845]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++   + K+V 
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGTNLKQVR 59


>gi|240168027|ref|ZP_04746686.1| 50S ribosomal protein L35 [Mycobacterium kansasii ATCC 12478]
          Length = 64

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH +  + +   R   G   +A+ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPSTRTRRLEGRTAVAANDTKRV 58


>gi|309811038|ref|ZP_07704836.1| ribosomal protein L35 [Dermacoccus sp. Ellin185]
 gi|308435002|gb|EFP58836.1| ribosomal protein L35 [Dermacoccus sp. Ellin185]
          Length = 64

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T  GK+  Q A   H   +R+ +  R     +VLA AD KK+ R
Sbjct: 1  MPKMKTHSGAKKRFRVTGKGKIMRQRARHVHKFEERAKRQSRRLVNDVVLAPADEKKIKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|254491567|ref|ZP_05104746.1| ribosomal protein L35 [Methylophaga thiooxidans DMS010]
 gi|224463045|gb|EEF79315.1| ribosomal protein L35 [Methylophaga thiooxydans DMS010]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +S + KRF  T +GK +   A   H + K+S K  R  R T+ +  AD   V R
Sbjct: 1  MPKLKNHSGAAKRFKRTGSGKFKRSQAFTSHILTKKSTKRKRQLRSTLTICKADHMSV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 KMLPN 64


>gi|198284330|ref|YP_002220651.1| 50S ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC
          53993]
 gi|218667146|ref|YP_002426991.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226712603|sp|B7J7S8|RL35_ACIF2 RecName: Full=50S ribosomal protein L35
 gi|226712604|sp|B5EN55|RL35_ACIF5 RecName: Full=50S ribosomal protein L35
 gi|198248851|gb|ACH84444.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519359|gb|ACK79945.1| ribosomal protein L35 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  T +GK + + A   H + K++ K  R+ R T+V + +D    +R
Sbjct: 1  MPKMKSNRGAAKRFKRTGSGKFKHRQAFLNHILTKKTTKRKRHLRHTLVTSGSDQA-ALR 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 RMLPYG 65


>gi|197118374|ref|YP_002138801.1| 50S ribosomal protein L35 [Geobacter bemidjiensis Bem]
 gi|253700846|ref|YP_003022035.1| ribosomal protein L35 [Geobacter sp. M21]
 gi|226725015|sp|B5EBY1|RL35_GEOBB RecName: Full=50S ribosomal protein L35
 gi|259647412|sp|C6DYJ3|RL35_GEOSM RecName: Full=50S ribosomal protein L35
 gi|197087734|gb|ACH39005.1| ribosomal protein L35 [Geobacter bemidjiensis Bem]
 gi|251775696|gb|ACT18277.1| ribosomal protein L35 [Geobacter sp. M21]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++A++D K +
Sbjct: 1  MPKMKTHRGAAKRFSKTGTGKIKMAHAFTSHILTSKTRKNKRNLRKGGIVAASDHKNI 58


>gi|114319927|ref|YP_741610.1| 50S ribosomal protein L35 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312210|sp|Q0AAL7|RL35_ALHEH RecName: Full=50S ribosomal protein L35
 gi|114226321|gb|ABI56120.1| LSU ribosomal protein L35P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 65

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G+ +   A   H + K+ +K  R  R   ++A AD   +IR
Sbjct: 1  MPKIKTNRGAAKRFKATASGRYKRAHAFHNHILTKKDSKRKRKLRADALVAEADTP-MIR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 RMMPY 64


>gi|148241159|ref|YP_001226316.1| 50S ribosomal protein L35 [Synechococcus sp. RCC307]
 gi|166233047|sp|A5GQ04|RL35_SYNR3 RecName: Full=50S ribosomal protein L35
 gi|147849469|emb|CAK26963.1| 50S ribosomal protein L35 [Synechococcus sp. RCC307]
          Length = 66

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK   + A   H +  +S K  R      V+   D  +V  
Sbjct: 1  MPKLKTRRAAAKRFRVTGSGKFMRRRAFHNHLLDHKSPKRKRYLGTMAVVDERDHDRVS- 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 HMLPY 64


>gi|325116126|emb|CBZ51680.1| unnamed protein product [Neospora caninum Liverpool]
          Length = 437

 Score = 67.4 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 32/55 (58%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
           K +T  S  KRF ITATGK+  + +G++H M  +S +  R  R   VL  A A+K
Sbjct: 358 KPRTRKSIAKRFKITATGKLLYRHSGRQHLMSSKSGRRKRRLRKVCVLTGAMARK 412


>gi|189461812|ref|ZP_03010597.1| hypothetical protein BACCOP_02478 [Bacteroides coprocola DSM
          17136]
 gi|189431406|gb|EDV00391.1| hypothetical protein BACCOP_02478 [Bacteroides coprocola DSM
          17136]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS SKKRF++T TGK++ + A   H + K++ K  RN   + ++ SA+  +V  
Sbjct: 1  MPKVKTNSGSKKRFALTGTGKIKRKHAFHSHILTKKTKKQKRNLVHSGLVHSANLAQVKE 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|171058430|ref|YP_001790779.1| 50S ribosomal protein L35 [Leptothrix cholodnii SP-6]
 gi|226725028|sp|B1XYZ5|RL35_LEPCP RecName: Full=50S ribosomal protein L35
 gi|170775875|gb|ACB34014.1| ribosomal protein L35 [Leptothrix cholodnii SP-6]
          Length = 67

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RGT+ +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGTVAVHETNMGHIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QMLPF 64


>gi|238562603|ref|ZP_00440146.2| 50S ribosomal protein L35 [Burkholderia mallei GB8 horse 4]
 gi|251767932|ref|ZP_02268878.2| 50S ribosomal protein L35 [Burkholderia mallei PRL-20]
 gi|254180002|ref|ZP_04886601.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1655]
 gi|254199737|ref|ZP_04906103.1| 50S ribosomal protein L35 [Burkholderia mallei FMH]
 gi|254206059|ref|ZP_04912411.1| 50S ribosomal protein L35 [Burkholderia mallei JHU]
 gi|254252556|ref|ZP_04945874.1| Ribosomal protein L35 [Burkholderia dolosa AUO158]
 gi|124895165|gb|EAY69045.1| Ribosomal protein L35 [Burkholderia dolosa AUO158]
 gi|147749333|gb|EDK56407.1| 50S ribosomal protein L35 [Burkholderia mallei FMH]
 gi|147753502|gb|EDK60567.1| 50S ribosomal protein L35 [Burkholderia mallei JHU]
 gi|184210542|gb|EDU07585.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1655]
 gi|238522288|gb|EEP85733.1| 50S ribosomal protein L35 [Burkholderia mallei GB8 horse 4]
 gi|243061339|gb|EES43525.1| 50S ribosomal protein L35 [Burkholderia mallei PRL-20]
          Length = 68

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 4  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 62

Query: 61 NYLPN 65
            LP 
Sbjct: 63 AMLPF 67


>gi|120598810|ref|YP_963384.1| 50S ribosomal protein L35 [Shewanella sp. W3-18-1]
 gi|120558903|gb|ABM24830.1| LSU ribosomal protein L35P [Shewanella sp. W3-18-1]
          Length = 82

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   +++ AD   + R
Sbjct: 19 MPKMKTDRGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVSKADVPAIAR 77

Query: 61 NYLPN 65
            LP 
Sbjct: 78 Q-LPY 81


>gi|85858499|ref|YP_460701.1| 50S ribosomal protein L35P [Syntrophus aciditrophicus SB]
 gi|148887118|sp|Q2LR20|RL35_SYNAS RecName: Full=50S ribosomal protein L35
 gi|85721590|gb|ABC76533.1| LSU ribosomal protein L35P [Syntrophus aciditrophicus SB]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T +GKVR   A   H M  ++ K  RN R + +L   D K + R
Sbjct: 1  MPKLKTHRGAAKRFKLTGSGKVRRHHANASHIMTTKTTKRKRNLRKSTILDKRDEKGIKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|58584915|ref|YP_198488.1| ribosomal protein L35 [Wolbachia endosymbiont strain TRS of
          Brugia malayi]
 gi|75507953|sp|Q5GRX8|RL35_WOLTR RecName: Full=50S ribosomal protein L35
 gi|58419231|gb|AAW71246.1| Ribosomal protein L35 [Wolbachia endosymbiont strain TRS of
          Brugia malayi]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF++TA GKV +  +GKRHGM+KRS   IRN RGT VL  +D+ ++++ Y
Sbjct: 2  KLKTKSSVKKRFNLTAKGKVISAQSGKRHGMVKRSKSNIRNQRGTTVLGKSDS-RIVKLY 60

Query: 63 LPNGI 67
          +P GI
Sbjct: 61 IPYGI 65


>gi|255019925|ref|ZP_05291999.1| LSU ribosomal protein L35p [Acidithiobacillus caldus ATCC 51756]
 gi|254970584|gb|EET28072.1| LSU ribosomal protein L35p [Acidithiobacillus caldus ATCC 51756]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +GK + + A   H + K+S K  R+ R T+V + +D    +R
Sbjct: 1  MPKMKTNRGAAKRFKRTGSGKFKHRQAFLNHILTKKSTKRKRHLRHTLVTSGSDQA-ALR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 RMLPY 64


>gi|15827730|ref|NP_301993.1| 50S ribosomal protein L35 [Mycobacterium leprae TN]
 gi|221230207|ref|YP_002503623.1| 50S ribosomal protein L35 [Mycobacterium leprae Br4923]
 gi|13633839|sp|Q9CC21|RL35_MYCLE RecName: Full=50S ribosomal protein L35
 gi|254802462|sp|B8ZRJ6|RL35_MYCLB RecName: Full=50S ribosomal protein L35
 gi|13093281|emb|CAC31776.1| 50S ribosomal protein L35 [Mycobacterium leprae]
 gi|219933314|emb|CAR71490.1| 50S ribosomal protein L35 [Mycobacterium leprae Br4923]
          Length = 64

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q A +RH    + +   R   G   +++ D ++V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLFEHKPSTRTRRLDGHTRVSANDTQRV 58


>gi|303229398|ref|ZP_07316188.1| ribosomal protein L35 [Veillonella atypica ACS-134-V-Col7a]
 gi|303230702|ref|ZP_07317449.1| ribosomal protein L35 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514462|gb|EFL56457.1| ribosomal protein L35 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515934|gb|EFL57886.1| ribosomal protein L35 [Veillonella atypica ACS-134-V-Col7a]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A +D K+V++
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKSDYKRVVK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|332525936|ref|ZP_08402077.1| 50S ribosomal protein L35 [Rubrivivax benzoatilyticus JA2]
 gi|332109487|gb|EGJ10410.1| 50S ribosomal protein L35 [Rubrivivax benzoatilyticus JA2]
          Length = 67

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K+S    R+ RG   +   D   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKSTTRKRHLRGAANVHETDMGHIA- 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 SMLPF 64


>gi|253998431|ref|YP_003050494.1| 50S ribosomal protein L35 [Methylovorus sp. SIP3-4]
 gi|313200506|ref|YP_004039164.1| 50S ribosomal protein L35 [Methylovorus sp. MP688]
 gi|253985110|gb|ACT49967.1| ribosomal protein L35 [Methylovorus sp. SIP3-4]
 gi|312439822|gb|ADQ83928.1| ribosomal protein L35 [Methylovorus sp. MP688]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF     GKV+   +  RH + K++ K  RN RGT ++++ D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAIISATDVKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|304404965|ref|ZP_07386625.1| ribosomal protein L35 [Paenibacillus curdlanolyticus YK9]
 gi|304345844|gb|EFM11678.1| ribosomal protein L35 [Paenibacillus curdlanolyticus YK9]
          Length = 66

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV+   A + H +  +S +  R   G  ++A+ D +++ +
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRFKAYRNHLLSHKSGRQKRVLAGQPLMAAGDVRRLQQ 60

Query: 61 NYL 63
             
Sbjct: 61 GLA 63


>gi|121535638|ref|ZP_01667444.1| ribosomal protein L35 [Thermosinus carboxydivorans Nor1]
 gi|121305808|gb|EAX46744.1| ribosomal protein L35 [Thermosinus carboxydivorans Nor1]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF +T +G+ +   A K H + K+S    RN R   +++ AD ++V R
Sbjct: 1  MPKIKTRKSAAKRFKVTGSGEFKRAKAFKSHILEKKSPARKRNLRKAALVSKADYERVAR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|88657894|ref|YP_507022.1| 50S ribosomal protein L35 [Ehrlichia chaffeensis str. Arkansas]
 gi|148887073|sp|Q2GHR1|RL35_EHRCR RecName: Full=50S ribosomal protein L35
 gi|88599351|gb|ABD44820.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Arkansas]
          Length = 66

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS KKRFS+TATGK+++  + KRHGM KRS + IR  RGT ++ S+D+ ++++
Sbjct: 1  MPKLKTKSSVKKRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNSSDS-RIVK 59

Query: 61 NYLPN 65
           ++P 
Sbjct: 60 LFMPY 64


>gi|254467859|ref|ZP_05081265.1| ribosomal protein L35 [beta proteobacterium KB13]
 gi|207086669|gb|EDZ63952.1| ribosomal protein L35 [beta proteobacterium KB13]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF    +G ++   +  RH + K++ K  R+ RGT +++S D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGSGAIKRTHSHLRHILTKKTTKQKRHLRGTEIISSTDVKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|34540735|ref|NP_905214.1| 50S ribosomal protein L35 [Porphyromonas gingivalis W83]
 gi|188994828|ref|YP_001929080.1| 50S ribosomal protein L35 [Porphyromonas gingivalis ATCC 33277]
 gi|54036282|sp|Q7MVQ7|RL35_PORGI RecName: Full=50S ribosomal protein L35
 gi|226725047|sp|B2RJD8|RL35_PORG3 RecName: Full=50S ribosomal protein L35
 gi|34397049|gb|AAQ66113.1| ribosomal protein L35 [Porphyromonas gingivalis W83]
 gi|188594508|dbj|BAG33483.1| probable 50S ribosomal protein L35 [Porphyromonas gingivalis ATCC
          33277]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNS +KKRF++T TGK++ + A K H + K++ K  RN      +   D   V +
Sbjct: 1  MPKLKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRNLTYFSTVHKVDENAVKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|325856651|ref|ZP_08172289.1| ribosomal protein L35 [Prevotella denticola CRIS 18C-A]
 gi|327313432|ref|YP_004328869.1| 50S ribosomal protein L35 [Prevotella denticola F0289]
 gi|325483365|gb|EGC86340.1| ribosomal protein L35 [Prevotella denticola CRIS 18C-A]
 gi|326944673|gb|AEA20558.1| ribosomal protein L35 [Prevotella denticola F0289]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KTNS +KKRF+ T TGK++   A   H + K++ K  RN     ++  ++ K+V 
Sbjct: 1  MPKQKTNSGAKKRFTFTGTGKIKRHHAYHSHILTKKTKKQKRNLVHQTLVDGSNLKQVR 59


>gi|317968365|ref|ZP_07969755.1| 50S ribosomal protein L35 [Synechococcus sp. CB0205]
          Length = 65

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R      V+   DA  V +
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFMRRHAFRNHLLDHKSPKRKRFLGTMAVVDERDADNV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|320536885|ref|ZP_08036878.1| ribosomal protein L35 [Treponema phagedenis F0421]
 gi|320146268|gb|EFW37891.1| ribosomal protein L35 [Treponema phagedenis F0421]
          Length = 66

 Score = 67.4 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 39/65 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMK+ S++ KRF IT +GKV+ +    RH + K+S K  RN R   +L+ AD K V +
Sbjct: 1  MAKMKSKSAAAKRFKITGSGKVKYKKMNLRHILTKKSPKRKRNLRKPGILSDADTKVVRK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 KLLPY 65


>gi|51245278|ref|YP_065162.1| 50S ribosomal protein L35 [Desulfotalea psychrophila LSv54]
 gi|50876315|emb|CAG36155.1| probable 50S ribosomal protein L35 [Desulfotalea psychrophila
          LSv54]
          Length = 73

 Score = 67.4 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +G+++   A   H + K+S K  R+ R   +++SAD K + +
Sbjct: 9  MPKMKTNRGAAKRFKKTGSGRIKRGKAFTSHILTKKSTKRKRSLRQADLVSSADVKNIKK 68

Query: 61 NYLPN 65
            LP 
Sbjct: 69 -ILPY 72


>gi|206889724|ref|YP_002249045.1| ribosomal protein L35 [Thermodesulfovibrio yellowstonii DSM
          11347]
 gi|226725079|sp|B5YLD0|RL35_THEYD RecName: Full=50S ribosomal protein L35
 gi|206741662|gb|ACI20719.1| ribosomal protein L35 [Thermodesulfovibrio yellowstonii DSM
          11347]
          Length = 66

 Score = 67.4 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T TGK+  + A K H +  + +K  R+ R    +      K IR
Sbjct: 1  MPKLKTHRGAAKRFKVTGTGKIMRRRANKSHLLTGKPSKRTRHLRQIAQVDET-QYKAIR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 MLIPY 64


>gi|222056445|ref|YP_002538807.1| ribosomal protein L35 [Geobacter sp. FRC-32]
 gi|254802453|sp|B9M522|RL35_GEOSF RecName: Full=50S ribosomal protein L35
 gi|221565734|gb|ACM21706.1| ribosomal protein L35 [Geobacter sp. FRC-32]
          Length = 65

 Score = 67.4 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRFS T TGK++   A   H +  ++ K  RN R   ++ + D K + +
Sbjct: 1  MPKIKTHRGAAKRFSKTGTGKIKRSHAFTSHILTSKTRKNKRNLRKGAIVEAVDHKNIAK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|269215920|ref|ZP_06159774.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
 gi|269130179|gb|EEZ61257.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
          Length = 71

 Score = 67.4 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/62 (48%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S SKKRF +T TGK+    A K H   K+S K IR  R   +++SAD K V  
Sbjct: 8  MPKMKTHSGSKKRFRVTGTGKIVRGKAYKSHIKTKKSPKRIRGFRHDGLVSSADKKVVRA 67

Query: 61 NY 62
            
Sbjct: 68 RL 69


>gi|297562011|ref|YP_003680985.1| ribosomal protein L35 [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296846459|gb|ADH68479.1| ribosomal protein L35 [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 64

 Score = 67.0 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +K RF +T +GK+  + A K H +  +++K  R      VL+ ADAK + +
Sbjct: 1  MPKNKTHSGAKDRFKVTGSGKIMRRRANKNHILEHKTSKRKRKLGNEAVLSPADAKNMRK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|148264670|ref|YP_001231376.1| 50S ribosomal protein L35 [Geobacter uraniireducens Rf4]
 gi|189042771|sp|A5G4T5|RL35_GEOUR RecName: Full=50S ribosomal protein L35
 gi|146398170|gb|ABQ26803.1| LSU ribosomal protein L35P [Geobacter uraniireducens Rf4]
          Length = 65

 Score = 67.0 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TGK++   A   H +  ++ K  RN R   ++A+ D K + +
Sbjct: 1  MPKIKTHRGAAKRFRKTGTGKIKRNHAFTSHILTSKTRKNKRNLRKGAIVAAVDHKNIAK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|300865560|ref|ZP_07110339.1| 50S ribosomal protein L35 [Oscillatoria sp. PCC 6506]
 gi|300336432|emb|CBN55489.1| 50S ribosomal protein L35 [Oscillatoria sp. PCC 6506]
          Length = 65

 Score = 67.0 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ +RF  T +GK+  + A K H +  +S+   R     +VL   + + V R
Sbjct: 1  MPKLKTRKSAARRFRATGSGKIVRRKAYKSHLLQHKSSNRKRTLSQMVVLDPTNEENV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|294793959|ref|ZP_06759096.1| ribosomal protein L35 [Veillonella sp. 3_1_44]
 gi|294455529|gb|EFG23901.1| ribosomal protein L35 [Veillonella sp. 3_1_44]
          Length = 65

 Score = 67.0 bits (163), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A AD K+V++
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKADHKRVVK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|261880446|ref|ZP_06006873.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332869|gb|EFA43655.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 65

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNSS+KKRF  T TGK++ + A   H + K++ K  RN   T ++  ++ K+V 
Sbjct: 1  MPKLKTNSSAKKRFRFTGTGKIKRKHAYHSHILTKKTKKQKRNLCQTTLVDKSNLKQVR 59


>gi|297569214|ref|YP_003690558.1| ribosomal protein L35 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925129|gb|ADH85939.1| ribosomal protein L35 [Desulfurivibrio alkaliphilus AHT2]
          Length = 65

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T TGKV  + A   H + K++ K  R  R   ++ + +A  + R
Sbjct: 1  MPKMKTNRGAAKRFKCTGTGKVARRKAFANHILTKKTTKRKRGLRQGAIVDATNAAGIKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -ILPY 64


>gi|325919876|ref|ZP_08181866.1| LSU ribosomal protein L35P [Xanthomonas gardneri ATCC 19865]
 gi|325549660|gb|EGD20524.1| LSU ribosomal protein L35P [Xanthomonas gardneri ATCC 19865]
          Length = 65

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  +   DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTNHVRPEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|50842894|ref|YP_056121.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202]
 gi|282854558|ref|ZP_06263893.1| ribosomal protein L35 [Propionibacterium acnes J139]
 gi|289426427|ref|ZP_06428170.1| ribosomal protein L35 [Propionibacterium acnes SK187]
 gi|289427771|ref|ZP_06429482.1| ribosomal protein L35 [Propionibacterium acnes J165]
 gi|295130950|ref|YP_003581613.1| ribosomal protein L35 [Propionibacterium acnes SK137]
 gi|54036248|sp|Q6A7V2|RL35_PROAC RecName: Full=50S ribosomal protein L35
 gi|50840496|gb|AAT83163.1| 50S ribosomal protein L35 [Propionibacterium acnes KPA171202]
 gi|282582140|gb|EFB87522.1| ribosomal protein L35 [Propionibacterium acnes J139]
 gi|289153155|gb|EFD01873.1| ribosomal protein L35 [Propionibacterium acnes SK187]
 gi|289159035|gb|EFD07228.1| ribosomal protein L35 [Propionibacterium acnes J165]
 gi|291376852|gb|ADE00707.1| ribosomal protein L35 [Propionibacterium acnes SK137]
 gi|332675830|gb|AEE72646.1| 50S ribosomal protein L35 [Propionibacterium acnes 266]
          Length = 68

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF +T +GKV A+ AGKRH    +S++  R   G  VL+  +A KV +
Sbjct: 1  MPKMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLSKGEAAKVKK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|302878340|ref|YP_003846904.1| 50S ribosomal protein L35 [Gallionella capsiferriformans ES-2]
 gi|302581129|gb|ADL55140.1| ribosomal protein L35 [Gallionella capsiferriformans ES-2]
          Length = 65

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF + A G ++   A KRH +  ++ K  R  RGT  + S +   V R
Sbjct: 1  MPKMKTKSGAKKRFVVRAGGSIKRACAFKRHILTSKTTKTKRQLRGTAEVHSTNTAAVRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|303242606|ref|ZP_07329082.1| ribosomal protein L35 [Acetivibrio cellulolyticus CD2]
 gi|302589863|gb|EFL59635.1| ribosomal protein L35 [Acetivibrio cellulolyticus CD2]
          Length = 65

 Score = 67.0 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S+SKKRFS+T TGKV+   A KRH + K++ K  RN R + +++  +A  V +
Sbjct: 1  MPKIKTHSASKKRFSLTGTGKVKRAKAFKRHILTKKTTKRTRNLRKSTIVSDVNAATV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 MLIPY 64


>gi|56416406|ref|YP_153480.1| 50S ribosomal protein L35 [Anaplasma marginale str. St. Maries]
 gi|222474779|ref|YP_002563194.1| ribosomal protein L35 (rpmI) [Anaplasma marginale str. Florida]
 gi|254994637|ref|ZP_05276827.1| 50S ribosomal protein L35 [Anaplasma marginale str. Mississippi]
 gi|255002747|ref|ZP_05277711.1| 50S ribosomal protein L35 [Anaplasma marginale str. Puerto Rico]
 gi|255003879|ref|ZP_05278680.1| 50S ribosomal protein L35 [Anaplasma marginale str. Virginia]
 gi|269958285|ref|YP_003328072.1| 50S ribosomal protein L35 [Anaplasma centrale str. Israel]
 gi|81677673|sp|Q5PBV4|RL35_ANAMM RecName: Full=50S ribosomal protein L35
 gi|254802426|sp|B9KHH6|RL35_ANAMF RecName: Full=50S ribosomal protein L35
 gi|56387638|gb|AAV86225.1| ribosomal protein L35 [Anaplasma marginale str. St. Maries]
 gi|222418915|gb|ACM48938.1| ribosomal protein L35 (rpmI) [Anaplasma marginale str. Florida]
 gi|269848114|gb|ACZ48758.1| 50S ribosomal protein L35 [Anaplasma centrale str. Israel]
          Length = 66

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF +TA+G+V +  + KRHGM KRS + +R  RG   +++ DA +++ 
Sbjct: 1  MPKLKTKSSAKKRFKVTASGRVMSAQSTKRHGMTKRSKRSLRTRRGIAQMSAPDA-RIVA 59

Query: 61 NYLPNGI 67
          +++P  +
Sbjct: 60 SFMPYSL 66


>gi|108799946|ref|YP_640143.1| 50S ribosomal protein L35 [Mycobacterium sp. MCS]
 gi|119869056|ref|YP_939008.1| 50S ribosomal protein L35 [Mycobacterium sp. KMS]
 gi|126435574|ref|YP_001071265.1| 50S ribosomal protein L35 [Mycobacterium sp. JLS]
 gi|123178639|sp|Q1B7P7|RL35_MYCSS RecName: Full=50S ribosomal protein L35
 gi|166231200|sp|A3Q0U7|RL35_MYCSJ RecName: Full=50S ribosomal protein L35
 gi|166231201|sp|A1UHB0|RL35_MYCSK RecName: Full=50S ribosomal protein L35
 gi|108770365|gb|ABG09087.1| LSU ribosomal protein L35P [Mycobacterium sp. MCS]
 gi|119695145|gb|ABL92218.1| LSU ribosomal protein L35P [Mycobacterium sp. KMS]
 gi|126235374|gb|ABN98774.1| LSU ribosomal protein L35P [Mycobacterium sp. JLS]
          Length = 64

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  T TGK+  Q A +RH M  +  K  R   G   +++ DA ++ +
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLMEHKPTKRTRRLAGRTQVSANDAPRINK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|323344265|ref|ZP_08084491.1| 50S ribosomal protein L35 [Prevotella oralis ATCC 33269]
 gi|323094994|gb|EFZ37569.1| 50S ribosomal protein L35 [Prevotella oralis ATCC 33269]
          Length = 65

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KTNS +KKRF  T TGK++   A   H + K++ K  RN     ++  ++ K+V 
Sbjct: 1  MPKVKTNSGAKKRFRFTGTGKIKRNHAYHSHILTKKTKKQKRNLVHQTLVDRSNMKQVR 59


>gi|171463690|ref|YP_001797803.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          necessarius STIR1]
 gi|226725046|sp|B1XV12|RL35_POLNS RecName: Full=50S ribosomal protein L35
 gi|171193228|gb|ACB44189.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          necessarius STIR1]
          Length = 65

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+K RFS+ A G ++   A KRH + K++ K  R+ RG+  +A AD K + R
Sbjct: 1  MPKMKSKSSAKMRFSVRAGGTIKRGQAFKRHILTKKTTKNKRHLRGSAEVAKADIKSI-R 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 SMLPY 64


>gi|255534995|ref|YP_003095366.1| LSU ribosomal protein L35p [Flavobacteriaceae bacterium 3519-10]
 gi|255341191|gb|ACU07304.1| LSU ribosomal protein L35p [Flavobacteriaceae bacterium 3519-10]
          Length = 65

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGK++ + A K H + K+  K  RN   T  +A  D K V+R
Sbjct: 1  MPKLKTKSGAKKRFKLTGTGKIKRKGAFKSHILTKKETKQKRNLTQTSYVAEVDKKSVLR 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|283458460|ref|YP_003363086.1| 50S ribosomal protein L35 [Rothia mucilaginosa DY-18]
 gi|311113267|ref|YP_003984489.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
 gi|283134501|dbj|BAI65266.1| ribosomal protein L35 [Rothia mucilaginosa DY-18]
 gi|310944761|gb|ADP41055.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
          Length = 72

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GKV+ Q A +RH +  +S++  R      ++    AK V +
Sbjct: 9  MPKQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVVKK 68

Query: 61 NY 62
            
Sbjct: 69 ML 70


>gi|161486579|ref|NP_787293.2| 50S ribosomal protein L35 [Tropheryma whipplei str. Twist]
 gi|161501888|ref|NP_789534.2| 50S ribosomal protein L35 [Tropheryma whipplei TW08/27]
          Length = 64

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +G V    AG RH    RS++  R   G   ++ AD+K   +
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGSVSRARAGMRHNFEHRSSRVTRRLTGRQFVSDADSKLARK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|118617267|ref|YP_905599.1| 50S ribosomal protein L35 [Mycobacterium ulcerans Agy99]
 gi|183982463|ref|YP_001850754.1| 50S ribosomal protein L35, RpmL [Mycobacterium marinum M]
 gi|166231203|sp|A0PP59|RL35_MYCUA RecName: Full=50S ribosomal protein L35
 gi|226725038|sp|B2HR13|RL35_MYCMM RecName: Full=50S ribosomal protein L35
 gi|118569377|gb|ABL04128.1| 50S ribosomal protein L35, RpmL [Mycobacterium ulcerans Agy99]
 gi|183175789|gb|ACC40899.1| 50S ribosomal protein L35, RpmL [Mycobacterium marinum M]
          Length = 64

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+S + KRF  T TGK+  Q A +RH +  +S+K  R   G   +A+ D K+V 
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKSSKRTRRLDGRTTVAANDTKRVK 59


>gi|295107329|emb|CBL04872.1| LSU ribosomal protein L35P [Gordonibacter pamelaeae 7-10-1-b]
          Length = 65

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK+    A K H M K+S K  RN R    ++ AD K V R
Sbjct: 1  MPKMKTHRGTAKRFRVTGSGKIMRSKAYKSHIMTKKSQKRKRNFRHETEVSKADQKTVAR 60

Query: 61 NY 62
            
Sbjct: 61 GL 62


>gi|77919021|ref|YP_356836.1| 50S ribosomal protein L35 [Pelobacter carbinolicus DSM 2380]
 gi|148887089|sp|Q3A4P1|RL35_PELCD RecName: Full=50S ribosomal protein L35
 gi|77545104|gb|ABA88666.1| LSU ribosomal protein L35P [Pelobacter carbinolicus DSM 2380]
          Length = 65

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +GK+R   A   H + K+S K  R  R   ++A AD K + R
Sbjct: 1  MPKIKTNRGAAKRFRKTGSGKIRRNKAFTSHILTKKSTKRKRELRQGTLVAKADQKNISR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|225076638|ref|ZP_03719837.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
          NRL30031/H210]
 gi|241758573|ref|ZP_04756688.1| ribosomal protein L35 [Neisseria flavescens SK114]
 gi|261377870|ref|ZP_05982443.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
 gi|261379893|ref|ZP_05984466.1| ribosomal protein L35 [Neisseria subflava NJ9703]
 gi|261400403|ref|ZP_05986528.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
 gi|313668800|ref|YP_004049084.1| 50S ribosomal protein L35 [Neisseria lactamica ST-640]
 gi|319637849|ref|ZP_07992615.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
 gi|224952044|gb|EEG33253.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
          NRL30031/H210]
 gi|241321225|gb|EER57397.1| ribosomal protein L35 [Neisseria flavescens SK114]
 gi|269145720|gb|EEZ72138.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
 gi|269209846|gb|EEZ76301.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
 gi|284797594|gb|EFC52941.1| ribosomal protein L35 [Neisseria subflava NJ9703]
 gi|309378777|emb|CBX22603.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313006262|emb|CBN87724.1| 50S ribosomal protein L35 [Neisseria lactamica 020-06]
 gi|317401004|gb|EFV81659.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A K H + K++ K  R  RGT ++ S D   V +
Sbjct: 1  MPKMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMVDSRDLASVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|39996617|ref|NP_952568.1| 50S ribosomal protein L35 [Geobacter sulfurreducens PCA]
 gi|54036276|sp|Q74D02|RL35_GEOSL RecName: Full=50S ribosomal protein L35
 gi|39983498|gb|AAR34891.1| ribosomal protein L35 [Geobacter sulfurreducens PCA]
 gi|298505630|gb|ADI84353.1| ribosomal protein L35 [Geobacter sulfurreducens KN400]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T TGK++   A   H +  ++ K  R  R + V+A+ D K + +
Sbjct: 1  MPKIKTNRGAAKRFKKTGTGKIKRSHAFTSHILTSKTRKRKRQLRSSAVVAAVDHKNIAK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|237745472|ref|ZP_04575952.1| LSU ribosomal protein L35P [Oxalobacter formigenes HOxBLS]
 gi|229376823|gb|EEO26914.1| LSU ribosomal protein L35P [Oxalobacter formigenes HOxBLS]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG   + ++D   V+R
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKCAQAFKRHILTKKTTKVKRQLRGMTNVNASDVSSVLR 60

Query: 61 NY 62
            
Sbjct: 61 MM 62


>gi|121594739|ref|YP_986635.1| 50S ribosomal protein L35 [Acidovorax sp. JS42]
 gi|222110648|ref|YP_002552912.1| 50S ribosomal protein l35 [Acidovorax ebreus TPSY]
 gi|166231147|sp|A1W8I4|RL35_ACISJ RecName: Full=50S ribosomal protein L35
 gi|254802449|sp|B9MHY0|RL35_DIAST RecName: Full=50S ribosomal protein L35
 gi|120606819|gb|ABM42559.1| LSU ribosomal protein L35P [Acidovorax sp. JS42]
 gi|221730092|gb|ACM32912.1| ribosomal protein L35 [Acidovorax ebreus TPSY]
          Length = 67

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   D   + +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGIVNVHEGDMGSIAK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|320108480|ref|YP_004184070.1| 50S ribosomal protein L35 [Terriglobus saanensis SP1PR4]
 gi|319927001|gb|ADV84076.1| ribosomal protein L35 [Terriglobus saanensis SP1PR4]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF  T TGK++   A  RH +  +  K  R    +  ++ AD  KV R
Sbjct: 1  MPKMKTHSGAAKRFRKTGTGKIKRGQAKMRHILTSKDTKTKRKLGASAFVSDADYHKVSR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|189466354|ref|ZP_03015139.1| hypothetical protein BACINT_02729 [Bacteroides intestinalis DSM
          17393]
 gi|224539837|ref|ZP_03680376.1| hypothetical protein BACCELL_04747 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|189434618|gb|EDV03603.1| hypothetical protein BACINT_02729 [Bacteroides intestinalis DSM
          17393]
 gi|224518547|gb|EEF87652.1| hypothetical protein BACCELL_04747 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   +  +   +  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCHSTTVDVTNVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|258654265|ref|YP_003203421.1| 50S ribosomal protein L35 [Nakamurella multipartita DSM 44233]
 gi|258557490|gb|ACV80432.1| ribosomal protein L35 [Nakamurella multipartita DSM 44233]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKR  +T +GK+    AGKRH + K+S K  R   G   +A ADA ++ R
Sbjct: 1  MPKNKTHSGTKKRIKVTGSGKLTHAGAGKRHNLEKKSTKMTRRMDGAKEIAPADAPRIRR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|255035016|ref|YP_003085637.1| 50S ribosomal protein L35 [Dyadobacter fermentans DSM 18053]
 gi|254947772|gb|ACT92472.1| ribosomal protein L35 [Dyadobacter fermentans DSM 18053]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTNS +KKRF++T TGK++ + A   H + K+SNK  R    T ++  ++ K+V+
Sbjct: 1  MPKMKTNSGAKKRFALTGTGKIKRKHAFHSHILTKKSNKRKRGLVKTGLIDESNEKQVL 59


>gi|190571068|ref|YP_001975426.1| ribosomal protein L35 [Wolbachia endosymbiont of Culex
          quinquefasciatus Pel]
 gi|226725083|sp|B3CLK3|RL35_WOLPP RecName: Full=50S ribosomal protein L35
 gi|190357340|emb|CAQ54771.1| ribosomal protein L35 [Wolbachia endosymbiont of Culex
          quinquefasciatus Pel]
          Length = 68

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ Y
Sbjct: 5  KLKTKSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILNKSDS-RIVKLY 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|322514760|ref|ZP_08067785.1| 50S ribosomal protein L35 [Actinobacillus ureae ATCC 25976]
 gi|322119298|gb|EFX91418.1| 50S ribosomal protein L35 [Actinobacillus ureae ATCC 25976]
          Length = 89

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R  +++A AD   V+ 
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKLMVAKADQVLVVA 84

Query: 61 NYLPN 65
            LP 
Sbjct: 85 C-LPY 88


>gi|331697625|ref|YP_004333864.1| 50S ribosomal protein L35 [Pseudonocardia dioxanivorans CB1190]
 gi|326952314|gb|AEA26011.1| 50S ribosomal protein L35 [Pseudonocardia dioxanivorans CB1190]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S   KR  +T +GK+R Q  G RH +  +S+K  R+  GT+ +A AD K+V +
Sbjct: 1  MPKNKTHSGISKRIKVTGSGKLRRQQTGLRHRLEVKSSKETRDLSGTVPVAKADVKRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|227497642|ref|ZP_03927860.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
 gi|226832913|gb|EEH65296.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  + AGKRH +  +S++  R      V+ +++ ++V +
Sbjct: 1  MPKNKTHSGAKKRFRVTGSGKLMREQAGKRHLLEVKSSRRKRKLSKDQVVDASNLREVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|328944549|ref|ZP_08242010.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Atopobium
          vaginae DSM 15829]
 gi|327490950|gb|EGF22728.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Atopobium
          vaginae DSM 15829]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   +++SADA+ V +
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKETLVSSADAQVVSQ 60

Query: 61 NY 62
            
Sbjct: 61 RM 62


>gi|325954889|ref|YP_004238549.1| 50S ribosomal protein L35 [Weeksella virosa DSM 16922]
 gi|323437507|gb|ADX67971.1| 50S ribosomal protein L35 [Weeksella virosa DSM 16922]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T TGK++ + A K H + K+  K  RN   T ++  AD K V R
Sbjct: 1  MPKLKTKSGAKKRFKLTGTGKIKRKHAFKSHILTKKETKQKRNLTKTGLVDKADEKSVKR 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|71281765|ref|YP_269608.1| 50S ribosomal protein L35 [Colwellia psychrerythraea 34H]
 gi|71147505|gb|AAZ27978.1| ribosomal protein L35 [Colwellia psychrerythraea 34H]
          Length = 101

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G  + + AG RH + KR  K  R+ R   ++A++D K V +
Sbjct: 38 MPKMKTNKGAAKRFKKTASG-YKFKQAGLRHILTKRRTKVKRHLRAKCMIAASDIKSVKK 96

Query: 61 NY 62
            
Sbjct: 97 LL 98


>gi|158313565|ref|YP_001506073.1| ribosomal protein L35 [Frankia sp. EAN1pec]
 gi|226725013|sp|A8LE32|RL35_FRASN RecName: Full=50S ribosomal protein L35
 gi|158108970|gb|ABW11167.1| ribosomal protein L35 [Frankia sp. EAN1pec]
          Length = 64

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 38/63 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ + KRF +T TGK+  + A + H +  ++++  R     + L+SAD +++ R
Sbjct: 1  MPKMKTHTGTGKRFRVTGTGKIMRRRANRAHLLEHKTSRRTRRLYDEVPLSSADNRRIKR 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|194366576|ref|YP_002029186.1| 50S ribosomal protein L35 [Stenotrophomonas maltophilia R551-3]
 gi|254521900|ref|ZP_05133955.1| ribosomal protein L35 [Stenotrophomonas sp. SKA14]
 gi|226725069|sp|B4SQH2|RL35_STRM5 RecName: Full=50S ribosomal protein L35
 gi|194349380|gb|ACF52503.1| ribosomal protein L35 [Stenotrophomonas maltophilia R551-3]
 gi|219719491|gb|EED38016.1| ribosomal protein L35 [Stenotrophomonas sp. SKA14]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTGHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|282896966|ref|ZP_06304970.1| Ribosomal protein L35 [Raphidiopsis brookii D9]
 gi|281198139|gb|EFA73031.1| Ribosomal protein L35 [Raphidiopsis brookii D9]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK+  + A K H +  +++   R+     V+   D   V R
Sbjct: 1  MPKLKTRKAAAKRFRVTGSGKIVRRKAFKNHLLEHKTSGKKRSLSKMAVVDERDEDNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|255628681|gb|ACU14685.1| unknown [Glycine max]
          Length = 138

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H ++K++ K          ++ +D   VI   
Sbjct: 69  KMKTHKASAKRFRVTGQGKIVRRRAGKQHLLVKKNTKRKSRLSKMHAVSRSDYDNVIGA- 127

Query: 63  LPN 65
           LP 
Sbjct: 128 LPY 130


>gi|159904328|ref|YP_001551672.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9211]
 gi|226725049|sp|A9BDA5|RL35_PROM4 RecName: Full=50S ribosomal protein L35
 gi|159889504|gb|ABX09718.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9211]
          Length = 65

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T TGK   + A + H +  +S K  R+     V+   DA  V  
Sbjct: 1  MPKLKTRKAAAKRFKVTGTGKFMRRRAFRNHLLDHKSTKLKRHLATKAVVDERDADNVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|255326344|ref|ZP_05367428.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
 gi|300744015|ref|ZP_07073035.1| ribosomal protein L35 [Rothia dentocariosa M567]
 gi|255296561|gb|EET75894.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
 gi|300380376|gb|EFJ76939.1| ribosomal protein L35 [Rothia dentocariosa M567]
          Length = 64

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GKV+ Q A +RH +  +S++  R      ++    AK V +
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVVKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|91776353|ref|YP_546109.1| 50S ribosomal protein L35P [Methylobacillus flagellatus KT]
 gi|124078995|sp|Q1GZR9|RL35_METFK RecName: Full=50S ribosomal protein L35
 gi|91710340|gb|ABE50268.1| LSU ribosomal protein L35P [Methylobacillus flagellatus KT]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF     GKV+   +  RH + K++ K  RN RGT +++S D K+V R
Sbjct: 1  MPKMKTKSSAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAIISSTDVKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|86607413|ref|YP_476176.1| 50S ribosomal protein L35 [Synechococcus sp. JA-3-3Ab]
 gi|148887119|sp|Q2JR50|RL35_SYNJA RecName: Full=50S ribosomal protein L35
 gi|86555955|gb|ABD00913.1| ribosomal protein L35 [Synechococcus sp. JA-3-3Ab]
          Length = 66

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK   + AG  H +  +++   R   G  +++  D   V R
Sbjct: 1  MPKIKTRKAAAKRFRLTGSGKFMRRRAGHNHLLEHKTSNRKRKLAGVALVSKQDLANV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 LMLPN 64


>gi|310658434|ref|YP_003936155.1| 50S ribosomal protein L35 [Clostridium sticklandii DSM 519]
 gi|308825212|emb|CBH21250.1| 50S ribosomal subunit protein L35 [Clostridium sticklandii]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK++   A   H + K+S K  R  R + ++   D  ++  
Sbjct: 1  MPKMKTHRGAAKRFKVTGSGKLKRSKAFTSHILTKKSAKTKRKLRQSGIVTKGDQSRMA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|118573006|sp|Q6ANB9|RL35_DESPS RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +G+++   A   H + K+S K  R+ R   +++SAD K + +
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRIKRGKAFTSHILTKKSTKRKRSLRQADLVSSADVKNIKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -ILPY 64


>gi|298346969|ref|YP_003719656.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 43063]
 gi|304389320|ref|ZP_07371285.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
 gi|315655515|ref|ZP_07908414.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 51333]
 gi|315656578|ref|ZP_07909465.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
 gi|298237030|gb|ADI68162.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 43063]
 gi|304327438|gb|EFL94671.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
 gi|315490170|gb|EFU79796.1| 50S ribosomal protein L35 [Mobiluncus curtisii ATCC 51333]
 gi|315492533|gb|EFU82137.1| 50S ribosomal protein L35 [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
          Length = 64

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKR  +T +GK+  +   KRH +  +S++  R      V+A AD K++ +
Sbjct: 1  MPKNKTHSGTKKRIRVTGSGKLMREQTNKRHLLEHKSSRRTRRLSQDQVVAPADVKRMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|218130017|ref|ZP_03458821.1| hypothetical protein BACEGG_01600 [Bacteroides eggerthii DSM
          20697]
 gi|317476768|ref|ZP_07936011.1| ribosomal protein L35 [Bacteroides eggerthii 1_2_48FAA]
 gi|217987820|gb|EEC54146.1| hypothetical protein BACEGG_01600 [Bacteroides eggerthii DSM
          20697]
 gi|316906943|gb|EFV28654.1| ribosomal protein L35 [Bacteroides eggerthii 1_2_48FAA]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   +  +   +  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTTVDITNVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|87123292|ref|ZP_01079143.1| ribosomal protein L35 [Synechococcus sp. RS9917]
 gi|86169012|gb|EAQ70268.1| ribosomal protein L35 [Synechococcus sp. RS9917]
          Length = 76

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  TATGK   + A + H +  +S K  R+     V+   D ++V  
Sbjct: 12 MPKLKTRKAAAKRFKATATGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEERVA- 70

Query: 61 NYLPN 65
            +P 
Sbjct: 71 LMMPY 75


>gi|256422765|ref|YP_003123418.1| ribosomal protein L35 [Chitinophaga pinensis DSM 2588]
 gi|256037673|gb|ACU61217.1| ribosomal protein L35 [Chitinophaga pinensis DSM 2588]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 40/63 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KK F +T +G+++   A K H + K+SNK  R+ RG+ ++ SA+   V R
Sbjct: 1  MPKVKTHSRAKKTFKVTGSGQIKRYNAFKSHLLTKKSNKRKRHLRGSTLVDSANLNLVKR 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|298492612|ref|YP_003722789.1| 50S ribosomal protein L35 ['Nostoc azollae' 0708]
 gi|298234530|gb|ADI65666.1| ribosomal protein L35 ['Nostoc azollae' 0708]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + A K H +  +S    RN    +++   DA  V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKSADKKRNMSKMVIVDERDADNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|91784426|ref|YP_559632.1| 50S ribosomal protein L35 [Burkholderia xenovorans LB400]
 gi|170695986|ref|ZP_02887124.1| ribosomal protein L35 [Burkholderia graminis C4D1M]
 gi|209516673|ref|ZP_03265526.1| ribosomal protein L35 [Burkholderia sp. H160]
 gi|295677046|ref|YP_003605570.1| ribosomal protein L35 [Burkholderia sp. CCGE1002]
 gi|296163125|ref|ZP_06845896.1| ribosomal protein L35 [Burkholderia sp. Ch1-1]
 gi|307730400|ref|YP_003907624.1| 50S ribosomal protein L35 [Burkholderia sp. CCGE1003]
 gi|323526734|ref|YP_004228887.1| 50S ribosomal protein L35 [Burkholderia sp. CCGE1001]
 gi|118573000|sp|Q13WF9|RL35_BURXL RecName: Full=50S ribosomal protein L35
 gi|91688380|gb|ABE31580.1| LSU ribosomal protein L35P [Burkholderia xenovorans LB400]
 gi|170139066|gb|EDT07256.1| ribosomal protein L35 [Burkholderia graminis C4D1M]
 gi|209502948|gb|EEA02951.1| ribosomal protein L35 [Burkholderia sp. H160]
 gi|295436889|gb|ADG16059.1| ribosomal protein L35 [Burkholderia sp. CCGE1002]
 gi|295886627|gb|EFG66474.1| ribosomal protein L35 [Burkholderia sp. Ch1-1]
 gi|307584935|gb|ADN58333.1| ribosomal protein L35 [Burkholderia sp. CCGE1003]
 gi|323383736|gb|ADX55827.1| ribosomal protein L35 [Burkholderia sp. CCGE1001]
          Length = 65

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG+  +  +D   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSTAVHDSDLNSV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPF 64


>gi|53805115|ref|YP_113205.1| 50S ribosomal protein L35 [Methylococcus capsulatus str. Bath]
 gi|81682703|sp|Q60AZ2|RL35_METCA RecName: Full=50S ribosomal protein L35
 gi|53758876|gb|AAU93167.1| ribosomal protein L35 [Methylococcus capsulatus str. Bath]
          Length = 65

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +G  +   + +RH + K+S K  R  R   ++  +D + V R
Sbjct: 1  MPKIKTNRGAAKRFKRTGSGGFKCVQSHRRHILTKKSTKRKRQLRSPDMVHPSDVRAVAR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|21231896|ref|NP_637813.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|21243323|ref|NP_642905.1| 50S ribosomal protein L35 [Xanthomonas axonopodis pv. citri str.
          306]
 gi|58582808|ref|YP_201824.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|66767976|ref|YP_242738.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|78048349|ref|YP_364524.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vesicatoria
          str. 85-10]
 gi|84624682|ref|YP_452054.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|166711590|ref|ZP_02242797.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzicola
          BLS256]
 gi|188577597|ref|YP_001914526.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188991102|ref|YP_001903112.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. B100]
 gi|289661760|ref|ZP_06483341.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vasculorum
          NCPPB702]
 gi|325917699|ref|ZP_08179890.1| LSU ribosomal protein L35P [Xanthomonas vesicatoria ATCC 35937]
 gi|325927167|ref|ZP_08188430.1| LSU ribosomal protein L35P [Xanthomonas perforans 91-118]
 gi|54039210|sp|P66283|RL35_XANCP RecName: Full=50S ribosomal protein L35
 gi|54041906|sp|P66282|RL35_XANAC RecName: Full=50S ribosomal protein L35
 gi|75508130|sp|Q5GXY2|RL35_XANOR RecName: Full=50S ribosomal protein L35
 gi|81306047|sp|Q4UW55|RL35_XANC8 RecName: Full=50S ribosomal protein L35
 gi|148887127|sp|Q3BRT9|RL35_XANC5 RecName: Full=50S ribosomal protein L35
 gi|148887128|sp|Q2P0Z7|RL35_XANOM RecName: Full=50S ribosomal protein L35
 gi|226725084|sp|B0RRH1|RL35_XANCB RecName: Full=50S ribosomal protein L35
 gi|226725085|sp|B2SUM1|RL35_XANOP RecName: Full=50S ribosomal protein L35
 gi|21108865|gb|AAM37441.1| 50S ribosomal protein L35 [Xanthomonas axonopodis pv. citri str.
          306]
 gi|21113620|gb|AAM41737.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|58427402|gb|AAW76439.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|66573308|gb|AAY48718.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|78036779|emb|CAJ24472.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. vesicatoria
          str. 85-10]
 gi|84368622|dbj|BAE69780.1| 50S ribosomal protein L35 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|167732862|emb|CAP51056.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. campestris]
 gi|188522049|gb|ACD59994.1| ribosomal protein L35 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|325536093|gb|EGD07898.1| LSU ribosomal protein L35P [Xanthomonas vesicatoria ATCC 35937]
 gi|325542480|gb|EGD13959.1| LSU ribosomal protein L35P [Xanthomonas perforans 91-118]
          Length = 65

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQTNHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|312795974|ref|YP_004028896.1| LSU ribosomal protein L35P [Burkholderia rhizoxinica HKI 454]
 gi|312167749|emb|CBW74752.1| LSU ribosomal protein L35P [Burkholderia rhizoxinica HKI 454]
          Length = 68

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R  RG+  + ++D   V R
Sbjct: 4  MPKMKTKKSASKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTDVHASDVNSV-R 62

Query: 61 NYLPN 65
            +P 
Sbjct: 63 AMMPF 67


>gi|72383097|ref|YP_292452.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL2A]
 gi|124026835|ref|YP_001015950.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL1A]
 gi|148887092|sp|Q46IC9|RL35_PROMT RecName: Full=50S ribosomal protein L35
 gi|166199817|sp|A2C5C6|RL35_PROM1 RecName: Full=50S ribosomal protein L35
 gi|72002947|gb|AAZ58749.1| LSU ribosomal protein L35P [Prochlorococcus marinus str. NATL2A]
 gi|123961903|gb|ABM76686.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. NATL1A]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A   H +  +S K  R+ +   V+   DA+ V R
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFMRRRAFHNHLLDHKSPKLKRHLKTKAVVDERDAENV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|41407451|ref|NP_960287.1| 50S ribosomal protein L35 [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|118466256|ref|YP_882310.1| 50S ribosomal protein L35 [Mycobacterium avium 104]
 gi|254775576|ref|ZP_05217092.1| 50S ribosomal protein L35 [Mycobacterium avium subsp. avium ATCC
          25291]
 gi|54036275|sp|Q740J7|RL35_MYCPA RecName: Full=50S ribosomal protein L35
 gi|166231197|sp|A0QHC2|RL35_MYCA1 RecName: Full=50S ribosomal protein L35
 gi|41395803|gb|AAS03670.1| RpmI [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167543|gb|ABK68440.1| ribosomal protein L35 [Mycobacterium avium 104]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK KT+S + KRF  T TGK+  Q   +RH +  +     R   G   +++ D K+V
Sbjct: 1  MPKAKTHSGASKRFRRTGTGKIVRQKTNRRHLLEHKPTTRTRRLEGRTTVSANDTKRV 58


>gi|303232509|ref|ZP_07319196.1| ribosomal protein L35 [Atopobium vaginae PB189-T1-4]
 gi|302481393|gb|EFL44466.1| ribosomal protein L35 [Atopobium vaginae PB189-T1-4]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL +AD+  V +
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLTAADSHNVSQ 60

Query: 61 NY 62
            
Sbjct: 61 RM 62


>gi|323704474|ref|ZP_08116052.1| ribosomal protein L35 [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535936|gb|EGB25709.1| ribosomal protein L35 [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF++T TGKV+   A KRH + K++ K  RN R    L+  DAK + R
Sbjct: 1  MPKMKTHSGAAKRFALTKTGKVKRSKAFKRHILTKKTRKTKRNLRKIAYLSGVDAKNIKR 60


>gi|221194630|ref|ZP_03567687.1| ribosomal protein L35 [Atopobium rimae ATCC 49626]
 gi|221185534|gb|EEE17924.1| ribosomal protein L35 [Atopobium rimae ATCC 49626]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL++AD   V
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLSAADTAVV 58


>gi|53712978|ref|YP_098970.1| 50S ribosomal protein L35 [Bacteroides fragilis YCH46]
 gi|60681190|ref|YP_211334.1| 50S ribosomal protein L35 [Bacteroides fragilis NCTC 9343]
 gi|253563044|ref|ZP_04840501.1| 50S ribosomal protein L35 [Bacteroides sp. 3_2_5]
 gi|265763075|ref|ZP_06091643.1| ribosomal protein L35 [Bacteroides sp. 2_1_16]
 gi|81315741|sp|Q5LEQ4|RL35_BACFN RecName: Full=50S ribosomal protein L35
 gi|81690704|sp|Q64VP0|RL35_BACFR RecName: Full=50S ribosomal protein L35
 gi|52215843|dbj|BAD48436.1| 50S ribosomal protein L35 [Bacteroides fragilis YCH46]
 gi|60492624|emb|CAH07396.1| putative 50S ribosomal protein L35 [Bacteroides fragilis NCTC
          9343]
 gi|251946820|gb|EES87102.1| 50S ribosomal protein L35 [Bacteroides sp. 3_2_5]
 gi|263255683|gb|EEZ27029.1| ribosomal protein L35 [Bacteroides sp. 2_1_16]
 gi|301162679|emb|CBW22226.1| putative 50S ribosomal protein L35 [Bacteroides fragilis 638R]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K+S K  RN   +  + + +  +V  
Sbjct: 1  MPKMKTNSGSKKRFALTGTGKIKRKHAFHSHILTKKSKKRKRNLCYSTTVDTTNVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|117928475|ref|YP_873026.1| 50S ribosomal protein L35P [Acidothermus cellulolyticus 11B]
 gi|166231145|sp|A0LUD0|RL35_ACIC1 RecName: Full=50S ribosomal protein L35
 gi|117648938|gb|ABK53040.1| LSU ribosomal protein L35P [Acidothermus cellulolyticus 11B]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT++ + KRF +T TGK+  + A + H +  + ++  R     + +A+AD  ++ R
Sbjct: 1  MPKFKTHTGAGKRFRVTGTGKLMRRRANRNHLLEHKPSRRTRRLWNEVPVAAADTARMRR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|284048035|ref|YP_003398374.1| ribosomal protein L35 [Acidaminococcus fermentans DSM 20731]
 gi|283952256|gb|ADB47059.1| ribosomal protein L35 [Acidaminococcus fermentans DSM 20731]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF  TA+G+ +   A + H +  +S    RN R   ++   D ++V +
Sbjct: 1  MPKMKTRRSAAKRFKATASGEFKRGKAFRSHILEHKSPTRKRNLRKAALVHKTDHERVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|187924730|ref|YP_001896372.1| 50S ribosomal protein L35 [Burkholderia phytofirmans PsJN]
 gi|226724978|sp|B2SZG0|RL35_BURPP RecName: Full=50S ribosomal protein L35
 gi|187715924|gb|ACD17148.1| ribosomal protein L35 [Burkholderia phytofirmans PsJN]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG+  +  AD   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSTAVHDADMNSV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPF 64


>gi|225181659|ref|ZP_03735099.1| ribosomal protein L35 [Dethiobacter alkaliphilus AHT 1]
 gi|225167640|gb|EEG76451.1| ribosomal protein L35 [Dethiobacter alkaliphilus AHT 1]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KRF  T +GK +   A   H + K++ K  R  R   V+ +A+ K++ +
Sbjct: 1  MPKMKTHSGAAKRFKKTGSGKYKRSRANHSHILEKKAPKRKRRLRKNSVVCAAETKRLDK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|224142343|ref|XP_002324518.1| predicted protein [Populus trichocarpa]
 gi|222865952|gb|EEF03083.1| predicted protein [Populus trichocarpa]
          Length = 150

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI   
Sbjct: 81  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSDYDNVIGA- 139

Query: 63  LPN 65
           LP 
Sbjct: 140 LPY 142


>gi|254432435|ref|ZP_05046138.1| ribosomal protein L35 [Cyanobium sp. PCC 7001]
 gi|197626888|gb|EDY39447.1| ribosomal protein L35 [Cyanobium sp. PCC 7001]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T +GK   + A + H +  +S K  R      V+   DA  V  
Sbjct: 1  MPKLKTRKAAAKRFKATGSGKFLRRRAFRNHLLDHKSPKRKRYLGTMAVVDERDADNVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|183221769|ref|YP_001839765.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Paris)']
 gi|189911843|ref|YP_001963398.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|226725026|sp|B0SCH3|RL35_LEPBA RecName: Full=50S ribosomal protein L35
 gi|226725027|sp|B0SKZ6|RL35_LEPBP RecName: Full=50S ribosomal protein L35
 gi|76576278|gb|ABA53852.1| L35 [Leptospira biflexa serovar Patoc]
 gi|167776519|gb|ABZ94820.1| 50S Ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167780191|gb|ABZ98489.1| 50S ribosomal protein L35 [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Paris)']
          Length = 66

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KTN ++ KRF  T +GK++   A +RH + K+S K    +RG  V+   D  +V +
Sbjct: 1  MYKLKTNRAAAKRFKFTKSGKIKRGCAFRRHILEKKSPKMKHQSRGMHVIHETDYNRVEK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 -LLPYG 65


>gi|53719556|ref|YP_108542.1| 50S ribosomal protein L35 [Burkholderia pseudomallei K96243]
 gi|53725298|ref|YP_102785.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 23344]
 gi|76810161|ref|YP_333292.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710b]
 gi|78066088|ref|YP_368857.1| 50S ribosomal protein L35 [Burkholderia sp. 383]
 gi|83721518|ref|YP_443109.1| 50S ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|107022550|ref|YP_620877.1| 50S ribosomal protein L35 [Burkholderia cenocepacia AU 1054]
 gi|116689499|ref|YP_835122.1| 50S ribosomal protein L35 [Burkholderia cenocepacia HI2424]
 gi|121598724|ref|YP_992864.1| 50S ribosomal protein L35 [Burkholderia mallei SAVP1]
 gi|126442094|ref|YP_001058754.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 668]
 gi|126451250|ref|YP_001080526.1| 50S ribosomal protein L35 [Burkholderia mallei NCTC 10247]
 gi|126451610|ref|YP_001066007.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106a]
 gi|134282343|ref|ZP_01769048.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 305]
 gi|134295549|ref|YP_001119284.1| 50S ribosomal protein L35 [Burkholderia vietnamiensis G4]
 gi|167562966|ref|ZP_02355882.1| 50S ribosomal protein L35 [Burkholderia oklahomensis EO147]
 gi|167570154|ref|ZP_02363028.1| 50S ribosomal protein L35 [Burkholderia oklahomensis C6786]
 gi|167582116|ref|ZP_02374990.1| 50S ribosomal protein L35 [Burkholderia thailandensis TXDOH]
 gi|167587361|ref|ZP_02379749.1| 50S ribosomal protein L35 [Burkholderia ubonensis Bu]
 gi|167620274|ref|ZP_02388905.1| 50S ribosomal protein L35 [Burkholderia thailandensis Bt4]
 gi|167719846|ref|ZP_02403082.1| 50S ribosomal protein L35 [Burkholderia pseudomallei DM98]
 gi|167738848|ref|ZP_02411622.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 14]
 gi|167816068|ref|ZP_02447748.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 91]
 gi|167824443|ref|ZP_02455914.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 9]
 gi|167836850|ref|ZP_02463733.1| 50S ribosomal protein L35 [Burkholderia thailandensis MSMB43]
 gi|167845976|ref|ZP_02471484.1| 50S ribosomal protein L35 [Burkholderia pseudomallei B7210]
 gi|167894554|ref|ZP_02481956.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 7894]
 gi|167902957|ref|ZP_02490162.1| 50S ribosomal protein L35 [Burkholderia pseudomallei NCTC 13177]
 gi|167911194|ref|ZP_02498285.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 112]
 gi|167919218|ref|ZP_02506309.1| 50S ribosomal protein L35 [Burkholderia pseudomallei BCC215]
 gi|170701130|ref|ZP_02892104.1| ribosomal protein L35 [Burkholderia ambifaria IOP40-10]
 gi|170732804|ref|YP_001764751.1| 50S ribosomal protein L35 [Burkholderia cenocepacia MC0-3]
 gi|171318444|ref|ZP_02907599.1| ribosomal protein L35 [Burkholderia ambifaria MEX-5]
 gi|172060453|ref|YP_001808105.1| 50S ribosomal protein L35 [Burkholderia ambifaria MC40-6]
 gi|186476314|ref|YP_001857784.1| 50S ribosomal protein L35 [Burkholderia phymatum STM815]
 gi|189350302|ref|YP_001945930.1| 50S ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
 gi|206559849|ref|YP_002230613.1| 50S ribosomal protein L35 [Burkholderia cenocepacia J2315]
 gi|217423611|ref|ZP_03455112.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 576]
 gi|221197735|ref|ZP_03570781.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2M]
 gi|221204707|ref|ZP_03577724.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2]
 gi|221214902|ref|ZP_03587870.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD1]
 gi|226199698|ref|ZP_03795251.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pakistan 9]
 gi|237812018|ref|YP_002896469.1| ribosomal protein L35 [Burkholderia pseudomallei MSHR346]
 gi|238027729|ref|YP_002911960.1| 50S ribosomal protein L35 [Burkholderia glumae BGR1]
 gi|242314699|ref|ZP_04813715.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106b]
 gi|254177553|ref|ZP_04884208.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 10399]
 gi|254188584|ref|ZP_04895095.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pasteur
          52237]
 gi|254197341|ref|ZP_04903763.1| 50S ribosomal protein L35 [Burkholderia pseudomallei S13]
 gi|254261827|ref|ZP_04952881.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710a]
 gi|254297837|ref|ZP_04965290.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 406e]
 gi|254358430|ref|ZP_04974703.1| 50S ribosomal protein L35 [Burkholderia mallei 2002721280]
 gi|257139338|ref|ZP_05587600.1| 50S ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|330816671|ref|YP_004360376.1| 50S ribosomal protein L35 [Burkholderia gladioli BSR3]
 gi|81685103|sp|Q62KI4|RL35_BURMA RecName: Full=50S ribosomal protein L35
 gi|81690334|sp|Q63TM4|RL35_BURPS RecName: Full=50S ribosomal protein L35
 gi|124078993|sp|Q1BWV1|RL35_BURCA RecName: Full=50S ribosomal protein L35
 gi|148887066|sp|Q3JT11|RL35_BURP1 RecName: Full=50S ribosomal protein L35
 gi|148887067|sp|Q39H53|RL35_BURS3 RecName: Full=50S ribosomal protein L35
 gi|148887068|sp|Q2SVE0|RL35_BURTA RecName: Full=50S ribosomal protein L35
 gi|166231161|sp|A0K6V2|RL35_BURCH RecName: Full=50S ribosomal protein L35
 gi|166231162|sp|A3MJU0|RL35_BURM7 RecName: Full=50S ribosomal protein L35
 gi|166231163|sp|A1V3R1|RL35_BURMS RecName: Full=50S ribosomal protein L35
 gi|166231164|sp|A3NUI6|RL35_BURP0 RecName: Full=50S ribosomal protein L35
 gi|166231165|sp|A3N8T3|RL35_BURP6 RecName: Full=50S ribosomal protein L35
 gi|166231166|sp|A4JDU6|RL35_BURVG RecName: Full=50S ribosomal protein L35
 gi|226713830|sp|B1YP15|RL35_BURA4 RecName: Full=50S ribosomal protein L35
 gi|226723582|sp|B1K093|RL35_BURCC RecName: Full=50S ribosomal protein L35
 gi|226724976|sp|B4E7I7|RL35_BURCJ RecName: Full=50S ribosomal protein L35
 gi|226724977|sp|B2JJJ5|RL35_BURP8 RecName: Full=50S ribosomal protein L35
 gi|52209970|emb|CAH35942.1| 50S ribosomal protein L35 [Burkholderia pseudomallei K96243]
 gi|52428721|gb|AAU49314.1| ribosomal protein L35 [Burkholderia mallei ATCC 23344]
 gi|76579614|gb|ABA49089.1| ribosomal protein L35 [Burkholderia pseudomallei 1710b]
 gi|77966833|gb|ABB08213.1| LSU ribosomal protein L35P [Burkholderia sp. 383]
 gi|83655343|gb|ABC39406.1| ribosomal protein L35 [Burkholderia thailandensis E264]
 gi|105892739|gb|ABF75904.1| LSU ribosomal protein L35P [Burkholderia cenocepacia AU 1054]
 gi|116647588|gb|ABK08229.1| LSU ribosomal protein L35P [Burkholderia cenocepacia HI2424]
 gi|121227534|gb|ABM50052.1| 50S ribosomal protein L35 [Burkholderia mallei SAVP1]
 gi|126221587|gb|ABN85093.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 668]
 gi|126225252|gb|ABN88792.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106a]
 gi|126244120|gb|ABO07213.1| 50S ribosomal protein L35 [Burkholderia mallei NCTC 10247]
 gi|134138706|gb|ABO54449.1| LSU ribosomal protein L35P [Burkholderia vietnamiensis G4]
 gi|134246381|gb|EBA46470.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 305]
 gi|148027557|gb|EDK85578.1| 50S ribosomal protein L35 [Burkholderia mallei 2002721280]
 gi|157807063|gb|EDO84233.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 406e]
 gi|157936263|gb|EDO91933.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pasteur
          52237]
 gi|160698592|gb|EDP88562.1| 50S ribosomal protein L35 [Burkholderia mallei ATCC 10399]
 gi|169654082|gb|EDS86775.1| 50S ribosomal protein L35 [Burkholderia pseudomallei S13]
 gi|169816046|gb|ACA90629.1| ribosomal protein L35 [Burkholderia cenocepacia MC0-3]
 gi|170133952|gb|EDT02306.1| ribosomal protein L35 [Burkholderia ambifaria IOP40-10]
 gi|171096358|gb|EDT41260.1| ribosomal protein L35 [Burkholderia ambifaria MEX-5]
 gi|171992970|gb|ACB63889.1| ribosomal protein L35 [Burkholderia ambifaria MC40-6]
 gi|184192773|gb|ACC70738.1| ribosomal protein L35 [Burkholderia phymatum STM815]
 gi|189334324|dbj|BAG43394.1| large subunit ribosomal protein L35 [Burkholderia multivorans
          ATCC 17616]
 gi|198035890|emb|CAR51782.1| 50S ribosomal protein L35 [Burkholderia cenocepacia J2315]
 gi|217393469|gb|EEC33490.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 576]
 gi|221165129|gb|EED97607.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD1]
 gi|221175564|gb|EEE07994.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2]
 gi|221181667|gb|EEE14068.1| 50S ribosomal protein L35 [Burkholderia multivorans CGD2M]
 gi|225928284|gb|EEH24318.1| 50S ribosomal protein L35 [Burkholderia pseudomallei Pakistan 9]
 gi|237503387|gb|ACQ95705.1| ribosomal protein L35 [Burkholderia pseudomallei MSHR346]
 gi|237876923|gb|ACR29256.1| Ribosomal protein L35 [Burkholderia glumae BGR1]
 gi|242137938|gb|EES24340.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1106b]
 gi|254220516|gb|EET09900.1| 50S ribosomal protein L35 [Burkholderia pseudomallei 1710a]
 gi|325528725|gb|EGD05795.1| 50S ribosomal protein L35 [Burkholderia sp. TJI49]
 gi|327369064|gb|AEA60420.1| 50S ribosomal protein L35 [Burkholderia gladioli BSR3]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R
Sbjct: 1  MPKMKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPF 64


>gi|33241270|ref|NP_876212.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp. marinus
          str. CCMP1375]
 gi|54036291|sp|Q7V9L2|RL35_PROMA RecName: Full=50S ribosomal protein L35
 gi|33238800|gb|AAQ00865.1| Ribosomal protein L35 [Prochlorococcus marinus subsp. marinus
          str. CCMP1375]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T TGK   + A + H +  +S+K  R+     V+   D++ V  
Sbjct: 1  MPKLKTRKAAAKRFKVTGTGKFMRRRAFRNHLLDHKSSKLKRHLGTKAVVDERDSENVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|221066196|ref|ZP_03542301.1| ribosomal protein L35 [Comamonas testosteroni KF-1]
 gi|264679164|ref|YP_003279071.1| ribosomal protein L35 [Comamonas testosteroni CNB-2]
 gi|299533558|ref|ZP_07046934.1| 50S ribosomal protein L35 [Comamonas testosteroni S44]
 gi|220711219|gb|EED66587.1| ribosomal protein L35 [Comamonas testosteroni KF-1]
 gi|262209677|gb|ACY33775.1| ribosomal protein L35 [Comamonas testosteroni CNB-2]
 gi|298718464|gb|EFI59445.1| 50S ribosomal protein L35 [Comamonas testosteroni S44]
          Length = 67

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + + S D   + +
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGIVNVHSGDMGSIAK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|119716686|ref|YP_923651.1| 50S ribosomal protein L35 [Nocardioides sp. JS614]
 gi|166231207|sp|A1SJH9|RL35_NOCSJ RecName: Full=50S ribosomal protein L35
 gi|119537347|gb|ABL81964.1| LSU ribosomal protein L35P [Nocardioides sp. JS614]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF +T +GK+  + AGKRH + K+++K  R   GT  LA AD K+  +
Sbjct: 1  MPKNKTHSGASKRFRVTGSGKILREKAGKRHNLEKKASKVTRRMTGTTELAKADVKRAKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|238018998|ref|ZP_04599424.1| hypothetical protein VEIDISOL_00860 [Veillonella dispar ATCC
          17748]
 gi|269798228|ref|YP_003312128.1| ribosomal protein L35 [Veillonella parvula DSM 2008]
 gi|282850466|ref|ZP_06259845.1| ribosomal protein L35 [Veillonella parvula ATCC 17745]
 gi|294792089|ref|ZP_06757237.1| ribosomal protein L35 [Veillonella sp. 6_1_27]
 gi|313892952|ref|ZP_07826529.1| ribosomal protein L35 [Veillonella sp. oral taxon 158 str. F0412]
 gi|237864482|gb|EEP65772.1| hypothetical protein VEIDISOL_00860 [Veillonella dispar ATCC
          17748]
 gi|269094857|gb|ACZ24848.1| ribosomal protein L35 [Veillonella parvula DSM 2008]
 gi|282579959|gb|EFB85363.1| ribosomal protein L35 [Veillonella parvula ATCC 17745]
 gi|294457319|gb|EFG25681.1| ribosomal protein L35 [Veillonella sp. 6_1_27]
 gi|313442305|gb|EFR60720.1| ribosomal protein L35 [Veillonella sp. oral taxon 158 str. F0412]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T TG+ +   A K H + K+S    RN R   ++A AD K+V +
Sbjct: 1  MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKADHKRVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|118483883|gb|ABK93832.1| unknown [Populus trichocarpa]
          Length = 150

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI   
Sbjct: 81  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSDYDNVIGA- 139

Query: 63  LPN 65
           LP 
Sbjct: 140 LPY 142


>gi|300778188|ref|ZP_07088046.1| 50S ribosomal protein L35 [Chryseobacterium gleum ATCC 35910]
 gi|300503698|gb|EFK34838.1| 50S ribosomal protein L35 [Chryseobacterium gleum ATCC 35910]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF++T +GK++ + A K H + K+  K  RN   T  +A  D K V R
Sbjct: 1  MPKLKTKSGAKKRFALTGSGKIKRKNAYKSHILTKKETKQKRNLTTTSYVAKVDEKSVQR 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|29345834|ref|NP_809337.1| 50S ribosomal protein L35 [Bacteroides thetaiotaomicron VPI-5482]
 gi|160883806|ref|ZP_02064809.1| hypothetical protein BACOVA_01778 [Bacteroides ovatus ATCC 8483]
 gi|253567821|ref|ZP_04845232.1| 50S ribosomal protein L35 [Bacteroides sp. 1_1_6]
 gi|255008479|ref|ZP_05280605.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
 gi|260170788|ref|ZP_05757200.1| 50S ribosomal protein L35 [Bacteroides sp. D2]
 gi|298384718|ref|ZP_06994278.1| ribosomal protein L35 [Bacteroides sp. 1_1_14]
 gi|299149168|ref|ZP_07042229.1| ribosomal protein L35 [Bacteroides sp. 3_1_23]
 gi|313146207|ref|ZP_07808400.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
 gi|54036307|sp|Q8AAP0|RL35_BACTN RecName: Full=50S ribosomal protein L35
 gi|29337727|gb|AAO75531.1| 50S ribosomal protein L35 [Bacteroides thetaiotaomicron VPI-5482]
 gi|156110891|gb|EDO12636.1| hypothetical protein BACOVA_01778 [Bacteroides ovatus ATCC 8483]
 gi|251841894|gb|EES69974.1| 50S ribosomal protein L35 [Bacteroides sp. 1_1_6]
 gi|298262997|gb|EFI05861.1| ribosomal protein L35 [Bacteroides sp. 1_1_14]
 gi|298512835|gb|EFI36723.1| ribosomal protein L35 [Bacteroides sp. 3_1_23]
 gi|313134974|gb|EFR52334.1| 50S ribosomal protein L35 [Bacteroides fragilis 3_1_12]
          Length = 65

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K+S K  RN   +  + + +  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKSKKRKRNLCYSTTVDTTNVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|164687659|ref|ZP_02211687.1| hypothetical protein CLOBAR_01301 [Clostridium bartlettii DSM
          16795]
 gi|164603433|gb|EDQ96898.1| hypothetical protein CLOBAR_01301 [Clostridium bartlettii DSM
          16795]
          Length = 64

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++  
Sbjct: 1  MPKMKTHRGAAKRLRKTGSGKLKRNKAYKSHILTKKSPKTKMNLRKSAIVSDGDAKRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|307244262|ref|ZP_07526377.1| ribosomal protein L35 [Peptostreptococcus stomatis DSM 17678]
 gi|306492412|gb|EFM64450.1| ribosomal protein L35 [Peptostreptococcus stomatis DSM 17678]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++  
Sbjct: 1  MPKMKTHRGAAKRLKRTGSGKLKRAKAYKSHILTKKSPKTKMNLRQSTLVSDGDAKRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|227498535|ref|ZP_03928679.1| 50S ribosomal protein L35 [Acidaminococcus sp. D21]
 gi|226903991|gb|EEH89909.1| 50S ribosomal protein L35 [Acidaminococcus sp. D21]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF  TATG+ +   A + H +  +S    RN R   ++   D ++V +
Sbjct: 1  MPKMKTRRSAAKRFKATATGEFKRAKAFRSHILEHKSPTRKRNLRKAALVHKTDHERVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|319943685|ref|ZP_08017966.1| 50S ribosomal protein L35 [Lautropia mirabilis ATCC 51599]
 gi|319742918|gb|EFV95324.1| 50S ribosomal protein L35 [Lautropia mirabilis ATCC 51599]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG + +  AD + +  
Sbjct: 1  MPKMKTKKSASKRFRVRPGGTVKRGQAYKRHILTKKTTKVKRHLRGAVDVHEADTRSI-H 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|119511880|ref|ZP_01630979.1| Ribosomal protein L35 [Nodularia spumigena CCY9414]
 gi|119463448|gb|EAW44386.1| Ribosomal protein L35 [Nodularia spumigena CCY9414]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + A K H +  +S+   R+   + ++   D   V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKSSNKKRSLSKSTLVHERDEDNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|320353538|ref|YP_004194877.1| 50S ribosomal protein L35P [Desulfobulbus propionicus DSM 2032]
 gi|320122040|gb|ADW17586.1| LSU ribosomal protein L35P [Desulfobulbus propionicus DSM 2032]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T  G++R   A   H + K+S K  RN R + ++A  D K V R
Sbjct: 1  MPKMKTNRGAAKRFKATGGGRIRRAKAFASHILTKKSTKRKRNLRKSALIAEVDTKAVRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|162455528|ref|YP_001617895.1| 50S ribosomal protein L35 [Sorangium cellulosum 'So ce 56']
 gi|189042790|sp|A9ESS9|RL35_SORC5 RecName: Full=50S ribosomal protein L35
 gi|161166110|emb|CAN97415.1| 50S ribosomal protein L35 [Sorangium cellulosum 'So ce 56']
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF +T +G++R    G  H M ++S K +R  R   ++ SA  K+V +
Sbjct: 1  MPKMKTNRAAAKRFKVTGSGRIRRSKGGLNHCMQEKSKKRLRRLRKNDMVDSAMEKRV-K 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LLLPYG 65


>gi|30248959|ref|NP_841029.1| 50S ribosomal protein L35 [Nitrosomonas europaea ATCC 19718]
 gi|54036301|sp|Q82VV3|RL35_NITEU RecName: Full=50S ribosomal protein L35
 gi|30138576|emb|CAD84867.1| Ribosomal protein L35 [Nitrosomonas europaea ATCC 19718]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF + A G ++   A KRH + K++ K  R  RG   + ++D   V R
Sbjct: 1  MPKMKTKKSAAKRFKVRAGGSIKRSQAFKRHILTKKTTKNKRQLRGVAAVHASDMVSV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 VMLPY 64


>gi|323356732|ref|YP_004223128.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
 gi|323273103|dbj|BAJ73248.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
          Length = 64

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  Q AG RH +  +++K  R      VLA  D+K   +
Sbjct: 1  MPKQKTHSGAKKRFKLTGSGKLMKQQAGMRHNLEGKASKRTRRLNQEQVLAKGDSKVAKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|289668711|ref|ZP_06489786.1| 50S ribosomal protein L35 [Xanthomonas campestris pv. musacearum
          NCPPB4381]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +   A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKCGHANRSHILTKKATKRKRNLRQPNHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|110640212|ref|YP_678255.1| 50S ribosomal protein L35 [Cytophaga hutchinsonii ATCC 33406]
 gi|118573005|sp|Q11UK1|RL35_CYTH3 RecName: Full=50S ribosomal protein L35
 gi|110282893|gb|ABG61079.1| 50S ribosomal protein L35 [Cytophaga hutchinsonii ATCC 33406]
          Length = 64

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT S +KKRF +T +GK++ ++A   H + K+S K  RN     ++++AD   V 
Sbjct: 1  MPKVKTKSGAKKRFKLTGSGKIKRKSAYHSHILTKKSTKRKRNLVHAHLVSAADESNVR 59


>gi|134095004|ref|YP_001100079.1| 50S ribosomal protein L35 [Herminiimonas arsenicoxydans]
 gi|166231191|sp|A4G617|RL35_HERAR RecName: Full=50S ribosomal protein L35
 gi|133738907|emb|CAL61954.1| 50S ribosomal protein L35 [Herminiimonas arsenicoxydans]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R  RG++ +   +   V R
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSVGVHDTNMVSV-R 59

Query: 61 NYLPN 65
            +PN
Sbjct: 60 AMMPN 64


>gi|78222625|ref|YP_384372.1| 50S ribosomal protein L35 [Geobacter metallireducens GS-15]
 gi|148887075|sp|Q39VS7|RL35_GEOMG RecName: Full=50S ribosomal protein L35
 gi|78193880|gb|ABB31647.1| LSU ribosomal protein L35P [Geobacter metallireducens GS-15]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK++  +A   H +  ++ K  R  R + ++A+ D K + R
Sbjct: 1  MPKIKTNRGAAKRFRKTASGKIKRNSAFTSHILTSKTRKRKRQLRSSSIVAAVDQKNIAR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|42527658|ref|NP_972756.1| 50S ribosomal protein L35 [Treponema denticola ATCC 35405]
 gi|54036274|sp|Q73KR2|RL35_TREDE RecName: Full=50S ribosomal protein L35
 gi|41818486|gb|AAS12675.1| ribosomal protein L35 [Treponema denticola ATCC 35405]
          Length = 66

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  ++KKRFSITA+GKV+ +   K H M K+S K +R  + + +L+ AD+ K+ +
Sbjct: 1  MPKMKSKRAAKKRFSITASGKVKYKQMNKGHIMTKKSQKRVRRLKKSAILSEADSMKMRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|209528096|ref|ZP_03276572.1| ribosomal protein L35 [Arthrospira maxima CS-328]
 gi|209491455|gb|EDZ91834.1| ribosomal protein L35 [Arthrospira maxima CS-328]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ +RF +T +GK+  + A K H +  +S    R    T ++   DA+ V R
Sbjct: 1  MPKLKTRKSAARRFKVTGSGKLARRKAFKSHLLQHKSATRKRRLSKTTIVDERDAENV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|94264273|ref|ZP_01288067.1| Ribosomal protein L35 [delta proteobacterium MLMS-1]
 gi|93455318|gb|EAT05525.1| Ribosomal protein L35 [delta proteobacterium MLMS-1]
          Length = 65

 Score = 65.5 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +GKV  + A   H + K+S K  R+ R   ++ +A+   V R
Sbjct: 1  MPKMKTNRGAAKRFKCTGSGKVARRKAFSSHILTKKSTKRKRSLRQGTLVDAANLTGVKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MVPY 64


>gi|218960857|ref|YP_001740632.1| 50S ribosomal protein L35 [Candidatus Cloacamonas
          acidaminovorans]
 gi|167729514|emb|CAO80425.1| 50S ribosomal protein L35 [Candidatus Cloacamonas
          acidaminovorans]
          Length = 80

 Score = 65.5 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+ KRF IT TGK+    A   H   K++ K  R  RG+ ++   D K++ R
Sbjct: 17 MPKLKTNRSAAKRFKITGTGKIVRHHAKSAHIKTKKAPKLKRYLRGSEIVKKPDEKRIYR 76

Query: 61 NY 62
            
Sbjct: 77 ML 78


>gi|257064216|ref|YP_003143888.1| LSU ribosomal protein L35P [Slackia heliotrinireducens DSM 20476]
 gi|256791869|gb|ACV22539.1| LSU ribosomal protein L35P [Slackia heliotrinireducens DSM 20476]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/58 (55%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S SKKRF +T TGK+    A K H   K+S K IRN R    LA+AD K V
Sbjct: 1  MPKMKTHSGSKKRFRVTPTGKIMRGKAYKSHIKTKKSPKRIRNFRKDTELAAADRKVV 58


>gi|285017866|ref|YP_003375577.1| 50s ribosomal protein l35 [Xanthomonas albilineans GPE PC73]
 gi|319786723|ref|YP_004146198.1| ribosomal protein L35 [Pseudoxanthomonas suwonensis 11-1]
 gi|283473084|emb|CBA15589.1| probable 50s ribosomal protein l35 (ribosomal protein a)
          [Xanthomonas albilineans]
 gi|317465235|gb|ADV26967.1| ribosomal protein L35 [Pseudoxanthomonas suwonensis 11-1]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +A  A + H + K++ K  RN R T  + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQTNHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|269126374|ref|YP_003299744.1| 50S ribosomal protein L35 [Thermomonospora curvata DSM 43183]
 gi|268311332|gb|ACY97706.1| ribosomal protein L35 [Thermomonospora curvata DSM 43183]
          Length = 71

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GKV  + A + H +  + +K  R   G +V+A AD K + +
Sbjct: 8  MPKTKTHSGAKKRFKLTGSGKVTRRRANRNHLLEHKPSKRTRRLAGRVVVADADTKMIKK 67

Query: 61 NY 62
            
Sbjct: 68 LL 69


>gi|289449835|ref|YP_003475580.1| 50S ribosomal protein L35 [Clostridiales genomosp. BVAB3 str.
          UPII9-5]
 gi|289184382|gb|ADC90807.1| ribosomal protein L35 [Clostridiales genomosp. BVAB3 str.
          UPII9-5]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+SSSKKRF I+ TGKV    A K+H +  ++ K  RN RG+ + + A+   + +
Sbjct: 1  MPKQKTHSSSKKRFKISGTGKVIRPRAFKKHKLTCKTAKQKRNLRGSTIASPANEANIKK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|302528047|ref|ZP_07280389.1| ribosomal protein L35 [Streptomyces sp. AA4]
 gi|302436942|gb|EFL08758.1| ribosomal protein L35 [Streptomyces sp. AA4]
          Length = 64

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/62 (46%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR  IT +GK+R Q AG+RH M K+SN+  R   GT  +A  D  +V R
Sbjct: 1  MPKMKTHKGTSKRVRITGSGKLRRQKAGRRHLMEKKSNRLTRRLEGTTEVAQNDVSRVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|86131540|ref|ZP_01050138.1| 50S ribosomal protein L35 [Dokdonia donghaensis MED134]
 gi|85817985|gb|EAQ39153.1| 50S ribosomal protein L35 [Dokdonia donghaensis MED134]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K         ++  AD   V 
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHDGLVHEADENNVK 59


>gi|329121026|ref|ZP_08249657.1| ribosomal protein L35 [Dialister micraerophilus DSM 19965]
 gi|327471188|gb|EGF16642.1| ribosomal protein L35 [Dialister micraerophilus DSM 19965]
          Length = 66

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +T +G+++   A + H + K+S K  RN R   +++ AD K++ +
Sbjct: 1  MPKMKTCRSAAKRFKVTGSGQIKRNKAFRSHILEKKSPKRKRNYRKAALISKADYKRIAK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|317403226|gb|EFV83745.1| 50S ribosomal protein L35 [Achromobacter xylosoxidans C54]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V +
Sbjct: 1  MPKMKTKKSAAKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPF 64


>gi|284050290|ref|ZP_06380500.1| 50S ribosomal protein L35 [Arthrospira platensis str. Paraca]
 gi|291571455|dbj|BAI93727.1| 50S ribosomal protein L35 [Arthrospira platensis NIES-39]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ +RF +T +GK+  + A K H +  +S    R    T ++   DA+ V R
Sbjct: 1  MPKLKTRKSAARRFKVTGSGKLARRKAFKSHLLQHKSATRKRRLSKTAIVDERDAENV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|33864594|ref|NP_896153.1| 50S ribosomal protein L35 [Synechococcus sp. WH 8102]
 gi|54036287|sp|Q7UA42|RL35_SYNPX RecName: Full=50S ribosomal protein L35
 gi|33632117|emb|CAE06573.1| 50S ribosomal protein L35 [Synechococcus sp. WH 8102]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  ++ K  R+     V+   D  +V+R
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFTRRRAFRNHLLDHKTPKQKRHLATKAVVHETDELRVVR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|271967365|ref|YP_003341561.1| 50S ribosomal protein L35P [Streptosporangium roseum DSM 43021]
 gi|270510540|gb|ACZ88818.1| 50S ribosomal protein L35P [Streptosporangium roseum DSM 43021]
          Length = 64

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPKMKT+S +KKRF +T TGK++ + A + H    +S+   R  +  +VL+ AD
Sbjct: 1  MPKMKTHSGAKKRFRLTGTGKIKRRRANRAHYNEWKSSTLTRRLKSEVVLSDAD 54


>gi|34496805|ref|NP_901020.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
 gi|54036286|sp|Q7NYC4|RL35_CHRVO RecName: Full=50S ribosomal protein L35
 gi|34102660|gb|AAQ59025.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKR  +   G  +   A KRH + K++ K  R  RGT ++ + +   V R
Sbjct: 1  MPKMKTKSSAKKRLKVLGGGGFKRAHAFKRHILTKKTTKNKRQLRGTSMVDATNVASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|241764280|ref|ZP_04762310.1| ribosomal protein L35 [Acidovorax delafieldii 2AN]
 gi|241366349|gb|EER60879.1| ribosomal protein L35 [Acidovorax delafieldii 2AN]
          Length = 67

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVNVHETNMGSIA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|325475124|gb|EGC78310.1| 50S ribosomal protein L35 [Treponema denticola F0402]
          Length = 66

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 45/66 (68%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  ++KKRFS+TA+GKV+ +   K H M K+S K +R  + + +L+ AD+ K+ +
Sbjct: 1  MPKMKSKRAAKKRFSLTASGKVKYKQMNKGHIMTKKSQKRVRRLKKSAILSEADSMKMRK 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 QLLPYG 66


>gi|32474649|ref|NP_867643.1| 50S ribosomal protein L35 [Rhodopirellula baltica SH 1]
 gi|32445188|emb|CAD75190.1| similar to 50S ribosomal protein L35 [Rhodopirellula baltica SH 1]
          Length = 181

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
           K+KT+  +KKRF ++A GK   + +G  H     S K  RN RGT  +A      +
Sbjct: 117 KIKTHKGTKKRFRLSAKGKAMHRQSGTSHLAKGLSKKRRRNLRGTTAVAECMEPTI 172


>gi|257784328|ref|YP_003179545.1| 50S ribosomal protein L35 [Atopobium parvulum DSM 20469]
 gi|257472835|gb|ACV50954.1| ribosomal protein L35 [Atopobium parvulum DSM 20469]
          Length = 66

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL++ DA  V +
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRGFRKEAVLSAGDAAVVSQ 60

Query: 61 NY 62
            
Sbjct: 61 RM 62


>gi|167763513|ref|ZP_02435640.1| hypothetical protein BACSTE_01887 [Bacteroides stercoris ATCC
          43183]
 gi|167698807|gb|EDS15386.1| hypothetical protein BACSTE_01887 [Bacteroides stercoris ATCC
          43183]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   +  +   +  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKQKRNLCYSTTVDITNMSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|289422393|ref|ZP_06424239.1| ribosomal protein L35 [Peptostreptococcus anaerobius 653-L]
 gi|289157228|gb|EFD05847.1| ribosomal protein L35 [Peptostreptococcus anaerobius 653-L]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +GK++   A K H + K+S K   N R + +++  DAK++  
Sbjct: 1  MPKMKTHRGAAKRLKKTGSGKLKRAKAYKSHILTKKSPKTKMNLRQSTLVSDGDAKRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|326317189|ref|YP_004234861.1| 50S ribosomal protein L35 [Acidovorax avenae subsp. avenae ATCC
          19860]
 gi|323374025|gb|ADX46294.1| ribosomal protein L35 [Acidovorax avenae subsp. avenae ATCC
          19860]
          Length = 67

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVTVHETNMGSIS- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|289208099|ref|YP_003460165.1| ribosomal protein L35 [Thioalkalivibrio sp. K90mix]
 gi|288943730|gb|ADC71429.1| ribosomal protein L35 [Thioalkalivibrio sp. K90mix]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF+ T +GK +   + + H + K+S K  R  R   ++  AD   V R
Sbjct: 1  MPKIKTNRGAAKRFTRTGSGKFKRFQSHRSHILTKKSTKRKRQLRSPAMVHEADVAAV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KMLPY 64


>gi|260219596|emb|CBA26441.1| 50S ribosomal protein L35 [Curvibacter putative symbiont of Hydra
          magnipapillata]
          Length = 94

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R+ RG+  +   +   +  
Sbjct: 28 MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGSAAVHETNMGHMA- 86

Query: 61 NYLP 64
            LP
Sbjct: 87 QMLP 90


>gi|116747874|ref|YP_844561.1| 50S ribosomal protein L35 [Syntrophobacter fumaroxidans MPOB]
 gi|166233045|sp|A0LFC4|RL35_SYNFM RecName: Full=50S ribosomal protein L35
 gi|116696938|gb|ABK16126.1| LSU ribosomal protein L35P [Syntrophobacter fumaroxidans MPOB]
          Length = 65

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  T TGK     A K H + K+S +  R  R    + + +  + + 
Sbjct: 1  MPKMKTNRAAAKRFKRTGTGKFMRARANKSHILTKKSPQRKRRLRQGTAVDAINV-RALE 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 HMLPY 64


>gi|72162464|ref|YP_290121.1| 50S ribosomal protein L35P [Thermobifida fusca YX]
 gi|134039203|sp|Q47N71|RL35_THEFY RecName: Full=50S ribosomal protein L35
 gi|71916196|gb|AAZ56098.1| LSU ribosomal protein L35P [Thermobifida fusca YX]
          Length = 63

 Score = 65.1 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + +RF +T TGK+  +   K H +  + +K  R     + ++ ADA+K+ +
Sbjct: 1  MPKNKSHSGASRRFRVTGTGKIMRRRTNKNHLLEHKPSKRTRRLSVDVRVSPADARKIRK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|71275165|ref|ZP_00651452.1| Ribosomal protein L35 [Xylella fastidiosa Dixon]
 gi|71898246|ref|ZP_00680420.1| Ribosomal protein L35 [Xylella fastidiosa Ann-1]
 gi|170731156|ref|YP_001776589.1| 50S ribosomal protein L35 [Xylella fastidiosa M12]
 gi|226725087|sp|B0U5E1|RL35_XYLFM RecName: Full=50S ribosomal protein L35
 gi|71163974|gb|EAO13689.1| Ribosomal protein L35 [Xylella fastidiosa Dixon]
 gi|71731985|gb|EAO34042.1| Ribosomal protein L35 [Xylella fastidiosa Ann-1]
 gi|167965949|gb|ACA12959.1| 50S ribosomal protein L35 [Xylella fastidiosa M12]
          Length = 65

 Score = 65.1 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA+GK +A  A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKMKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQQNHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|229496100|ref|ZP_04389822.1| ribosomal protein L35 [Porphyromonas endodontalis ATCC 35406]
 gi|229316996|gb|EEN82907.1| ribosomal protein L35 [Porphyromonas endodontalis ATCC 35406]
          Length = 82

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT S +KKRF+IT +GK++ + A K H + K+S K  RN   + ++  A+   V  
Sbjct: 18 MPKQKTVSGAKKRFAITGSGKIKRKHAFKSHILTKKSKKRKRNLTYSGLVEKANVASVRE 77

Query: 61 NY 62
            
Sbjct: 78 ML 79


>gi|225470127|ref|XP_002264584.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 153

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI   
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGA- 142

Query: 63  LPN 65
           LP 
Sbjct: 143 LPY 145


>gi|91787977|ref|YP_548929.1| 50S ribosomal protein L35 [Polaromonas sp. JS666]
 gi|118573017|sp|Q12BR1|RL35_POLSJ RecName: Full=50S ribosomal protein L35
 gi|91697202|gb|ABE44031.1| LSU ribosomal protein L35P [Polaromonas sp. JS666]
          Length = 67

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   +  
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVTVHETNMGHMA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|54036304|sp|Q83GT1|RL35_TROWT RecName: Full=50S ribosomal protein L35
 gi|54036305|sp|Q83HH1|RL35_TROW8 RecName: Full=50S ribosomal protein L35
 gi|28410887|emb|CAD67272.1| 50s ribosomal protein L35 [Tropheryma whipplei TW08/27]
 gi|28476172|gb|AAO44262.1| 50S ribosomal protein L35 [Tropheryma whipplei str. Twist]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PK KT+S +KKRF +T +G V    AG RH    RS++  R   G   ++ AD+K   + 
Sbjct: 3  PKQKTHSGAKKRFKLTGSGSVSRARAGMRHNFEHRSSRVTRRLTGRQFVSDADSKLARKL 62

Query: 62 Y 62
           
Sbjct: 63 L 63


>gi|17230919|ref|NP_487467.1| 50S ribosomal protein L35 [Nostoc sp. PCC 7120]
 gi|75909653|ref|YP_323949.1| 50S ribosomal protein L35 [Anabaena variabilis ATCC 29413]
 gi|20139490|sp|Q8YRL9|RL35_ANASP RecName: Full=50S ribosomal protein L35
 gi|158564310|sp|Q3M7I2|RL35_ANAVT RecName: Full=50S ribosomal protein L35
 gi|17132560|dbj|BAB75126.1| 50S ribosomal protein L35 [Nostoc sp. PCC 7120]
 gi|75703378|gb|ABA23054.1| LSU ribosomal protein L35P [Anabaena variabilis ATCC 29413]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + A K H +  ++    R      ++   D + V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKTTNKKRQFSKMAIVNERDEENV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|296135847|ref|YP_003643089.1| ribosomal protein L35 [Thiomonas intermedia K12]
 gi|295795969|gb|ADG30759.1| ribosomal protein L35 [Thiomonas intermedia K12]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D K++  
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLKQIAA 60

Query: 61 NY 62
            
Sbjct: 61 MM 62


>gi|319763195|ref|YP_004127132.1| ribosomal protein l35 [Alicycliphilus denitrificans BC]
 gi|330825389|ref|YP_004388692.1| 50S ribosomal protein L35 [Alicycliphilus denitrificans K601]
 gi|317117756|gb|ADV00245.1| ribosomal protein L35 [Alicycliphilus denitrificans BC]
 gi|329310761|gb|AEB85176.1| ribosomal protein L35 [Alicycliphilus denitrificans K601]
          Length = 67

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R  RG + +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVAVHETNMGHMA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QMLPF 64


>gi|225013014|ref|ZP_03703430.1| ribosomal protein L35 [Flavobacteria bacterium MS024-2A]
 gi|225002830|gb|EEG40810.1| ribosomal protein L35 [Flavobacteria bacterium MS024-2A]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K       + ++  +D K + +
Sbjct: 1  MPKMKTKSSAKKRFKLTGSGKIKRKHAFKSHILTKKSKKRKLALTHSGLVHESDEKNIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|187478562|ref|YP_786586.1| 50S ribosomal protein L35 [Bordetella avium 197N]
 gi|148887064|sp|Q2KZL7|RL35_BORA1 RecName: Full=50S ribosomal protein L35
 gi|115423148|emb|CAJ49679.1| 50S ribosomal protein L35 [Bordetella avium 197N]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V +
Sbjct: 1  MPKMKTKKSAAKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNIASV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPF 64


>gi|33862329|ref|NP_893889.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9313]
 gi|124021775|ref|YP_001016082.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9303]
 gi|54036290|sp|Q7V998|RL35_PROMM RecName: Full=50S ribosomal protein L35
 gi|166199818|sp|A2C5Q7|RL35_PROM3 RecName: Full=50S ribosomal protein L35
 gi|33640442|emb|CAE20231.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9313]
 gi|123962061|gb|ABM76817.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9303]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   DA+ V R
Sbjct: 1  MPKLKTRKAAAKRFKATVTGKFMRRRAFRNHLLDHKSPKLKRHLATKAVVDERDAENV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|163856955|ref|YP_001631253.1| 50S ribosomal protein L35 [Bordetella petrii DSM 12804]
 gi|226713827|sp|A9IPU4|RL35_BORPD RecName: Full=50S ribosomal protein L35
 gi|163260683|emb|CAP42985.1| 50S ribosomal protein L35 [Bordetella petrii]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V +
Sbjct: 1  MPKMKTKKSASKRFQVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPF 64


>gi|220934624|ref|YP_002513523.1| ribosomal protein L35 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254803581|sp|B8GRI2|RL35_THISH RecName: Full=50S ribosomal protein L35
 gi|219995934|gb|ACL72536.1| ribosomal protein L35 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +G  +   + +RH + K+S K  R+ R T ++A  D   V R
Sbjct: 1  MPKIKTNRGAAKRFKPTGSGGFKRAQSHRRHILTKKSTKRKRHLRSTGMIAECDKASV-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|88800313|ref|ZP_01115879.1| ribosomal protein L35 [Reinekea sp. MED297]
 gi|88776890|gb|EAR08099.1| ribosomal protein L35 [Reinekea sp. MED297]
          Length = 64

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS +KKRF  TA G  + + + + H + K+S+K IR  RG + +A AD K +++
Sbjct: 1  MPKMKSNSGAKKRFKRTANG-FKHKQSFRSHILTKKSSKRIRQLRGMLQVADAD-KPLVK 58

Query: 61 NYLPN 65
            LP 
Sbjct: 59 RMLPY 63


>gi|118573018|sp|Q21YT1|RL35_RHOFD RecName: Full=50S ribosomal protein L35
          Length = 67

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R  RG+  +   D  ++
Sbjct: 1  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTAVHETDMGRM 58


>gi|86610269|ref|YP_479031.1| 50S ribosomal protein L35 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|148887120|sp|Q2JI03|RL35_SYNJB RecName: Full=50S ribosomal protein L35
 gi|86558811|gb|ABD03768.1| ribosomal protein L35 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 66

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK   + AG  H +  +++K  R   G  ++   D   V R
Sbjct: 1  MPKIKTRKAAAKRFRLTGSGKFMRRRAGHNHLLEHKTSKRKRKLAGVALVDKRDVVNV-R 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 LMLPN 64


>gi|332830449|gb|EGK03077.1| 50S ribosomal protein L35 [Dysgonomonas gadei ATCC BAA-286]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 39/63 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS +KKRF++T +GK++ + A K H + K++ K  RN   + ++   D K V +
Sbjct: 1  MPKMKTNSGAKKRFALTGSGKIKRKHAFKSHILTKKTKKQKRNLTHSSLVHKVDEKAVKK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|327402298|ref|YP_004343136.1| 50S ribosomal protein L35P [Fluviicola taffensis DSM 16823]
 gi|327317806|gb|AEA42298.1| LSU ribosomal protein L35P [Fluviicola taffensis DSM 16823]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT SS+KKRF++T +GK++ + A K H + K++ K  RN     ++  AD   V 
Sbjct: 1  MPKMKTTSSAKKRFTVTGSGKIKRKHAFKSHILTKKTKKQKRNLTHAGLVHQADLSNVK 59


>gi|325971719|ref|YP_004247910.1| 50S ribosomal protein L35 [Spirochaeta sp. Buddy]
 gi|324026957|gb|ADY13716.1| 50S ribosomal protein L35 [Spirochaeta sp. Buddy]
          Length = 65

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF +T TGKVR +  G RH + K+S+K   N R   +L   +AK+V +
Sbjct: 1  MPKMKTRRSVAKRFHVTGTGKVRYKKQGLRHILTKKSSKRKGNLRAAGILEDMEAKRV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TMLPY 64


>gi|330836893|ref|YP_004411534.1| 50S ribosomal protein L35P [Spirochaeta coccoides DSM 17374]
 gi|329748796|gb|AEC02152.1| LSU ribosomal protein L35P [Spirochaeta coccoides DSM 17374]
          Length = 65

 Score = 64.7 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KR+ +T +GK+R +  G RH + K+S+K  R  R + +L  ++  +V R
Sbjct: 1  MPKMKTRKAAAKRYKVTGSGKIRYKKQGLRHILTKKSSKRKRQLRASGLLHESEVARV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 VLLPY 64


>gi|302335527|ref|YP_003800734.1| LSU ribosomal protein L35P [Olsenella uli DSM 7084]
 gi|301319367|gb|ADK67854.1| LSU ribosomal protein L35P [Olsenella uli DSM 7084]
          Length = 64

 Score = 64.7 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+    A K H + K+S K IR  R   VL  +DA+ V +
Sbjct: 1  MPKMKTHKGSAKRFRRTGTGKIMRAKAFKSHILTKKSQKRIRAFRKETVLTPSDAQVVSQ 60

Query: 61 NY 62
            
Sbjct: 61 RM 62


>gi|239827995|ref|YP_002950619.1| ribosomal protein L35 [Geobacillus sp. WCH70]
 gi|259647356|sp|C5D637|RL35_GEOSW RecName: Full=50S ribosomal protein L35
 gi|239808288|gb|ACS25353.1| ribosomal protein L35 [Geobacillus sp. WCH70]
          Length = 66

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H    ++ K  R  R   +++  D K++ +
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRGHAYTSHLFANKTQKQKRKLRKATLVSPGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|108761640|ref|YP_631781.1| 50S ribosomal protein L35 [Myxococcus xanthus DK 1622]
 gi|118573015|sp|Q1D6E2|RL35_MYXXD RecName: Full=50S ribosomal protein L35
 gi|108465520|gb|ABF90705.1| ribosomal protein L35 [Myxococcus xanthus DK 1622]
          Length = 68

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI-KRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT SS+KKRF +  +GKV+   A  +H     ++ K  R+ RGT  L   DAKKVI
Sbjct: 1  MPKLKTRSSAKKRFDVKKSGKVKHGKAFAKHLFTFSKTPKSKRSNRGTGHLRDMDAKKVI 60

Query: 60 RNYLPNG 66
          +   P G
Sbjct: 61 KEMFPYG 67


>gi|226227283|ref|YP_002761389.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
 gi|259647409|sp|C1A494|RL35_GEMAT RecName: Full=50S ribosomal protein L35
 gi|226090474|dbj|BAH38919.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 38/63 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRFS+T +GKVR   A K H + K S K  R+ R   ++ +    K I+
Sbjct: 1  MPKMKTHSGAKKRFSVTGSGKVRRLKAYKSHILTKMSGKKKRDLRRPTIVETNGEAKRIK 60

Query: 61 NYL 63
            L
Sbjct: 61 RLL 63


>gi|304436953|ref|ZP_07396916.1| 50S ribosomal protein L35 [Selenomonas sp. oral taxon 149 str.
          67H29BP]
 gi|304369904|gb|EFM23566.1| 50S ribosomal protein L35 [Selenomonas sp. oral taxon 149 str.
          67H29BP]
          Length = 67

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T +G+ R   A KRH + K++ K  RN R   +  ++D K++ R
Sbjct: 3  MPKIKTRRAAAKRFTVTGSGEFRRNKAYKRHILEKKTPKRKRNLRKAALADNSDYKRI-R 61

Query: 61 NYLPN 65
            LP 
Sbjct: 62 KMLPY 66


>gi|301059175|ref|ZP_07200115.1| ribosomal protein L35 [delta proteobacterium NaphS2]
 gi|300446723|gb|EFK10548.1| ribosomal protein L35 [delta proteobacterium NaphS2]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  + +GK+    A   H + K+S K  RN R + VL SA+ K V R
Sbjct: 1  MPKMKTNRGAAKRFKTSGSGKIVRNKAFSSHILTKKSTKRKRNFRKSTVLDSANLKGVKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|300114472|ref|YP_003761047.1| 50S ribosomal protein L35 [Nitrosococcus watsonii C-113]
 gi|299540409|gb|ADJ28726.1| ribosomal protein L35 [Nitrosococcus watsonii C-113]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+GK +   +   H + K+S+K  R  R   V+++AD  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTASGKFKHAQSHHNHILTKKSSKRKRKLRPLAVVSAADGPRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|291287863|ref|YP_003504679.1| 50S ribosomal protein L35 [Denitrovibrio acetiphilus DSM 12809]
 gi|290885023|gb|ADD68723.1| ribosomal protein L35 [Denitrovibrio acetiphilus DSM 12809]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF IT +GKV+A+ +G RH +  +S K  R  R   +L   DA+ V +
Sbjct: 1  MPKMKTHKGSAKRFKITGSGKVKAKKSGLRHILTSKSTKRKRALRHPSILQGKDAQNVKK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MMPY 64


>gi|160900046|ref|YP_001565628.1| 50S ribosomal protein L35 [Delftia acidovorans SPH-1]
 gi|226724993|sp|A9C3D2|RL35_DELAS RecName: Full=50S ribosomal protein L35
 gi|160365630|gb|ABX37243.1| ribosomal protein L35 [Delftia acidovorans SPH-1]
          Length = 67

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVSVHETNMGSIA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|269792336|ref|YP_003317240.1| 50S ribosomal protein L35 [Thermanaerovibrio acidaminovorans DSM
          6589]
 gi|269099971|gb|ACZ18958.1| ribosomal protein L35 [Thermanaerovibrio acidaminovorans DSM
          6589]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRFS+T +GK+  + +G+ H +  ++ K  R  R   VL    A+ + +
Sbjct: 1  MPKVKTHSGAKKRFSVTGSGKLVFKKSGRSHLLECKNAKRRRRLRKQGVLTGTIAENIKK 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MMPY 64


>gi|210632540|ref|ZP_03297450.1| hypothetical protein COLSTE_01353 [Collinsella stercoris DSM
          13279]
 gi|210159487|gb|EEA90458.1| hypothetical protein COLSTE_01353 [Collinsella stercoris DSM
          13279]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S SKKRF  + TGK+    A K H + K+S K  R  R    LA+ADAK +
Sbjct: 1  MPKMKTHSGSKKRFRRSGTGKIMRAKAYKSHILTKKSTKRKRGFRQETELAAADAKVI 58


>gi|256379476|ref|YP_003103136.1| 50S ribosomal protein L35 [Actinosynnema mirum DSM 43827]
 gi|255923779|gb|ACU39290.1| ribosomal protein L35 [Actinosynnema mirum DSM 43827]
          Length = 64

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K++S + KR  +T +GK+  + AGKRH + K+S+K  R   G   +A  D  ++ +
Sbjct: 1  MPKNKSHSGTSKRVKVTGSGKLMREKAGKRHLLEKKSSKLTRRLSGATEVAKNDVPRLKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|237808484|ref|YP_002892924.1| 50S ribosomal protein L35 [Tolumonas auensis DSM 9187]
 gi|259647364|sp|C4LFH1|RL35_TOLAT RecName: Full=50S ribosomal protein L35
 gi|237500745|gb|ACQ93338.1| ribosomal protein L35 [Tolumonas auensis DSM 9187]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +G  + + A KRH + K++ K  R+ R   ++A  D  +V  
Sbjct: 1  MPKMKTDRGAAKRFKKTGSGGFKCKHANKRHILTKKTTKRKRHLRAPGMVAKPDLARVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|238063947|ref|ZP_04608656.1| 50S ribosomal protein L35 [Micromonospora sp. ATCC 39149]
 gi|302866849|ref|YP_003835486.1| 50S ribosomal protein L35 [Micromonospora aurantiaca ATCC 27029]
 gi|315503264|ref|YP_004082151.1| ribosomal protein l35 [Micromonospora sp. L5]
 gi|237885758|gb|EEP74586.1| 50S ribosomal protein L35 [Micromonospora sp. ATCC 39149]
 gi|302569708|gb|ADL45910.1| ribosomal protein L35 [Micromonospora aurantiaca ATCC 27029]
 gi|315409883|gb|ADU08000.1| ribosomal protein L35 [Micromonospora sp. L5]
          Length = 64

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+++   KR  +T  GK+ AQ AG RH + K+ +   R   GT+ LA AD K++ +
Sbjct: 1  MPKMKSHTGMGKRVKVTGKGKIVAQQAGLRHNLEKKPSTQTRRLTGTVELAKADTKRIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|84496737|ref|ZP_00995591.1| ribosomal protein L35 [Janibacter sp. HTCC2649]
 gi|84383505|gb|EAP99386.1| ribosomal protein L35 [Janibacter sp. HTCC2649]
          Length = 64

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GKV  + AG  H   +++ +  R     ++++ AD KKV +
Sbjct: 1  MPKNKTHSGTKKRFRVTGSGKVMREQAGHVHKFHEKTPQKARALSKDVLVSKADVKKVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|294340012|emb|CAZ88376.1| 50S ribosomal subunit protein L35 [Thiomonas sp. 3As]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D K++  
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATGVHDSDLKQIAA 60

Query: 61 NY 62
            
Sbjct: 61 MM 62


>gi|292493205|ref|YP_003528644.1| ribosomal protein L35 [Nitrosococcus halophilus Nc4]
 gi|291581800|gb|ADE16257.1| ribosomal protein L35 [Nitrosococcus halophilus Nc4]
          Length = 65

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TATGK +   +   H + K+S+K  RN R   ++ ++D  ++ R
Sbjct: 1  MPKLKTNRGAAKRFKRTATGKFKRAQSHHNHILTKKSSKRKRNLRPLAMVKASDGPRLNR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|254796600|ref|YP_003081436.1| hypothetical protein NRI_0206 [Neorickettsia risticii str.
          Illinois]
 gi|254589835|gb|ACT69197.1| conserved domain protein [Neorickettsia risticii str. Illinois]
          Length = 83

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G  +++ +   +++R
Sbjct: 18 MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGYTLISKS-KMRLMR 76

Query: 61 NYLPN 65
          + +P 
Sbjct: 77 SVMPY 81


>gi|311747149|ref|ZP_07720934.1| ribosomal protein L35 [Algoriphagus sp. PR1]
 gi|126578858|gb|EAZ83022.1| ribosomal protein L35 [Algoriphagus sp. PR1]
          Length = 64

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT SS+KKRF++T TGK++ + A K H + K++ K   N   T ++  +D  +V 
Sbjct: 1  MPKVKTKSSAKKRFALTGTGKIKRKHAFKSHILTKKATKRKNNLTKTGLVHESDEGRVR 59


>gi|158321004|ref|YP_001513511.1| ribosomal protein L35 [Alkaliphilus oremlandii OhILAs]
 gi|166988030|sp|A8MI83|RL35_ALKOO RecName: Full=50S ribosomal protein L35
 gi|158141203|gb|ABW19515.1| ribosomal protein L35 [Alkaliphilus oremlandii OhILAs]
          Length = 64

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H + K+S K  R  R   ++   D +++  
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIKRSKAYTSHILTKKSPKRKRKLRKAGIVFKGDQRRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|295399482|ref|ZP_06809464.1| ribosomal protein L35 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109959|ref|YP_003988275.1| ribosomal protein L35 [Geobacillus sp. Y4.1MC1]
 gi|294978948|gb|EFG54544.1| ribosomal protein L35 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215060|gb|ADP73664.1| ribosomal protein L35 [Geobacillus sp. Y4.1MC1]
          Length = 66

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H    ++ K  R  R   +++  D K++ +
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRGHAYTSHLFASKTQKQKRKLRKATLVSPGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|304310700|ref|YP_003810298.1| 50S ribosomal protein L35 [gamma proteobacterium HdN1]
 gi|301796433|emb|CBL44641.1| 50S ribosomal protein L35 [gamma proteobacterium HdN1]
          Length = 64

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA G  + + A KRH + K+S K IR  R   ++  +D   V R
Sbjct: 1  MPKIKTNRGAAKRFRKTANG-FKRKQAFKRHILTKKSPKRIRQLRPMSMVHPSDVALVQR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|229816630|ref|ZP_04446919.1| hypothetical protein COLINT_03678 [Collinsella intestinalis DSM
          13280]
 gi|229807758|gb|EEP43571.1| hypothetical protein COLINT_03678 [Collinsella intestinalis DSM
          13280]
          Length = 65

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S SKKRF  + TGK+    A K H + K+S K  R  R    LA+ADAK +
Sbjct: 1  MPKMKTHSGSKKRFRRSGTGKIMRAKAYKSHILTKKSTKRKRGFRQEAELAAADAKVI 58


>gi|114566618|ref|YP_753772.1| 50S ribosomal protein L35 [Syntrophomonas wolfei subsp. wolfei
          str. Goettingen]
 gi|122318331|sp|Q0AY03|RL35_SYNWW RecName: Full=50S ribosomal protein L35
 gi|114337553|gb|ABI68401.1| LSU ribosomal protein L35P [Syntrophomonas wolfei subsp. wolfei
          str. Goettingen]
          Length = 64

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TGK++   A   H +  +S K  RN R   +++ A+ + + R
Sbjct: 1  MPKIKTHRGAAKRFKKTGTGKIKRSKAYASHLLGGKSPKRKRNLRKAGLVSEAETRGISR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|121605745|ref|YP_983074.1| 50S ribosomal protein L35 [Polaromonas naphthalenivorans CJ2]
 gi|166199815|sp|A1VR75|RL35_POLNA RecName: Full=50S ribosomal protein L35
 gi|120594714|gb|ABM38153.1| LSU ribosomal protein L35P [Polaromonas naphthalenivorans CJ2]
          Length = 67

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF +   G V+   A KRH + K++ K  R  RG++ +   +   +  
Sbjct: 1  MPKMKTKSGAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSVAVHETNMGHMA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|262369838|ref|ZP_06063165.1| ribosomal protein L35 [Acinetobacter johnsonii SH046]
 gi|262374871|ref|ZP_06068105.1| ribosomal protein L35 [Acinetobacter lwoffii SH145]
 gi|262309884|gb|EEY91013.1| ribosomal protein L35 [Acinetobacter lwoffii SH145]
 gi|262314877|gb|EEY95917.1| ribosomal protein L35 [Acinetobacter johnsonii SH046]
          Length = 64

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF  TA G  + + A KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MPKMKTRRGAAKRFKATANG-FKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDVASVRR 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 -MCPY 63


>gi|33593559|ref|NP_881203.1| 50S ribosomal protein L35 [Bordetella pertussis Tohama I]
 gi|33597177|ref|NP_884820.1| 50S ribosomal protein L35 [Bordetella parapertussis 12822]
 gi|33601021|ref|NP_888581.1| 50S ribosomal protein L35 [Bordetella bronchiseptica RB50]
 gi|54036295|sp|Q7VVR2|RL35_BORPE RecName: Full=50S ribosomal protein L35
 gi|54036296|sp|Q7W7C9|RL35_BORPA RecName: Full=50S ribosomal protein L35
 gi|54036297|sp|Q7WKR7|RL35_BORBR RecName: Full=50S ribosomal protein L35
 gi|33572915|emb|CAE42851.1| 50s ribosomal protein l35 [Bordetella pertussis Tohama I]
 gi|33573604|emb|CAE37888.1| 50s ribosomal protein l35 [Bordetella parapertussis]
 gi|33575456|emb|CAE32534.1| 50s ribosomal protein l35 [Bordetella bronchiseptica RB50]
 gi|332382966|gb|AEE67813.1| 50S ribosomal protein L35 [Bordetella pertussis CS]
          Length = 65

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +   +   V +
Sbjct: 1  MPKMKTKKSAAKRFKVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSAAVHETNVASV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPF 64


>gi|292670654|ref|ZP_06604080.1| 50S ribosomal protein L35 [Selenomonas noxia ATCC 43541]
 gi|292647681|gb|EFF65653.1| 50S ribosomal protein L35 [Selenomonas noxia ATCC 43541]
          Length = 65

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS+T +G+ R   A KRH + K++ K  RN R   +  ++D K++ R
Sbjct: 1  MPKIKTRRAAAKRFSVTGSGEFRRNKAYKRHILEKKTPKRKRNLRKAALADTSDYKRI-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KMLPY 64


>gi|15837341|ref|NP_298029.1| 50S ribosomal protein L35 [Xylella fastidiosa 9a5c]
 gi|28199781|ref|NP_780095.1| 50S ribosomal protein L35 [Xylella fastidiosa Temecula1]
 gi|182682531|ref|YP_001830691.1| 50S ribosomal protein L35 [Xylella fastidiosa M23]
 gi|54039211|sp|P66285|RL35_XYLFT RecName: Full=50S ribosomal protein L35
 gi|54041907|sp|P66284|RL35_XYLFA RecName: Full=50S ribosomal protein L35
 gi|226725086|sp|B2I9P6|RL35_XYLF2 RecName: Full=50S ribosomal protein L35
 gi|9105629|gb|AAF83549.1|AE003916_3 50S ribosomal protein L35 [Xylella fastidiosa 9a5c]
 gi|28057902|gb|AAO29744.1| 50S ribosomal protein L35 [Xylella fastidiosa Temecula1]
 gi|182632641|gb|ACB93417.1| ribosomal protein L35 [Xylella fastidiosa M23]
 gi|307578809|gb|ADN62778.1| 50S ribosomal protein L35 [Xylella fastidiosa subsp. fastidiosa
          GB514]
          Length = 65

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TA+GK +A  A + H + K++ K  RN R    + + DA ++ R
Sbjct: 1  MPKIKTNRAAAKRFRKTASGKYKAGHANRSHILTKKATKRKRNLRQQNHVRAEDAGRLDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|121610035|ref|YP_997842.1| 50S ribosomal protein L35 [Verminephrobacter eiseniae EF01-2]
 gi|166233049|sp|A1WMG7|RL35_VEREI RecName: Full=50S ribosomal protein L35
 gi|121554675|gb|ABM58824.1| LSU ribosomal protein L35P [Verminephrobacter eiseniae EF01-2]
          Length = 67

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K + +  R+ RGT+ +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKMTTRNKRHLRGTVAVHETNMGSMA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|332292752|ref|YP_004431361.1| ribosomal protein L35 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170838|gb|AEE20093.1| ribosomal protein L35 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 65

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K         ++  AD   V 
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHDGLVHDADTSNVK 59


>gi|284991465|ref|YP_003410019.1| 50S ribosomal protein L35 [Geodermatophilus obscurus DSM 43160]
 gi|284064710|gb|ADB75648.1| ribosomal protein L35 [Geodermatophilus obscurus DSM 43160]
          Length = 64

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KR  +T +GK+  + A  +H    +S++  R      V++ AD K + +
Sbjct: 1  MPKQKTHKGTAKRVRVTGSGKLMREQANNQHKFEHKSSRRKRRLDQDQVISPADTKSLKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|326391474|ref|ZP_08213009.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus JW 200]
 gi|325992500|gb|EGD50957.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus JW 200]
          Length = 65

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L  ADAK + R
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSRAYKSHLLTHKNAKRKRRLRKATYLIGADAKNIKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|225470652|ref|XP_002267813.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147785813|emb|CAN77631.1| hypothetical protein VITISV_001803 [Vitis vinifera]
 gi|147799145|emb|CAN63703.1| hypothetical protein VITISV_039205 [Vitis vinifera]
          Length = 153

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI   
Sbjct: 84  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGA- 142

Query: 63  LPN 65
           LP 
Sbjct: 143 LPY 145


>gi|224826512|ref|ZP_03699613.1| ribosomal protein L35 [Lutiella nitroferrum 2002]
 gi|224601113|gb|EEG07295.1| ribosomal protein L35 [Lutiella nitroferrum 2002]
          Length = 65

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKR ++   G V+   A KRH + K++ K  R  RGT ++ +++   V R
Sbjct: 1  MPKMKTKSSAKKRLNVLGGGGVKRSMAFKRHILTKKTTKNKRQLRGTTMVDASNMASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|52307162|gb|AAU37662.1| RpmI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 77

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+ 
Sbjct: 13 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVA 72

Query: 61 NYLPN 65
            LP 
Sbjct: 73 C-LPY 76


>gi|167037185|ref|YP_001664763.1| 50S ribosomal protein L35 [Thermoanaerobacter pseudethanolicus
          ATCC 33223]
 gi|307267646|ref|ZP_07549108.1| ribosomal protein L35 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|320115603|ref|YP_004185762.1| 50S ribosomal protein L35 [Thermoanaerobacter brockii subsp.
          finnii Ako-1]
 gi|226725076|sp|B0K8B4|RL35_THEP3 RecName: Full=50S ribosomal protein L35
 gi|166856019|gb|ABY94427.1| ribosomal protein L35 [Thermoanaerobacter pseudethanolicus ATCC
          33223]
 gi|306917335|gb|EFN47647.1| ribosomal protein L35 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|319928694|gb|ADV79379.1| ribosomal protein L35 [Thermoanaerobacter brockii subsp. finnii
          Ako-1]
          Length = 65

 Score = 63.9 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L  ADAK + R
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSRAYKSHLLTHKNAKRKRRLRKATYLVGADAKNIKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|218779646|ref|YP_002430964.1| 50S ribosomal protein L35 [Desulfatibacillum alkenivorans AK-01]
 gi|226724994|sp|B8FFU1|RL35_DESAA RecName: Full=50S ribosomal protein L35
 gi|218761030|gb|ACL03496.1| ribosomal protein L35 [Desulfatibacillum alkenivorans AK-01]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T +GKV+   +   H + K+S K  R+ R + +L  A+ K + R
Sbjct: 1  MPKIKTNRAAAKRFKKTGSGKVKYSKSFGSHILAKKSRKRKRDLRQSHILDEANMKNIKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|295395437|ref|ZP_06805636.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971759|gb|EFG47635.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 68

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKR  +T +GK+  +  G RH    +S+K  R      VLA  DA K  +
Sbjct: 1  MPKMKTHSGTKKRVRVTGSGKIMREGVGNRHLAEHKSSKRKRQISQDQVLAPGDAAKAKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|288574761|ref|ZP_06393118.1| ribosomal protein L35 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570502|gb|EFC92059.1| ribosomal protein L35 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRFS T TGKV  + +G+ H +  ++ + +R  R   +L      + ++
Sbjct: 1  MPKMKTHSGAKKRFSFTGTGKVSYKKSGRAHILRTKNARRLRRLRQDGILNDT-LTETMK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KMMPY 64


>gi|315649037|ref|ZP_07902131.1| ribosomal protein L35 [Paenibacillus vortex V453]
 gi|315275718|gb|EFU39072.1| ribosomal protein L35 [Paenibacillus vortex V453]
          Length = 66

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV+   A K H +  +S +  R    + ++A  D K++ +
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVKRYKAYKNHLLSHKSKRAKRVLSNSPIMAPGDVKRLKQ 60

Query: 61 NYL 63
             
Sbjct: 61 GLA 63


>gi|56750283|ref|YP_170984.1| 50S ribosomal protein L35 [Synechococcus elongatus PCC 6301]
 gi|81300087|ref|YP_400295.1| 50S ribosomal protein L35 [Synechococcus elongatus PCC 7942]
 gi|81676965|sp|Q5N5F4|RL35_SYNP6 RecName: Full=50S ribosomal protein L35
 gi|148887121|sp|Q31NR1|RL35_SYNE7 RecName: Full=50S ribosomal protein L35
 gi|56685242|dbj|BAD78464.1| 50S ribosomal protein L35 [Synechococcus elongatus PCC 6301]
 gi|81168968|gb|ABB57308.1| LSU ribosomal protein L35P [Synechococcus elongatus PCC 7942]
          Length = 66

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF I+  GK   + A K H +  ++    R      V+   D ++V +
Sbjct: 1  MPKLKTRKAAAKRFRISGNGKAIRRKAFKNHLLQHKNATRRRRLSQPEVVHETDQERV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|293604702|ref|ZP_06687102.1| 50S ribosomal protein L35 [Achromobacter piechaudii ATCC 43553]
 gi|311105457|ref|YP_003978310.1| 50S ribosomal protein L35 [Achromobacter xylosoxidans A8]
 gi|292816871|gb|EFF75952.1| 50S ribosomal protein L35 [Achromobacter piechaudii ATCC 43553]
 gi|310760146|gb|ADP15595.1| ribosomal protein L35 [Achromobacter xylosoxidans A8]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +  +G ++   A KRH + K++ K  R  RG+  +  ++   V +
Sbjct: 1  MPKMKTKKSASKRFKVRGSGSIKRGQAFKRHILTKKTTKAKRQLRGSTAVHESNVASV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPF 64


>gi|261408923|ref|YP_003245164.1| 50S ribosomal protein L35 [Paenibacillus sp. Y412MC10]
 gi|329922256|ref|ZP_08277958.1| ribosomal protein L35 [Paenibacillus sp. HGF5]
 gi|261285386|gb|ACX67357.1| ribosomal protein L35 [Paenibacillus sp. Y412MC10]
 gi|328942293|gb|EGG38563.1| ribosomal protein L35 [Paenibacillus sp. HGF5]
          Length = 66

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV+   A K H +  +S +  R    + V+A  D K++ +
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVKRYKAYKNHLLSHKSKRAKRVLSNSPVMAPGDVKRLKQ 60

Query: 61 NYL 63
             
Sbjct: 61 GLA 63


>gi|297182198|gb|ADI18369.1| hypothetical protein [uncultured actinobacterium HF4000_04C13]
          Length = 64

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR  +T +GK++ + A   H + K+S K  R       +  A+A  V R
Sbjct: 1  MPKMKTHRGAAKRIKVTGSGKLKRRNANLSHILEKKSPKRKRRLARQSSVHPANAPAVRR 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|313674624|ref|YP_004052620.1| LSU ribosomal protein l35p [Marivirga tractuosa DSM 4126]
 gi|312941322|gb|ADR20512.1| LSU ribosomal protein L35P [Marivirga tractuosa DSM 4126]
          Length = 64

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT S +KKRF +T +GK++ + A K H + K+  K  R      ++  +D  +V 
Sbjct: 1  MPKVKTKSGAKKRFKLTGSGKIKRKHAYKSHILTKKETKQKRRLTDMGLVHKSDVGRVK 59


>gi|210623617|ref|ZP_03293943.1| hypothetical protein CLOHIR_01893 [Clostridium hiranonis DSM
          13275]
 gi|210153487|gb|EEA84493.1| hypothetical protein CLOHIR_01893 [Clostridium hiranonis DSM
          13275]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T  GK++   A K H + K+S K   N R + +++  DA+++  
Sbjct: 1  MPKMKTHRGAAKRLKRTGNGKLKRAKAYKSHILTKKSAKTKMNLRQSTLVSEGDARRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|302342265|ref|YP_003806794.1| ribosomal protein L35 [Desulfarculus baarsii DSM 2075]
 gi|301638878|gb|ADK84200.1| ribosomal protein L35 [Desulfarculus baarsii DSM 2075]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF +T +G+++   A K H + K++ K +RN R + ++  ++   V R
Sbjct: 1  MPKIKTNRAAAKRFRVTGSGRIKRSKANKSHILTKKNTKRLRNLRKSDLVDRSNMAGVRR 60

Query: 61 NYLPN 65
            LPN
Sbjct: 61 -LLPN 64


>gi|194476904|ref|YP_002049083.1| 50S ribosomal protein L35 [Paulinella chromatophora]
 gi|171191911|gb|ACB42873.1| 50S ribosomal protein L35 [Paulinella chromatophora]
          Length = 65

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T +GK   + A + H +  +S K  R      ++   D + V  
Sbjct: 1  MPKLKTRKAAAKRFQATGSGKFVRRHAFRSHLLDHKSPKRRRYLATMALVDERDMRNVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|283778176|ref|YP_003368931.1| 50S ribosomal protein L35 [Pirellula staleyi DSM 6068]
 gi|283436629|gb|ADB15071.1| ribosomal protein L35 [Pirellula staleyi DSM 6068]
          Length = 67

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 41/67 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKRF +TA GK++ +AAG  H   +RS K  RN RGT VL +  + +++ 
Sbjct: 1  MPKMKTHKGTKKRFRLTARGKIKHRAAGTSHLATRRSKKRRRNLRGTRVLETTMSHQIVA 60

Query: 61 NYLPNGI 67
                +
Sbjct: 61 ALGAYSL 67


>gi|313887204|ref|ZP_07820900.1| ribosomal protein L35 [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923433|gb|EFR34246.1| ribosomal protein L35 [Porphyromonas asaccharolytica PR426713P-I]
          Length = 64

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT S +KKRF +T +G+++ + A K H + K+S K  RN   T ++   + K V  
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRIKRKHAYKSHILTKKSKKRKRNLTYTALVDPHNEKSVKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|239814878|ref|YP_002943788.1| ribosomal protein L35 [Variovorax paradoxus S110]
 gi|319794589|ref|YP_004156229.1| ribosomal protein l35 [Variovorax paradoxus EPS]
 gi|259647365|sp|C5CUU4|RL35_VARPS RecName: Full=50S ribosomal protein L35
 gi|239801455|gb|ACS18522.1| ribosomal protein L35 [Variovorax paradoxus S110]
 gi|315597052|gb|ADU38118.1| ribosomal protein L35 [Variovorax paradoxus EPS]
          Length = 67

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   V
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVAVHETNMVSV 58


>gi|186685030|ref|YP_001868226.1| 50S ribosomal protein L35 [Nostoc punctiforme PCC 73102]
 gi|226725040|sp|B2J0D1|RL35_NOSP7 RecName: Full=50S ribosomal protein L35
 gi|186467482|gb|ACC83283.1| ribosomal protein L35 [Nostoc punctiforme PCC 73102]
          Length = 65

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+  + AGK H +  +S+   R+   T ++   D   V R
Sbjct: 1  MPKLKTRKAAAKRFRATGTGKIVRRKAGKSHLLEHKSSDKKRSMSKTTLVHERDELNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|238927110|ref|ZP_04658870.1| ribosomal protein L35 [Selenomonas flueggei ATCC 43531]
 gi|238885090|gb|EEQ48728.1| ribosomal protein L35 [Selenomonas flueggei ATCC 43531]
          Length = 67

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF++T  G+ R   A KRH + K++ K  RN R   +  S+D K++ R
Sbjct: 3  MPKIKTRRAAAKRFTVTGGGEFRRNKAYKRHILEKKTPKRKRNLRKAALADSSDYKRI-R 61

Query: 61 NYLPN 65
            LP 
Sbjct: 62 KMLPY 66


>gi|120611521|ref|YP_971199.1| 50S ribosomal protein L35 [Acidovorax citrulli AAC00-1]
 gi|166231144|sp|A1TR37|RL35_ACIAC RecName: Full=50S ribosomal protein L35
 gi|120589985|gb|ABM33425.1| LSU ribosomal protein L35P [Acidovorax citrulli AAC00-1]
          Length = 67

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +   G V+   A KRH + K++ K  R+ RG + +   +   +  
Sbjct: 1  MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVSVHETNMGHMA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QMLPF 64


>gi|74317027|ref|YP_314767.1| 50S ribosomal protein L35P [Thiobacillus denitrificans ATCC
          25259]
 gi|148887125|sp|Q3SK32|RL35_THIDA RecName: Full=50S ribosomal protein L35
 gi|74056522|gb|AAZ96962.1| ribosomal protein L35 [Thiobacillus denitrificans ATCC 25259]
          Length = 65

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S + KRF     G  +   A  RH + K+S K  R  RG   + +++ K V R
Sbjct: 1  MPKMKSKSGAAKRFRALGGGGFKRSHAFMRHILTKKSTKRKRQLRGMETVNASNHKAVAR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|284045072|ref|YP_003395412.1| ribosomal protein L35 [Conexibacter woesei DSM 14684]
 gi|283949293|gb|ADB52037.1| ribosomal protein L35 [Conexibacter woesei DSM 14684]
          Length = 66

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF ++A GKVR + A   H + K+S K  R       ++  DA +V +
Sbjct: 1  MPKMKTHSGAKKRFKVSAKGKVRGRHAFTSHILEKKSPKRKRRLGRPAQISDHDAPRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|229543585|ref|ZP_04432645.1| ribosomal protein L35 [Bacillus coagulans 36D1]
 gi|229328005|gb|EEN93680.1| ribosomal protein L35 [Bacillus coagulans 36D1]
          Length = 65

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +G ++   A + H    +  K  R  R + +++ +D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGSLKRSHAYRSHLFANKVTKQKRQLRKSTLVSESDMKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|253682638|ref|ZP_04863435.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
 gi|331269138|ref|YP_004395630.1| 50S ribosomal protein L35 [Clostridium botulinum BKT015925]
 gi|253562350|gb|EES91802.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
 gi|329125688|gb|AEB75633.1| ribosomal protein L35 [Clostridium botulinum BKT015925]
          Length = 65

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  +KV++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEA-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|330752455|emb|CBL87405.1| ribosomal protein L35 [uncultured Flavobacteria bacterium]
          Length = 65

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K       + ++  +D   + +
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKKRKLALTHSTLVHESDEANIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|228469285|ref|ZP_04054311.1| ribosomal protein L35 [Porphyromonas uenonis 60-3]
 gi|228309184|gb|EEK17786.1| ribosomal protein L35 [Porphyromonas uenonis 60-3]
          Length = 64

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT S +KKRF +T +G+V+ + A K H + K+S K  RN   T ++   +   V  
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRVKRKHAYKSHILTKKSKKRKRNLTYTALVHPHNEHSVKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|294508834|ref|YP_003572893.1| 50S ribosomal protein L35 [Salinibacter ruber M8]
 gi|294345163|emb|CBH25941.1| 50S ribosomal protein L35 [Salinibacter ruber M8]
          Length = 78

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+     +  I 
Sbjct: 14 MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVVDDKANRDRIE 73

Query: 61 NYL 63
            L
Sbjct: 74 RML 76


>gi|118443181|ref|YP_877835.1| 50S ribosomal protein L35 [Clostridium novyi NT]
 gi|166231179|sp|A0PZN3|RL35_CLONN RecName: Full=50S ribosomal protein L35
 gi|118133637|gb|ABK60681.1| ribosomal protein L35 [Clostridium novyi NT]
          Length = 65

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  +KV++
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEA-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|257069326|ref|YP_003155581.1| 50S ribosomal protein L35P [Brachybacterium faecium DSM 4810]
 gi|256560144|gb|ACU85991.1| LSU ribosomal protein L35P [Brachybacterium faecium DSM 4810]
          Length = 64

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKR  +T +GK+  + A  RH +  +S+   R       +A AD K++ +
Sbjct: 1  MPKNKTHSGTKKRVRVTGSGKLMREQANARHLLEHKSSTRKRRLGSDTDVAKADVKRMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|149926879|ref|ZP_01915138.1| ribosomal protein L35 [Limnobacter sp. MED105]
 gi|149824431|gb|EDM83649.1| ribosomal protein L35 [Limnobacter sp. MED105]
          Length = 65

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF + ++G ++   A KRH + K++ K  R  RG   +  +D  +V R
Sbjct: 1  MPKMKTKKSASKRFLVRSSGSIKRGHAFKRHILTKKTTKSKRQLRGMETIHKSDIGRV-R 59

Query: 61 NYLPN 65
          + +P 
Sbjct: 60 DMMPY 64


>gi|167040676|ref|YP_001663661.1| 50S ribosomal protein L35 [Thermoanaerobacter sp. X514]
 gi|256751283|ref|ZP_05492163.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289578711|ref|YP_003477338.1| ribosomal protein L35 [Thermoanaerobacter italicus Ab9]
 gi|297544945|ref|YP_003677247.1| 50S ribosomal protein L35 [Thermoanaerobacter mathranii subsp.
          mathranii str. A3]
 gi|300914717|ref|ZP_07132033.1| ribosomal protein L35 [Thermoanaerobacter sp. X561]
 gi|307724049|ref|YP_003903800.1| 50S ribosomal protein L35 [Thermoanaerobacter sp. X513]
 gi|226725077|sp|B0K3V4|RL35_THEPX RecName: Full=50S ribosomal protein L35
 gi|166854916|gb|ABY93325.1| ribosomal protein L35 [Thermoanaerobacter sp. X514]
 gi|256749838|gb|EEU62862.1| ribosomal protein L35 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289528424|gb|ADD02776.1| ribosomal protein L35 [Thermoanaerobacter italicus Ab9]
 gi|296842720|gb|ADH61236.1| ribosomal protein L35 [Thermoanaerobacter mathranii subsp.
          mathranii str. A3]
 gi|300889652|gb|EFK84798.1| ribosomal protein L35 [Thermoanaerobacter sp. X561]
 gi|307581110|gb|ADN54509.1| ribosomal protein L35 [Thermoanaerobacter sp. X513]
          Length = 65

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +  +GKV+   A K H +  ++ K  R  R    L   DAK + R
Sbjct: 1  MPKMKTHRGAAKRFKVLKSGKVKRSKAYKSHLLTHKNAKRKRRLRKATYLVGGDAKNIRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|124267075|ref|YP_001021079.1| 50S ribosomal protein L35P [Methylibium petroleiphilum PM1]
 gi|166231196|sp|A2SH05|RL35_METPP RecName: Full=50S ribosomal protein L35
 gi|124259850|gb|ABM94844.1| LSU ribosomal protein L35P [Methylibium petroleiphilum PM1]
          Length = 67

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +   G V+   A KRH + K+S K  R+ RGT  +   +   +  
Sbjct: 1  MPKMKTKKSAAKRFRVRPGGTVKRGQAFKRHILTKKSTKNKRHLRGTATVHETNMGHMA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QMLPF 64


>gi|311742379|ref|ZP_07716188.1| 50S ribosomal protein L35 [Aeromicrobium marinum DSM 15272]
 gi|311314007|gb|EFQ83915.1| 50S ribosomal protein L35 [Aeromicrobium marinum DSM 15272]
          Length = 64

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K +S  KKR  +T +GK+R +   +RH +  +S+   R   GT  ++ AD KKV +
Sbjct: 1  MPKFKPHSGMKKRVKLTGSGKLRREQTNRRHLLEHKSSSRTRRLEGTTDVSKADTKKVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|18310875|ref|NP_562809.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
 gi|110801128|ref|YP_696573.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
 gi|110803127|ref|YP_699171.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
 gi|168206056|ref|ZP_02632061.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
 gi|168215519|ref|ZP_02641144.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
 gi|169343773|ref|ZP_02864772.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
 gi|182626131|ref|ZP_02953891.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
 gi|20139453|sp|Q8XJ68|RL35_CLOPE RecName: Full=50S ribosomal protein L35
 gi|118573002|sp|Q0TP67|RL35_CLOP1 RecName: Full=50S ribosomal protein L35
 gi|118573003|sp|Q0SRT6|RL35_CLOPS RecName: Full=50S ribosomal protein L35
 gi|18145557|dbj|BAB81599.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
 gi|110675775|gb|ABG84762.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
 gi|110683628|gb|ABG86998.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
 gi|169298333|gb|EDS80423.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
 gi|170662412|gb|EDT15095.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
 gi|177908568|gb|EDT71093.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
 gi|182382218|gb|EDT79697.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
          Length = 65

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A   H + K+S K  RN R T  +++A  +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAHAFTSHILTKKSAKRKRNLRKTGYVSTA-QEKAMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|291533296|emb|CBL06409.1| LSU ribosomal protein L35P [Megamonas hypermegale ART12/1]
          Length = 65

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF+ T +G+ +   A K H + K+S K  RN R   ++ +AD K+V +
Sbjct: 1  MPKIKTRRAAAKRFTATGSGEFKRNKAFKSHILEKKSPKRKRNLRKAAIITAADHKRVSK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|297571533|ref|YP_003697307.1| ribosomal protein L35 [Arcanobacterium haemolyticum DSM 20595]
 gi|296931880|gb|ADH92688.1| ribosomal protein L35 [Arcanobacterium haemolyticum DSM 20595]
          Length = 64

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+S +KKRF  T +GK+  + AGKRH +  +S++  R       +A AD K+V 
Sbjct: 1  MPKMKTHSGAKKRFRKTGSGKLMREQAGKRHLLEHKSSRRTRRLSSDQPVARADVKQVK 59


>gi|291519541|emb|CBK74762.1| LSU ribosomal protein L35P [Butyrivibrio fibrisolvens 16/4]
          Length = 65

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K + +
Sbjct: 1  MPKMKTRRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRHATIVDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|302339089|ref|YP_003804295.1| ribosomal protein L35 [Spirochaeta smaragdinae DSM 11293]
 gi|301636274|gb|ADK81701.1| ribosomal protein L35 [Spirochaeta smaragdinae DSM 11293]
          Length = 66

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KR+S+T +GKV+ +  G RH + K+S K  RN R   VL+ A+ +K  +
Sbjct: 1  MPKMKTRKSAAKRYSVTGSGKVKYKKQGLRHILTKKSTKRKRNLRHAGVLSKAETEK-AK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 GLLPY 64


>gi|291300539|ref|YP_003511817.1| 50S ribosomal protein L35 [Stackebrandtia nassauensis DSM 44728]
 gi|290569759|gb|ADD42724.1| ribosomal protein L35 [Stackebrandtia nassauensis DSM 44728]
          Length = 64

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S  +KR  IT TGK+R Q A +RH +  +S++  R   G +  A AD KKV R
Sbjct: 1  MPKMKSHSGMRKRVKITGTGKLRRQRANRRHYLEHKSSRLTRRLDGRVDFAKADVKKVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|313905724|ref|ZP_07839084.1| ribosomal protein L35 [Eubacterium cellulosolvens 6]
 gi|313469431|gb|EFR64773.1| ribosomal protein L35 [Eubacterium cellulosolvens 6]
          Length = 65

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++ KRF  T TGK+    A K H + K++ K  RN R   VL   + +++ R
Sbjct: 1  MPKMKTRSAAAKRFKTTGTGKIVRHKAYKSHILTKKTTKRKRNLRKATVLDQTNNRQMKR 60

Query: 61 NY 62
            
Sbjct: 61 CL 62


>gi|260424666|ref|ZP_05732873.2| ribosomal protein L35 [Dialister invisus DSM 15470]
 gi|260402755|gb|EEW96302.1| ribosomal protein L35 [Dialister invisus DSM 15470]
          Length = 67

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF+ T +G+ +   A K H + K+S K  RN R   +++ +D K+V R
Sbjct: 3  MPKMKTRRAAAKRFTETGSGQFKRNKAFKSHILEKKSPKRKRNFRKAALVSKSDYKRVAR 62

Query: 61 NYLPNG 66
            LPNG
Sbjct: 63 -LLPNG 67


>gi|148238395|ref|YP_001223782.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7803]
 gi|166233046|sp|A5GHS0|RL35_SYNPW RecName: Full=50S ribosomal protein L35
 gi|147846934|emb|CAK22485.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7803]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D  +V  
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEDRVA- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|126663526|ref|ZP_01734523.1| ribosomal protein L35 [Flavobacteria bacterium BAL38]
 gi|126624474|gb|EAZ95165.1| ribosomal protein L35 [Flavobacteria bacterium BAL38]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K       + ++   D + + +
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKKRKLALTHSGLVHKTDERSIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|118572997|sp|Q1ITT1|RL35_ACIBL RecName: Full=50S ribosomal protein L35
          Length = 64

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KRF  TATGKV+   A KRH +  +S K  R+     +++ AD  K+ R
Sbjct: 1  MPKLKTHSGAAKRFKKTATGKVKRSKAFKRHILTSKSTKKKRHFDMEGLVSKADTPKIKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|308068136|ref|YP_003869741.1| 50S ribosomal protein L35 [Paenibacillus polymyxa E681]
 gi|305857415|gb|ADM69203.1| 50S ribosomal protein L35 [Paenibacillus polymyxa E681]
          Length = 66

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT TGKV    A K H +  +S +  R       +A  D K++ +
Sbjct: 1  MPKMKTHSSLKGRFKITGTGKVMRYKAYKNHLLSHKSKRAKRVLGTNPEMAPGDVKRLKQ 60

Query: 61 NYL 63
             
Sbjct: 61 GLA 63


>gi|67920998|ref|ZP_00514517.1| Ribosomal protein L35 [Crocosphaera watsonii WH 8501]
 gi|67857115|gb|EAM52355.1| Ribosomal protein L35 [Crocosphaera watsonii WH 8501]
          Length = 75

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T +G K+  + A K H +  +S +   R      +++  D   V
Sbjct: 9  MPKLKTRKAAAKRFRVTGSGKKIVRRKAFKNHLLNHKSAERKRRRLSNAALVSEQDEPNV 68

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 69 -RLMLPY 74


>gi|91715065|gb|ABE54991.1| LSU ribosomal protein L35P [Shewanella denitrificans OS217]
          Length = 82

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   ++A +D   + R
Sbjct: 19 MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 77

Query: 61 NYLPN 65
            LP 
Sbjct: 78 Q-LPY 81


>gi|89900132|ref|YP_522603.1| 50S ribosomal protein L35 [Rhodoferax ferrireducens T118]
 gi|89344869|gb|ABD69072.1| LSU ribosomal protein L35P [Rhodoferax ferrireducens T118]
          Length = 73

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R  RG+  +   D  ++
Sbjct: 7  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGSTAVHETDMGRM 64


>gi|30682291|ref|NP_850047.1| ribosomal protein L35 family protein [Arabidopsis thaliana]
 gi|17529002|gb|AAL38711.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|20465445|gb|AAM20182.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|330252434|gb|AEC07528.1| Ribosomal protein L35 [Arabidopsis thaliana]
          Length = 145

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK          +  +D   VI   
Sbjct: 76  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGA- 134

Query: 63  LPN 65
           LP 
Sbjct: 135 LPY 137


>gi|307822738|ref|ZP_07652969.1| ribosomal protein L35 [Methylobacter tundripaludum SV96]
 gi|307736342|gb|EFO07188.1| ribosomal protein L35 [Methylobacter tundripaludum SV96]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T  G  +   + +RH + K+S K  R  R    +  +D  ++  
Sbjct: 1  MPKIKTNRGAAKRFRRTGNGGFKCGQSHRRHILTKKSTKRKRQLRSPATIHPSDV-RMAA 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 RMMPY 64


>gi|302386671|ref|YP_003822493.1| ribosomal protein L35 [Clostridium saccharolyticum WM1]
 gi|302197299|gb|ADL04870.1| ribosomal protein L35 [Clostridium saccharolyticum WM1]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ S+ KRF +T TGK+    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKLKTSKSAAKRFKVTGTGKLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNAKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|256822930|ref|YP_003146893.1| 50S ribosomal protein L35 [Kangiella koreensis DSM 16069]
 gi|256796469|gb|ACV27125.1| ribosomal protein L35 [Kangiella koreensis DSM 16069]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA+G+ + + +  RH + K+S K  R+ R   ++ +AD + + R
Sbjct: 1  MPKMKTDRGASKRFKKTASGRYKHKQSHLRHILTKKSTKRKRHLRHAKLVDAADTRSIDR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -MLPNG 65


>gi|195625112|gb|ACG34386.1| 50S ribosomal protein L35 [Zea mays]
          Length = 143

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V    
Sbjct: 74  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNVTGA- 132

Query: 63  LPN 65
           LP 
Sbjct: 133 LPY 135


>gi|126652712|ref|ZP_01724873.1| 50S ribosomal protein L35 [Bacillus sp. B14905]
 gi|169829540|ref|YP_001699698.1| 50S ribosomal protein L35 [Lysinibacillus sphaericus C3-41]
 gi|299535484|ref|ZP_07048806.1| 50S ribosomal protein L35 [Lysinibacillus fusiformis ZC1]
 gi|226725030|sp|B1HWC9|RL35_LYSSC RecName: Full=50S ribosomal protein L35
 gi|126590561|gb|EAZ84679.1| 50S ribosomal protein L35 [Bacillus sp. B14905]
 gi|168994028|gb|ACA41568.1| 50S ribosomal protein L35 [Lysinibacillus sphaericus C3-41]
 gi|298729245|gb|EFI69798.1| 50S ribosomal protein L35 [Lysinibacillus fusiformis ZC1]
          Length = 66

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R+ R   +++S D K++ 
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKYDRAYGSHLFANKSTKQKRHLRKANIVSSGDFKRIK 59


>gi|117618221|ref|YP_856848.1| ribosomal protein L35 [Aeromonas hydrophila subsp. hydrophila
          ATCC 7966]
 gi|166231149|sp|A0KKP7|RL35_AERHH RecName: Full=50S ribosomal protein L35
 gi|117559628|gb|ABK36576.1| ribosomal protein L35 [Aeromonas hydrophila subsp. hydrophila
          ATCC 7966]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R       +++AD K+V+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRQLGPKFFVSAADHKRVV 59


>gi|78211613|ref|YP_380392.1| 50S ribosomal protein L35 [Synechococcus sp. CC9605]
 gi|260436768|ref|ZP_05790738.1| ribosomal protein L35 [Synechococcus sp. WH 8109]
 gi|148887123|sp|Q3ANJ5|RL35_SYNSC RecName: Full=50S ribosomal protein L35
 gi|78196072|gb|ABB33837.1| ribosomal protein L35 [Synechococcus sp. CC9605]
 gi|260414642|gb|EEX07938.1| ribosomal protein L35 [Synechococcus sp. WH 8109]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  ++ K  R+     V+   D ++V  
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKTPKQKRHLATKAVVDRTDEERVT- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|29654622|ref|NP_820314.1| LSU ribosomal protein L35P [Coxiella burnetii RSA 493]
 gi|154706368|ref|YP_001424761.1| 50S ribosomal protein L35 [Coxiella burnetii Dugway 5J108-111]
 gi|161349055|ref|ZP_02096440.1| ribosomal protein L35 [Coxiella burnetii 'MSU Goat Q177']
 gi|212212294|ref|YP_002303230.1| 50S ribosomal protein L35 [Coxiella burnetii CbuG_Q212]
 gi|212218737|ref|YP_002305524.1| 50S ribosomal protein L35 [Coxiella burnetii CbuK_Q154]
 gi|54036303|sp|Q83C12|RL35_COXBU RecName: Full=50S ribosomal protein L35
 gi|189042764|sp|A9KGB9|RL35_COXBN RecName: Full=50S ribosomal protein L35
 gi|226724988|sp|B6J7Y0|RL35_COXB1 RecName: Full=50S ribosomal protein L35
 gi|226724989|sp|B6IZF7|RL35_COXB2 RecName: Full=50S ribosomal protein L35
 gi|29541890|gb|AAO90828.1| LSU ribosomal protein L35P [Coxiella burnetii RSA 493]
 gi|154355654|gb|ABS77116.1| LSU ribosomal protein L35P [Coxiella burnetii Dugway 5J108-111]
 gi|164601496|gb|EDQ95125.1| ribosomal protein L35 [Coxiella burnetii 'MSU Goat Q177']
 gi|212010704|gb|ACJ18085.1| LSU ribosomal protein L35P [Coxiella burnetii CbuG_Q212]
 gi|212012999|gb|ACJ20379.1| LSU ribosomal protein L35P [Coxiella burnetii CbuK_Q154]
          Length = 64

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF +T +GK++  A+   H + K+S K  R  R    +A +D + V
Sbjct: 1  MPKLKTNRGAVKRFKVTGSGKIKRAASNHNHILTKKSQKRKRRLRKIHEVAPSDMRAV 58


>gi|325263823|ref|ZP_08130556.1| ribosomal protein L35 [Clostridium sp. D5]
 gi|324030861|gb|EGB92143.1| ribosomal protein L35 [Clostridium sp. D5]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K  ++
Sbjct: 1  MPKIKTNRAAAKRFKVTGTGKLKRNKAYKSHILTKKSTKRKRNLRHPAITDATNVKN-MK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KVLPY 64


>gi|147678289|ref|YP_001212504.1| 50S ribosomal protein L35 [Pelotomaculum thermopropionicum SI]
 gi|189042777|sp|A5D0U5|RL35_PELTS RecName: Full=50S ribosomal protein L35
 gi|146274386|dbj|BAF60135.1| ribosomal protein L35 [Pelotomaculum thermopropionicum SI]
          Length = 63

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  TA GK +   A   H + K++ K  RN R   V++ ADA+++ R
Sbjct: 1  MPKIKTHRGAAKRFKQTAGGKWKGSHAFHSHILGKKTAKRKRNLRKVTVISMADARRLKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|88809304|ref|ZP_01124812.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805]
 gi|88786523|gb|EAR17682.1| 50S ribosomal protein L35 [Synechococcus sp. WH 7805]
          Length = 65

 Score = 63.2 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S K  R+     V+   D ++V  
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKSPKLKRHLATKAVVDRTDEERVS- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|56460505|ref|YP_155786.1| 50S ribosomal protein L35 [Idiomarina loihiensis L2TR]
 gi|81678394|sp|Q5QYN6|RL35_IDILO RecName: Full=50S ribosomal protein L35
 gi|56179515|gb|AAV82237.1| Ribosomal protein L35 [Idiomarina loihiensis L2TR]
          Length = 65

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA+G  + + +  RH + K+S K  R  R   ++  AD K V+R
Sbjct: 1  MPKMKSNKGASKRFKKTASGGFKCKQSHLRHILTKKSPKRKRQLRAKSMVHEADVKLVVR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|262281014|ref|ZP_06058797.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus RUH2202]
 gi|299771530|ref|YP_003733556.1| 50S ribosomal protein L35 [Acinetobacter sp. DR1]
 gi|262257914|gb|EEY76649.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus RUH2202]
 gi|298701618|gb|ADI92183.1| 50S ribosomal protein L35 [Acinetobacter sp. DR1]
          Length = 64

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF  TA G  + + A KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MPKMKTRRGAAKRFKATAHG-FKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDVNSVRR 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 -MCPY 63


>gi|329904273|ref|ZP_08273745.1| LSU ribosomal protein L35p [Oxalobacteraceae bacterium IMCC9480]
 gi|327548050|gb|EGF32782.1| LSU ribosomal protein L35p [Oxalobacteraceae bacterium IMCC9480]
          Length = 83

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +   G V+  +A KRH + K++ K  R  RG   + + +   V R
Sbjct: 19 MPKMKTKSAAKKRFRVRPGGTVKRGSAFKRHILTKKTTKTKRQLRGAKEVHATNMVSV-R 77

Query: 61 NYLPN 65
          + LP 
Sbjct: 78 SMLPY 82


>gi|332300495|ref|YP_004442416.1| 50S ribosomal protein L35 [Porphyromonas asaccharolytica DSM
          20707]
 gi|332177558|gb|AEE13248.1| 50S ribosomal protein L35 [Porphyromonas asaccharolytica DSM
          20707]
          Length = 64

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT S +KKRF +T +G+V+ + A K H + K+S K  RN   T ++   + K V  
Sbjct: 1  MPKQKTVSGAKKRFFLTGSGRVKRKHAYKSHILTKKSKKRKRNLTYTALVHPHNEKSVKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|297617665|ref|YP_003702824.1| ribosomal protein L35 [Syntrophothermus lipocalidus DSM 12680]
 gi|297145502|gb|ADI02259.1| ribosomal protein L35 [Syntrophothermus lipocalidus DSM 12680]
          Length = 65

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T +G+++   A   H +  +++K  RN R + +++ +D K++
Sbjct: 1  MPKMKTHRGAAKRFRKTGSGRIKRAKAFHSHLLGGKTSKRKRNLRKSTLVSKSDTKRI 58


>gi|297821677|ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
 gi|297324560|gb|EFH54980.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
          Length = 140

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT+ +S KRF +T  GK+  + +GK+H + K++NK          +  +D   VI   
Sbjct: 71  KLKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGA- 129

Query: 63  LPN 65
           LP 
Sbjct: 130 LPY 132


>gi|238898887|ref|YP_002924569.1| 50S ribosomal subunit protein L35 [Candidatus Hamiltonella
          defensa 5AT (Acyrthosiphon pisum)]
 gi|259647357|sp|C4K778|RL35_HAMD5 RecName: Full=50S ribosomal protein L35
 gi|229466647|gb|ACQ68421.1| 50S ribosomal subunit protein L35 [Candidatus Hamiltonella
          defensa 5AT (Acyrthosiphon pisum)]
          Length = 65

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  TA+G  + + A  RH + K+S K  R  R   +++  D   V+ 
Sbjct: 1  MPKIKTVRAAAKRFKKTASGGFKRKHAYLRHILTKKSTKRKRQLRPKGLVSQNDIASVVA 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|163756233|ref|ZP_02163348.1| 50S ribosomal protein L35 [Kordia algicida OT-1]
 gi|161323845|gb|EDP95179.1| 50S ribosomal protein L35 [Kordia algicida OT-1]
          Length = 65

 Score = 62.8 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K       + ++  +D   +  
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAYKSHILTKKSKKRKLALTHSTLVHDSDVNSIKE 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|319942327|ref|ZP_08016642.1| 50S ribosomal protein L35 [Sutterella wadsworthensis 3_1_45B]
 gi|319804200|gb|EFW01100.1| 50S ribosomal protein L35 [Sutterella wadsworthensis 3_1_45B]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF   A+G ++   A KRH +  R+ K  R+ RG + +  +D K V R
Sbjct: 1  MPKMKTKRAAAKRFKPRASGSIKRAHATKRHILSHRTTKNKRHLRGMVTVHESDIKSVKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|78183639|ref|YP_376073.1| 50S ribosomal protein L35 [Synechococcus sp. CC9902]
 gi|116071747|ref|ZP_01469015.1| 50S ribosomal protein L35 [Synechococcus sp. BL107]
 gi|148887122|sp|Q3B0U8|RL35_SYNS9 RecName: Full=50S ribosomal protein L35
 gi|78167933|gb|ABB25030.1| LSU ribosomal protein L35P [Synechococcus sp. CC9902]
 gi|116065370|gb|EAU71128.1| 50S ribosomal protein L35 [Synechococcus sp. BL107]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  ++ K  R+     V+   D ++V  
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFLRRRAFRNHLLDHKTPKQKRHLGTKAVVDRTDVERVT- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|7572943|emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana]
          Length = 140

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK          +  +D   VI   
Sbjct: 71  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGA- 129

Query: 63  LPN 65
           LP 
Sbjct: 130 LPY 132


>gi|332284517|ref|YP_004416428.1| 50S ribosomal protein L35 [Pusillimonas sp. T7-7]
 gi|330428470|gb|AEC19804.1| 50S ribosomal protein L35 [Pusillimonas sp. T7-7]
          Length = 62

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT   + KRF +  +G ++   A KRH + K++ K  R  RG+  +  +D   V +  L
Sbjct: 1  MKTKKGAAKRFKVRGSGSIKRGQAFKRHILTKKTTKNKRQLRGSTAVHDSDVSAV-KAML 59

Query: 64 PN 65
          P 
Sbjct: 60 PF 61


>gi|153955809|ref|YP_001396574.1| 50S ribosomal protein L35 [Clostridium kluyveri DSM 555]
 gi|219856176|ref|YP_002473298.1| hypothetical protein CKR_2833 [Clostridium kluyveri NBRC 12016]
 gi|189042762|sp|A5N257|RL35_CLOK5 RecName: Full=50S ribosomal protein L35
 gi|254802444|sp|B9E5V9|RL35_CLOK1 RecName: Full=50S ribosomal protein L35
 gi|146348667|gb|EDK35203.1| RpmI [Clostridium kluyveri DSM 555]
 gi|219569900|dbj|BAH07884.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF +T TGK++   A K H + K+S K  RN R T  ++    +KV++
Sbjct: 1  MPKMKTKKSVAKRFKLTGTGKLKRAQAFKSHILTKKSRKTKRNLRKTAYVSET-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|295109211|emb|CBL23164.1| LSU ribosomal protein L35P [Ruminococcus obeum A2-162]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R   V+ S + K + +
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKIMRNKAYKSHILTKKSQKRKRNLRKATVVDSTNLKNIKK 60

Query: 61 NY 62
            
Sbjct: 61 AL 62


>gi|317052584|ref|YP_004113700.1| 50S ribosomal protein L35 [Desulfurispirillum indicum S5]
 gi|316947668|gb|ADU67144.1| ribosomal protein L35 [Desulfurispirillum indicum S5]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  T +GK+R   A  RH + K+S+K     +   ++A+ D   V R
Sbjct: 1  MYKLKTKRAAAKRFKATGSGKIRRNQAFMRHILTKKSSKRKSQLKNPALVAAVDVPNVKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|170781628|ref|YP_001709960.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          sepedonicus]
 gi|189042760|sp|B0RHC1|RL35_CLAMS RecName: Full=50S ribosomal protein L35
 gi|169156196|emb|CAQ01338.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          sepedonicus]
          Length = 64

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  Q AG RH +  +S+K          LA AD K   +
Sbjct: 1  MPKQKTHSGAKKRFKVTGSGKIMKQQAGMRHNLEVKSSKRKARLNQDQPLAKADMKVAKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|150016446|ref|YP_001308700.1| 50S ribosomal protein L35 [Clostridium beijerinckii NCIMB 8052]
 gi|189042761|sp|A6LTR4|RL35_CLOB8 RecName: Full=50S ribosomal protein L35
 gi|149902911|gb|ABR33744.1| ribosomal protein L35 [Clostridium beijerinckii NCIMB 8052]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A + H + K+S+K  R+ R    ++ +  K V++
Sbjct: 1  MPKMKTHRGAAKRFRKTGTGKLKRGKAFRSHILTKKSSKTKRHLRKAGYVSDSQLK-VMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|125973739|ref|YP_001037649.1| 50S ribosomal protein L35P [Clostridium thermocellum ATCC 27405]
 gi|256005541|ref|ZP_05430502.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
 gi|281417895|ref|ZP_06248915.1| ribosomal protein L35 [Clostridium thermocellum JW20]
 gi|166231180|sp|A3DES7|RL35_CLOTH RecName: Full=50S ribosomal protein L35
 gi|125713964|gb|ABN52456.1| LSU ribosomal protein L35P [Clostridium thermocellum ATCC 27405]
 gi|255990521|gb|EEU00642.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
 gi|281409297|gb|EFB39555.1| ribosomal protein L35 [Clostridium thermocellum JW20]
 gi|316940067|gb|ADU74101.1| ribosomal protein L35 [Clostridium thermocellum DSM 1313]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+SSSKKRF +T TGKV+   A K H + K+++K  RN R + + +SA+A  VI+
Sbjct: 1  MPKIKTHSSSKKRFKLTGTGKVKRAKAYKSHILTKKTSKRKRNLRKSTIASSANAS-VIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KLIPY 64


>gi|326500078|dbj|BAJ90874.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326532034|dbj|BAK01393.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326532788|dbj|BAJ89239.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 140

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T TGK+  + AGK+H + K++ K  +     + +  +D   V+   
Sbjct: 71  KMKTHKASAKRFRVTGTGKIVRRCAGKQHLLSKKNAKRRKRLSKMVQVNKSDYSNVMGA- 129

Query: 63  LPN 65
           LP 
Sbjct: 130 LPY 132


>gi|113954838|ref|YP_729297.1| 50S ribosomal protein L35 [Synechococcus sp. CC9311]
 gi|122945886|sp|Q0IE25|RL35_SYNS3 RecName: Full=50S ribosomal protein L35
 gi|113882189|gb|ABI47147.1| ribosomal protein L35 [Synechococcus sp. CC9311]
          Length = 65

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A   H +  ++ K  R+ +   V+   D ++V  
Sbjct: 1  MPKLKTRKAAAKRFKATGTGKFMRRRAFHNHLLDHKTPKQKRHLKTKAVVDRTDEERVT- 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMMPY 64


>gi|324998028|ref|ZP_08119140.1| 50S ribosomal protein L35 [Pseudonocardia sp. P1]
          Length = 64

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KR   T +GK+  Q AG RH +  +S K  R+  GT+ +A  D K+V +
Sbjct: 1  MPKNKTHKGTAKRVRTTGSGKLMRQQAGLRHRLEVKSRKEKRDLSGTVDVAKPDVKRVKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|148273191|ref|YP_001222752.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
 gi|166231175|sp|A5CSK2|RL35_CLAM3 RecName: Full=50S ribosomal protein L35
 gi|147831121|emb|CAN02073.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
          Length = 64

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T TGK+  Q AG RH +  +S+           LA AD K   +
Sbjct: 1  MPKQKTHSGAKKRFKVTGTGKIMKQQAGMRHNLEVKSSGRKARLNQDQPLAKADMKVAKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|256830758|ref|YP_003159486.1| 50S riboosomal protein L35 [Desulfomicrobium baculatum DSM 4028]
 gi|256579934|gb|ACU91070.1| ribosomal protein L35 [Desulfomicrobium baculatum DSM 4028]
          Length = 66

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KTN S+ KRF +T TGKV+   A  RH + K+S K  R  R + + A +    + R
Sbjct: 1  MSKVKTNRSAAKRFRVTGTGKVKRSHANMRHILTKKSAKRKRQLRQSTMTAQSCVGAIRR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MVPY 64


>gi|237731271|ref|ZP_04561752.1| 50S ribosomal subunit protein A [Citrobacter sp. 30_2]
 gi|226906810|gb|EEH92728.1| 50S ribosomal subunit protein A [Citrobacter sp. 30_2]
          Length = 70

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  T  G  + + A  RH + K+S K  R+ R   +++  D   VI 
Sbjct: 6  MPKIKTVRGAAKRFKKTGGGGFKRKHANLRHILTKKSTKRKRHLRPKGLVSKGDLGLVIA 65

Query: 61 NYLPN 65
            LP 
Sbjct: 66 C-LPY 69


>gi|115375479|ref|ZP_01462739.1| ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|310821382|ref|YP_003953740.1| 50S ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|115367522|gb|EAU66497.1| ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
 gi|309394454|gb|ADO71913.1| 50S ribosomal protein L35 [Stigmatella aurantiaca DW4/3-1]
          Length = 69

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIK-RSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT SS+KKR  +  +GKV+   A  +H     ++    R  RGT  L   DAKKVI
Sbjct: 1  MPKLKTRSSAKKRLQVKKSGKVKHGKAYGKHLFTHAKTPAQKRRNRGTGHLRDMDAKKVI 60

Query: 60 RNYLPNG 66
          +   P G
Sbjct: 61 KEMFPYG 67


>gi|256825066|ref|YP_003149026.1| 50S ribosomal protein L35P [Kytococcus sedentarius DSM 20547]
 gi|256688459|gb|ACV06261.1| LSU ribosomal protein L35P [Kytococcus sedentarius DSM 20547]
          Length = 64

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T +GK+  Q A   H   +RS+   R     + +A AD KK+ +
Sbjct: 1  MPKNKTHSGTKKRFRVTGSGKIMRQRARHVHKFQERSSSDARRLVNDVPVAKADEKKIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|197301818|ref|ZP_03166888.1| hypothetical protein RUMLAC_00545 [Ruminococcus lactaris ATCC
          29176]
 gi|197299258|gb|EDY33788.1| hypothetical protein RUMLAC_00545 [Ruminococcus lactaris ATCC
          29176]
          Length = 79

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K  ++
Sbjct: 15 MPKIKTNRAAAKRFKATGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKN-MK 73

Query: 61 NYLPN 65
            LP 
Sbjct: 74 KVLPY 78


>gi|305664645|ref|YP_003860932.1| 50S ribosomal protein L35 [Maribacter sp. HTCC2170]
 gi|88707346|gb|EAQ99592.1| ribosomal protein L35 [Maribacter sp. HTCC2170]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT SS+KKRF +T TGK++ + A K H + K+S K       + ++  AD   +  
Sbjct: 1  MPKQKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHSGLVHDADVNSIKE 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|94310107|ref|YP_583317.1| 50S ribosomal protein L35 [Cupriavidus metallidurans CH34]
 gi|113867359|ref|YP_725848.1| 50S ribosomal protein L35 [Ralstonia eutropha H16]
 gi|194289385|ref|YP_002005292.1| 50S ribosomal protein l35 [Cupriavidus taiwanensis LMG 19424]
 gi|123329356|sp|Q0KBZ1|RL35_RALEH RecName: Full=50S ribosomal protein L35
 gi|148887099|sp|Q1LP78|RL35_RALME RecName: Full=50S ribosomal protein L35
 gi|226724990|sp|B3R4J3|RL35_CUPTR RecName: Full=50S ribosomal protein L35
 gi|93353959|gb|ABF08048.1| 50S ribosomal subunit protein L35 [Cupriavidus metallidurans
          CH34]
 gi|113526135|emb|CAJ92480.1| LSU ribosomal protein L35 [Ralstonia eutropha H16]
 gi|193223220|emb|CAQ69225.1| 50S ribosomal subunit protein A [Cupriavidus taiwanensis LMG
          19424]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G  +   A KRH + K++ K  R  RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPNGSFKRGQAFKRHILTKKTTKNKRQLRGTQDVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|55980521|ref|YP_143818.1| 50S ribosomal protein L35 [Thermus thermophilus HB8]
 gi|161611246|ref|YP_004159.2| 50S ribosomal protein L35 [Thermus thermophilus HB27]
 gi|62287408|sp|Q5SKU1|RL35_THET8 RecName: Full=50S ribosomal protein L35
 gi|62297685|sp|P80341|RL35_THETH RecName: Full=50S ribosomal protein L35
 gi|118573025|sp|Q72L77|RL35_THET2 RecName: Full=50S ribosomal protein L35
 gi|116668230|pdb|2J01|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Mrna, Trna And Paromomycin (Part 2 Of
          4). This File Contains The 50s Subunit From Molecule I.
 gi|116668291|pdb|2J03|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Mrna, Trna And Paromomycin (Part 4 Of
          4). This File Contains The 50s Subunit From Molecule
          Ii.
 gi|119389763|pdb|2HGJ|7 Chain 7, Crystal Structure Of The 70s Thermus Thermophilus
          Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
          P Codons. This Entry 2hgj Contains 50s Ribosomal
          Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb
          Entry 2hgi.
 gi|119389820|pdb|2HGQ|7 Chain 7, Crystal Structure Of The 70s Thermus Thermophilus
          Ribosome With Translocated And Rotated Shine-Dalgarno
          Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          2hgp.
 gi|119389876|pdb|2HGU|7 Chain 7, 70s T.Th. Ribosome Functional Complex With Mrna And E-
          And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
          Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
          Found In Pdb Entry 2hgr.
 gi|149240912|pdb|1VSA|AA Chain a, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
          Functional Interactions And Rearrangements. This File,
          1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
          Subunit Is In The File 2ow8
 gi|157836518|pdb|2V47|8 Chain 8, Structure Of The Ribosome Recycling Factor Bound To The
          Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
          And Trna-Fmet (Part 2 Of 4). This File Contains The 50s
          Subunit For Molecule 1.
 gi|157836574|pdb|2V49|8 Chain 8, Structure Of The Ribosome Recycling Factor Bound To The
          Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
          And Trna-Fmet (Part 4 Of 4). This File Contains The 50s
          Subunit Of Molecule 2.
 gi|160285454|pdb|1VSP|AA Chain a, Interactions And Dynamics Of The Shine-Dalgarno Helix In
          The 70s Ribosome. This File, 1vsp, Contains The 50s
          Ribosome Subunit. 30s Ribosome Subunit Is In The File
          2qnh
 gi|209156548|pdb|3D5B|8 Chain 8, Structural Basis For Translation Termination On The 70s
          Ribosome. This File Contains The 50s Subunit Of One 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes As Described In Remark 400.
 gi|209156602|pdb|3D5D|8 Chain 8, Structural Basis For Translation Termination On The 70s
          Ribosome. This File Contains The 50s Subunit Of The
          Second 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938851|pdb|2JL6|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4).
          This File Contains The 50s Subunit.
 gi|211938909|pdb|2JL8|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4).
          This File Contains The 50s Subunit.
 gi|218766825|pdb|3F1F|8 Chain 8, Crystal Structure Of A Translation Termination Complex
          Formed With Release Factor Rf2. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes As Described In
          Remark 400.
 gi|218766880|pdb|3F1H|8 Chain 8, Crystal Structure Of A Translation Termination Complex
          Formed With Release Factor Rf2. This File Contains The
          50s Subunit Of The Second 70s Ribosome. The Entire
          Crystal Structure Contains Two 70s Ribosomes As
          Described In Remark 400.
 gi|226887432|pdb|2WDI|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A-Site Trna,
          Deacylated P-Site Trna, And E-Site Trna. This File
          Contains The 50s Subunit For Molecule I.
 gi|226887464|pdb|2WDJ|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A-Site Trna,
          Deacylated P-Site Trna, And E-Site Trna. This File
          Contains The 50s Subunit For Molecule Ii.
 gi|226887521|pdb|2WDL|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A- And P-Site
          Trnas, And E-Site Trna.  This File Contains The 50s
          Subunit For Molecule I.
 gi|226887578|pdb|2WDN|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome In
          Complex With Mrna, Paromomycin, Acylated A- And P-Site
          Trnas, And E-Site Trna.  This File Contains The 50s
          Subunit For Molecule Ii.
 gi|237823562|pdb|2WH2|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome
 gi|237823621|pdb|2WH4|8 Chain 8, Insights Into Translational Termination From The
          Structure Of Rf2 Bound To The Ribosome
 gi|260100040|pdb|3HUX|8 Chain 8, Structure Of Ef-P Bound To The 70s Ribosome; This File
          Contains The 50s Subunit For Molecule I.
 gi|260100096|pdb|3HUZ|8 Chain 8, Structure Of Ef-P Bound To The 70s Ribosome; This File
          Contains The 50s Subunit For Molecule Ii.
 gi|261824517|pdb|2WRJ|8 Chain 8, The Structure Of The Ribosome With Elongation Factor G
          Trapped In The Post-Translocational State (Part 2 Of
          4).
 gi|261824579|pdb|2WRL|8 Chain 8, The Structure Of The Ribosome With Elongation Factor G
          Trapped In The Post-Translocational State. (Part 4 Of
          4).
 gi|261824642|pdb|2WRO|8 Chain 8, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
          And Trna (Part 2 Of 4).
 gi|261824701|pdb|2WRR|8 Chain 8, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
          And Trna (Part 4 Of 4).
 gi|281307222|pdb|3KIR|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Precleavage State; Part 2 Of 4)
 gi|281307280|pdb|3KIT|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Precleavage State; Part 4 Of 4)
 gi|281307338|pdb|3KIW|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Postcleavage State; Part 2 Of 4)
 gi|281307396|pdb|3KIY|8 Chain 8, Structure Of Rele Nuclease Bound To The 70s Ribosome
          (Postcleavage State; Part 4 Of 4)
 gi|288965659|pdb|3KNI|8 Chain 8, The Structures Of Viomycin Bound To The 70s Ribosome.
          This File Contains The 50s Subunit For Molecule I
 gi|288965691|pdb|3KNK|8 Chain 8, The Structures Of Viomycin Bound To The 70s Ribosome.
          This File Contains The 50s Subunit For Molecule Ii.
 gi|288965723|pdb|3KNM|8 Chain 8, The Structures Of Capreomycin Bound To The 70s Ribosome.
          Thi Contains The 50s Subunit For Molecule I.
 gi|288965755|pdb|3KNO|8 Chain 8, The Structures Of Capreomycin Bound To The 70s Ribosome.
          Thi Contains The 50s Subunit For Molecule Ii
 gi|294979503|pdb|3I8F|8 Chain 8, Elongation Complex Of The 70s Ribosome With Three Trnas
          And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
          Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
          The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
          (50s).
 gi|294979587|pdb|3I8I|8 Chain 8, Elongation Complex Of The 70s Ribosome With Three Trnas
          And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
          Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
          The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
          (30s).
 gi|294979641|pdb|3I9C|8 Chain 8, Initiation Complex Of 70s Ribosome With Two Trnas And
          Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule
          B. The 30s Subunit Can Be Found In Pdb Entry 3i9b.
          Molecule A In The S Asymmetric Unit Is Deposited As
          3i9d (30s) And 3i9e (50s)
 gi|294979695|pdb|3I9E|8 Chain 8, Initiation Complex Of 70s Ribosome With Two Trnas And
          Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule
          A. The 30s Subunit Can Be Found In Pdb Entry 3i9d.
          Molecule B In The S Asymmetric Unit Is Deposited As
          3i9b (30s) And 3i9c (50s)
 gi|295982108|pdb|2X9S|8 Chain 8, Structure Of The 70s Ribosome Bound To Release Factor 2
          And A Substrate Analog Provides Insights Into Catalysis
          Of Peptide Release
 gi|295982167|pdb|2X9U|8 Chain 8, Structure Of The 70s Ribosome Bound To Release Factor 2
          And A Substrate Analog Provides Insights Into Catalysis
          Of Peptide Release
 gi|307567995|pdb|2XG0|8 Chain 8, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
          70s Ribosome (Part 2 Of 4)
 gi|307568053|pdb|2XG2|8 Chain 8, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
          70s Ribosome (Part 4 Of 4)
 gi|309320285|pdb|3OH5|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Chloramphenicol. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320315|pdb|3OH7|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Chloramphenicol. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320387|pdb|3OHJ|8 Chain 8, Structure Of The Thermus Thermophilus Ribosome Complexed
          With Erythromycin. This File Contains The 50s Subunit
          Of One 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes.
 gi|309320417|pdb|3OHK|8 Chain 8, Structure Of The Thermus Thermophilus Ribosome Complexed
          With Erythromycin. This File Contains The 50s Subunit
          Of One 70s Ribosome. The Entire Crystal Structure
          Contains Two 70s Ribosomes.
 gi|309320468|pdb|3OHZ|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Azithromycin. This File Contains The 50s
          Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320519|pdb|3OI1|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Azithromycin. This File Contains The 50s
          Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320570|pdb|3OI3|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Telithromycin. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|309320621|pdb|3OI5|8 Chain 8, Structure Of The Thermus Thermophilus 70s Ribosome
          Complexed With Telithromycin. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes.
 gi|312207707|pdb|2XQE|8 Chain 8, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
          70s Ribosome With A Gtp Analog
 gi|313754031|pdb|2XTG|8 Chain 8, Trna Tranlocation On The 70s Ribosome: The        Pre-
          Translocational Translocation Intermediate Ti(Pre)
 gi|313754089|pdb|2XUX|8 Chain 8, Trna Tranlocation On The 70s Ribosome: The Post-
          Translocational Translocation Intermediate Ti(Post)
 gi|325533436|pdb|2Y0V|8 Chain 8, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
          A Near-Cognate Codon On The 70s Ribosome
 gi|325533495|pdb|2Y0X|8 Chain 8, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
          A Near-Cognate Codon On The 70s Ribosome
 gi|325533554|pdb|2Y0Z|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Near-Cognate Codon On The 70s Ribosome
 gi|325533613|pdb|2Y11|8 Chain 8, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
          A Cognate Codon On The 70s Ribosome.
 gi|325533672|pdb|2Y13|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Near-Cognate Codon On The 70s Ribosome
 gi|325533731|pdb|2Y15|8 Chain 8, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
          To A Cognate Codon On The 70s Ribosome.
 gi|325533790|pdb|2Y17|8 Chain 8, Ef-Tu Complex 3
 gi|325533849|pdb|2Y19|8 Chain 8, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
          A Cognate Codon On The 70s Ribosome.
 gi|55771934|dbj|BAD70375.1| 50S ribosomal protein L35 [Thermus thermophilus HB8]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A+++ +
Sbjct: 1  MPKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LLLPY 64


>gi|291550175|emb|CBL26437.1| LSU ribosomal protein L35P [Ruminococcus torques L2-14]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K  ++
Sbjct: 1  MPKIKTNRAAAKRFKVTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKN-MK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KVLPY 64


>gi|313896283|ref|ZP_07829836.1| ribosomal protein L35 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529198|ref|ZP_08030290.1| ribosomal protein L35 [Selenomonas artemidis F0399]
 gi|312975082|gb|EFR40544.1| ribosomal protein L35 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138828|gb|EFW30718.1| ribosomal protein L35 [Selenomonas artemidis F0399]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF+ T +G+ R   A KRH + K+S K  RN R   +  ++D K++ R
Sbjct: 1  MPKIKTRRAAAKRFTATGSGEFRRNKAYKRHILEKKSPKRKRNLRKAALADTSDYKRI-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KMLPY 64


>gi|317057704|ref|YP_004106171.1| 50S ribosomal protein L35 [Ruminococcus albus 7]
 gi|325677959|ref|ZP_08157601.1| ribosomal protein L35 [Ruminococcus albus 8]
 gi|315449973|gb|ADU23537.1| ribosomal protein L35 [Ruminococcus albus 7]
 gi|324110513|gb|EGC04687.1| ribosomal protein L35 [Ruminococcus albus 8]
          Length = 66

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF +T TGKV+ Q   KRH + ++ +K  R  R        +   V +
Sbjct: 1  MPKIKTHSGAKKRFRVTGTGKVKFQHVNKRHRLNQKDHKRKRILRNAAYADDTNIANV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 ALIPY 64


>gi|83748299|ref|ZP_00945324.1| LSU ribosomal protein L35P [Ralstonia solanacearum UW551]
 gi|207724053|ref|YP_002254451.1| 50s ribosomal protein l35 [Ralstonia solanacearum MolK2]
 gi|207742948|ref|YP_002259340.1| 50s ribosomal protein l35 [Ralstonia solanacearum IPO1609]
 gi|300703880|ref|YP_003745482.1| 50S ribosomal subunit protein a [Ralstonia solanacearum CFBP2957]
 gi|83725031|gb|EAP72184.1| LSU ribosomal protein L35P [Ralstonia solanacearum UW551]
 gi|206589262|emb|CAQ36224.1| 50s ribosomal protein l35 [Ralstonia solanacearum MolK2]
 gi|206594343|emb|CAQ61270.1| 50s ribosomal protein l35 [Ralstonia solanacearum IPO1609]
 gi|299071543|emb|CBJ42867.1| 50S ribosomal subunit protein A [Ralstonia solanacearum CFBP2957]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R  RGT  +   + K V R
Sbjct: 1  MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|225873836|ref|YP_002755295.1| ribosomal protein L35 [Acidobacterium capsulatum ATCC 51196]
 gi|254802249|sp|C1FA53|RL35_ACIC5 RecName: Full=50S ribosomal protein L35
 gi|225792153|gb|ACO32243.1| ribosomal protein L35 [Acidobacterium capsulatum ATCC 51196]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   +  RH +  +  K  R    +  ++ AD  KV R
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKIKRGQSKMRHILTSKETKTKRKLTASAYVSDADHAKVAR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MIPY 64


>gi|239993781|ref|ZP_04714305.1| ribosomal protein L35 [Alteromonas macleodii ATCC 27126]
 gi|332141018|ref|YP_004426756.1| 50S ribosomal protein L35 [Alteromonas macleodii str. 'Deep
          ecotype']
 gi|226713813|sp|B4RSL6|RL35_ALTMD RecName: Full=50S ribosomal protein L35
 gi|327551040|gb|AEA97758.1| 50S ribosomal protein L35 [Alteromonas macleodii str. 'Deep
          ecotype']
 gi|332993605|gb|AEF03660.1| 50S ribosomal protein L35 [Alteromonas sp. SN2]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  T +G+ +++ +  RH + K+S+K  R+ RG  ++  +D K V R
Sbjct: 1  MPKMKTVSGAAKRFKKTGSGRFKSKQSHLRHILTKKSSKRKRHLRGKKLVHDSDTKLVQR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|221134664|ref|ZP_03560967.1| ribosomal protein L35 [Glaciecola sp. HTCC2999]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRF  TA+G+ +++ +  RH + K+S K  R+ RG  ++  +D K + R
Sbjct: 1  MPKMKSNSGAAKRFRKTASGRFKSKQSHLRHILTKKSTKRKRHLRGKKLVHDSDTKLIQR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|332709211|ref|ZP_08429177.1| LSU ribosomal protein L35P [Lyngbya majuscula 3L]
 gi|332352020|gb|EGJ31594.1| LSU ribosomal protein L35P [Lyngbya majuscula 3L]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+  S+ KRF  T +GK+R + A K H +  ++++         ++   DA  V R
Sbjct: 1  MPKLKSRKSAAKRFRATGSGKIRRRKAFKNHLLEHKTSERKGRLSKLTLVDERDADNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|330829616|ref|YP_004392568.1| 50S ribosomal protein L35 [Aeromonas veronii B565]
 gi|328804752|gb|AEB49951.1| 50S ribosomal protein L35 [Aeromonas veronii B565]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R      ++++AD K+V+
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRQLGPKFMVSAADHKRVV 59


>gi|86147530|ref|ZP_01065841.1| 50S ribosomal protein L35 [Vibrio sp. MED222]
 gi|148982344|ref|ZP_01816721.1| 50S ribosomal protein L35 [Vibrionales bacterium SWAT-3]
 gi|218709223|ref|YP_002416844.1| 50S ribosomal protein L35 [Vibrio splendidus LGP32]
 gi|254803583|sp|B7VN19|RL35_VIBSL RecName: Full=50S ribosomal protein L35
 gi|85834698|gb|EAQ52845.1| 50S ribosomal protein L35 [Vibrio sp. MED222]
 gi|145960524|gb|EDK25887.1| 50S ribosomal protein L35 [Vibrionales bacterium SWAT-3]
 gi|218322242|emb|CAV18360.1| 50S ribosomal protein L35 [Vibrio splendidus LGP32]
          Length = 64

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + AGKRH + KR+ K  R  R   +L   +  +V+R
Sbjct: 1  MPKMKTNKGAAKRFQKTAGG-IKFKHAGKRHILTKRTTKNKRQLRPNSILPKCEVAQVLR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|332521038|ref|ZP_08397496.1| ribosomal protein L35 [Lacinutrix algicola 5H-3-7-4]
 gi|332043131|gb|EGI79328.1| ribosomal protein L35 [Lacinutrix algicola 5H-3-7-4]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K       + ++  AD   V 
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHSALVHEADENNVK 59


>gi|304317239|ref|YP_003852384.1| ribosomal protein L35 [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
 gi|302778741|gb|ADL69300.1| ribosomal protein L35 [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/60 (46%), Positives = 37/60 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF++T +GKV+   A KRH + K+S K  RN R    L   DAK + R
Sbjct: 1  MPKMKTHRGAAKRFALTKSGKVKRSKAFKRHILTKKSRKTKRNLRKIAYLYKTDAKNIKR 60


>gi|37522354|ref|NP_925731.1| 50S ribosomal protein L35 [Gloeobacter violaceus PCC 7421]
 gi|54036285|sp|Q7NGV2|RL35_GLOVI RecName: Full=50S ribosomal protein L35
 gi|35213354|dbj|BAC90726.1| 50S ribosomal protein L35 [Gloeobacter violaceus PCC 7421]
          Length = 65

 Score = 62.4 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KR+ +T +GK+R + AGK H +  +S    R+    + ++  D  KV R
Sbjct: 1  MPKMKTRQSAAKRYEVTGSGKLRRRRAGKNHLLQHKSAARKRSLSTKVEVSETDLYKVTR 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|56421252|ref|YP_148570.1| 50S ribosomal protein L35 [Geobacillus kaustophilus HTA426]
 gi|261418268|ref|YP_003251950.1| 50S ribosomal protein L35 [Geobacillus sp. Y412MC61]
 gi|297529122|ref|YP_003670397.1| ribosomal protein L35 [Geobacillus sp. C56-T3]
 gi|319767772|ref|YP_004133273.1| ribosomal protein L35 [Geobacillus sp. Y412MC52]
 gi|132914|sp|P13069|RL35_BACST RecName: Full=50S ribosomal protein L35
 gi|81675732|sp|Q5KWD4|RL35_GEOKA RecName: Full=50S ribosomal protein L35
 gi|39962|emb|CAA34313.1| unnamed protein product [Geobacillus stearothermophilus]
 gi|56381094|dbj|BAD77002.1| 50S ribosomal protein L35 [Geobacillus kaustophilus HTA426]
 gi|261374725|gb|ACX77468.1| ribosomal protein L35 [Geobacillus sp. Y412MC61]
 gi|297252374|gb|ADI25820.1| ribosomal protein L35 [Geobacillus sp. C56-T3]
 gi|317112638|gb|ADU95130.1| ribosomal protein L35 [Geobacillus sp. Y412MC52]
          Length = 66

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  TA+GK++   A   H    ++ K  R+ R   +++  D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTASGKLKRGHAYTSHLFANKTKKQKRHLRKATLVSPGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|227111543|ref|ZP_03825199.1| 50S ribosomal protein L35 [Pectobacterium carotovorum subsp.
          brasiliensis PBR1692]
 gi|227327043|ref|ZP_03831067.1| 50S ribosomal protein L35 [Pectobacterium carotovorum subsp.
          carotovorum WPP14]
          Length = 65

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGLVSKGDLGLVI 59


>gi|332529093|ref|ZP_08405057.1| 50S ribosomal protein L35 [Hylemonella gracilis ATCC 19624]
 gi|332041316|gb|EGI77678.1| 50S ribosomal protein L35 [Hylemonella gracilis ATCC 19624]
          Length = 67

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++KKRF +   G V+   A KRH + K++ K  R+ RG + + + +   +  
Sbjct: 1  MPKMKTKSAAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGAVNVHATNMGHMA- 59

Query: 61 NYLP 64
            LP
Sbjct: 60 QMLP 63


>gi|205374569|ref|ZP_03227365.1| 50S ribosomal protein L35 [Bacillus coahuilensis m4-4]
          Length = 65

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R   V+++ D K++ 
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKGAVVSAGDYKRIR 59


>gi|153808045|ref|ZP_01960713.1| hypothetical protein BACCAC_02331 [Bacteroides caccae ATCC 43185]
 gi|237716080|ref|ZP_04546561.1| 50S ribosomal protein L35 [Bacteroides sp. D1]
 gi|237722135|ref|ZP_04552616.1| 50S ribosomal protein L35 [Bacteroides sp. 2_2_4]
 gi|255692012|ref|ZP_05415687.1| ribosomal protein L35 [Bacteroides finegoldii DSM 17565]
 gi|262407692|ref|ZP_06084240.1| ribosomal protein L35 [Bacteroides sp. 2_1_22]
 gi|294808460|ref|ZP_06767213.1| ribosomal protein L35 [Bacteroides xylanisolvens SD CC 1b]
 gi|298480840|ref|ZP_06999035.1| ribosomal protein L35 [Bacteroides sp. D22]
 gi|149129654|gb|EDM20868.1| hypothetical protein BACCAC_02331 [Bacteroides caccae ATCC 43185]
 gi|229443727|gb|EEO49518.1| 50S ribosomal protein L35 [Bacteroides sp. D1]
 gi|229447945|gb|EEO53736.1| 50S ribosomal protein L35 [Bacteroides sp. 2_2_4]
 gi|260622258|gb|EEX45129.1| ribosomal protein L35 [Bacteroides finegoldii DSM 17565]
 gi|262354500|gb|EEZ03592.1| ribosomal protein L35 [Bacteroides sp. 2_1_22]
 gi|294444388|gb|EFG13102.1| ribosomal protein L35 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085229|emb|CBK66752.1| LSU ribosomal protein L35P [Bacteroides xylanisolvens XB1A]
 gi|298272863|gb|EFI14429.1| ribosomal protein L35 [Bacteroides sp. D22]
          Length = 65

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS SKKRF++T TGK++ + A   H + K++ K  RN   +  + + +  +V  
Sbjct: 1  MPKMKTNSGSKKRFTLTGTGKIKRKHAFHSHILTKKTKKRKRNLCYSTTVDTTNVSQVKE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|17546298|ref|NP_519700.1| 50S ribosomal protein L35 [Ralstonia solanacearum GMI1000]
 gi|20139462|sp|Q8XZ27|RL35_RALSO RecName: Full=50S ribosomal protein L35
 gi|17428595|emb|CAD15281.1| probable 50s ribosomal protein l35 [Ralstonia solanacearum
          GMI1000]
 gi|299066588|emb|CBJ37778.1| 50S ribosomal subunit protein A [Ralstonia solanacearum CMR15]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R  RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|123967084|ref|YP_001012165.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9515]
 gi|123969402|ref|YP_001010260.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. AS9601]
 gi|157414267|ref|YP_001485133.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9215]
 gi|166199819|sp|A2BZ47|RL35_PROM5 RecName: Full=50S ribosomal protein L35
 gi|166199820|sp|A2BTP2|RL35_PROMS RecName: Full=50S ribosomal protein L35
 gi|166988036|sp|A8G7G6|RL35_PROM2 RecName: Full=50S ribosomal protein L35
 gi|123199512|gb|ABM71153.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. AS9601]
 gi|123201450|gb|ABM73058.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9515]
 gi|157388842|gb|ABV51547.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9215]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V R
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAFHNHLLDHKSSKLKRHLSTKAVVDERDADNV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMIPY 64


>gi|300691317|ref|YP_003752312.1| 50S ribosomal subunit protein A [Ralstonia solanacearum PSI07]
 gi|299078377|emb|CBJ51027.1| 50S ribosomal subunit protein A [Ralstonia solanacearum PSI07]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R+ RGT  +   + K V R
Sbjct: 1  MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|138896278|ref|YP_001126731.1| 50S ribosomal protein L35 [Geobacillus thermodenitrificans
          NG80-2]
 gi|166231188|sp|A4IRN2|RL35_GEOTN RecName: Full=50S ribosomal protein L35
 gi|134267791|gb|ABO67986.1| Ribosomal protein L35 [Geobacillus thermodenitrificans NG80-2]
          Length = 66

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  TA+GK++   A   H    ++ K  R+ R   +++  D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTASGKLKRGHAYTSHLFANKTKKQKRHLRKAALVSPGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|73540971|ref|YP_295491.1| 50S ribosomal protein L35 [Ralstonia eutropha JMP134]
 gi|148887098|sp|Q472N6|RL35_RALEJ RecName: Full=50S ribosomal protein L35
 gi|72118384|gb|AAZ60647.1| Ribosomal protein L35 [Ralstonia eutropha JMP134]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G  +   A KRH + K++ K  R+ RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPNGSFKRGQAFKRHILTKKTTKNKRHLRGTQDVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|15616747|ref|NP_239959.1| 50S ribosomal protein L35 [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|219681502|ref|YP_002467887.1| 50S ribosomal protein L35 [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|219682058|ref|YP_002468442.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|257471183|ref|ZP_05635182.1| 50S ribosomal protein L35 [Buchnera aphidicola str. LSR1
          (Acyrthosiphon pisum)]
 gi|11134524|sp|P57227|RL35_BUCAI RecName: Full=50S ribosomal protein L35
 gi|254802438|sp|B8D8S8|RL35_BUCA5 RecName: Full=50S ribosomal protein L35
 gi|254802439|sp|B8D732|RL35_BUCAT RecName: Full=50S ribosomal protein L35
 gi|25295677|pir||E84944 50S ribosomal protein L35 [imported] - Buchnera sp. (strain APS)
 gi|10038810|dbj|BAB12845.1| 50S ribosomal protein L35 [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|219621791|gb|ACL29947.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|219624345|gb|ACL30500.1| 50S ribosomal protein L35 [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|311085871|gb|ADP65953.1| 50S ribosomal protein L35 [Buchnera aphidicola str. LL01
          (Acyrthosiphon pisum)]
 gi|311086442|gb|ADP66523.1| 50S ribosomal protein L35 [Buchnera aphidicola str. TLW03
          (Acyrthosiphon pisum)]
 gi|311087024|gb|ADP67104.1| 50S ribosomal protein L35 [Buchnera aphidicola str. JF99
          (Acyrthosiphon pisum)]
 gi|311087590|gb|ADP67669.1| 50S ribosomal protein L35 [Buchnera aphidicola str. JF98
          (Acyrthosiphon pisum)]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF ITA+GK + + A  RH + K++    R+ R  +++++ D  +V +
Sbjct: 1  MPKIKTLKSAAKRFKITASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSTGDMDRV-K 59

Query: 61 NYLPN 65
          ++LP 
Sbjct: 60 SFLPY 64


>gi|52081388|ref|YP_080179.1| 50S ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|52786764|ref|YP_092593.1| 50S ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|319647296|ref|ZP_08001518.1| 50S ribosomal protein L35 [Bacillus sp. BT1B_CT2]
 gi|81690940|sp|Q65GB4|RL35_BACLD RecName: Full=50S ribosomal protein L35
 gi|52004599|gb|AAU24541.1| ribosomal protein L35 [Bacillus licheniformis ATCC 14580]
 gi|52349266|gb|AAU41900.1| RpmI [Bacillus licheniformis ATCC 14580]
 gi|317390643|gb|EFV71448.1| 50S ribosomal protein L35 [Bacillus sp. BT1B_CT2]
          Length = 66

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKSAVVSAGDFKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|158335281|ref|YP_001516453.1| 50S ribosomal protein L35 [Acaryochloris marina MBIC11017]
 gi|189042753|sp|B0BZS9|RL35_ACAM1 RecName: Full=50S ribosomal protein L35
 gi|158305522|gb|ABW27139.1| 50s ribosomal potein L35 [Acaryochloris marina MBIC11017]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  + +GK   + A K H +  +            V++  DA+ V R
Sbjct: 1  MPKLKTRRSAAKRFKRSGSGKFMRRKAYKNHLLEHKGPDRKSRLSKKCVVSEQDAENV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|307107412|gb|EFN55655.1| hypothetical protein CHLNCDRAFT_133856 [Chlorella variabilis]
          Length = 132

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT  ++ KR+ +T +GKV  + AGK+H   K+S K  RN  G MV AS   K +IR  
Sbjct: 67  KLKTRKAAAKRYKVTGSGKVVVRRAGKQHLNEKQSAKTKRNL-GKMVSASESHKNLIRKC 125

Query: 63  LPN 65
           LP 
Sbjct: 126 LPY 128


>gi|242093732|ref|XP_002437356.1| hypothetical protein SORBIDRAFT_10g025480 [Sorghum bicolor]
 gi|241915579|gb|EER88723.1| hypothetical protein SORBIDRAFT_10g025480 [Sorghum bicolor]
          Length = 142

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V    
Sbjct: 73  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNVTGA- 131

Query: 63  LPN 65
           LP 
Sbjct: 132 LPY 134


>gi|313680890|ref|YP_004058629.1| LSU ribosomal protein l35p [Oceanithermus profundus DSM 14977]
 gi|313153605|gb|ADR37456.1| LSU ribosomal protein L35P [Oceanithermus profundus DSM 14977]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K R  +TA GKV A   GKRH    +S K IR+     VLA  +A+++ R
Sbjct: 1  MPKMKTHKGAKGRLKVTARGKVMASKPGKRHLNWHKSGKRIRSKGKKFVLAEGEARRI-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 ELLPY 64


>gi|162459117|ref|NP_001105156.1| prpl35-1 protein [Zea mays]
 gi|28411202|emb|CAD24032.1| putative plastid ribosomal protein L35 [Zea mays]
 gi|28411214|emb|CAD24037.1| putative plastid ribosomal protein L35 [Zea mays]
 gi|194700284|gb|ACF84226.1| unknown [Zea mays]
 gi|195619608|gb|ACG31634.1| 50S ribosomal protein L35 [Zea mays]
          Length = 143

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V    
Sbjct: 74  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNVTGA- 132

Query: 63  LPN 65
           LP 
Sbjct: 133 LPY 135


>gi|261339517|ref|ZP_05967375.1| ribosomal protein L35 [Enterobacter cancerogenus ATCC 35316]
 gi|288318330|gb|EFC57268.1| ribosomal protein L35 [Enterobacter cancerogenus ATCC 35316]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  T  G  + + A  RH + K+S K  R+ R   +++  D   VI 
Sbjct: 1  MPKIKTVRGAAKRFKKTGGGGFKRKHANLRHILTKKSTKRKRHLRPKGLVSKGDLGLVIA 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|325279135|ref|YP_004251677.1| 50S ribosomal protein L35 [Odoribacter splanchnicus DSM 20712]
 gi|324310944|gb|ADY31497.1| 50S ribosomal protein L35 [Odoribacter splanchnicus DSM 20712]
          Length = 64

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF++TATGK++ + A K H + K++ K  RN      +   + K V +
Sbjct: 1  MPKMKTVSSAKKRFTLTATGKIKRKHAFKSHILTKKTTKQKRNLTHVTTVDGHNLKAVRK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|225629869|ref|ZP_03787775.1| ribosomal protein L35 [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
 gi|225591277|gb|EEH12411.1| ribosomal protein L35 [Wolbachia endosymbiont of Muscidifurax
          uniraptor]
          Length = 68

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ +
Sbjct: 5  KLKTRSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILGKSDS-RIVKLH 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|42520699|ref|NP_966614.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          melanogaster]
 gi|58698331|ref|ZP_00373247.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|99036097|ref|ZP_01315130.1| hypothetical protein Wendoof_01000020 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
 gi|225630567|ref|YP_002727358.1| ribosomal protein L35 [Wolbachia sp. wRi]
 gi|54036273|sp|Q73GR8|RL35_WOLPM RecName: Full=50S ribosomal protein L35
 gi|254803640|sp|C0R3S5|RL35_WOLWR RecName: Full=50S ribosomal protein L35
 gi|42410439|gb|AAS14548.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          melanogaster]
 gi|58535155|gb|EAL59238.1| ribosomal protein L35 [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|225592548|gb|ACN95567.1| ribosomal protein L35 [Wolbachia sp. wRi]
          Length = 68

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT SS KKRF +TA GKV +  +GKRHGM+KRS   IRN RGT +L  +D+ ++++ +
Sbjct: 5  KLKTKSSVKKRFHLTAKGKVISTQSGKRHGMVKRSKSNIRNQRGTTILGKSDS-RIVKLH 63

Query: 63 LPNGI 67
          +P GI
Sbjct: 64 MPYGI 68


>gi|284033333|ref|YP_003383264.1| 50S ribosomal protein L35 [Kribbella flavida DSM 17836]
 gi|283812626|gb|ADB34465.1| ribosomal protein L35 [Kribbella flavida DSM 17836]
          Length = 64

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S  KKR  IT +GK+R +  G RH    +S+K  R   GT+ +A +  KK  +
Sbjct: 1  MPKMKTHSGMKKRVRITGSGKIRREQTGIRHLAEAKSSKRKRRLSGTVEVAPSYVKKAKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|169858154|ref|XP_001835723.1| hypothetical protein CC1G_07147 [Coprinopsis cinerea okayama7#130]
 gi|116503173|gb|EAU86068.1| hypothetical protein CC1G_07147 [Coprinopsis cinerea okayama7#130]
          Length = 106

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 3   KMKTNSSSKKRFSITATGK-VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
           K+K++S +KKR+    +G   +   AG  H    +S +       T       A  + + 
Sbjct: 40  KLKSHSGAKKRWRSLGSGTAFKRGKAGHSHLNAHKSAERKNRLSQTAYANPTQAANLRKR 99

Query: 62  YLPNG 66
            LP G
Sbjct: 100 LLPYG 104


>gi|283797708|ref|ZP_06346861.1| ribosomal protein L35 [Clostridium sp. M62/1]
 gi|291074604|gb|EFE11968.1| ribosomal protein L35 [Clostridium sp. M62/1]
 gi|295092066|emb|CBK78173.1| LSU ribosomal protein L35P [Clostridium cf. saccharolyticum K10]
 gi|295115132|emb|CBL35979.1| LSU ribosomal protein L35P [butyrate-producing bacterium SM4/1]
          Length = 65

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TGK+    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKMKTSRAAAKRFKTTGTGKLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNAKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|193215698|ref|YP_001996897.1| 50S ribosomal protein L35 [Chloroherpeton thalassium ATCC 35110]
 gi|226724982|sp|B3QUU9|RL35_CHLT3 RecName: Full=50S ribosomal protein L35
 gi|193089175|gb|ACF14450.1| ribosomal protein L35 [Chloroherpeton thalassium ATCC 35110]
          Length = 64

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF +T +GKV+ +     H + K+S K  RN   + ++ ++  K V R
Sbjct: 1  MPKMKSHRGACKRFKVTGSGKVKREKMNASHILEKKSRKRKRNLHQSTLVDASQEKTVKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|118602647|ref|YP_903862.1| 50S ribosomal protein L35 [Candidatus Ruthia magnifica str. Cm
          (Calyptogena magnifica)]
 gi|118567586|gb|ABL02391.1| LSU ribosomal protein L35P [Candidatus Ruthia magnifica str. Cm
          (Calyptogena magnifica)]
          Length = 66

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S+   RN R   ++  AD   ++R
Sbjct: 2  MPKLKTNKGAAKRFKKTASGGYKCKHSHLRHILTKKSSSRKRNLRAPDMVEKADVA-MVR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 KMLPY 65


>gi|218247396|ref|YP_002372767.1| 50S ribosomal protein L35 [Cyanothece sp. PCC 8801]
 gi|257061270|ref|YP_003139158.1| 50S ribosomal protein L35 [Cyanothece sp. PCC 8802]
 gi|226724992|sp|B7K4V5|RL35_CYAP8 RecName: Full=50S ribosomal protein L35
 gi|218167874|gb|ACK66611.1| ribosomal protein L35 [Cyanothece sp. PCC 8801]
 gi|256591436|gb|ACV02323.1| ribosomal protein L35 [Cyanothece sp. PCC 8802]
          Length = 67

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T +G K+  + A K H +  +S++   R   G  +++  D   V
Sbjct: 1  MPKLKTRKAAAKRFRVTGSGKKIFRRKAFKNHLLQHKSSERKFRRLSGLSLVSEQDEANV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|320449909|ref|YP_004202005.1| 50S ribosomal protein L35 [Thermus scotoductus SA-01]
 gi|320150077|gb|ADW21455.1| 50S ribosomal protein L35 [Thermus scotoductus SA-01]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +TA+GKV A   GKRH    +S K IR       LA A+A+++ +
Sbjct: 1  MPKMKTHKGAKKRVKVTASGKVMAMKTGKRHLNWHKSGKTIRQKGRKFALAQAEAERI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LLLPY 64


>gi|157693291|ref|YP_001487753.1| 50S ribosomal protein L35 [Bacillus pumilus SAFR-032]
 gi|194017121|ref|ZP_03055733.1| ribosomal protein L35 [Bacillus pumilus ATCC 7061]
 gi|166988032|sp|A8FG26|RL35_BACP2 RecName: Full=50S ribosomal protein L35
 gi|157682049|gb|ABV63193.1| ribosomal protein L35 [Bacillus pumilus SAFR-032]
 gi|194010989|gb|EDW20559.1| ribosomal protein L35 [Bacillus pumilus ATCC 7061]
          Length = 66

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + ++++ D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKSAIVSAGDFKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|308049559|ref|YP_003913125.1| 50S ribosomal protein L35P [Ferrimonas balearica DSM 9799]
 gi|307631749|gb|ADN76051.1| LSU ribosomal protein L35P [Ferrimonas balearica DSM 9799]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+G  + + +  RH + K+S K  R+ R   ++A  D   V R
Sbjct: 1  MPKMKSHRGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRAAAMVAKVDVASVQR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|115469208|ref|NP_001058203.1| Os06g0647100 [Oryza sativa Japonica Group]
 gi|51535422|dbj|BAD37321.1| putative 50S ribosomal protein L35 [Oryza sativa Japonica Group]
 gi|51535644|dbj|BAD37618.1| putative 50S ribosomal protein L35 [Oryza sativa Japonica Group]
 gi|113596243|dbj|BAF20117.1| Os06g0647100 [Oryza sativa Japonica Group]
 gi|125556272|gb|EAZ01878.1| hypothetical protein OsI_23900 [Oryza sativa Indica Group]
 gi|125598039|gb|EAZ37819.1| hypothetical protein OsJ_22158 [Oryza sativa Japonica Group]
 gi|215694957|dbj|BAG90148.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 146

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V
Sbjct: 77  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLSKKNTKRRKRLSKMIQVNKSDYNNV 132


>gi|162447700|ref|YP_001620832.1| 50S ribosomal protein L35 [Acholeplasma laidlawii PG-8A]
 gi|189042754|sp|A9NGH6|RL35_ACHLI RecName: Full=50S ribosomal protein L35
 gi|161985807|gb|ABX81456.1| large subunit ribosomal protein L35 [Acholeplasma laidlawii
          PG-8A]
          Length = 66

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S  KKR  ITATGK+    A   H    ++ K  R       + + DAK++ R
Sbjct: 1  MPKQKTHSGLKKRIKITATGKLMRHQAYSNHLAASKTTKQNRQLSAETTVHATDAKRIKR 60


>gi|225389793|ref|ZP_03759517.1| hypothetical protein CLOSTASPAR_03541 [Clostridium asparagiforme
          DSM 15981]
 gi|225044151|gb|EEG54397.1| hypothetical protein CLOSTASPAR_03541 [Clostridium asparagiforme
          DSM 15981]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R   ++  A   +V++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNAQVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|126698265|ref|YP_001087162.1| 50S ribosomal protein L35 [Clostridium difficile 630]
 gi|254974300|ref|ZP_05270772.1| 50S ribosomal protein L35 [Clostridium difficile QCD-66c26]
 gi|255091697|ref|ZP_05321175.1| 50S ribosomal protein L35 [Clostridium difficile CIP 107932]
 gi|255099798|ref|ZP_05328775.1| 50S ribosomal protein L35 [Clostridium difficile QCD-63q42]
 gi|255305683|ref|ZP_05349855.1| 50S ribosomal protein L35 [Clostridium difficile ATCC 43255]
 gi|255313425|ref|ZP_05355008.1| 50S ribosomal protein L35 [Clostridium difficile QCD-76w55]
 gi|255516112|ref|ZP_05383788.1| 50S ribosomal protein L35 [Clostridium difficile QCD-97b34]
 gi|255649208|ref|ZP_05396110.1| 50S ribosomal protein L35 [Clostridium difficile QCD-37x79]
 gi|260682383|ref|YP_003213668.1| 50S ribosomal protein L35 [Clostridium difficile CD196]
 gi|260685982|ref|YP_003217115.1| 50S ribosomal protein L35 [Clostridium difficile R20291]
 gi|306519312|ref|ZP_07405659.1| 50S ribosomal protein L35 [Clostridium difficile QCD-32g58]
 gi|118573001|sp|Q189N0|RL35_CLOD6 RecName: Full=50S ribosomal protein L35
 gi|115249702|emb|CAJ67519.1| 50S ribosomal protein L35 [Clostridium difficile]
 gi|260208546|emb|CBA61207.1| 50S ribosomal protein L35 [Clostridium difficile CD196]
 gi|260211998|emb|CBE02532.1| 50S ribosomal protein L35 [Clostridium difficile R20291]
          Length = 64

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T TGK++   A K+H + K+S K   N R + +++  DAK++  
Sbjct: 1  MPKMKTHRGAAKRLKKTGTGKLKRAKAFKKHILTKKSAKTKMNLRKSTLVSDGDAKRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|226954302|ref|ZP_03824766.1| 50S ribosomal protein L35 [Acinetobacter sp. ATCC 27244]
 gi|262374313|ref|ZP_06067589.1| ribosomal protein L35 [Acinetobacter junii SH205]
 gi|294649371|ref|ZP_06726802.1| 50S ribosomal protein L35 [Acinetobacter haemolyticus ATCC 19194]
 gi|226834973|gb|EEH67356.1| 50S ribosomal protein L35 [Acinetobacter sp. ATCC 27244]
 gi|262310871|gb|EEY91959.1| ribosomal protein L35 [Acinetobacter junii SH205]
 gi|292824741|gb|EFF83513.1| 50S ribosomal protein L35 [Acinetobacter haemolyticus ATCC 19194]
          Length = 64

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT   + KRF  TA G  + + A KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MAKLKTRRGAAKRFKATANG-FKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDVASV-R 58

Query: 61 NYLPN 65
             P 
Sbjct: 59 AMCPY 63


>gi|254447204|ref|ZP_05060671.1| ribosomal protein L35 [gamma proteobacterium HTCC5015]
 gi|198263343|gb|EDY87621.1| ribosomal protein L35 [gamma proteobacterium HTCC5015]
          Length = 66

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +T  G+V+   + +RH + K+S K  R+ R  +          ++
Sbjct: 1  MPKMKTNRGAAKRFRVTGKGQVKRAQSHRRHILTKKSTKRKRHLRSDIQRIHKVDVPSVK 60

Query: 61 NYLPN 65
          + LP 
Sbjct: 61 SMLPY 65


>gi|187929055|ref|YP_001899542.1| 50S ribosomal protein L35 [Ralstonia pickettii 12J]
 gi|241663241|ref|YP_002981601.1| 50S ribosomal protein L35 [Ralstonia pickettii 12D]
 gi|309782529|ref|ZP_07677252.1| ribosomal protein L35 [Ralstonia sp. 5_7_47FAA]
 gi|226725053|sp|B2UGJ6|RL35_RALPJ RecName: Full=50S ribosomal protein L35
 gi|187725945|gb|ACD27110.1| ribosomal protein L35 [Ralstonia pickettii 12J]
 gi|240865268|gb|ACS62929.1| ribosomal protein L35 [Ralstonia pickettii 12D]
 gi|308918620|gb|EFP64294.1| ribosomal protein L35 [Ralstonia sp. 5_7_47FAA]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF+    G ++   A KRH + K++ K  R+ RGT  +   + K V R
Sbjct: 1  MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|113475549|ref|YP_721610.1| 50S ribosomal protein L35 [Trichodesmium erythraeum IMS101]
 gi|123352383|sp|Q114D7|RL35_TRIEI RecName: Full=50S ribosomal protein L35
 gi|110166597|gb|ABG51137.1| LSU ribosomal protein L35P [Trichodesmium erythraeum IMS101]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ +RF  T +GK++ + A K H +  +S+    N   T ++   + + V R
Sbjct: 1  MPKLKTRKAAARRFKATGSGKIKRRKAFKSHLLEHKSSTRKNNLSKTTLVHKTNEENV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMIPY 64


>gi|150024983|ref|YP_001295809.1| 50S ribosomal protein L35 [Flavobacterium psychrophilum JIP02/86]
 gi|166231184|sp|A6GY20|RL35_FLAPJ RecName: Full=50S ribosomal protein L35
 gi|149771524|emb|CAL42993.1| 50S ribosomal protein L35 [Flavobacterium psychrophilum JIP02/86]
          Length = 65

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K       + ++ + D K + +
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKKRKLALTHSALVHATDMKSIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|220906897|ref|YP_002482208.1| 50S ribosomal protein L35 [Cyanothece sp. PCC 7425]
 gi|254802446|sp|B8HPI6|RL35_CYAP4 RecName: Full=50S ribosomal protein L35
 gi|219863508|gb|ACL43847.1| ribosomal protein L35 [Cyanothece sp. PCC 7425]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK   + A + H +  +S           ++   D ++V  
Sbjct: 1  MPKLKTRKAAAKRFRQTGTGKFTRRKANRNHLLEHKSTARKNKLSHMAIVDERDEERVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|22299702|ref|NP_682949.1| 50S ribosomal protein L35 [Thermosynechococcus elongatus BP-1]
 gi|34222857|sp|Q8DH01|RL35_THEEB RecName: Full=50S ribosomal protein L35
 gi|22295886|dbj|BAC09711.1| 50S ribosomal protein L35 [Thermosynechococcus elongatus BP-1]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T +GK   + A K H +  + +          ++   D ++V  
Sbjct: 1  MPKLKTRRAAAKRFRTTGSGKFVRRKANKNHLLEHKGSDRKNRLSHKALVDPRDVERVS- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|284929714|ref|YP_003422236.1| 50S ribosomal protein L35P [cyanobacterium UCYN-A]
 gi|284810158|gb|ADB95855.1| LSU ribosomal protein L35P [cyanobacterium UCYN-A]
          Length = 67

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T +G K+  + A K H +  +S++   R    T +++  D   V
Sbjct: 1  MPKLKTRKAAAKRFRVTGSGKKIVRRKAYKNHLLNHKSSEQKRRRLSQTALVSEQDEPNV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|239905699|ref|YP_002952438.1| 50S ribosomal protein L35 [Desulfovibrio magneticus RS-1]
 gi|259647351|sp|C4XL13|RL35_DESMR RecName: Full=50S ribosomal protein L35
 gi|239795563|dbj|BAH74552.1| 50S ribosomal protein L35 [Desulfovibrio magneticus RS-1]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF  T +GK   +    RH + K+S K  R      ++ SA+ K V R
Sbjct: 1  MPKMKTNRSAAKRFGKTGSGKFTRRRQNLRHILTKKSAKRTRRLGQGALVDSANVKAVSR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|254411709|ref|ZP_05025485.1| ribosomal protein L35 [Microcoleus chthonoplastes PCC 7420]
 gi|196181431|gb|EDX76419.1| ribosomal protein L35 [Microcoleus chthonoplastes PCC 7420]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+  ++ KRF  T  GK+R + A K H + ++++   R      ++   DA  V R
Sbjct: 1  MPKLKSRRAAAKRFRPTGNGKIRRRKAFKSHLLERKNSGRKRRLSKLSLVNERDADNV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|154687020|ref|YP_001422181.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens FZB42]
 gi|308174582|ref|YP_003921287.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens DSM 7]
 gi|166231155|sp|A7Z7H4|RL35_BACA2 RecName: Full=50S ribosomal protein L35
 gi|154352871|gb|ABS74950.1| RpmI [Bacillus amyloliquefaciens FZB42]
 gi|307607446|emb|CBI43817.1| ribosomal protein L35 [Bacillus amyloliquefaciens DSM 7]
 gi|328554505|gb|AEB24997.1| 50S ribosomal protein L35 [Bacillus amyloliquefaciens TA208]
          Length = 66

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R   ++++ D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKGAIVSAGDFKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|237669094|ref|ZP_04529078.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E
          BL5262]
 gi|237657442|gb|EEP54998.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E
          BL5262]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T TGK++   A K H + K+S+K  RN R    +  A  +KV++
Sbjct: 1  MPKMKSHRGAAKRFRKTGTGKLKRAKAFKSHILTKKSSKTKRNLRKAGYVCKA-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|255654727|ref|ZP_05400136.1| 50S ribosomal protein L35 [Clostridium difficile QCD-23m63]
 gi|296449470|ref|ZP_06891250.1| 50S ribosomal protein L35 [Clostridium difficile NAP08]
 gi|296878207|ref|ZP_06902219.1| 50S ribosomal protein L35 [Clostridium difficile NAP07]
 gi|296261709|gb|EFH08524.1| 50S ribosomal protein L35 [Clostridium difficile NAP08]
 gi|296430776|gb|EFH16611.1| 50S ribosomal protein L35 [Clostridium difficile NAP07]
          Length = 64

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T TGK++   A K+H + K+S K   N R + +++  DAK++  
Sbjct: 1  MPKMKTHRGAAKRLKKTGTGKLKRAKAYKKHILTKKSAKTKMNLRKSTLVSDGDAKRIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 QLLPY 64


>gi|224367575|ref|YP_002601738.1| RpmI [Desulfobacterium autotrophicum HRM2]
 gi|259647350|sp|C0QHL6|RL35_DESAH RecName: Full=50S ribosomal protein L35
 gi|223690291|gb|ACN13574.1| RpmI [Desulfobacterium autotrophicum HRM2]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T +GK + + A   H + K++ K  R+ R   ++ ++D K+V R
Sbjct: 1  MPKIKTNRAAAKRFKKTGSGKYKFRKANASHILTKKTTKRKRSLRLDQIIGASDLKEVKR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -LLPNG 65


>gi|120434967|ref|YP_860653.1| 50S ribosomal protein L35 [Gramella forsetii KT0803]
 gi|166231189|sp|A0LYZ1|RL35_GRAFK RecName: Full=50S ribosomal protein L35
 gi|117577117|emb|CAL65586.1| 50S rbosomal protein L35 [Gramella forsetii KT0803]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K       + ++  AD   V  
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHSTLVHDADKDNVKL 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|145594426|ref|YP_001158723.1| ribosomal protein L35 [Salinispora tropica CNB-440]
 gi|189042785|sp|A4X645|RL35_SALTO RecName: Full=50S ribosomal protein L35
 gi|145303763|gb|ABP54345.1| LSU ribosomal protein L35P [Salinispora tropica CNB-440]
          Length = 64

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+++   KR  +T  GK+  Q AG RH + K+S+   R   G + +A  D K++ +
Sbjct: 1  MPKMKSHTGMGKRVRVTGKGKIVKQQAGLRHNLEKKSSTRTRRLTGLVEVAKPDVKRIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|146297792|ref|YP_001192383.1| 50S ribosomal protein L35 [Flavobacterium johnsoniae UW101]
 gi|189042769|sp|A5FP03|RL35_FLAJO RecName: Full=50S ribosomal protein L35
 gi|146152210|gb|ABQ03064.1| LSU ribosomal protein L35P [Flavobacterium johnsoniae UW101]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T +GK++ + A K H + K+S K       + ++   D K + +
Sbjct: 1  MPKMKTKSSAKKRFKVTGSGKIKRKHAFKSHILTKKSKKRKLALTHSALVHKTDEKSIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|261415202|ref|YP_003248885.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
 gi|261371658|gb|ACX74403.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
 gi|302327303|gb|ADL26504.1| ribosomal protein L35 [Fibrobacter succinogenes subsp.
          succinogenes S85]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +KKRF +T +G V+ + AG RH   K + K  RN R   ++   D   V R
Sbjct: 1  MPKMKTHSGAKKRFRVTGSGHVKFKRAGMRHIQAKMNTKRKRNLRKGALVKKVDTYHVKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|332885362|gb|EGK05611.1| 50S ribosomal protein L35 [Dysgonomonas mossii DSM 22836]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTNS +KKRF++T TGK++ + A K H + K++ K  RN   T  ++  D K V +
Sbjct: 1  MPKKKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRNLTHTTTVSKVDEKSVKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|317131312|ref|YP_004090626.1| ribosomal protein L35 [Ethanoligenens harbinense YUAN-3]
 gi|315469291|gb|ADU25895.1| ribosomal protein L35 [Ethanoligenens harbinense YUAN-3]
          Length = 66

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KR   T TGK++   A K H + K+  K  R  R      + +    ++
Sbjct: 1  MPKLKTHSGASKRLRFTKTGKIKRAHAFKSHILNKKDTKRKRGLRQAAYADATNVG-ALK 59

Query: 61 NYLPN 65
          +  P 
Sbjct: 60 HLCPY 64


>gi|85711634|ref|ZP_01042691.1| Ribosomal protein L35 [Idiomarina baltica OS145]
 gi|85694494|gb|EAQ32435.1| Ribosomal protein L35 [Idiomarina baltica OS145]
          Length = 65

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA+G  + + +  RH + K++ K  R  R   ++  AD K V R
Sbjct: 1  MPKMKSNKGASKRFKKTASGGYKCKQSHLRHILTKKTPKRKRQLRAKSMVHEADVKLVDR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|332798666|ref|YP_004460165.1| 50S ribosomal protein L35 [Tepidanaerobacter sp. Re1]
 gi|332696401|gb|AEE90858.1| 50S ribosomal protein L35 [Tepidanaerobacter sp. Re1]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T TGK++   A K H + K+++K  R+ R   +L+ AD K++ +
Sbjct: 1  MPKVKTHRGAAKRFKVTKTGKIKRSKAYKSHILTKKTSKRKRHLRKPAILSKADHKRI-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 QVIPY 64


>gi|289523102|ref|ZP_06439956.1| ribosomal protein L35 [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289503645|gb|EFD24809.1| ribosomal protein L35 [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 68

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ITATGKV  +   + H + K++ K IR  +    L  A A+K+ +
Sbjct: 3  MPKIKTHSGAKKRFKITATGKVAYKKVNRGHLLRKKNQKRIRALKQKGYLDEAFARKI-K 61

Query: 61 NYLPN 65
            +P 
Sbjct: 62 QLMPY 66


>gi|320539027|ref|ZP_08038702.1| 50S ribosomal subunit protein L35 [Serratia symbiotica str.
          Tucson]
 gi|320030960|gb|EFW12964.1| 50S ribosomal subunit protein L35 [Serratia symbiotica str.
          Tucson]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  T +G  + + A  RH + K++ K  R+ R   +++ +D   VI 
Sbjct: 1  MPKIKTVRGAAKRFKKTGSGGFKRKHANLRHILTKKATKRKRHLRPKGLVSKSDLVLVIA 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|300856608|ref|YP_003781592.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
 gi|300436723|gb|ADK16490.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KRF IT TGK++   A K H + K+S K  RN R   +++    +K+++
Sbjct: 1  MPKMKTKRSVAKRFKITGTGKLKRSKAFKSHILTKKSAKTKRNLRKAGLVSET-QEKIMK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KLMPY 64


>gi|126697189|ref|YP_001092075.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9301]
 gi|254526079|ref|ZP_05138131.1| ribosomal protein L35 [Prochlorococcus marinus str. MIT 9202]
 gi|166199816|sp|A3PFE9|RL35_PROM0 RecName: Full=50S ribosomal protein L35
 gi|126544232|gb|ABO18474.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9301]
 gi|221537503|gb|EEE39956.1| ribosomal protein L35 [Prochlorococcus marinus str. MIT 9202]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V +
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAFHNHLLDHKSSKLKRHLSTKAVVDERDADNV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMIPY 64


>gi|78486006|ref|YP_391931.1| 50S ribosomal protein L35 [Thiomicrospira crunogena XCL-2]
 gi|148887124|sp|Q31F16|RL35_THICR RecName: Full=50S ribosomal protein L35
 gi|78364292|gb|ABB42257.1| LSU ribosomal protein L35P [Thiomicrospira crunogena XCL-2]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S++KRF  T +G+ + + +  RH + K+S K  R+ R   ++   D   ++R
Sbjct: 1  MPKMKTNKSAQKRFKKTGSGRFKCKQSHLRHILTKKSTKRKRHLRAASMIHDNDVA-MVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 RMLPY 64


>gi|297588371|ref|ZP_06947014.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 53516]
 gi|297573744|gb|EFH92465.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 53516]
          Length = 63

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+R   A   H   K+S K IRN R    ++ AD +++ +
Sbjct: 1  MPKMKTHRGSAKRFRRTGTGKLRRYKAYASHLTGKKSAKRIRNLRKGTTVSDADMRRIDK 60


>gi|323484403|ref|ZP_08089769.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14163]
 gi|323692414|ref|ZP_08106650.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14673]
 gi|323402181|gb|EGA94513.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14163]
 gi|323503554|gb|EGB19380.1| 50S ribosomal protein L35 [Clostridium symbiosum WAL-14673]
          Length = 65

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TGK+    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKMKTSRAAAKRFKTTGTGKLVRSKAYKSHILTKKSTKRKRNLRKD-IVTDATNSKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|84393195|ref|ZP_00991958.1| 50S ribosomal protein L35 [Vibrio splendidus 12B01]
 gi|84376161|gb|EAP93046.1| 50S ribosomal protein L35 [Vibrio splendidus 12B01]
          Length = 64

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + AGKRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFQKTAGG-IKFKHAGKRHILTKRTTKNKRQLRPNSILPKCEVAAVLR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|28869577|ref|NP_792196.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato str.
          DC3000]
 gi|66045404|ref|YP_235245.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae
          B728a]
 gi|70729483|ref|YP_259221.1| 50S ribosomal protein L35 [Pseudomonas fluorescens Pf-5]
 gi|71735557|ref|YP_274356.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. phaseolicola
          1448A]
 gi|77458160|ref|YP_347665.1| 50S ribosomal protein L35 [Pseudomonas fluorescens Pf0-1]
 gi|213970493|ref|ZP_03398620.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato T1]
 gi|229591577|ref|YP_002873696.1| 50S ribosomal protein L35 [Pseudomonas fluorescens SBW25]
 gi|237801013|ref|ZP_04589474.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. oryzae str.
          1_6]
 gi|257486170|ref|ZP_05640211.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tabaci ATCC
          11528]
 gi|289623634|ref|ZP_06456588.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          NCPPB3681]
 gi|289647148|ref|ZP_06478491.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          2250]
 gi|289673300|ref|ZP_06494190.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae FF5]
 gi|298486703|ref|ZP_07004760.1| LSU ribosomal protein L35p [Pseudomonas savastanoi pv. savastanoi
          NCPPB 3335]
 gi|301384176|ref|ZP_07232594.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato Max13]
 gi|302062684|ref|ZP_07254225.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato K40]
 gi|302132641|ref|ZP_07258631.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato NCPPB
          1108]
 gi|302187615|ref|ZP_07264288.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. syringae 642]
 gi|312961941|ref|ZP_07776438.1| 50S ribosomal protein L35 [Pseudomonas fluorescens WH6]
 gi|330810591|ref|YP_004355053.1| 50S ribosomal protein L35 [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
 gi|60393718|sp|P0A163|RL35_PSESM RecName: Full=50S ribosomal protein L35
 gi|60393719|sp|P0A164|RL35_PSESY RecName: Full=50S ribosomal protein L35
 gi|81308307|sp|Q4ZUG5|RL35_PSEU2 RecName: Full=50S ribosomal protein L35
 gi|126352247|sp|Q3KEY0|RL35_PSEPF RecName: Full=50S ribosomal protein L35
 gi|148887093|sp|Q48JS1|RL35_PSE14 RecName: Full=50S ribosomal protein L35
 gi|148887094|sp|Q4KEW2|RL35_PSEF5 RecName: Full=50S ribosomal protein L35
 gi|259647361|sp|C3JZN5|RL35_PSEFS RecName: Full=50S ribosomal protein L35
 gi|4972785|gb|AAD34788.1|AF136400_2 ribosomal protein L35 [Pseudomonas fluorescens]
 gi|1171433|gb|AAB05015.1| ribosomal protein L35 [Pseudomonas syringae pv. syringae]
 gi|28852819|gb|AAO55891.1| ribosomal protein L35 [Pseudomonas syringae pv. tomato str.
          DC3000]
 gi|63256111|gb|AAY37207.1| Ribosomal protein L35 [Pseudomonas syringae pv. syringae B728a]
 gi|68343782|gb|AAY91388.1| ribosomal protein L35 [Pseudomonas fluorescens Pf-5]
 gi|71556110|gb|AAZ35321.1| ribosomal protein L35 [Pseudomonas syringae pv. phaseolicola
          1448A]
 gi|77382163|gb|ABA73676.1| putative 50S ribosomal protein L35 [Pseudomonas fluorescens
          Pf0-1]
 gi|213924664|gb|EEB58232.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tomato T1]
 gi|229363443|emb|CAY50641.1| putative 50S ribosomal protein L35 [Pseudomonas fluorescens
          SBW25]
 gi|298158786|gb|EFH99849.1| LSU ribosomal protein L35p [Pseudomonas savastanoi pv. savastanoi
          NCPPB 3335]
 gi|311283751|gb|EFQ62335.1| 50S ribosomal protein L35 [Pseudomonas fluorescens WH6]
 gi|320324304|gb|EFW80383.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          B076]
 gi|320328574|gb|EFW84576.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          race 4]
 gi|327378699|gb|AEA70049.1| putative 50S ribosomal protein L35 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|330867697|gb|EGH02406.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aesculi str.
          0893_23]
 gi|330876791|gb|EGH10940.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. morsprunorum
          str. M302280PT]
 gi|330885568|gb|EGH19717.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. glycinea str.
          race 4]
 gi|330943373|gb|EGH45742.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. pisi str.
          1704B]
 gi|330951868|gb|EGH52128.1| 50S ribosomal protein L35 [Pseudomonas syringae Cit 7]
 gi|330967296|gb|EGH67556.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. actinidiae
          str. M302091]
 gi|330973949|gb|EGH74015.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aceris str.
          M302273PT]
 gi|330977711|gb|EGH77614.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. aptata str.
          DSM 50252]
 gi|330989239|gb|EGH87342.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. lachrymans
          str. M301315]
 gi|331010500|gb|EGH90556.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. tabaci ATCC
          11528]
 gi|331016137|gb|EGH96193.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. lachrymans
          str. M302278PT]
 gi|331023870|gb|EGI03927.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. oryzae str.
          1_6]
          Length = 64

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K S K  R  RG+ +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTANG-IKHKHAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|132918|sp|P23326|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
           Full=CL35; Flags: Precursor
 gi|189096153|pdb|3BBO|5 Chain 5, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
 gi|170139|gb|AAA34043.1| ribosomal protein L35 [Spinacia oleracea]
          Length = 159

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K        + +  +D   VI   
Sbjct: 91  KMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKNRLSKLIQVDRSDYDNVIGA- 149

Query: 63  LPN 65
           LP 
Sbjct: 150 LPY 152


>gi|85059398|ref|YP_455100.1| 50S ribosomal protein L35 [Sodalis glossinidius str. 'morsitans']
 gi|148887110|sp|Q2NT30|RL35_SODGM RecName: Full=50S ribosomal protein L35
 gi|84779918|dbj|BAE74695.1| 50S ribosomal protein L35 [Sodalis glossinidius str. 'morsitans']
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+R
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKSMVSKGDLGLVVR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|188533975|ref|YP_001907772.1| 50S ribosomal protein L35 [Erwinia tasmaniensis Et1/99]
 gi|259908576|ref|YP_002648932.1| 50S ribosomal protein L35 [Erwinia pyrifoliae Ep1/96]
 gi|291617249|ref|YP_003519991.1| RpmI [Pantoea ananatis LMG 20103]
 gi|292488131|ref|YP_003531008.1| 50S ribosomal protein L35 [Erwinia amylovora CFBP1430]
 gi|292899342|ref|YP_003538711.1| 50S ribosomal protein L35 [Erwinia amylovora ATCC 49946]
 gi|300716460|ref|YP_003741263.1| 50S ribosomal protein L35 [Erwinia billingiae Eb661]
 gi|300722780|ref|YP_003712071.1| 50S ribosomal subunit protein A [Xenorhabdus nematophila ATCC
          19061]
 gi|304397618|ref|ZP_07379495.1| ribosomal protein L35 [Pantoea sp. aB]
 gi|308186648|ref|YP_003930779.1| 50S ribosomal protein L35 [Pantoea vagans C9-1]
 gi|226725009|sp|B2VEL8|RL35_ERWT9 RecName: Full=50S ribosomal protein L35
 gi|188029017|emb|CAO96885.1| 50S ribosomal protein L35 [Erwinia tasmaniensis Et1/99]
 gi|224964198|emb|CAX55705.1| 50S ribosomal protein L35 [Erwinia pyrifoliae Ep1/96]
 gi|283478545|emb|CAY74461.1| 50S ribosomal protein L35 [Erwinia pyrifoliae DSM 12163]
 gi|291152279|gb|ADD76863.1| RpmI [Pantoea ananatis LMG 20103]
 gi|291199190|emb|CBJ46304.1| 50S ribosomal subunit protein L35 [Erwinia amylovora ATCC 49946]
 gi|291553555|emb|CBA20600.1| 50S ribosomal protein L35 [Erwinia amylovora CFBP1430]
 gi|297629288|emb|CBJ89887.1| 50S ribosomal subunit protein A [Xenorhabdus nematophila ATCC
          19061]
 gi|299062296|emb|CAX59413.1| 50S ribosomal protein L35 [Erwinia billingiae Eb661]
 gi|304354790|gb|EFM19160.1| ribosomal protein L35 [Pantoea sp. aB]
 gi|308057158|gb|ADO09330.1| 50S ribosomal protein L35 [Pantoea vagans C9-1]
 gi|310767524|gb|ADP12474.1| 50S ribosomal protein L35 [Erwinia sp. Ejp617]
 gi|312172263|emb|CBX80520.1| 50S ribosomal protein L35 [Erwinia amylovora ATCC BAA-2158]
 gi|327393703|dbj|BAK11125.1| 50S ribosomal protein L35 RpmI [Pantoea ananatis AJ13355]
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVI 59


>gi|326795750|ref|YP_004313570.1| 50S ribosomal protein L35 [Marinomonas mediterranea MMB-1]
 gi|326546514|gb|ADZ91734.1| 50S ribosomal protein L35 [Marinomonas mediterranea MMB-1]
          Length = 64

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + +   H + K+S K  R  R    +A+ D   ++R
Sbjct: 1  MPKIKSNSGAAKRFKRTANG-FKHKQSFTSHILTKKSTKRKRQLRSMNQVAACDKPLIVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|159037499|ref|YP_001536752.1| ribosomal protein L35 [Salinispora arenicola CNS-205]
 gi|189042782|sp|A8LY44|RL35_SALAI RecName: Full=50S ribosomal protein L35
 gi|157916334|gb|ABV97761.1| ribosomal protein L35 [Salinispora arenicola CNS-205]
          Length = 64

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+++   KR  +T  GK+  Q AG RH + K+ +   R   G + +A  D K++ +
Sbjct: 1  MPKMKSHTGMGKRVRVTGKGKIVKQQAGLRHNLEKKPSTRTRRLTGLVEVAKPDVKRIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|78780138|ref|YP_398250.1| 50S ribosomal protein L35 [Prochlorococcus marinus str. MIT 9312]
 gi|124078997|sp|Q317Y1|RL35_PROM9 RecName: Full=50S ribosomal protein L35
 gi|78713637|gb|ABB50814.1| LSU ribosomal protein L35P [Prochlorococcus marinus str. MIT
          9312]
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+     V+   DA  V +
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFMRRRAYHNHLLDHKSSKLKRHLSTKAVVDERDADNV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMIPY 64


>gi|291544307|emb|CBL17416.1| LSU ribosomal protein L35P [Ruminococcus sp. 18P13]
          Length = 67

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T +GKV+ Q   KRH + ++  K  R ARG  +    +A  + +  
Sbjct: 5  KVKTHSGAKKRFKVTGSGKVKYQHTNKRHRLTQKDTKRKRIARGAGICDCTNAPTIKK-L 63

Query: 63 LPN 65
          +P 
Sbjct: 64 VPY 66


>gi|240146872|ref|ZP_04745473.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
 gi|257200970|gb|EEU99254.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
 gi|291536061|emb|CBL09173.1| LSU ribosomal protein L35P [Roseburia intestinalis M50/1]
 gi|291538554|emb|CBL11665.1| LSU ribosomal protein L35P [Roseburia intestinalis XB6B4]
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K + +
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRKPAIVDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|319954101|ref|YP_004165368.1| lsu ribosomal protein l35p [Cellulophaga algicola DSM 14237]
 gi|319422761|gb|ADV49870.1| LSU ribosomal protein L35P [Cellulophaga algicola DSM 14237]
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT SS+KKRF +T +GK++ + A K H + K+S K       + ++  AD   +  
Sbjct: 1  MPKQKTKSSAKKRFKLTGSGKIKRKHAFKSHILTKKSKKRKLALTHSGLVHQADVNSIKE 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|161831357|ref|YP_001597173.1| 50S ribosomal protein L35 [Coxiella burnetii RSA 331]
 gi|189042765|sp|A9N8K3|RL35_COXBR RecName: Full=50S ribosomal protein L35
 gi|161763224|gb|ABX78866.1| ribosomal protein L35 [Coxiella burnetii RSA 331]
          Length = 64

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KTN  + KRF +T +GK++  A+   H + K+S K  R  R    +A +D + V
Sbjct: 1  MPKLKTNRGAVKRFKVTGSGKIKRAASNHNHMLTKKSQKRKRRLRKIHEVAPSDMRAV 58


>gi|167771639|ref|ZP_02443692.1| hypothetical protein ANACOL_03011 [Anaerotruncus colihominis DSM
          17241]
 gi|167666279|gb|EDS10409.1| hypothetical protein ANACOL_03011 [Anaerotruncus colihominis DSM
          17241]
          Length = 65

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT++ +KKRF +T  GKV+   A K H + K+  K  R  R +      +    I+
Sbjct: 1  MPKLKTHTGAKKRFKLTKNGKVKRAHAYKSHILTKKDTKRTRRLRHSTYADKTNVA-TIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LLVPY 64


>gi|319651796|ref|ZP_08005921.1| 50S ribosomal protein L35 [Bacillus sp. 2_A_57_CT2]
 gi|317396448|gb|EFV77161.1| 50S ribosomal protein L35 [Bacillus sp. 2_A_57_CT2]
          Length = 66

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++   A + H    +S K  R  R   +++S D K++ 
Sbjct: 1  MPKMKTHRGAAKRFKRTGSGKLKRSHAYRSHMFANKSQKQKRKLRKGTLVSSGDYKRIR 59


>gi|169824393|ref|YP_001692004.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 29328]
 gi|302380496|ref|ZP_07268961.1| ribosomal protein L35 [Finegoldia magna ACS-171-V-Col3]
 gi|303233884|ref|ZP_07320533.1| ribosomal protein L35 [Finegoldia magna BVS033A4]
 gi|226725012|sp|B0S174|RL35_FINM2 RecName: Full=50S ribosomal protein L35
 gi|167831198|dbj|BAG08114.1| 50S ribosomal protein L35 [Finegoldia magna ATCC 29328]
 gi|302311439|gb|EFK93455.1| ribosomal protein L35 [Finegoldia magna ACS-171-V-Col3]
 gi|302494809|gb|EFL54566.1| ribosomal protein L35 [Finegoldia magna BVS033A4]
          Length = 63

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TGK+R   A   H   K+S K IRN R    ++ AD K++ +
Sbjct: 1  MPKMKTHRGSAKRFRRTGTGKLRRFKAYASHLTGKKSAKRIRNLRKGTTVSEADMKRIDK 60


>gi|284006265|emb|CBA71501.1| 50S ribosomal subunit protein L35 [Arsenophonus nasoniae]
          Length = 65

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKTMVSKGDLGLVV 59


>gi|260438622|ref|ZP_05792438.1| ribosomal protein L35 [Butyrivibrio crossotus DSM 2876]
 gi|292809216|gb|EFF68421.1| ribosomal protein L35 [Butyrivibrio crossotus DSM 2876]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF +T +GK++   A K H + K++ K  RN R   ++ S + K + +
Sbjct: 1  MPKMKTSRAAAKRFKVTGSGKLKRNKAYKSHILTKKTTKRKRNLRKAALVDSTNEKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|188589898|ref|YP_001921629.1| 50S ribosomal protein L35 [Clostridium botulinum E3 str. Alaska
          E43]
 gi|251780306|ref|ZP_04823226.1| 50S ribosomal protein L35 [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
 gi|226724983|sp|B2V5A0|RL35_CLOBA RecName: Full=50S ribosomal protein L35
 gi|188500179|gb|ACD53315.1| 50S ribosomal protein L35 [Clostridium botulinum E3 str. Alaska
          E43]
 gi|243084621|gb|EES50511.1| 50S ribosomal protein L35 [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T TGK++   A K H + K+S K  RN R    ++ ++ +KV++
Sbjct: 1  MPKMKSHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSPKTKRNLRKGGYVSKSE-EKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|253577272|ref|ZP_04854591.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
          D14]
 gi|251843386|gb|EES71415.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
          D14]
          Length = 66

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+SS K RF IT +GKVR   A + H +  +S +  R    + V  + D +++ +
Sbjct: 1  MPKMKTHSSLKGRFKITGSGKVRRYKANRNHLLSHKSKRAKRVLANSPVAYAGDVRRMKQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|262196930|ref|YP_003268139.1| ribosomal protein L35 [Haliangium ochraceum DSM 14365]
 gi|262080277|gb|ACY16246.1| ribosomal protein L35 [Haliangium ochraceum DSM 14365]
          Length = 66

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S +KKRF  TA+GK R    G+RH +  +S K  R  R + ++  A   +V +
Sbjct: 1  MPKMKSKSGAKKRFRATASGKFRRGTKGRRHLLTHKSPKRKRQLRKSALVDKAQHHQV-Q 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|297538936|ref|YP_003674705.1| 50S ribosomal protein L35 [Methylotenera sp. 301]
 gi|297258283|gb|ADI30128.1| ribosomal protein L35 [Methylotenera sp. 301]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF     GKV+   +  RH + K++ K  R  RGT +++  D K+V R
Sbjct: 1  MPKMKTKSGAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRKLRGTAIISPTDVKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|253989348|ref|YP_003040704.1| 50S ribosomal protein L35 [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
 gi|290475545|ref|YP_003468433.1| 50S ribosomal subunit protein A [Xenorhabdus bovienii SS-2004]
 gi|317047870|ref|YP_004115518.1| 50S ribosomal protein L35 [Pantoea sp. At-9b]
 gi|329296185|ref|ZP_08253521.1| 50S ribosomal protein L35 [Plautia stali symbiont]
 gi|253780798|emb|CAQ83960.1| 50s ribosomal protein l35 [Photorhabdus asymbiotica]
 gi|289174866|emb|CBJ81667.1| 50S ribosomal subunit protein A [Xenorhabdus bovienii SS-2004]
 gi|316949487|gb|ADU68962.1| ribosomal protein L35 [Pantoea sp. At-9b]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVV 59


>gi|15639835|ref|NP_219285.1| 50S ribosomal protein L35 [Treponema pallidum subsp. pallidum
          str. Nichols]
 gi|189026073|ref|YP_001933845.1| 50S ribosomal protein L35 [Treponema pallidum subsp. pallidum
          SS14]
 gi|6094064|sp|O83821|RL35_TREPA RecName: Full=50S ribosomal protein L35
 gi|226725080|sp|B2S487|RL35_TREPS RecName: Full=50S ribosomal protein L35
 gi|3323162|gb|AAC65815.1| ribosomal protein L35 (rpmI) [Treponema pallidum subsp. pallidum
          str. Nichols]
 gi|189018648|gb|ACD71266.1| ribosomal protein L35 [Treponema pallidum subsp. pallidum SS14]
 gi|291060207|gb|ADD72942.1| ribosomal protein L35 [Treponema pallidum subsp. pallidum str.
          Chicago]
          Length = 66

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT S++ KRFS+T  GKV+ +    RH + K++ K  R  R    L+  + K V R
Sbjct: 1  MAKMKTKSAAAKRFSVTGAGKVKFKKMNLRHILTKKAPKRKRKLRHAGFLSKVELKVVKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 KLLPY 65


>gi|299136183|ref|ZP_07029367.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX8]
 gi|298602307|gb|EFI58461.1| ribosomal protein L35 [Acidobacterium sp. MP5ACTX8]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S + KRF  T TGK +   +  RH +  ++ K        ++++ AD  KV R
Sbjct: 1  MPKLKTHSGAAKRFKKTGTGKFKRGQSKMRHILTSKATKTKSKLGKIVLVSVADTPKVAR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|291563633|emb|CBL42449.1| LSU ribosomal protein L35P [butyrate-producing bacterium SS3/4]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T TG++    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKMKTSRAAAKRFKKTGTGQLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNSKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|226941671|ref|YP_002796745.1| 50S ribosomal protein L35 [Laribacter hongkongensis HLHK9]
 gi|254802455|sp|C1DDA4|RL35_LARHH RecName: Full=50S ribosomal protein L35
 gi|226716598|gb|ACO75736.1| RpmI [Laribacter hongkongensis HLHK9]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKR  +   G V+   A KRH + K++ K  R  RGT+++   +   V R
Sbjct: 1  MPKMKTKSSAKKRLKVLGNGGVKRSMAFKRHILTKKTTKTKRQLRGTVMVHETNMASV-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|317121666|ref|YP_004101669.1| 50S ribosomal protein L35P [Thermaerobacter marianensis DSM
          12885]
 gi|315591646|gb|ADU50942.1| LSU ribosomal protein L35P [Thermaerobacter marianensis DSM
          12885]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA G+ + Q + + H   K++ K +R  R   VL +AD  + +R
Sbjct: 1  MPKMKTHRGAAKRFRRTARGRFKHQRSNRGHLNEKKNAKRMRRLRQPAVLGAADT-RTVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|217967695|ref|YP_002353201.1| ribosomal protein L35 [Dictyoglomus turgidum DSM 6724]
 gi|226724999|sp|B8E0E2|RL35_DICTD RecName: Full=50S ribosomal protein L35
 gi|217336794|gb|ACK42587.1| ribosomal protein L35 [Dictyoglomus turgidum DSM 6724]
          Length = 66

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+ KRF +TATGK+  + AGKRH + K+S    R       + S D  KV R
Sbjct: 1  MSKLKTRSSAAKRFKVTATGKILHKKAGKRHNLSKKSESRKRRLDIPGEIKSVDRWKVER 60

Query: 61 NYLPNGI 67
            LP  +
Sbjct: 61 -MLPYNL 66


>gi|255526049|ref|ZP_05392972.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|296187096|ref|ZP_06855494.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|255510235|gb|EET86552.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
 gi|296048290|gb|EFG87726.1| ribosomal protein L35 [Clostridium carboxidivorans P7]
          Length = 65

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRF +T TGK++   A K H + K+S K  RN R    ++    +K ++
Sbjct: 1  MPKMKTKRSAAKRFKVTGTGKLKRAKAFKSHILTKKSTKTKRNLRKAGYVSVT-QEKTMK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 QLMPY 64


>gi|328955210|ref|YP_004372543.1| LSU ribosomal protein L35P [Coriobacterium glomerans PW2]
 gi|328455534|gb|AEB06728.1| LSU ribosomal protein L35P [Coriobacterium glomerans PW2]
          Length = 63

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF +T TGK+    A K H   K+S    R  R    ++ AD K +  
Sbjct: 1  MPKMKSHSGTKKRFRLTGTGKIMRAKAFKSHLTGKKSQNRKRGYRQETEVSPADRKVIKA 60

Query: 61 NYL 63
             
Sbjct: 61 RLA 63


>gi|24984029|gb|AAN68079.1|AE016439_14 ribosomal protein L35 [Pseudomonas putida KT2440]
          Length = 69

 Score = 60.8 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG  +L  +D  KV R
Sbjct: 6  MPKMKTKSGAAKRFLKTASG-FKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVER 64

Query: 61 NY 62
            
Sbjct: 65 ML 66


>gi|297565684|ref|YP_003684656.1| 50S ribosomal protein L35 [Meiothermus silvanus DSM 9946]
 gi|296850133|gb|ADH63148.1| ribosomal protein L35 [Meiothermus silvanus DSM 9946]
          Length = 65

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K R  +TA+GKV A+  GKRH    +S   IR+   +   +  +A++V +
Sbjct: 1  MPKMKTHKGAKDRVKVTASGKVIAKRPGKRHLNWHKSGSSIRSKGRSFTFSKGEAERV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 VLLPY 64


>gi|91223967|ref|ZP_01259231.1| 50S ribosomal protein L35 [Vibrio alginolyticus 12G01]
 gi|262394485|ref|YP_003286339.1| 50S ribosomal protein L35p [Vibrio sp. Ex25]
 gi|91191459|gb|EAS77724.1| 50S ribosomal protein L35 [Vibrio alginolyticus 12G01]
 gi|262338079|gb|ACY51874.1| LSU ribosomal protein L35p [Vibrio sp. Ex25]
          Length = 64

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVIR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|255574972|ref|XP_002528392.1| 50S ribosomal protein L35, chloroplast precursor, putative [Ricinus
           communis]
 gi|223532180|gb|EEF33985.1| 50S ribosomal protein L35, chloroplast precursor, putative [Ricinus
           communis]
          Length = 134

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 27/46 (58%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTM 48
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K        +
Sbjct: 82  KMKTHKASAKRFRVTGKGKIMRRRAGKQHLLAKKNTKRKLRLSKMV 127


>gi|169634337|ref|YP_001708073.1| 50S ribosomal protein L35 [Acinetobacter baumannii SDF]
 gi|169797152|ref|YP_001714945.1| 50S ribosomal protein L35 [Acinetobacter baumannii AYE]
 gi|184156920|ref|YP_001845259.1| 50S ribosomal protein L35 [Acinetobacter baumannii ACICU]
 gi|213156058|ref|YP_002318103.1| ribosomal protein L35 [Acinetobacter baumannii AB0057]
 gi|215484615|ref|YP_002326850.1| ribosomal protein L35 [Acinetobacter baumannii AB307-0294]
 gi|239500696|ref|ZP_04660006.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB900]
 gi|255320845|ref|ZP_05362019.1| ribosomal protein L35 [Acinetobacter radioresistens SK82]
 gi|260556055|ref|ZP_05828274.1| ribosomal protein L35 [Acinetobacter baumannii ATCC 19606]
 gi|262380261|ref|ZP_06073416.1| ribosomal protein L35 [Acinetobacter radioresistens SH164]
 gi|301345039|ref|ZP_07225780.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB056]
 gi|301510738|ref|ZP_07235975.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB058]
 gi|301596046|ref|ZP_07241054.1| 50S ribosomal protein L35 [Acinetobacter baumannii AB059]
 gi|332856891|ref|ZP_08436300.1| ribosomal protein L35 [Acinetobacter baumannii 6013150]
 gi|332867206|ref|ZP_08437471.1| ribosomal protein L35 [Acinetobacter baumannii 6013113]
 gi|332874003|ref|ZP_08441938.1| ribosomal protein L35 [Acinetobacter baumannii 6014059]
 gi|226712598|sp|B7H000|RL35_ACIB3 RecName: Full=50S ribosomal protein L35
 gi|226712599|sp|B7I693|RL35_ACIB5 RecName: Full=50S ribosomal protein L35
 gi|226712600|sp|B2HTH5|RL35_ACIBC RecName: Full=50S ribosomal protein L35
 gi|226712601|sp|B0VV92|RL35_ACIBS RecName: Full=50S ribosomal protein L35
 gi|226712602|sp|B0V5N7|RL35_ACIBY RecName: Full=50S ribosomal protein L35
 gi|169150079|emb|CAM87973.1| 50S ribosomal protein L35 [Acinetobacter baumannii AYE]
 gi|169153129|emb|CAP02205.1| 50S ribosomal protein L35 [Acinetobacter baumannii]
 gi|183208514|gb|ACC55912.1| putative ribosomal protein L35 [Acinetobacter baumannii ACICU]
 gi|213055218|gb|ACJ40120.1| ribosomal protein L35 [Acinetobacter baumannii AB0057]
 gi|213987111|gb|ACJ57410.1| ribosomal protein L35 [Acinetobacter baumannii AB307-0294]
 gi|255302014|gb|EET81257.1| ribosomal protein L35 [Acinetobacter radioresistens SK82]
 gi|260410110|gb|EEX03409.1| ribosomal protein L35 [Acinetobacter baumannii ATCC 19606]
 gi|262298455|gb|EEY86369.1| ribosomal protein L35 [Acinetobacter radioresistens SH164]
 gi|322506816|gb|ADX02270.1| rpmI [Acinetobacter baumannii 1656-2]
 gi|323516685|gb|ADX91066.1| 50S ribosomal protein L35 [Acinetobacter baumannii TCDC-AB0715]
 gi|332726945|gb|EGJ58450.1| ribosomal protein L35 [Acinetobacter baumannii 6013150]
 gi|332734145|gb|EGJ65277.1| ribosomal protein L35 [Acinetobacter baumannii 6013113]
 gi|332737744|gb|EGJ68636.1| ribosomal protein L35 [Acinetobacter baumannii 6014059]
          Length = 64

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT   + KRF  TA G  + + A KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MAKLKTRRGAAKRFKATANG-FKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDVASVRR 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 -MCPY 63


>gi|160872051|ref|ZP_02062183.1| ribosomal protein L35 [Rickettsiella grylli]
 gi|159120850|gb|EDP46188.1| ribosomal protein L35 [Rickettsiella grylli]
          Length = 64

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++  + KRF  TA G  +   +   H + K+ +K  R+ R T ++  +D   V R
Sbjct: 1  MPKLKSHRGAAKRFKPTAQG-YKCAQSHHNHILTKKDSKRKRHLRHTHLVDQSDVCAVER 59

Query: 61 NY 62
            
Sbjct: 60 LL 61


>gi|28898055|ref|NP_797660.1| 50S ribosomal protein L35 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839395|ref|ZP_01992062.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ3810]
 gi|260366357|ref|ZP_05778796.1| ribosomal protein L35 [Vibrio parahaemolyticus K5030]
 gi|260878405|ref|ZP_05890760.1| ribosomal protein L35 [Vibrio parahaemolyticus AN-5034]
 gi|260896984|ref|ZP_05905480.1| ribosomal protein L35 [Vibrio parahaemolyticus Peru-466]
 gi|260901783|ref|ZP_05910178.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ4037]
 gi|31340340|sp|Q87Q69|RL35_VIBPA RecName: Full=50S ribosomal protein L35
 gi|28806269|dbj|BAC59544.1| large subunit ribosomal protein L35 [Vibrio parahaemolyticus RIMD
          2210633]
 gi|149747090|gb|EDM58078.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ3810]
 gi|308087663|gb|EFO37358.1| ribosomal protein L35 [Vibrio parahaemolyticus Peru-466]
 gi|308091149|gb|EFO40844.1| ribosomal protein L35 [Vibrio parahaemolyticus AN-5034]
 gi|308108134|gb|EFO45674.1| ribosomal protein L35 [Vibrio parahaemolyticus AQ4037]
 gi|308113115|gb|EFO50655.1| ribosomal protein L35 [Vibrio parahaemolyticus K5030]
 gi|328472987|gb|EGF43835.1| 50S ribosomal protein L35 [Vibrio parahaemolyticus 10329]
          Length = 64

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPRCEVAAVIR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|312898390|ref|ZP_07757780.1| ribosomal protein L35 [Megasphaera micronuciformis F0359]
 gi|310620309|gb|EFQ03879.1| ribosomal protein L35 [Megasphaera micronuciformis F0359]
          Length = 65

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S++ KRFS+T +GK +   A K H + K+S K  RN R   ++A + +  V +
Sbjct: 1  MGKLKTRSAAAKRFSVTGSGKFKRAKAYKSHILEKKSPKRKRNLRKAALVAKSYSDAVRK 60


>gi|212635269|ref|YP_002311794.1| 50S ribosomal protein L35 [Shewanella piezotolerans WP3]
 gi|212556753|gb|ACJ29207.1| Ribosomal protein L35 [Shewanella piezotolerans WP3]
          Length = 72

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R    +A +D   + R
Sbjct: 9  MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 67

Query: 61 NYLPN 65
            LP 
Sbjct: 68 Q-LPY 71


>gi|328953978|ref|YP_004371312.1| 50S ribosomal protein L35 [Desulfobacca acetoxidans DSM 11109]
 gi|328454302|gb|AEB10131.1| 50S ribosomal protein L35 [Desulfobacca acetoxidans DSM 11109]
          Length = 65

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T  G+++   A +RH +  +S+K  R+ R   ++A +  K + +
Sbjct: 1  MPKIKTHRGAAKRFKLTGGGRLKKTKAFRRHILTSKSSKRKRHLRAPEMVAKSSEKNLKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|296122749|ref|YP_003630527.1| ribosomal protein L35 [Planctomyces limnophilus DSM 3776]
 gi|296015089|gb|ADG68328.1| ribosomal protein L35 [Planctomyces limnophilus DSM 3776]
          Length = 66

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K KT+    KRF +TA+GK + ++A + H +  +S    R+ R   V+   +AK +I 
Sbjct: 1  MTKQKTHKGMLKRFKVTASGKAKHRSAYRGHLLSHKSGNRKRHLRLDNVVTGPNAKNIIE 60

Query: 61 NYLP 64
             P
Sbjct: 61 GLRP 64


>gi|323141058|ref|ZP_08075963.1| ribosomal protein L35 [Phascolarctobacterium sp. YIT 12067]
 gi|322414434|gb|EFY05248.1| ribosomal protein L35 [Phascolarctobacterium sp. YIT 12067]
          Length = 65

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF  TA+G+ +     K H +  +S    RN R   ++   D + V +
Sbjct: 1  MPKMKTRRAAAKRFKKTASGEFKHFKNFKSHILEHKSPARKRNLRKAALVHKTDKEHVAK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|258592604|emb|CBE68913.1| 50S ribosomal protein L35 [NC10 bacterium 'Dutch sediment']
          Length = 67

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PK+KT   + KRF +T TGK+R   A K H +  +S K  RN R   +++ AD  ++ R 
Sbjct: 4  PKIKTLKGAAKRFKMTGTGKIRRNKASKSHLLTGKSRKRKRNLRQPGLVSKADTARMER- 62

Query: 62 YLPN 65
           +P 
Sbjct: 63 LIPY 66


>gi|16079938|ref|NP_390764.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|221310828|ref|ZP_03592675.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|221315153|ref|ZP_03596958.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          NCIB 3610]
 gi|221320071|ref|ZP_03601365.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          JH642]
 gi|221324353|ref|ZP_03605647.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          SMY]
 gi|296331562|ref|ZP_06874031.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305675479|ref|YP_003867151.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          str. W23]
 gi|321312420|ref|YP_004204707.1| 50S ribosomal protein L35 [Bacillus subtilis BSn5]
 gi|2500336|sp|P55874|RL35_BACSU RecName: Full=50S ribosomal protein L35
 gi|1770008|emb|CAA99617.1| ribosomal protein L35 [Bacillus subtilis]
 gi|2635351|emb|CAB14846.1| ribosomal protein L35 [Bacillus subtilis subsp. subtilis str.
          168]
 gi|291485320|dbj|BAI86395.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. natto
          BEST195]
 gi|296151157|gb|EFG92037.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305413723|gb|ADM38842.1| 50S ribosomal protein L35 [Bacillus subtilis subsp. spizizenii
          str. W23]
 gi|320018694|gb|ADV93680.1| 50S ribosomal protein L35 [Bacillus subtilis BSn5]
          Length = 66

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSQKQKRKLRKSAVVSAGDFKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|46580940|ref|YP_011748.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120601759|ref|YP_966159.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris DP4]
 gi|54036269|sp|Q728R7|RL35_DESVH RecName: Full=50S ribosomal protein L35
 gi|166231182|sp|A1VBB6|RL35_DESVV RecName: Full=50S ribosomal protein L35
 gi|46450360|gb|AAS97008.1| ribosomal protein L35 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561988|gb|ABM27732.1| LSU ribosomal protein L35P [Desulfovibrio vulgaris DP4]
 gi|311234630|gb|ADP87484.1| ribosomal protein L35 [Desulfovibrio vulgaris RCH1]
          Length = 65

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRFS+T +GK R +    RH + K+S K   N   + ++ + + K V R
Sbjct: 1  MPKIKTRRSAAKRFSVTGSGKFRRRKQNLRHILTKKSAKRKMNLGQSAIVDATNEKAVRR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MMPY 64


>gi|104781108|ref|YP_607606.1| 50S ribosomal protein L35 [Pseudomonas entomophila L48]
 gi|148548431|ref|YP_001268533.1| 50S ribosomal protein L35 [Pseudomonas putida F1]
 gi|161378131|ref|NP_744615.2| 50S ribosomal protein L35 [Pseudomonas putida KT2440]
 gi|167034475|ref|YP_001669706.1| 50S ribosomal protein L35 [Pseudomonas putida GB-1]
 gi|325276810|ref|ZP_08142511.1| 50S ribosomal protein L35 [Pseudomonas sp. TJI-51]
 gi|38372461|sp|Q88K25|RL35_PSEPK RecName: Full=50S ribosomal protein L35
 gi|122403810|sp|Q1IC13|RL35_PSEE4 RecName: Full=50S ribosomal protein L35
 gi|166199823|sp|A5W5D9|RL35_PSEP1 RecName: Full=50S ribosomal protein L35
 gi|189042780|sp|B0KKR6|RL35_PSEPG RecName: Full=50S ribosomal protein L35
 gi|95110095|emb|CAK14800.1| 50S ribosomal subunit protein A [Pseudomonas entomophila L48]
 gi|148512489|gb|ABQ79349.1| LSU ribosomal protein L35P [Pseudomonas putida F1]
 gi|166860963|gb|ABY99370.1| ribosomal protein L35 [Pseudomonas putida GB-1]
 gi|313499444|gb|ADR60810.1| RpmI [Pseudomonas putida BIRD-1]
 gi|324098048|gb|EGB96193.1| 50S ribosomal protein L35 [Pseudomonas sp. TJI-51]
          Length = 64

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG  +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTASG-FKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|288940717|ref|YP_003442957.1| 50S ribosomal protein L35 [Allochromatium vinosum DSM 180]
 gi|288896089|gb|ADC61925.1| ribosomal protein L35 [Allochromatium vinosum DSM 180]
          Length = 65

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +G V+  A+ +RH + K+S K  R  R    +  +D  +  R
Sbjct: 1  MPKIKTNRGAAKRFKRTPSGGVKCNASHRRHILTKKSTKRKRQLRAPQRVHQSDL-RAAR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 RMIPY 64


>gi|50121348|ref|YP_050515.1| 50S ribosomal protein L35 [Pectobacterium atrosepticum SCRI1043]
 gi|261344014|ref|ZP_05971659.1| ribosomal protein L35 [Providencia rustigianii DSM 4541]
 gi|261821453|ref|YP_003259559.1| 50S ribosomal protein L35 [Pectobacterium wasabiae WPP163]
 gi|81693248|sp|Q6D4H0|RL35_ERWCT RecName: Full=50S ribosomal protein L35
 gi|49611874|emb|CAG75323.1| 50S ribosomal subunit protein L35 [Pectobacterium atrosepticum
          SCRI1043]
 gi|261605466|gb|ACX87952.1| ribosomal protein L35 [Pectobacterium wasabiae WPP163]
 gi|282568406|gb|EFB73941.1| ribosomal protein L35 [Providencia rustigianii DSM 4541]
          Length = 65

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVI 59


>gi|226944149|ref|YP_002799222.1| 50S ribosomal protein L35 [Azotobacter vinelandii DJ]
 gi|48474502|sp|Q8RQ00|RL35_AZOVI RecName: Full=50S ribosomal protein L35
 gi|259647343|sp|C1DF44|RL35_AZOVD RecName: Full=50S ribosomal protein L35
 gi|19386910|gb|AAL87032.1|AF332624_3 ribosomal protein L35 [Azotobacter vinelandii]
 gi|226719076|gb|ACO78247.1| 50S ribosomal protein L35 [Azotobacter vinelandii DJ]
          Length = 64

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S +KKRF  TA+G  + + A K H + K + K  R  RGT ++  +D  KV R
Sbjct: 1  MPKMKTKSGAKKRFKPTASG-FKHKHAFKSHILTKMTTKRKRQLRGTSLMHPSDVAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|28411216|emb|CAD24038.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 120

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V
Sbjct: 51  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 106


>gi|311069381|ref|YP_003974304.1| 50S ribosomal protein L35 [Bacillus atrophaeus 1942]
 gi|310869898|gb|ADP33373.1| 50S ribosomal protein L35 [Bacillus atrophaeus 1942]
          Length = 66

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T +GK++   A   H    +S K  R  R + V+++ D K++ +
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKSAVVSAGDFKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|253996953|ref|YP_003049017.1| 50S ribosomal protein L35 [Methylotenera mobilis JLW8]
 gi|253983632|gb|ACT48490.1| ribosomal protein L35 [Methylotenera mobilis JLW8]
          Length = 65

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF     GKV+   +  RH + K++ K  R  RGT +++S D K+V R
Sbjct: 1  MPKMKTKSSAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRKLRGTAIISSTDVKRV-R 59

Query: 61 NYLP 64
            +P
Sbjct: 60 AMMP 63


>gi|302874881|ref|YP_003843514.1| 50S ribosomal protein L35 [Clostridium cellulovorans 743B]
 gi|307690502|ref|ZP_07632948.1| 50S ribosomal protein L35 [Clostridium cellulovorans 743B]
 gi|302577738|gb|ADL51750.1| ribosomal protein L35 [Clostridium cellulovorans 743B]
          Length = 65

 Score = 60.5 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R    ++ A  +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKAGYVSVA-QEKAMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|332288526|ref|YP_004419378.1| 50S ribosomal protein L35 [Gallibacterium anatis UMN179]
 gi|330431422|gb|AEC16481.1| 50S ribosomal protein L35 [Gallibacterium anatis UMN179]
          Length = 65

 Score = 60.5 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T TG  + + +  RH + K+S K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTGTGGFKRKQSHLRHILTKKSTKRKRHLRHKSMVAKADQVLVV 59


>gi|212638372|ref|YP_002314892.1| 50S ribosomal protein L35 [Anoxybacillus flavithermus WK1]
 gi|226713816|sp|B7GGV1|RL35_ANOFW RecName: Full=50S ribosomal protein L35
 gi|212559852|gb|ACJ32907.1| Ribosomal protein L35 [Anoxybacillus flavithermus WK1]
          Length = 66

 Score = 60.5 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  S KRF  T TG+++   A   H    ++ K  R  R   +++  D K++ +
Sbjct: 1  MPKMKTHKGSAKRFKKTGTGQLKRSHAFTSHLFANKTQKQKRKLRKATLVSKGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|148381085|ref|YP_001255626.1| ribosomal protein L35 [Clostridium botulinum A str. ATCC 3502]
 gi|153932520|ref|YP_001385458.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          19397]
 gi|153937318|ref|YP_001388865.1| 50S ribosomal protein L35 [Clostridium botulinum A str. Hall]
 gi|153940615|ref|YP_001392413.1| 50S ribosomal protein L35 [Clostridium botulinum F str.
          Langeland]
 gi|168179215|ref|ZP_02613879.1| ribosomal protein L35 [Clostridium botulinum NCTC 2916]
 gi|170756486|ref|YP_001782770.1| 50S ribosomal protein L35 [Clostridium botulinum B1 str. Okra]
 gi|170759528|ref|YP_001788455.1| 50S ribosomal protein L35 [Clostridium botulinum A3 str. Loch
          Maree]
 gi|187776942|ref|ZP_02993415.1| hypothetical protein CLOSPO_00486 [Clostridium sporogenes ATCC
          15579]
 gi|226950566|ref|YP_002805657.1| ribosomal protein L35 [Clostridium botulinum A2 str. Kyoto]
 gi|237796592|ref|YP_002864144.1| 50S ribosomal protein L35 [Clostridium botulinum Ba4 str. 657]
 gi|166231176|sp|A7FY85|RL35_CLOB1 RecName: Full=50S ribosomal protein L35
 gi|166231177|sp|A5I6L6|RL35_CLOBH RecName: Full=50S ribosomal protein L35
 gi|166231178|sp|A7GI03|RL35_CLOBL RecName: Full=50S ribosomal protein L35
 gi|226724985|sp|B1IMV1|RL35_CLOBK RecName: Full=50S ribosomal protein L35
 gi|226724986|sp|B1L0T5|RL35_CLOBM RecName: Full=50S ribosomal protein L35
 gi|254802442|sp|C1FKM8|RL35_CLOBJ RecName: Full=50S ribosomal protein L35
 gi|259647346|sp|C3KTJ8|RL35_CLOB6 RecName: Full=50S ribosomal protein L35
 gi|148290569|emb|CAL84698.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          3502]
 gi|152928564|gb|ABS34064.1| 50S ribosomal protein L35 [Clostridium botulinum A str. ATCC
          19397]
 gi|152933232|gb|ABS38731.1| 50S ribosomal protein L35 [Clostridium botulinum A str. Hall]
 gi|152936511|gb|ABS42009.1| 50S ribosomal protein L35 [Clostridium botulinum F str.
          Langeland]
 gi|169121698|gb|ACA45534.1| 50S ribosomal protein L35 [Clostridium botulinum B1 str. Okra]
 gi|169406517|gb|ACA54928.1| 50S ribosomal protein L35 [Clostridium botulinum A3 str. Loch
          Maree]
 gi|182670133|gb|EDT82109.1| ribosomal protein L35 [Clostridium botulinum NCTC 2916]
 gi|187775601|gb|EDU39403.1| hypothetical protein CLOSPO_00486 [Clostridium sporogenes ATCC
          15579]
 gi|226844483|gb|ACO87149.1| ribosomal protein L35 [Clostridium botulinum A2 str. Kyoto]
 gi|229261963|gb|ACQ52996.1| 50S ribosomal protein L35 [Clostridium botulinum Ba4 str. 657]
 gi|295320403|gb|ADG00781.1| 50S ribosomal protein L35 [Clostridium botulinum F str. 230613]
 gi|322807446|emb|CBZ05020.1| LSU ribosomal protein L35p [Clostridium botulinum H04402 065]
          Length = 65

 Score = 60.5 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK++   A K H + K+S K  RN R    ++ +  +KV++
Sbjct: 1  MPKMKTKRAAAKRFKVTGTGKLKRAKAFKSHILTKKSRKTKRNLRKAGYVSES-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KVLPY 64


>gi|30022649|ref|NP_834280.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 14579]
 gi|30264644|ref|NP_847021.1| 50S ribosomal protein L35 [Bacillus anthracis str. Ames]
 gi|42783751|ref|NP_980998.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10987]
 gi|47530115|ref|YP_021464.1| 50S ribosomal protein L35 [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49187465|ref|YP_030717.1| 50S ribosomal protein L35 [Bacillus anthracis str. Sterne]
 gi|49481333|ref|YP_038620.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|52140933|ref|YP_085895.1| 50S ribosomal protein L35 [Bacillus cereus E33L]
 gi|65321942|ref|ZP_00394901.1| COG0291: Ribosomal protein L35 [Bacillus anthracis str. A2012]
 gi|118479722|ref|YP_896873.1| 50S ribosomal protein L35 [Bacillus thuringiensis str. Al Hakam]
 gi|163942308|ref|YP_001647192.1| 50S ribosomal protein L35 [Bacillus weihenstephanensis KBAB4]
 gi|165871489|ref|ZP_02216136.1| ribosomal protein L35 [Bacillus anthracis str. A0488]
 gi|167641593|ref|ZP_02399840.1| ribosomal protein L35 [Bacillus anthracis str. A0193]
 gi|170708697|ref|ZP_02899135.1| ribosomal protein L35 [Bacillus anthracis str. A0389]
 gi|177653113|ref|ZP_02935400.1| ribosomal protein L35 [Bacillus anthracis str. A0174]
 gi|190569442|ref|ZP_03022322.1| ribosomal protein L35 [Bacillus anthracis Tsiankovskii-I]
 gi|196034330|ref|ZP_03101739.1| ribosomal protein L35 [Bacillus cereus W]
 gi|196047723|ref|ZP_03114925.1| ribosomal protein L35 [Bacillus cereus 03BB108]
 gi|206969688|ref|ZP_03230642.1| 50S ribosomal protein L35 [Bacillus cereus AH1134]
 gi|217962053|ref|YP_002340623.1| 50S ribosomal protein L35 [Bacillus cereus AH187]
 gi|218231773|ref|YP_002369369.1| 50S ribosomal protein L35 [Bacillus cereus B4264]
 gi|218899727|ref|YP_002448138.1| ribosomal protein L35 [Bacillus cereus G9842]
 gi|218905801|ref|YP_002453635.1| ribosomal protein L35 [Bacillus cereus AH820]
 gi|222098036|ref|YP_002532093.1| 50S ribosomal protein l35 [Bacillus cereus Q1]
 gi|225866551|ref|YP_002751929.1| 50S ribosomal protein L35 [Bacillus cereus 03BB102]
 gi|227817358|ref|YP_002817367.1| 50S ribosomal protein L35 [Bacillus anthracis str. CDC 684]
 gi|228903091|ref|ZP_04067227.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 4222]
 gi|228910397|ref|ZP_04074212.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 200]
 gi|228917213|ref|ZP_04080770.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228923317|ref|ZP_04086605.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228929621|ref|ZP_04092639.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228935881|ref|ZP_04098691.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228941752|ref|ZP_04104299.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228948299|ref|ZP_04110582.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228954842|ref|ZP_04116862.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228960842|ref|ZP_04122477.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228967670|ref|ZP_04128691.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228974676|ref|ZP_04135242.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228981270|ref|ZP_04141570.1| 50S ribosomal protein L35 [Bacillus thuringiensis Bt407]
 gi|228987821|ref|ZP_04147930.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228993301|ref|ZP_04153217.1| 50S ribosomal protein L35 [Bacillus pseudomycoides DSM 12442]
 gi|228999354|ref|ZP_04158933.1| 50S ribosomal protein L35 [Bacillus mycoides Rock3-17]
 gi|229006909|ref|ZP_04164539.1| 50S ribosomal protein L35 [Bacillus mycoides Rock1-4]
 gi|229013777|ref|ZP_04170905.1| 50S ribosomal protein L35 [Bacillus mycoides DSM 2048]
 gi|229019798|ref|ZP_04176601.1| 50S ribosomal protein L35 [Bacillus cereus AH1273]
 gi|229027591|ref|ZP_04183809.1| 50S ribosomal protein L35 [Bacillus cereus AH1272]
 gi|229048281|ref|ZP_04193849.1| 50S ribosomal protein L35 [Bacillus cereus AH676]
 gi|229062258|ref|ZP_04199579.1| 50S ribosomal protein L35 [Bacillus cereus AH603]
 gi|229072075|ref|ZP_04205284.1| 50S ribosomal protein L35 [Bacillus cereus F65185]
 gi|229076076|ref|ZP_04209044.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-18]
 gi|229081826|ref|ZP_04214318.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-2]
 gi|229087130|ref|ZP_04219280.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-44]
 gi|229093671|ref|ZP_04224771.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-42]
 gi|229099035|ref|ZP_04229969.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-29]
 gi|229105201|ref|ZP_04235850.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-28]
 gi|229112038|ref|ZP_04241581.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-15]
 gi|229118065|ref|ZP_04247424.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-3]
 gi|229124140|ref|ZP_04253332.1| 50S ribosomal protein L35 [Bacillus cereus 95/8201]
 gi|229129857|ref|ZP_04258823.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-Cer4]
 gi|229135409|ref|ZP_04264197.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST196]
 gi|229141299|ref|ZP_04269837.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST26]
 gi|229147132|ref|ZP_04275491.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST24]
 gi|229152768|ref|ZP_04280951.1| 50S ribosomal protein L35 [Bacillus cereus m1550]
 gi|229158177|ref|ZP_04286244.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 4342]
 gi|229163565|ref|ZP_04291515.1| 50S ribosomal protein L35 [Bacillus cereus R309803]
 gi|229169301|ref|ZP_04297011.1| 50S ribosomal protein L35 [Bacillus cereus AH621]
 gi|229180892|ref|ZP_04308227.1| 50S ribosomal protein L35 [Bacillus cereus 172560W]
 gi|229186830|ref|ZP_04313985.1| 50S ribosomal protein L35 [Bacillus cereus BGSC 6E1]
 gi|229192774|ref|ZP_04319732.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10876]
 gi|229198722|ref|ZP_04325420.1| 50S ribosomal protein L35 [Bacillus cereus m1293]
 gi|229602081|ref|YP_002868853.1| 50S ribosomal protein L35 [Bacillus anthracis str. A0248]
 gi|254686933|ref|ZP_05150791.1| 50S ribosomal protein L35 [Bacillus anthracis str. CNEVA-9066]
 gi|254724497|ref|ZP_05186280.1| 50S ribosomal protein L35 [Bacillus anthracis str. A1055]
 gi|254736682|ref|ZP_05194388.1| 50S ribosomal protein L35 [Bacillus anthracis str. Western North
          America USA6153]
 gi|254741720|ref|ZP_05199407.1| 50S ribosomal protein L35 [Bacillus anthracis str. Kruger B]
 gi|254754683|ref|ZP_05206718.1| 50S ribosomal protein L35 [Bacillus anthracis str. Vollum]
 gi|254757515|ref|ZP_05209542.1| 50S ribosomal protein L35 [Bacillus anthracis str. Australia 94]
 gi|301056080|ref|YP_003794291.1| 50S ribosomal protein L35 [Bacillus anthracis CI]
 gi|54036261|sp|Q6HCV6|RL35_BACHK RecName: Full=50S ribosomal protein L35
 gi|54036272|sp|Q72ZG3|RL35_BACC1 RecName: Full=50S ribosomal protein L35
 gi|54036298|sp|Q817H6|RL35_BACCR RecName: Full=50S ribosomal protein L35
 gi|54036299|sp|Q81L16|RL35_BACAN RecName: Full=50S ribosomal protein L35
 gi|81685963|sp|Q633M2|RL35_BACCZ RecName: Full=50S ribosomal protein L35
 gi|166231156|sp|A0RJH3|RL35_BACAH RecName: Full=50S ribosomal protein L35
 gi|226713817|sp|B7JR81|RL35_BACC0 RecName: Full=50S ribosomal protein L35
 gi|226713818|sp|B7IJX2|RL35_BACC2 RecName: Full=50S ribosomal protein L35
 gi|226713819|sp|B7HF87|RL35_BACC4 RecName: Full=50S ribosomal protein L35
 gi|226713820|sp|B7HRL3|RL35_BACC7 RecName: Full=50S ribosomal protein L35
 gi|226713821|sp|A9VJN7|RL35_BACWK RecName: Full=50S ribosomal protein L35
 gi|254802429|sp|C3PAG3|RL35_BACAA RecName: Full=50S ribosomal protein L35
 gi|254802430|sp|C3L8V2|RL35_BACAC RecName: Full=50S ribosomal protein L35
 gi|254802431|sp|C1EUR8|RL35_BACC3 RecName: Full=50S ribosomal protein L35
 gi|254802432|sp|B9J074|RL35_BACCQ RecName: Full=50S ribosomal protein L35
 gi|29898207|gb|AAP11481.1| LSU ribosomal protein L35P [Bacillus cereus ATCC 14579]
 gi|30259319|gb|AAP28507.1| 50S ribosomal protein L35 [Bacillus anthracis str. Ames]
 gi|42739681|gb|AAS43606.1| ribosomal protein L35 [Bacillus cereus ATCC 10987]
 gi|47505263|gb|AAT33939.1| ribosomal protein L35 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181392|gb|AAT56768.1| ribosomal protein L35 [Bacillus anthracis str. Sterne]
 gi|49332889|gb|AAT63535.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          thuringiensis serovar konkukian str. 97-27]
 gi|51974402|gb|AAU15952.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          cereus E33L]
 gi|118418947|gb|ABK87366.1| LSU ribosomal protein L35P [Bacillus thuringiensis str. Al Hakam]
 gi|163864505|gb|ABY45564.1| ribosomal protein L35 [Bacillus weihenstephanensis KBAB4]
 gi|164712786|gb|EDR18316.1| ribosomal protein L35 [Bacillus anthracis str. A0488]
 gi|167510478|gb|EDR85877.1| ribosomal protein L35 [Bacillus anthracis str. A0193]
 gi|170126377|gb|EDS95266.1| ribosomal protein L35 [Bacillus anthracis str. A0389]
 gi|172081637|gb|EDT66708.1| ribosomal protein L35 [Bacillus anthracis str. A0174]
 gi|190559447|gb|EDV13452.1| ribosomal protein L35 [Bacillus anthracis Tsiankovskii-I]
 gi|195992872|gb|EDX56831.1| ribosomal protein L35 [Bacillus cereus W]
 gi|196021444|gb|EDX60149.1| ribosomal protein L35 [Bacillus cereus 03BB108]
 gi|206735376|gb|EDZ52544.1| 50S ribosomal protein L35 [Bacillus cereus AH1134]
 gi|217066715|gb|ACJ80965.1| ribosomal protein L35 [Bacillus cereus AH187]
 gi|218159730|gb|ACK59722.1| ribosomal protein L35 [Bacillus cereus B4264]
 gi|218536709|gb|ACK89107.1| ribosomal protein L35 [Bacillus cereus AH820]
 gi|218541201|gb|ACK93595.1| ribosomal protein L35 [Bacillus cereus G9842]
 gi|221242094|gb|ACM14804.1| ribosomal protein L35 (50S ribosomal protein L35) [Bacillus
          cereus Q1]
 gi|225789009|gb|ACO29226.1| 50S ribosomal protein L35 [Bacillus cereus 03BB102]
 gi|227005507|gb|ACP15250.1| 50S ribosomal protein L35 [Bacillus anthracis str. CDC 684]
 gi|228584744|gb|EEK42864.1| 50S ribosomal protein L35 [Bacillus cereus m1293]
 gi|228590613|gb|EEK48474.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 10876]
 gi|228596567|gb|EEK54232.1| 50S ribosomal protein L35 [Bacillus cereus BGSC 6E1]
 gi|228602449|gb|EEK59935.1| 50S ribosomal protein L35 [Bacillus cereus 172560W]
 gi|228614064|gb|EEK71179.1| 50S ribosomal protein L35 [Bacillus cereus AH621]
 gi|228619947|gb|EEK76823.1| 50S ribosomal protein L35 [Bacillus cereus R309803]
 gi|228625135|gb|EEK81895.1| 50S ribosomal protein L35 [Bacillus cereus ATCC 4342]
 gi|228630588|gb|EEK87234.1| 50S ribosomal protein L35 [Bacillus cereus m1550]
 gi|228636381|gb|EEK92852.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST24]
 gi|228642080|gb|EEK98373.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST26]
 gi|228648052|gb|EEL04099.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-ST196]
 gi|228653548|gb|EEL09420.1| 50S ribosomal protein L35 [Bacillus cereus BDRD-Cer4]
 gi|228659442|gb|EEL15090.1| 50S ribosomal protein L35 [Bacillus cereus 95/8201]
 gi|228665288|gb|EEL20771.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-3]
 gi|228671361|gb|EEL26662.1| 50S ribosomal protein L35 [Bacillus cereus Rock1-15]
 gi|228678127|gb|EEL32355.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-28]
 gi|228684263|gb|EEL38207.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-29]
 gi|228689758|gb|EEL43565.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-42]
 gi|228696198|gb|EEL49033.1| 50S ribosomal protein L35 [Bacillus cereus Rock3-44]
 gi|228701414|gb|EEL53908.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-2]
 gi|228706939|gb|EEL59144.1| 50S ribosomal protein L35 [Bacillus cereus Rock4-18]
 gi|228711009|gb|EEL62975.1| 50S ribosomal protein L35 [Bacillus cereus F65185]
 gi|228716986|gb|EEL68667.1| 50S ribosomal protein L35 [Bacillus cereus AH603]
 gi|228723006|gb|EEL74383.1| 50S ribosomal protein L35 [Bacillus cereus AH676]
 gi|228733710|gb|EEL84486.1| 50S ribosomal protein L35 [Bacillus cereus AH1272]
 gi|228741523|gb|EEL91720.1| 50S ribosomal protein L35 [Bacillus cereus AH1273]
 gi|228747446|gb|EEL97321.1| 50S ribosomal protein L35 [Bacillus mycoides DSM 2048]
 gi|228754309|gb|EEM03724.1| 50S ribosomal protein L35 [Bacillus mycoides Rock1-4]
 gi|228760299|gb|EEM09266.1| 50S ribosomal protein L35 [Bacillus mycoides Rock3-17]
 gi|228766369|gb|EEM15012.1| 50S ribosomal protein L35 [Bacillus pseudomycoides DSM 12442]
 gi|228771869|gb|EEM20326.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228778470|gb|EEM26737.1| 50S ribosomal protein L35 [Bacillus thuringiensis Bt407]
 gi|228785079|gb|EEM33092.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228792046|gb|EEM39627.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228798864|gb|EEM45843.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228804831|gb|EEM51430.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228811286|gb|EEM57624.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228817964|gb|EEM64042.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228823649|gb|EEM69471.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228830008|gb|EEM75627.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228836271|gb|EEM81624.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228842414|gb|EEM87505.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228849163|gb|EEM94002.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 200]
 gi|228856500|gb|EEN01024.1| 50S ribosomal protein L35 [Bacillus thuringiensis IBL 4222]
 gi|229266489|gb|ACQ48126.1| 50S ribosomal protein L35 [Bacillus anthracis str. A0248]
 gi|300378249|gb|ADK07153.1| 50S ribosomal protein L35 [Bacillus cereus biovar anthracis str.
          CI]
 gi|324328467|gb|ADY23727.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          finitimus YBT-020]
 gi|326942357|gb|AEA18253.1| 50S ribosomal protein L35 [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 66

 Score = 60.5 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF  T +GK++   A   H    +S K  R  R   V+++ D K++ +
Sbjct: 1  MPKQKTHRGAAKRFKKTGSGKLKRSHAYTSHLFANKSTKAKRKLRKAGVVSAGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|170721153|ref|YP_001748841.1| 50S ribosomal protein L35 [Pseudomonas putida W619]
 gi|226725052|sp|B1J6U6|RL35_PSEPW RecName: Full=50S ribosomal protein L35
 gi|169759156|gb|ACA72472.1| ribosomal protein L35 [Pseudomonas putida W619]
          Length = 64

 Score = 60.1 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + A K H + K S K  R  RG+ +L  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTATG-FKHKHAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVAR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|296119683|ref|ZP_06838241.1| ribosomal protein L35 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967566|gb|EFG80833.1| ribosomal protein L35 [Corynebacterium ammoniagenes DSM 20306]
          Length = 64

 Score = 60.1 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + AG+RH +  +++K  R  +GT  +A AD K++ R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGRRHLLEGKTSKRTRRLKGTEAVAPADVKRIKRLL 61


>gi|260892437|ref|YP_003238534.1| ribosomal protein L35 [Ammonifex degensii KC4]
 gi|260864578|gb|ACX51684.1| ribosomal protein L35 [Ammonifex degensii KC4]
          Length = 66

 Score = 60.1 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQ-AAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT+  + KRF  T  GK+ A   +GK H + K++++  R  R   VL   DA ++ 
Sbjct: 1  MPKVKTHRGAAKRFKKTGKGKIVAYCRSGKSHLLEKKTSQRKRRLRHKKVLQPGDAAQIR 60

Query: 60 RNYLPN 65
          R  +P 
Sbjct: 61 R-LIPY 65


>gi|266625014|ref|ZP_06117949.1| ribosomal protein L35 [Clostridium hathewayi DSM 13479]
 gi|315651591|ref|ZP_07904608.1| 50S ribosomal protein L35 [Eubacterium saburreum DSM 3986]
 gi|331001968|ref|ZP_08325488.1| 50S ribosomal protein L35 [Lachnospiraceae oral taxon 107 str.
          F0167]
 gi|288863094|gb|EFC95392.1| ribosomal protein L35 [Clostridium hathewayi DSM 13479]
 gi|315486150|gb|EFU76515.1| 50S ribosomal protein L35 [Eubacterium saburreum DSM 3986]
 gi|330411764|gb|EGG91169.1| 50S ribosomal protein L35 [Lachnospiraceae oral taxon 107 str.
          F0167]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNAKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|303248734|ref|ZP_07334987.1| ribosomal protein L35 [Desulfovibrio fructosovorans JJ]
 gi|302489899|gb|EFL49827.1| ribosomal protein L35 [Desulfovibrio fructosovorans JJ]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF+ T +GK   +    RH + K++ K  R      ++  A+ K V R
Sbjct: 1  MPKMKTNRSAAKRFTKTGSGKFARRRQNLRHILTKKNAKRTRRLGQGTLVDKANEKAVRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|183598818|ref|ZP_02960311.1| hypothetical protein PROSTU_02250 [Providencia stuartii ATCC
          25827]
 gi|212711440|ref|ZP_03319568.1| hypothetical protein PROVALCAL_02513 [Providencia alcalifaciens
          DSM 30120]
 gi|253688277|ref|YP_003017467.1| ribosomal protein L35 [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|268592569|ref|ZP_06126790.1| ribosomal protein L35 [Providencia rettgeri DSM 1131]
 gi|259647360|sp|C6DFY8|RL35_PECCP RecName: Full=50S ribosomal protein L35
 gi|188021026|gb|EDU59066.1| hypothetical protein PROSTU_02250 [Providencia stuartii ATCC
          25827]
 gi|212685896|gb|EEB45424.1| hypothetical protein PROVALCAL_02513 [Providencia alcalifaciens
          DSM 30120]
 gi|251754855|gb|ACT12931.1| ribosomal protein L35 [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|291311983|gb|EFE52436.1| ribosomal protein L35 [Providencia rettgeri DSM 1131]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVV 59


>gi|224510777|pdb|3FIN|8 Chain 8, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
          And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
          6.4 A Cryo-Em Map. This File Contains The 50s Subunit.
 gi|300508659|pdb|3MRZ|5 Chain 5, Recognition Of The Amber Stop Codon By Release Factor
          Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          3ms0. Molecule A In The Same Asymmetric Unit Is
          Deposited As 3mr8 (50s) And 3ms1 (30s).
 gi|300508714|pdb|3MS1|5 Chain 5, Recognition Of The Amber Stop Codon By Release Factor
          Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit.
          The 30s Ribosomal Subunit Can Be Found In Pdb Entry
          3mr8. Molecule B In The Same Asymmetric Unit Is
          Deposited As 3mrz (50s) And 3ms0 (30s).
 gi|12056102|emb|CAC21225.1| ribosomal protein L35 [Thermus thermophilus]
          Length = 64

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A+++ + 
Sbjct: 1  PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERI-KL 59

Query: 62 YLPN 65
           LP 
Sbjct: 60 LLPY 63


>gi|152976957|ref|YP_001376474.1| 50S ribosomal protein L35 [Bacillus cereus subsp. cytotoxis NVH
          391-98]
 gi|189042755|sp|A7GTM1|RL35_BACCN RecName: Full=50S ribosomal protein L35
 gi|152025709|gb|ABS23479.1| ribosomal protein L35 [Bacillus cytotoxicus NVH 391-98]
          Length = 66

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  + KRF  T +GK++   A   H    +S K  R  R   ++++ D K++ +
Sbjct: 1  MPKQKTHRGAAKRFKKTGSGKLKRDHAYTSHLFANKSTKAKRKLRKAGLVSAGDYKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|283851377|ref|ZP_06368659.1| ribosomal protein L35 [Desulfovibrio sp. FW1012B]
 gi|283573327|gb|EFC21305.1| ribosomal protein L35 [Desulfovibrio sp. FW1012B]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF  T +GK   +    RH + K++ K  R      ++ SA+ K V R
Sbjct: 1  MPKMKTNRSAAKRFGKTGSGKFTRRRQNLRHILTKKNAKRSRRLGQGALVDSANVKAVRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|226311195|ref|YP_002771089.1| 50S ribosomal protein L35 [Brevibacillus brevis NBRC 100599]
 gi|254802436|sp|C0Z9B5|RL35_BREBN RecName: Full=50S ribosomal protein L35
 gi|226094143|dbj|BAH42585.1| 50S ribosomal protein L35 [Brevibacillus brevis NBRC 100599]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN ++ KRF  T +G+++   A   H    +S K  R+ R   +++  D K++
Sbjct: 1  MPKMKTNKAAAKRFKKTGSGQLKRDRAFGSHLFANKSTKAKRHLRKAALVSKGDQKRI 58


>gi|159486445|ref|XP_001701250.1| plastid ribosomal protein L35 [Chlamydomonas reinhardtii]
 gi|158271832|gb|EDO97643.1| plastid ribosomal protein L35 [Chlamydomonas reinhardtii]
          Length = 114

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT  S+ KRF +T +GKV A+ AGK+H   K +   IR++    VL+ A+     +  
Sbjct: 47  KLKTRKSAAKRFKVTGSGKVTARHAGKQHFNEKMTRDHIRDSSKMFVLSPANIYNATKC- 105

Query: 63  LPN 65
           LPN
Sbjct: 106 LPN 108


>gi|45442009|ref|NP_993548.1| 50S ribosomal protein L35 [Yersinia pestis biovar Microtus str.
          91001]
 gi|51596664|ref|YP_070855.1| 50S ribosomal protein L35 [Yersinia pseudotuberculosis IP 32953]
 gi|108807771|ref|YP_651687.1| 50S ribosomal protein L35 [Yersinia pestis Antiqua]
 gi|108812048|ref|YP_647815.1| 50S ribosomal protein L35 [Yersinia pestis Nepal516]
 gi|145598022|ref|YP_001162098.1| 50S ribosomal protein L35 [Yersinia pestis Pestoides F]
 gi|149365660|ref|ZP_01887695.1| 50S ribosomal protein L35 [Yersinia pestis CA88-4125]
 gi|153950310|ref|YP_001400691.1| 50S ribosomal protein L35 [Yersinia pseudotuberculosis IP 31758]
 gi|162419295|ref|YP_001607030.1| 50S ribosomal protein L35 [Yersinia pestis Angola]
 gi|165927460|ref|ZP_02223292.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          F1991016]
 gi|165939517|ref|ZP_02228063.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          IP275]
 gi|166011799|ref|ZP_02232697.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          E1979001]
 gi|166211141|ref|ZP_02237176.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          B42003004]
 gi|167400858|ref|ZP_02306364.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          UG05-0454]
 gi|167422059|ref|ZP_02313812.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          MG05-1020]
 gi|167425016|ref|ZP_02316769.1| ribosomal protein L35 [Yersinia pestis biovar Mediaevalis str.
          K1973002]
 gi|170024061|ref|YP_001720566.1| 50S ribosomal protein L35 [Yersinia pseudotuberculosis YPIII]
 gi|186895720|ref|YP_001872832.1| 50S ribosomal protein L35 [Yersinia pseudotuberculosis PB1/+]
 gi|218929520|ref|YP_002347395.1| 50S ribosomal protein L35 [Yersinia pestis CO92]
 gi|229837958|ref|ZP_04458117.1| 50S ribosomal subunit protein L35 [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229895119|ref|ZP_04510295.1| 50S ribosomal subunit protein L35 [Yersinia pestis Pestoides A]
 gi|229898519|ref|ZP_04513664.1| 50S ribosomal subunit protein L35 [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229902360|ref|ZP_04517480.1| 50S ribosomal subunit protein L35 [Yersinia pestis Nepal516]
 gi|270490460|ref|ZP_06207534.1| ribosomal protein L35 [Yersinia pestis KIM D27]
 gi|20139505|sp|Q8ZDW7|RL35_YERPE RecName: Full=50S ribosomal protein L35
 gi|81691747|sp|Q669Z2|RL35_YERPS RecName: Full=50S ribosomal protein L35
 gi|118573026|sp|Q1C730|RL35_YERPA RecName: Full=50S ribosomal protein L35
 gi|118573027|sp|Q1CIG5|RL35_YERPN RecName: Full=50S ribosomal protein L35
 gi|166233053|sp|A4TIL3|RL35_YERPP RecName: Full=50S ribosomal protein L35
 gi|166988038|sp|A7FHG3|RL35_YERP3 RecName: Full=50S ribosomal protein L35
 gi|226725088|sp|B2K666|RL35_YERPB RecName: Full=50S ribosomal protein L35
 gi|226725089|sp|A9R0A6|RL35_YERPG RecName: Full=50S ribosomal protein L35
 gi|226725090|sp|B1JJ19|RL35_YERPY RecName: Full=50S ribosomal protein L35
 gi|45436872|gb|AAS62425.1| 50S ribosomal protein L35 [Yersinia pestis biovar Microtus str.
          91001]
 gi|51589946|emb|CAH21578.1| 50S ribosomal protein L35 [Yersinia pseudotuberculosis IP 32953]
 gi|108775696|gb|ABG18215.1| LSU ribosomal protein L35P [Yersinia pestis Nepal516]
 gi|108779684|gb|ABG13742.1| LSU ribosomal protein L35P [Yersinia pestis Antiqua]
 gi|115348131|emb|CAL21059.1| 50S ribosomal protein L35 [Yersinia pestis CO92]
 gi|145209718|gb|ABP39125.1| LSU ribosomal protein L35P [Yersinia pestis Pestoides F]
 gi|149292073|gb|EDM42147.1| 50S ribosomal protein L35 [Yersinia pestis CA88-4125]
 gi|152961805|gb|ABS49266.1| ribosomal protein L35 [Yersinia pseudotuberculosis IP 31758]
 gi|162352110|gb|ABX86058.1| ribosomal protein L35 [Yersinia pestis Angola]
 gi|165912566|gb|EDR31197.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          IP275]
 gi|165920515|gb|EDR37792.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          F1991016]
 gi|165989264|gb|EDR41565.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          E1979001]
 gi|166208321|gb|EDR52801.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          B42003004]
 gi|166958871|gb|EDR55892.1| ribosomal protein L35 [Yersinia pestis biovar Orientalis str.
          MG05-1020]
 gi|167049711|gb|EDR61119.1| ribosomal protein L35 [Yersinia pestis biovar Antiqua str.
          UG05-0454]
 gi|167056203|gb|EDR65981.1| ribosomal protein L35 [Yersinia pestis biovar Mediaevalis str.
          K1973002]
 gi|169750595|gb|ACA68113.1| ribosomal protein L35 [Yersinia pseudotuberculosis YPIII]
 gi|186698746|gb|ACC89375.1| ribosomal protein L35 [Yersinia pseudotuberculosis PB1/+]
 gi|229680695|gb|EEO76791.1| 50S ribosomal subunit protein L35 [Yersinia pestis Nepal516]
 gi|229688067|gb|EEO80138.1| 50S ribosomal subunit protein L35 [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229694324|gb|EEO84371.1| 50S ribosomal subunit protein L35 [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229701881|gb|EEO89904.1| 50S ribosomal subunit protein L35 [Yersinia pestis Pestoides A]
 gi|270338964|gb|EFA49741.1| ribosomal protein L35 [Yersinia pestis KIM D27]
 gi|320015088|gb|ADV98659.1| 50S ribosomal subunit protein L35 [Yersinia pestis biovar
          Medievalis str. Harbin 35]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRF  TA G  + + A  RH + K++ K  R+ R   +++  D   V+ 
Sbjct: 1  MPKIKTVRGAAKRFKKTANGGFKRKHANLRHILTKKATKRKRHLRPKGLVSKNDLGLVVA 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|256372442|ref|YP_003110266.1| ribosomal protein L35 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009026|gb|ACU54593.1| ribosomal protein L35 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT++ +K RF  T TGK+  + A   H + K+S+  +R      VL+  D ++ +R
Sbjct: 1  MPKMKTDTGAKARFKRTGTGKLMRRHAFTSHLLGKKSSSRLRRLHREGVLSRGDTRRALR 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|258515611|ref|YP_003191833.1| 50S ribosomal protein L35 [Desulfotomaculum acetoxidans DSM 771]
 gi|257779316|gb|ACV63210.1| ribosomal protein L35 [Desulfotomaculum acetoxidans DSM 771]
          Length = 63

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++  + KRF  TA GK++   A K H + K+S K  R  R   VL+  D K+++R
Sbjct: 1  MPKIKSHRGAAKRFKKTANGKIKGNHAFKSHILGKKSAKRKRKLRKEYVLSKPDTKRIMR 60


>gi|160945994|ref|ZP_02093220.1| hypothetical protein FAEPRAM212_03527 [Faecalibacterium
          prausnitzii M21/2]
 gi|313115005|ref|ZP_07800498.1| ribosomal protein L35 [Faecalibacterium cf. prausnitzii KLE1255]
 gi|158443725|gb|EDP20730.1| hypothetical protein FAEPRAM212_03527 [Faecalibacterium
          prausnitzii M21/2]
 gi|295100356|emb|CBK97901.1| LSU ribosomal protein L35P [Faecalibacterium prausnitzii L2-6]
 gi|295103246|emb|CBL00790.1| LSU ribosomal protein L35P [Faecalibacterium prausnitzii SL3/3]
 gi|310622696|gb|EFQ06158.1| ribosomal protein L35 [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 67

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T  GK++   A + H + K++ K  R  R    +   +A   I++ 
Sbjct: 5  KLKTHSGAKKRFKLTKNGKIKRGHAFRSHILTKKTTKLTRGYRQPSYVDKTNAA-TIKSM 63

Query: 63 LPN 65
          LP 
Sbjct: 64 LPY 66


>gi|86143059|ref|ZP_01061481.1| ribosomal protein L35 [Leeuwenhoekiella blandensis MED217]
 gi|85830504|gb|EAQ48963.1| ribosomal protein L35 [Leeuwenhoekiella blandensis MED217]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  S+KKRF +T TGK++ + A K H + K+S K         ++  AD   V 
Sbjct: 1  MPKMKTKGSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHDTLVHKADENNVK 59


>gi|187932485|ref|YP_001886667.1| 50S ribosomal protein L35 [Clostridium botulinum B str. Eklund
          17B]
 gi|226724984|sp|B2TS60|RL35_CLOBB RecName: Full=50S ribosomal protein L35
 gi|187720638|gb|ACD21859.1| 50S ribosomal protein L35 [Clostridium botulinum B str. Eklund
          17B]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T TGK++   A K H + K+S K  RN R    ++ +  +KV++
Sbjct: 1  MPKMKSHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSPKTKRNLRKGGYVSKS-QEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|161524950|ref|YP_001579962.1| 50S ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
 gi|160342379|gb|ABX15465.1| ribosomal protein L35 [Burkholderia multivorans ATCC 17616]
          Length = 62

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT  S+ KRF +   G V+   A KRH + K++ K  R+ RG   +  +D   V R  L
Sbjct: 1  MKTKKSAAKRFVVRPGGTVKRGQAFKRHILTKKTTKNKRHLRGATAVHDSDLNSV-RAML 59

Query: 64 PN 65
          P 
Sbjct: 60 PF 61


>gi|225019252|ref|ZP_03708444.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
          DSM 5476]
 gi|224947883|gb|EEG29092.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
          DSM 5476]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S +KKRF +T  GKV+   A K H + K+S K  R  R        +   VI+
Sbjct: 1  MPKQKTHSGAKKRFKLTKNGKVKRAHAFKSHILNKKSTKRKRRLRQGTYADVTNTA-VIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KLIPY 64


>gi|317491932|ref|ZP_07950366.1| ribosomal protein L35 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920053|gb|EFV41378.1| ribosomal protein L35 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 65

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R    ++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGQVSKGDLGLVV 59


>gi|237737797|ref|ZP_04568278.1| LSU ribosomal protein L35P [Fusobacterium mortiferum ATCC 9817]
 gi|229419677|gb|EEO34724.1| LSU ribosomal protein L35P [Fusobacterium mortiferum ATCC 9817]
          Length = 68

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  ++KR  +T TGK   + +GK H + K+  K   N +   V+      + ++
Sbjct: 1  MPKMKTHRGARKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNNLKKDFVVTET-LTRHMQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 ALLPYGV 66


>gi|282890616|ref|ZP_06299139.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae
          str. Hall's coccus]
 gi|281499613|gb|EFB41909.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae
          str. Hall's coccus]
          Length = 64

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  +   RF +T TGK++    GKRH + K+S K  R      ++     K   R
Sbjct: 1  MPKMKTKKAVAARFKLTGTGKLKRGHPGKRHILTKKSPKRKRQLSKPALVDEGQLKTYKR 60

Query: 61 NY 62
            
Sbjct: 61 LM 62


>gi|160940542|ref|ZP_02087886.1| hypothetical protein CLOBOL_05437 [Clostridium bolteae ATCC
          BAA-613]
 gi|239625928|ref|ZP_04668959.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47_FAA]
 gi|158436502|gb|EDP14269.1| hypothetical protein CLOBOL_05437 [Clostridium bolteae ATCC
          BAA-613]
 gi|239520158|gb|EEQ60024.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47FAA]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK+    A K H + K+S K  RN R   ++  A   KV++
Sbjct: 1  MPKLKTSRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKD-IVTDATNSKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|319892726|ref|YP_004149601.1| LSU ribosomal protein L35p [Staphylococcus pseudintermedius
          HKU10-03]
 gi|317162422|gb|ADV05965.1| LSU ribosomal protein L35p [Staphylococcus pseudintermedius
          HKU10-03]
 gi|323464241|gb|ADX76394.1| ribosomal protein L35 [Staphylococcus pseudintermedius ED99]
          Length = 66

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +G+++   A   H    +S K  R  R   +++ +DAK+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGQLKRSRAYTSHLFANKSTKQKRQLRKASLVSKSDAKRVKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|257440571|ref|ZP_05616326.1| ribosomal protein L35 [Faecalibacterium prausnitzii A2-165]
 gi|257196894|gb|EEU95178.1| ribosomal protein L35 [Faecalibacterium prausnitzii A2-165]
          Length = 67

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+S +KKRF +T  GK++   A + H + K++ K  R  R    +   +A   I++ 
Sbjct: 5  KLKTHSGAKKRFKLTKNGKIKRGHAFRSHILTKKTTKLTRGYRQPNYVDKTNAA-TIKSM 63

Query: 63 LPN 65
          LP 
Sbjct: 64 LPY 66


>gi|108804141|ref|YP_644078.1| 50S ribosomal protein L35P [Rubrobacter xylanophilus DSM 9941]
 gi|124079017|sp|Q1AWG2|RL35_RUBXD RecName: Full=50S ribosomal protein L35
 gi|108765384|gb|ABG04266.1| LSU ribosomal protein L35P [Rubrobacter xylanophilus DSM 9941]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +  RF +   GK+R + AG  H + K+++K  R       +  AD K+V R
Sbjct: 1  MPKMKTHKGAAGRFEVMKRGKLRRRRAGHNHILEKKTSKRKRRLNTETYVNPADEKRVRR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|89094705|ref|ZP_01167641.1| ribosomal protein L35 [Oceanospirillum sp. MED92]
 gi|89081051|gb|EAR60287.1| ribosomal protein L35 [Oceanospirillum sp. MED92]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+NS + KRF  TA G  + + +   H + K+S K  R  R  + + +AD K ++R
Sbjct: 1  MPKMKSNSGAAKRFKKTANG-FKHKQSFTSHILTKKSTKRKRQLRPMLQVHAAD-KALVR 58

Query: 61 NYLPN 65
            LP 
Sbjct: 59 RMLPY 63


>gi|302670149|ref|YP_003830109.1| ribosomal protein L35 RpmI [Butyrivibrio proteoclasticus B316]
 gi|302394622|gb|ADL33527.1| ribosomal protein L35 RpmI [Butyrivibrio proteoclasticus B316]
          Length = 66

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  ++ KRF +T TGK+    A KRH + K+S K  RN R   ++ + +  K +++ 
Sbjct: 4  KMKTKRAAAKRFKVTGTGKLMRNKAYKRHILTKKSTKRKRNLRHAGLVDATNV-KAMKSI 62

Query: 63 LPN 65
          LP 
Sbjct: 63 LPY 65


>gi|220928737|ref|YP_002505646.1| ribosomal protein L35 [Clostridium cellulolyticum H10]
 gi|254802443|sp|B8I168|RL35_CLOCE RecName: Full=50S ribosomal protein L35
 gi|219999065|gb|ACL75666.1| ribosomal protein L35 [Clostridium cellulolyticum H10]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S+SKKRF +TATGK++   A + H +I +S K  ++ R    +++A     I+
Sbjct: 1  MPKLKTHSASKKRFRVTATGKIKRGQAWRNHRLISKSRKAKKHHRLGAYVSAAQEA-TIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KLIPY 64


>gi|260887111|ref|ZP_05898374.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|330839116|ref|YP_004413696.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|260863173|gb|EEX77673.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
 gi|329746880|gb|AEC00237.1| ribosomal protein L35 [Selenomonas sputigena ATCC 35185]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT  ++ KRFSIT +G+ +   A K H + K++ K  RN R   ++A+AD ++V 
Sbjct: 1  MPKVKTRRAAAKRFSITGSGEFKRNKAFKSHILEKKTRKRKRNLRKATLVAAADHRRVR 59


>gi|257452489|ref|ZP_05617788.1| 50S ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|257462307|ref|ZP_05626722.1| 50S ribosomal protein L35P [Fusobacterium sp. D12]
 gi|257466356|ref|ZP_05630667.1| 50S ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
 gi|315917512|ref|ZP_07913752.1| LSU ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
 gi|317059030|ref|ZP_07923515.1| LSU ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|317059974|ref|ZP_07924459.1| LSU ribosomal protein L35P [Fusobacterium sp. D12]
 gi|313684706|gb|EFS21541.1| LSU ribosomal protein L35P [Fusobacterium sp. 3_1_5R]
 gi|313685650|gb|EFS22485.1| LSU ribosomal protein L35P [Fusobacterium sp. D12]
 gi|313691387|gb|EFS28222.1| LSU ribosomal protein L35P [Fusobacterium gonidiaformans ATCC
          25563]
          Length = 68

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +  +V++    K+ ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIVKHSGKSHILTKKDRKRKNSLKKDLVVSET-LKRHMQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 GLLPYGV 66


>gi|238919784|ref|YP_002933299.1| 50S ribosomal protein L35 [Edwardsiella ictaluri 93-146]
 gi|269139160|ref|YP_003295861.1| 50S ribosomal protein L35 [Edwardsiella tarda EIB202]
 gi|259647353|sp|C5B848|RL35_EDWI9 RecName: Full=50S ribosomal protein L35
 gi|238869353|gb|ACR69064.1| ribosomal protein L35, putative [Edwardsiella ictaluri 93-146]
 gi|267984821|gb|ACY84650.1| 50S ribosomal protein L35 [Edwardsiella tarda EIB202]
 gi|304559084|gb|ADM41748.1| LSU ribosomal protein L35p [Edwardsiella tarda FL6-60]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R    ++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKSQVSKGDLGLVV 59


>gi|254518661|ref|ZP_05130717.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
 gi|226912410|gb|EEH97611.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R T  +++   +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKTAYVSTT-QEKAMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|90407013|ref|ZP_01215203.1| Ribosomal protein L35 [Psychromonas sp. CNPT3]
 gi|90311884|gb|EAS39979.1| Ribosomal protein L35 [Psychromonas sp. CNPT3]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G  + + +  RH + K+S K  R+ R   +++  D   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTASGGFKRKQSHLRHILTKKSTKRKRHLRSKSMVSKVDVASVIR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|160946416|ref|ZP_02093625.1| hypothetical protein PEPMIC_00376 [Parvimonas micra ATCC 33270]
 gi|158447532|gb|EDP24527.1| hypothetical protein PEPMIC_00376 [Parvimonas micra ATCC 33270]
          Length = 63

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T TGK++   A K H   K+S K IRN R + V++S D K++
Sbjct: 1  MAKMKTHRASAKRFKRTGTGKIKRFKAYKSHLTSKKSPKRIRNLRKSTVISSGDQKRI 58


>gi|109898812|ref|YP_662067.1| ribosomal protein L35 [Pseudoalteromonas atlantica T6c]
 gi|332306908|ref|YP_004434759.1| ribosomal protein L35 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|122971860|sp|Q15SX5|RL35_PSEA6 RecName: Full=50S ribosomal protein L35
 gi|109701093|gb|ABG41013.1| LSU ribosomal protein L35P [Pseudoalteromonas atlantica T6c]
 gi|332174237|gb|AEE23491.1| ribosomal protein L35 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G+ +++ +  RH + K+S+K  R+ RG  +   AD   + R
Sbjct: 1  MPKMKTNRGAAKRFRKTASGRFKSKQSHLRHILTKKSSKRKRHLRGKKLAHVADTALIQR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|313902055|ref|ZP_07835468.1| LSU ribosomal protein L35P [Thermaerobacter subterraneus DSM
          13965]
 gi|313467664|gb|EFR63165.1| LSU ribosomal protein L35P [Thermaerobacter subterraneus DSM
          13965]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  TA G+ + Q + + H   K++ K +R  R   VL  AD  + +R
Sbjct: 1  MPKMKTHRGAAKRFRRTARGRFKHQRSNRGHLNEKKTGKRMRRLRQPAVLGKADT-RTVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|87122882|ref|ZP_01078750.1| ribosomal protein L35 [Marinomonas sp. MED121]
 gi|86161833|gb|EAQ63130.1| ribosomal protein L35 [Marinomonas sp. MED121]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++S + KRF  TA G  + + +   H + K+S K  R+ R    +A++DA  + R
Sbjct: 1  MPKIKSHSGASKRFQRTANG-FKHKQSHTSHILTKKSTKRKRHLRSLNQVAASDAPLITR 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 -MCPY 63


>gi|302389960|ref|YP_003825781.1| LSU ribosomal protein L35P [Thermosediminibacter oceani DSM
          16646]
 gi|302200588|gb|ADL08158.1| LSU ribosomal protein L35P [Thermosediminibacter oceani DSM
          16646]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF +T  GK++   A K H +  +S K  R+ R    ++ AD K++ +
Sbjct: 1  MPKIKTHRGAAKRFDLTKKGKIKRAKANKSHLLAHKSQKRKRHLRKPAFVSKADYKRI-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 QLIPY 64


>gi|225375383|ref|ZP_03752604.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans
          DSM 16841]
 gi|225212872|gb|EEG95226.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans
          DSM 16841]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   ++ + + K + +
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRSKAYKRHILTKKTTKNKRNLRKPAMVDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|146307006|ref|YP_001187471.1| 50S ribosomal protein L35 [Pseudomonas mendocina ymp]
 gi|166199822|sp|A4XTS3|RL35_PSEMY RecName: Full=50S ribosomal protein L35
 gi|145575207|gb|ABP84739.1| LSU ribosomal protein L35P [Pseudomonas mendocina ymp]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA+G  + + A K H + K S K  R  RG+ ++  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTASG-YKHKHAFKSHILTKMSTKRKRQLRGSSLIGPSDVAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|116620341|ref|YP_822497.1| 50S ribosomal protein L35P [Candidatus Solibacter usitatus
          Ellin6076]
 gi|122255366|sp|Q029R4|RL35_SOLUE RecName: Full=50S ribosomal protein L35
 gi|116223503|gb|ABJ82212.1| LSU ribosomal protein L35P [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TG V    A  RH +  + +K  +    ++V   AD +KV++
Sbjct: 1  MPKLKTHKGASKRFKKTGTGLVVRNRAFGRHILTSKPHKRKKKLHQSVVADKAD-QKVLK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 RMLPY 64


>gi|303257523|ref|ZP_07343535.1| ribosomal protein L35 [Burkholderiales bacterium 1_1_47]
 gi|331000212|ref|ZP_08323896.1| ribosomal protein L35 [Parasutterella excrementihominis YIT
          11859]
 gi|302859493|gb|EFL82572.1| ribosomal protein L35 [Burkholderiales bacterium 1_1_47]
 gi|329572378|gb|EGG54031.1| ribosomal protein L35 [Parasutterella excrementihominis YIT
          11859]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF + + G ++   A KRH + KR+ K  R+ RG + ++ +D KK IR
Sbjct: 1  MPKMKTKKAASKRFKVRSGGSIKRAHATKRHILTKRTTKNKRHLRGMLTISESD-KKEIR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMMPY 64


>gi|254361944|ref|ZP_04978075.1| ribosomal protein L35 [Mannheimia haemolytica PHL213]
 gi|261493660|ref|ZP_05990179.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. BOVINE]
 gi|261494327|ref|ZP_05990821.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|153093491|gb|EDN74471.1| ribosomal protein L35 [Mannheimia haemolytica PHL213]
 gi|261309976|gb|EEY11185.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|261310660|gb|EEY11844.1| 50S ribosomal protein L35 [Mannheimia haemolytica serotype A2
          str. BOVINE]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R  R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQLRHKSMVAKADQVLVV 59


>gi|197284914|ref|YP_002150786.1| 50S ribosomal protein L35 [Proteus mirabilis HI4320]
 gi|227355317|ref|ZP_03839718.1| ribosomal protein L35 [Proteus mirabilis ATCC 29906]
 gi|226725050|sp|B4ETK8|RL35_PROMH RecName: Full=50S ribosomal protein L35
 gi|194682401|emb|CAR42258.1| 50S ribosomal subunit protein L35 [Proteus mirabilis HI4320]
 gi|227164541|gb|EEI49412.1| ribosomal protein L35 [Proteus mirabilis ATCC 29906]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGMISKGDLGLVV 59


>gi|254519561|ref|ZP_05131617.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
 gi|226913310|gb|EEH98511.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA]
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TGK++   A K H + K+S+K  RN R T  +++   +K ++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKRKRNLRKTSYVSTT-QEKAMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|161510985|ref|YP_088247.2| 50S ribosomal protein L35 [Mannheimia succiniciproducens MBEL55E]
 gi|118573011|sp|Q65TP8|RL35_MANSM RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|189501974|ref|YP_001957691.1| hypothetical protein Aasi_0561 [Candidatus Amoebophilus asiaticus
          5a2]
 gi|226713814|sp|B3ERW0|RL35_AMOA5 RecName: Full=50S ribosomal protein L35
 gi|189497415|gb|ACE05962.1| hypothetical protein Aasi_0561 [Candidatus Amoebophilus asiaticus
          5a2]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF++TA GK++ + A K H + K+  K  R    T ++  +D  ++ +
Sbjct: 1  MPKVKTHSGAKKRFALTAKGKIKRKHAFKNHMLDKKQTKQKRRLTHTALVHKSDKSRIEK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|153835368|ref|ZP_01988035.1| ribosomal protein L35 [Vibrio harveyi HY01]
 gi|156974366|ref|YP_001445273.1| 50S ribosomal protein L35 [Vibrio harveyi ATCC BAA-1116]
 gi|166233051|sp|A7N011|RL35_VIBHB RecName: Full=50S ribosomal protein L35
 gi|148868116|gb|EDL67280.1| ribosomal protein L35 [Vibrio harveyi HY01]
 gi|156525960|gb|ABU71046.1| hypothetical protein VIBHAR_02081 [Vibrio harveyi ATCC BAA-1116]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNALLPRCEVAAVVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|261855917|ref|YP_003263200.1| ribosomal protein L35 [Halothiobacillus neapolitanus c2]
 gi|261836386|gb|ACX96153.1| ribosomal protein L35 [Halothiobacillus neapolitanus c2]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+N  + KRF ITA G V+ + +  RH + K+S+K  R       +   D   +  
Sbjct: 1  MPKIKSNRGAAKRFKITAGG-VKRKQSHMRHILTKKSSKRKRQLGSPAFVHERDVPSI-H 58

Query: 61 NYLPN 65
            LP 
Sbjct: 59 IMLPY 63


>gi|300787906|ref|YP_003768197.1| 50S ribosomal protein L35 [Amycolatopsis mediterranei U32]
 gi|299797420|gb|ADJ47795.1| large subunit ribosomal protein L35 [Amycolatopsis mediterranei
          U32]
          Length = 64

 Score = 59.7 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S + KR   T TGK+R Q  G+RH M K+S++  R   GT  ++  +A ++ R
Sbjct: 1  MPKMKTHSGTSKRIRKTGTGKLRRQMTGRRHRMEKKSSRVTRRLEGTTEVSKTEAGRLKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|149191776|ref|ZP_01870014.1| 50S ribosomal protein L35 [Vibrio shilonii AK1]
 gi|312884192|ref|ZP_07743904.1| 50S ribosomal protein L35 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|148834356|gb|EDL51355.1| 50S ribosomal protein L35 [Vibrio shilonii AK1]
 gi|309368240|gb|EFP95780.1| 50S ribosomal protein L35 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 64

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVVR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|37526558|ref|NP_929902.1| 50S ribosomal protein L35 [Photorhabdus luminescens subsp.
          laumondii TTO1]
 gi|54036283|sp|Q7N3P8|RL35_PHOLL RecName: Full=50S ribosomal protein L35
 gi|36785989|emb|CAE15041.1| 50S ribosomal protein L35 [Photorhabdus luminescens subsp.
          laumondii TTO1]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKRANLRHILTKKSTKRKRHLRPKGMVSKGDLGLVV 59


>gi|253580169|ref|ZP_04857436.1| 50S ribosomal protein L35 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848688|gb|EES76651.1| 50S ribosomal protein L35 [Ruminococcus sp. 5_1_39BFAA]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R + V+ + + K + +
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKLVRNKAYKSHILTKKSQKRKRNLRKSTVVDATNVKSMKK 60

Query: 61 NY 62
            
Sbjct: 61 AL 62


>gi|160934429|ref|ZP_02081816.1| hypothetical protein CLOLEP_03302 [Clostridium leptum DSM 753]
 gi|156867102|gb|EDO60474.1| hypothetical protein CLOLEP_03302 [Clostridium leptum DSM 753]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ++  GKV    A K H + K++ K  R  R T V    +  +V R
Sbjct: 1  MPKIKTHSGAKKRFKLSKNGKVIRAHANKSHILNKKTTKRKRGLRKTTVADKTNVAQVKR 60


>gi|50086060|ref|YP_047570.1| 50S ribosomal protein L35 [Acinetobacter sp. ADP1]
 gi|260551937|ref|ZP_05825799.1| 50S ribosomal protein L35 [Acinetobacter sp. RUH2624]
 gi|293610411|ref|ZP_06692712.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|54036255|sp|Q6F867|RL35_ACIAD RecName: Full=50S ribosomal protein L35
 gi|49532036|emb|CAG69748.1| 50S ribosomal protein L35 [Acinetobacter sp. ADP1]
 gi|260405340|gb|EEW98835.1| 50S ribosomal protein L35 [Acinetobacter sp. RUH2624]
 gi|292827643|gb|EFF86007.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124567|gb|ADY84090.1| 50S ribosomal protein L35 [Acinetobacter calcoaceticus PHEA-2]
          Length = 64

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT   + KRF  TA G  + + A KRH + K+S K IR  RG +++  +D   V R
Sbjct: 1  MAKLKTRRGAAKRFKATANG-FKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDMNSVRR 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 -MCPY 63


>gi|291542634|emb|CBL15744.1| LSU ribosomal protein L35P [Ruminococcus bromii L2-63]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S +KKRF ++  GKV    A K H + K++ K  R  R T+     +  ++ R
Sbjct: 1  MPKIKTHSGAKKRFKLSKNGKVIRAHANKSHILNKKTTKRKRGLRQTVAADKTNTAQIKR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LIPY 64


>gi|166032009|ref|ZP_02234838.1| hypothetical protein DORFOR_01711 [Dorea formicigenerans ATCC
          27755]
 gi|166028462|gb|EDR47219.1| hypothetical protein DORFOR_01711 [Dorea formicigenerans ATCC
          27755]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R   +    + K + +
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRHATIADETNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|33152809|ref|NP_874162.1| 50S ribosomal protein L35 [Haemophilus ducreyi 35000HP]
 gi|54036293|sp|Q7VKS1|RL35_HAEDU RecName: Full=50S ribosomal protein L35
 gi|33149033|gb|AAP96551.1| 50S ribosomal protein L35 [Haemophilus ducreyi 35000HP]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+     ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLCHKSMVAKADQVLVV 59


>gi|294501487|ref|YP_003565187.1| 50S ribosomal protein L35 [Bacillus megaterium QM B1551]
 gi|295706835|ref|YP_003599910.1| 50S ribosomal protein L35 [Bacillus megaterium DSM 319]
 gi|294351424|gb|ADE71753.1| 50S ribosomal protein L35 [Bacillus megaterium QM B1551]
 gi|294804494|gb|ADF41560.1| 50S ribosomal protein L35 [Bacillus megaterium DSM 319]
          Length = 66

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R   +++  D K++ 
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRARAYTSHLFANKSTKQKRKLRKGSLVSKGDFKRIR 59


>gi|297583669|ref|YP_003699449.1| 50S ribosomal protein L35 [Bacillus selenitireducens MLS10]
 gi|297142126|gb|ADH98883.1| ribosomal protein L35 [Bacillus selenitireducens MLS10]
          Length = 62

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S + KRF  T +GK++   A   H    +S K  R  R   +++  D K++
Sbjct: 1  MPKMKTHSGASKRFKKTGSGKLKRGKAFTSHLAANKSQKQKRKLRKAGLVSKGDQKRI 58


>gi|153814479|ref|ZP_01967147.1| hypothetical protein RUMTOR_00692 [Ruminococcus torques ATCC
          27756]
 gi|145847973|gb|EDK24891.1| hypothetical protein RUMTOR_00692 [Ruminococcus torques ATCC
          27756]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R + +  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQSTITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|187250761|ref|YP_001875243.1| 50S ribosomal protein L35 [Elusimicrobium minutum Pei191]
 gi|226725008|sp|B2KB84|RL35_ELUMP RecName: Full=50S ribosomal protein L35
 gi|186970921|gb|ACC97906.1| Ribosomal protein L35 [Elusimicrobium minutum Pei191]
          Length = 67

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK-KVI 59
          MPK+K +S +KKRF+ TATGK + + AG++H +  +S    R  R T ++    A+ K++
Sbjct: 1  MPKLKNHSGAKKRFAKTATGKYKRRKAGRKHLLTPQSGSRKREMRQTGIIKPESAEGKLL 60

Query: 60 RNYLP 64
          + YLP
Sbjct: 61 KKYLP 65


>gi|116515021|ref|YP_802650.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Cc (Cinara
          cedri)]
 gi|122285583|sp|Q057Z2|RL35_BUCCC RecName: Full=50S ribosomal protein L35
 gi|116256875|gb|ABJ90557.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Cc (Cinara
          cedri)]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+G  + + A  RH + K++  + R  R  ++L+ +D KKV+ 
Sbjct: 1  MPKIKTLRSASKRFKKTASGLFKRKKANLRHILTKKNTNYKRCLRKKIILSLSDYKKVL- 59

Query: 61 NYLPN 65
           +LP 
Sbjct: 60 LFLPY 64


>gi|293396368|ref|ZP_06640646.1| 50S ribosomal protein L35 [Serratia odorifera DSM 4582]
 gi|291421157|gb|EFE94408.1| 50S ribosomal protein L35 [Serratia odorifera DSM 4582]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  T +G  + + A  RH + K++ K  R+ R   +++  D
Sbjct: 1  MPKIKTVRGAAKRFKKTGSGGFKRKHANLRHILTKKATKRKRHLRPKGMVSKND 54


>gi|229032219|ref|ZP_04188192.1| 50S ribosomal protein L35 [Bacillus cereus AH1271]
 gi|229175283|ref|ZP_04302798.1| 50S ribosomal protein L35 [Bacillus cereus MM3]
 gi|228608115|gb|EEK65422.1| 50S ribosomal protein L35 [Bacillus cereus MM3]
 gi|228728999|gb|EEL80002.1| 50S ribosomal protein L35 [Bacillus cereus AH1271]
          Length = 66

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T +GK++   A   H    +S K  R  R   V+++ D K++ +
Sbjct: 1  MPKQKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKAKRKLRKAGVVSAGDFKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|89101227|ref|ZP_01174053.1| 50S ribosomal protein L35 [Bacillus sp. NRRL B-14911]
 gi|89084056|gb|EAR63231.1| 50S ribosomal protein L35 [Bacillus sp. NRRL B-14911]
          Length = 66

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R   +++  D +++ 
Sbjct: 1  MPKMKTHRGTAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKAAIVSKGDFRRIR 59


>gi|322812602|pdb|3PYO|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 From
          The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
          File Contains The 50s Subunit Of The First 70s
          Ribosome.
 gi|322812655|pdb|3PYR|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 From
          The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
          File Contains The 50s Subunit Of The Second 70s
          Ribosome.
 gi|322812708|pdb|3PYT|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 Of
          Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
          Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812761|pdb|3PYV|5 Chain 5, Crystal Structure Of A Complex Containing Domain 3 Of
          Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
          Contains The 50s Subunit Of The Second 70s Ribosome
          Length = 63

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A+++ + 
Sbjct: 1  PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERI-KL 59

Query: 62 YLPN 65
           LP 
Sbjct: 60 LLPY 63


>gi|298530060|ref|ZP_07017462.1| ribosomal protein L35 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509434|gb|EFI33338.1| ribosomal protein L35 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 66

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRFSIT +GKV+ +   KRH + K++ K  R      ++  A+   V R
Sbjct: 1  MPKIKTRRCAAKRFSITGSGKVKRRQQNKRHILTKKNAKRKRRLGKPAIVDKANMSSVKR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|163801059|ref|ZP_02194959.1| 50S ribosomal protein L35 [Vibrio sp. AND4]
 gi|159175408|gb|EDP60205.1| 50S ribosomal protein L35 [Vibrio sp. AND4]
          Length = 64

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   VIR
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPRCEVAAVIR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|157370386|ref|YP_001478375.1| 50S ribosomal protein L35 [Serratia proteamaculans 568]
 gi|270261559|ref|ZP_06189832.1| 50S ribosomal protein L35 [Serratia odorifera 4Rx13]
 gi|166988037|sp|A8GDQ7|RL35_SERP5 RecName: Full=50S ribosomal protein L35
 gi|157322150|gb|ABV41247.1| ribosomal protein L35 [Serratia proteamaculans 568]
 gi|270045043|gb|EFA18134.1| 50S ribosomal protein L35 [Serratia odorifera 4Rx13]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T +G  + + A  RH + K++ K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTGSGGFKRKHANLRHILTKKATKRKRHLRPKGMVSKNDMVLVV 59


>gi|148244738|ref|YP_001219432.1| 50S ribosomal protein L35 [Candidatus Vesicomyosocius okutanii
          HA]
 gi|166233050|sp|A5CWF7|RL35_VESOH RecName: Full=50S ribosomal protein L35
 gi|146326565|dbj|BAF61708.1| 50S ribosomal protein L35 [Candidatus Vesicomyosocius okutanii
          HA]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + +  RH + K+S    R+ R    +   D   ++R
Sbjct: 1  MPKLKTNKGAAKRFKKTASGGYKCKHSHLRHILTKKSTSRKRSLRAPDSIEKVDIP-MVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KMLPY 64


>gi|15602468|ref|NP_245540.1| 50S ribosomal protein L35 [Pasteurella multocida subsp. multocida
          str. Pm70]
 gi|16273679|ref|NP_439470.1| 50S ribosomal protein L35 [Haemophilus influenzae Rd KW20]
 gi|32034416|ref|ZP_00134598.1| COG0291: Ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|126207712|ref|YP_001052937.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae L20]
 gi|161761264|ref|YP_249100.2| 50S ribosomal protein L35 [Haemophilus influenzae 86-028NP]
 gi|165975680|ref|YP_001651273.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
 gi|167856597|ref|ZP_02479299.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755]
 gi|190149495|ref|YP_001968020.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
 gi|219871990|ref|YP_002476365.1| 50S ribosomal protein L35 [Haemophilus parasuis SH0165]
 gi|240949009|ref|ZP_04753363.1| 50S ribosomal protein L35 [Actinobacillus minor NM305]
 gi|257465353|ref|ZP_05629724.1| 50S ribosomal protein L35 [Actinobacillus minor 202]
 gi|260914007|ref|ZP_05920481.1| 50S ribosomal protein L35 [Pasteurella dagmatis ATCC 43325]
 gi|303251654|ref|ZP_07337827.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|303252805|ref|ZP_07338965.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
 gi|307245036|ref|ZP_07527131.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|307247209|ref|ZP_07529259.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|307249437|ref|ZP_07531426.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|307251754|ref|ZP_07533657.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|307253990|ref|ZP_07535839.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|307256250|ref|ZP_07538035.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|307258445|ref|ZP_07540184.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|307260682|ref|ZP_07542372.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|307262814|ref|ZP_07544439.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
 gi|325578415|ref|ZP_08148550.1| 50S ribosomal protein L35 [Haemophilus parainfluenzae ATCC 33392]
 gi|54039224|sp|P67916|RL35_PASMU RecName: Full=50S ribosomal protein L35
 gi|54039225|sp|P67917|RL35_HAEIN RecName: Full=50S ribosomal protein L35
 gi|118573009|sp|Q4QKK7|RL35_HAEI8 RecName: Full=50S ribosomal protein L35
 gi|166231148|sp|A3MYU6|RL35_ACTP2 RecName: Full=50S ribosomal protein L35
 gi|226712605|sp|B3H066|RL35_ACTP7 RecName: Full=50S ribosomal protein L35
 gi|226712606|sp|B0BSM7|RL35_ACTPJ RecName: Full=50S ribosomal protein L35
 gi|254802454|sp|B8F7W5|RL35_HAEPS RecName: Full=50S ribosomal protein L35
 gi|12720874|gb|AAK02687.1| RpL35 [Pasteurella multocida subsp. multocida str. Pm70]
 gi|126096504|gb|ABN73332.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 5b str. L20]
 gi|165875781|gb|ABY68829.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
 gi|167852278|gb|EDS23590.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755]
 gi|189914626|gb|ACE60878.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
 gi|219692194|gb|ACL33417.1| 50S ribosomal protein L35 [Haemophilus parasuis SH0165]
 gi|240296596|gb|EER47214.1| 50S ribosomal protein L35 [Actinobacillus minor NM305]
 gi|257451013|gb|EEV25056.1| 50S ribosomal protein L35 [Actinobacillus minor 202]
 gi|260632094|gb|EEX50271.1| 50S ribosomal protein L35 [Pasteurella dagmatis ATCC 43325]
 gi|301156311|emb|CBW15782.1| 50S ribosomal subunit protein L35 [Haemophilus parainfluenzae
          T3T1]
 gi|302648366|gb|EFL78562.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
 gi|302649496|gb|EFL79679.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|306854060|gb|EFM86270.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|306856267|gb|EFM88420.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|306858511|gb|EFM90578.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|306860755|gb|EFM92765.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|306863053|gb|EFM94998.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|306865249|gb|EFM97147.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|306867487|gb|EFM99336.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|306869603|gb|EFN01390.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|306871829|gb|EFN03548.1| 50S ribosomal protein L35 [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
 gi|309750874|gb|ADO80858.1| 50S ribosomal protein L35 [Haemophilus influenzae R2866]
 gi|309973159|gb|ADO96360.1| 50S ribosomal protein L35 [Haemophilus influenzae R2846]
 gi|325160151|gb|EGC72280.1| 50S ribosomal protein L35 [Haemophilus parainfluenzae ATCC 33392]
          Length = 65

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|254369557|ref|ZP_04985568.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FSC022]
 gi|157122511|gb|EDO66646.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FSC022]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S + KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSGAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTNSLVQ 60

Query: 61 NY 62
            
Sbjct: 61 QM 62


>gi|154502801|ref|ZP_02039861.1| hypothetical protein RUMGNA_00615 [Ruminococcus gnavus ATCC
          29149]
 gi|153796684|gb|EDN79104.1| hypothetical protein RUMGNA_00615 [Ruminococcus gnavus ATCC
          29149]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401]
 gi|152970727|ref|YP_001335836.1| 50S ribosomal protein L35 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|213027671|ref|ZP_03342118.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
 gi|213423449|ref|ZP_03356432.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
 gi|213582474|ref|ZP_03364300.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
 gi|224584154|ref|YP_002637952.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
 gi|237705666|ref|ZP_04536147.1| 50S ribosomal subunit protein A [Escherichia sp. 3_2_53FAA]
 gi|238895233|ref|YP_002919968.1| 50S ribosomal protein L35 [Klebsiella pneumoniae NTUH-K2044]
 gi|283785059|ref|YP_003364924.1| 50S ribosomal subunit protein L35 [Citrobacter rodentium ICC168]
 gi|290509028|ref|ZP_06548399.1| 50S ribosomal protein L35 [Klebsiella sp. 1_1_55]
 gi|331642314|ref|ZP_08343449.1| ribosomal protein L35 [Escherichia coli H736]
 gi|331647208|ref|ZP_08348302.1| ribosomal protein L35 [Escherichia coli M605]
 gi|331653117|ref|ZP_08354122.1| ribosomal protein L35 [Escherichia coli M718]
 gi|331677590|ref|ZP_08378265.1| ribosomal protein L35 [Escherichia coli H591]
 gi|332279132|ref|ZP_08391545.1| 50S ribosomal subunit protein A [Shigella sp. D9]
 gi|62127557|gb|AAX65260.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
 gi|110615021|gb|ABF03688.1| 50S ribosomal subunit protein A [Shigella flexneri 5 str. 8401]
 gi|150955576|gb|ABR77606.1| 50S ribosomal protein L35 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|224468681|gb|ACN46511.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
 gi|226900423|gb|EEH86682.1| 50S ribosomal subunit protein A [Escherichia sp. 3_2_53FAA]
 gi|238547550|dbj|BAH63901.1| 50S ribosomal protein L35 [Klebsiella pneumoniae subsp.
          pneumoniae NTUH-K2044]
 gi|281600919|gb|ADA73903.1| 50S ribosomal protein L35 [Shigella flexneri 2002017]
 gi|282948513|emb|CBG88102.1| 50S ribosomal subunit protein L35 [Citrobacter rodentium ICC168]
 gi|289778422|gb|EFD86419.1| 50S ribosomal protein L35 [Klebsiella sp. 1_1_55]
 gi|322714390|gb|EFZ05961.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. A50]
 gi|323129606|gb|ADX17036.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 4/74]
 gi|323169352|gb|EFZ55028.1| ribosomal protein L35 [Shigella sonnei 53G]
 gi|323180495|gb|EFZ66040.1| ribosomal protein L35 [Escherichia coli 1180]
 gi|323186899|gb|EFZ72217.1| ribosomal protein L35 [Escherichia coli RN587/1]
 gi|325497122|gb|EGC94981.1| 50S ribosomal protein L35 [Escherichia fergusonii ECD227]
 gi|326623538|gb|EGE29883.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Dublin str. 3246]
 gi|326628015|gb|EGE34358.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 9]
 gi|331039112|gb|EGI11332.1| ribosomal protein L35 [Escherichia coli H736]
 gi|331043991|gb|EGI16127.1| ribosomal protein L35 [Escherichia coli M605]
 gi|331049215|gb|EGI21287.1| ribosomal protein L35 [Escherichia coli M718]
 gi|331074050|gb|EGI45370.1| ribosomal protein L35 [Escherichia coli H591]
 gi|332094001|gb|EGI99054.1| ribosomal protein L35 [Shigella dysenteriae 155-74]
 gi|332101484|gb|EGJ04830.1| 50S ribosomal subunit protein A [Shigella sp. D9]
 gi|332767220|gb|EGJ97415.1| ribosomal protein L35 [Shigella flexneri 2930-71]
          Length = 70

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 6  MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVI 64


>gi|152979113|ref|YP_001344742.1| 50S ribosomal protein L35 [Actinobacillus succinogenes 130Z]
 gi|171704319|sp|A6VPB0|RL35_ACTSZ RecName: Full=50S ribosomal protein L35
 gi|150840836|gb|ABR74807.1| ribosomal protein L35 [Actinobacillus succinogenes 130Z]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKAD 54


>gi|113461019|ref|YP_719086.1| 50S ribosomal protein L35 [Haemophilus somnus 129PT]
 gi|170717591|ref|YP_001784675.1| 50S ribosomal protein L35 [Haemophilus somnus 2336]
 gi|123327291|sp|Q0I3J0|RL35_HAES1 RecName: Full=50S ribosomal protein L35
 gi|189042772|sp|B0UU76|RL35_HAES2 RecName: Full=50S ribosomal protein L35
 gi|112823062|gb|ABI25151.1| LSU ribosomal protein L35P [Haemophilus somnus 129PT]
 gi|168825720|gb|ACA31091.1| ribosomal protein L35 [Haemophilus somnus 2336]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A AD   V+
Sbjct: 1  MPKIKTLRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVV 59


>gi|322833537|ref|YP_004213564.1| ribosomal protein L35 [Rahnella sp. Y9602]
 gi|321168738|gb|ADW74437.1| ribosomal protein L35 [Rahnella sp. Y9602]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA G  + + A  RH + K++ K  R+ R   +++  D
Sbjct: 1  MPKIKTVRGAAKRFKKTANGGFKRKHANLRHILTKKATKRKRHLRPKGLVSKND 54


>gi|146282710|ref|YP_001172863.1| 50S ribosomal protein L35 [Pseudomonas stutzeri A1501]
 gi|166199824|sp|A4VM20|RL35_PSEU5 RecName: Full=50S ribosomal protein L35
 gi|145570915|gb|ABP80021.1| ribosomal protein L35 [Pseudomonas stutzeri A1501]
 gi|327481049|gb|AEA84359.1| 50S ribosomal protein L35 [Pseudomonas stutzeri DSM 4166]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G  + + A K H + K + K  R  RG   +  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFKKTANG-FKHKHAFKSHILTKMTTKRKRQLRGCSQVHPSDVAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|118497779|ref|YP_898829.1| 50S ribosomal protein L35 [Francisella tularensis subsp. novicida
          U112]
 gi|167626330|ref|YP_001676830.1| 50S ribosomal protein L35 [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|194323751|ref|ZP_03057527.1| ribosomal protein L35 [Francisella tularensis subsp. novicida
          FTE]
 gi|208779842|ref|ZP_03247186.1| ribosomal protein L35 [Francisella novicida FTG]
 gi|241668763|ref|ZP_04756341.1| 50S ribosomal protein L35 [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|254373136|ref|ZP_04988625.1| 50S ribosomal protein L35 [Francisella tularensis subsp. novicida
          GA99-3549]
 gi|254374589|ref|ZP_04990070.1| 50S ribosomal protein L35 [Francisella novicida GA99-3548]
 gi|254877294|ref|ZP_05250004.1| 50S ribosomal protein L35 [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|166231186|sp|A0Q760|RL35_FRATN RecName: Full=50S ribosomal protein L35
 gi|189042770|sp|B0TY87|RL35_FRAP2 RecName: Full=50S ribosomal protein L35
 gi|118423685|gb|ABK90075.1| 50S ribosomal protein L35 [Francisella novicida U112]
 gi|151570863|gb|EDN36517.1| 50S ribosomal protein L35 [Francisella novicida GA99-3549]
 gi|151572308|gb|EDN37962.1| 50S ribosomal protein L35 [Francisella novicida GA99-3548]
 gi|167596331|gb|ABZ86329.1| 50S ribosomal protein L35 [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|194322115|gb|EDX19597.1| ribosomal protein L35 [Francisella tularensis subsp. novicida
          FTE]
 gi|208744297|gb|EDZ90597.1| ribosomal protein L35 [Francisella novicida FTG]
 gi|254843315|gb|EET21729.1| 50S ribosomal protein L35 [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|332184282|gb|AEE26536.1| LSU ribosomal protein L35p [Francisella cf. novicida 3523]
 gi|332678495|gb|AEE87624.1| LSU ribosomal protein L35p [Francisella cf. novicida Fx1]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S + KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSGAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTASLVQ 60

Query: 61 NY 62
            
Sbjct: 61 QM 62


>gi|293376473|ref|ZP_06622702.1| ribosomal protein L35 [Turicibacter sanguinis PC909]
 gi|325842053|ref|ZP_08167590.1| ribosomal protein L35 [Turicibacter sp. HGF1]
 gi|292644895|gb|EFF62976.1| ribosomal protein L35 [Turicibacter sanguinis PC909]
 gi|325489775|gb|EGC92131.1| ribosomal protein L35 [Turicibacter sp. HGF1]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++  + KRF  T +GK++   A   H    ++ K  ++     V++++D K++ 
Sbjct: 1  MPKMKSHRGAAKRFKRTGSGKLKRSHAYTSHLAHNKTTKQKKHLAKAAVVSNSDYKRIK 59


>gi|290968293|ref|ZP_06559835.1| ribosomal protein L35 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781652|gb|EFD94238.1| ribosomal protein L35 [Megasphaera genomosp. type_1 str. 28L]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF+ T TGKV+     K H +  +S K  RN R   +++    + V +
Sbjct: 1  MPKLKTRRAAAKRFTTTGTGKVKRMKPYKSHILESKSPKRKRNLRKATLVSKTMTEAVRK 60


>gi|307131175|ref|YP_003883191.1| 50S ribosomal subunit protein L35 [Dickeya dadantii 3937]
 gi|306528704|gb|ADM98634.1| 50S ribosomal subunit protein L35 [Dickeya dadantii 3937]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA+G  + + A  RH + K++ K  R+ R   +++  D
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKATKRKRHLRPKGMVSKGD 54


>gi|303325497|ref|ZP_07355940.1| ribosomal protein L35 [Desulfovibrio sp. 3_1_syn3]
 gi|302863413|gb|EFL86344.1| ribosomal protein L35 [Desulfovibrio sp. 3_1_syn3]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T +GK + +    RH + K++           ++ S + K V R
Sbjct: 1  MPKIKTRRAAAKRFQLTGSGKYKRRRQNLRHILTKKAPGRKMRLGQATLVDSTNEKAVRR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -MLPNG 65


>gi|225568222|ref|ZP_03777247.1| hypothetical protein CLOHYLEM_04296 [Clostridium hylemonae DSM
          15053]
 gi|225162941|gb|EEG75560.1| hypothetical protein CLOHYLEM_04296 [Clostridium hylemonae DSM
          15053]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK+    A K H + K+S K  RN R   V  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKPTVTDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|328862293|gb|EGG11394.1| hypothetical protein MELLADRAFT_74050 [Melampsora larici-populina
           98AG31]
          Length = 181

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT+  + KRF +T  G+ +   AGK+H M   S+   R  +  +++      K +R  
Sbjct: 62  KLKTHQGASKRFFVTGHGQFKRSQAGKQHLMTGTSHSKKRKLKPMIIVNKTHTTK-LRKL 120

Query: 63  LPN 65
           LP 
Sbjct: 121 LPY 123


>gi|206901554|ref|YP_002251026.1| ribosomal protein L35 [Dictyoglomus thermophilum H-6-12]
 gi|226724998|sp|B5YER8|RL35_DICT6 RecName: Full=50S ribosomal protein L35
 gi|206740657|gb|ACI19715.1| ribosomal protein L35 [Dictyoglomus thermophilum H-6-12]
          Length = 66

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT SS+ KRF +TATGK+  + AGKRH + K+S    R       + S D  KV R
Sbjct: 1  MSKLKTRSSAAKRFKVTATGKILHKKAGKRHNLSKKSKARKRRLDIPGEIKSVDRWKVER 60

Query: 61 NYLPNGI 67
            LP  +
Sbjct: 61 -MLPYNL 66


>gi|224372471|ref|YP_002606843.1| ribosomal protein L35 [Nautilia profundicola AmH]
 gi|254802463|sp|B9L885|RL35_NAUPA RecName: Full=50S ribosomal protein L35
 gi|223588815|gb|ACM92551.1| ribosomal protein L35 [Nautilia profundicola AmH]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +  +GK++  AA + H + K+S K  RN R    + S + K V  
Sbjct: 1  MPKMKTNRGAAKRFKVKKSGKIKRGAAYRSHILTKKSQKRKRNLRAPKYVDSTNIKAVRE 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|169831541|ref|YP_001717523.1| 50S ribosomal protein L35 [Candidatus Desulforudis audaxviator
          MP104C]
 gi|226724995|sp|B1I4I9|RL35_DESAP RecName: Full=50S ribosomal protein L35
 gi|169638385|gb|ACA59891.1| ribosomal protein L35 [Candidatus Desulforudis audaxviator
          MP104C]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KRF  T TGK R + A   H + K+S K  R  R   VL++ D +++ R
Sbjct: 1  MPKIKTHRGAAKRFKKTGTGKFRTKHAFLSHILEKKSAKRKRRLRKKFVLSAGDVRRI-R 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 AMIPY 64


>gi|15615701|ref|NP_244005.1| 50S ribosomal protein L35 [Bacillus halodurans C-125]
 gi|20139765|sp|Q9K868|RL35_BACHD RecName: Full=50S ribosomal protein L35
 gi|10175761|dbj|BAB06858.1| 50S ribosomal protein L35 [Bacillus halodurans C-125]
          Length = 66

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T +GK++   A   H    +S K  R  R + ++ S D K++  
Sbjct: 1  MPKMKTHKGAAKRFKKTGSGKLKRSHAFTSHLFANKSQKQKRKLRKSAIVHSGDFKRIRE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|317500521|ref|ZP_07958744.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089379|ref|ZP_08338278.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898110|gb|EFV20158.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404747|gb|EGG84285.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN +  KRF  T TGK++   A K H + K+S K  RN R + +  + + K + +
Sbjct: 1  MPKIKTNRAVAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQSTITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|229829198|ref|ZP_04455267.1| hypothetical protein GCWU000342_01285 [Shuttleworthia satelles
          DSM 14600]
 gi|229792361|gb|EEP28475.1| hypothetical protein GCWU000342_01285 [Shuttleworthia satelles
          DSM 14600]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF+ T +GK++   A K H + K++ K  RN R + +  +++ K + +
Sbjct: 1  MPKMKTKRAAAKRFTATGSGKLKRNKAFKSHILTKKTTKRKRNLRQSAITDASNVKSLKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|123442191|ref|YP_001006172.1| 50S ribosomal protein L35 [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|238749480|ref|ZP_04610985.1| 50S ribosomal protein L35 [Yersinia rohdei ATCC 43380]
 gi|332161613|ref|YP_004298190.1| 50S ribosomal protein L35 [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|166233052|sp|A1JMK4|RL35_YERE8 RecName: Full=50S ribosomal protein L35
 gi|122089152|emb|CAL11994.1| 50S ribosomal protein L35 [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|238712135|gb|EEQ04348.1| 50S ribosomal protein L35 [Yersinia rohdei ATCC 43380]
 gi|318605896|emb|CBY27394.1| LSU ribosomal protein L35p [Yersinia enterocolitica subsp.
          palearctica Y11]
 gi|325665843|gb|ADZ42487.1| 50S ribosomal protein L35 [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|330861021|emb|CBX71293.1| 50S ribosomal protein L35 [Yersinia enterocolitica W22703]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   V+
Sbjct: 1  MPKIKTVRGAAKRFKKTGAGGFKRKHANLRHILTKKATKRKRHLRPKGMVSKNDLGLVV 59


>gi|268608874|ref|ZP_06142601.1| 50S ribosomal protein L35P [Ruminococcus flavefaciens FD-1]
          Length = 67

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT+S +KKRF IT TGKV+ Q   KRH + ++  K  R AR   V    +A  + +
Sbjct: 5  KVKTHSGAKKRFKITGTGKVKYQHTNKRHRLTQKDTKRKRIARNAGVADCTNAPTIKK 62


>gi|193211791|ref|YP_001997744.1| 50S ribosomal protein L35 [Chlorobaculum parvum NCIB 8327]
 gi|226724980|sp|B3QRM2|RL35_CHLP8 RecName: Full=50S ribosomal protein L35
 gi|193085268|gb|ACF10544.1| ribosomal protein L35 [Chlorobaculum parvum NCIB 8327]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T +GKV+ +     H +  ++ K  R    + ++ S   K++ R
Sbjct: 1  MPKMKSHRGACKRFKATGSGKVKRERMNGSHNLEHKNRKRTRRLHQSTLVDSTKEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|33862217|ref|NP_893778.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp.
          pastoris str. CCMP1986]
 gi|54036289|sp|Q7UZK2|RL35_PROMP RecName: Full=50S ribosomal protein L35
 gi|33634435|emb|CAE20120.1| 50S ribosomal protein L35 [Prochlorococcus marinus subsp.
          pastoris str. CCMP1986]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  S+ KRF  TATGK   + A   H +  +S+K  R+ +   V+   DA  V +
Sbjct: 1  MSKLKTRKSAAKRFKATATGKFTRRRAFHNHLLDHKSSKLKRHLKTKAVVDERDADNV-K 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 LMIPY 64


>gi|260774300|ref|ZP_05883215.1| LSU ribosomal protein L35p [Vibrio metschnikovii CIP 69.14]
 gi|20139687|sp|Q9ALJ2|RL35_VIBME RecName: Full=50S ribosomal protein L35
 gi|12831414|gb|AAK02072.1| large subunit ribosomal protein L35 [Vibrio metschnikovii]
 gi|260611261|gb|EEX36465.1| LSU ribosomal protein L35p [Vibrio metschnikovii CIP 69.14]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSILPKCEVAGVMR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|295696882|ref|YP_003590120.1| ribosomal protein L35 [Bacillus tusciae DSM 2912]
 gi|295412484|gb|ADG06976.1| ribosomal protein L35 [Bacillus tusciae DSM 2912]
          Length = 66

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  ++ KRF  T +GK++   A   H    ++ K  R  R   +++  D K+V 
Sbjct: 1  MPKMKTQRAAAKRFRKTGSGKLKRFHAYHSHLFTGKTPKRKRKLRKAALVSKGDFKRVR 59


>gi|152989862|ref|YP_001355584.1| 50S ribosomal protein L35 [Nitratiruptor sp. SB155-2]
 gi|166231206|sp|A6Q168|RL35_NITSB RecName: Full=50S ribosomal protein L35
 gi|151421723|dbj|BAF69227.1| 50S ribosomal protein L35 [Nitratiruptor sp. SB155-2]
          Length = 64

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T   K++  +A + H + K+S K  R+ R    ++  D  +VI
Sbjct: 1  MPKMKTHRGAAKRFKKTKN-KIKRGSAFRSHILTKKSPKTKRHLRAPHYVSKVDEPRVI 58


>gi|256819831|ref|YP_003141110.1| 50S ribosomal protein L35 [Capnocytophaga ochracea DSM 7271]
 gi|315225230|ref|ZP_07867047.1| 50S ribosomal protein L35 [Capnocytophaga ochracea F0287]
 gi|256581414|gb|ACU92549.1| ribosomal protein L35 [Capnocytophaga ochracea DSM 7271]
 gi|314944913|gb|EFS96945.1| 50S ribosomal protein L35 [Capnocytophaga ochracea F0287]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T +GK++ + A K H + K++ K         ++ S D   V +
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSHILTKKAKKRKLALTHATLVHSNDEASVKK 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P [Fusobacterium nucleatum subsp.
          nucleatum ATCC 25586]
 gi|34764974|ref|ZP_00145301.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
 gi|237739651|ref|ZP_04570132.1| LSU ribosomal protein L35P [Fusobacterium sp. 2_1_31]
 gi|237742397|ref|ZP_04572878.1| LSU ribosomal protein L35P [Fusobacterium sp. 4_1_13]
 gi|256845725|ref|ZP_05551183.1| ribosomal protein L35 [Fusobacterium sp. 3_1_36A2]
 gi|262066669|ref|ZP_06026281.1| ribosomal protein L35 [Fusobacterium periodonticum ATCC 33693]
 gi|294783292|ref|ZP_06748616.1| ribosomal protein L35 [Fusobacterium sp. 1_1_41FAA]
 gi|294785029|ref|ZP_06750317.1| ribosomal protein L35 [Fusobacterium sp. 3_1_27]
 gi|296327260|ref|ZP_06869815.1| 50S ribosomal protein L35 [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
 gi|118573008|sp|Q8RGH1|RL35_FUSNN RecName: Full=50S ribosomal protein L35
 gi|19713789|gb|AAL94530.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          nucleatum ATCC 25586]
 gi|27885686|gb|EAA23101.1| LSU ribosomal protein L35P [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
 gi|229423259|gb|EEO38306.1| LSU ribosomal protein L35P [Fusobacterium sp. 2_1_31]
 gi|229430045|gb|EEO40257.1| LSU ribosomal protein L35P [Fusobacterium sp. 4_1_13]
 gi|256719284|gb|EEU32839.1| ribosomal protein L35 [Fusobacterium sp. 3_1_36A2]
 gi|291379628|gb|EFE87146.1| ribosomal protein L35 [Fusobacterium periodonticum ATCC 33693]
 gi|294480170|gb|EFG27947.1| ribosomal protein L35 [Fusobacterium sp. 1_1_41FAA]
 gi|294486743|gb|EFG34105.1| ribosomal protein L35 [Fusobacterium sp. 3_1_27]
 gi|296155617|gb|EFG96379.1| 50S ribosomal protein L35 [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
          Length = 68

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +   V+     K+ ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNHLKKDAVVTET-YKRHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|251789560|ref|YP_003004281.1| 50S ribosomal protein L35 [Dickeya zeae Ech1591]
 gi|271500482|ref|YP_003333507.1| 50S ribosomal protein L35 [Dickeya dadantii Ech586]
 gi|247538181|gb|ACT06802.1| ribosomal protein L35 [Dickeya zeae Ech1591]
 gi|270344037|gb|ACZ76802.1| ribosomal protein L35 [Dickeya dadantii Ech586]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA+G  + + A  RH + K++ K  R+ R   +++  D
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKHANLRHILTKKATKRKRHLRPKAMVSKGD 54


>gi|229827028|ref|ZP_04453097.1| hypothetical protein GCWU000182_02412 [Abiotrophia defectiva ATCC
          49176]
 gi|229788646|gb|EEP24760.1| hypothetical protein GCWU000182_02412 [Abiotrophia defectiva ATCC
          49176]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++ KRF +T TGK+    A K H + K++ K  RN R    +  ++   + R
Sbjct: 1  MPKMKTKSAAAKRFKVTGTGKLMKMKAYKSHILTKKTTKRKRNLRKATEIDKSNLAPMKR 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|212704420|ref|ZP_03312548.1| hypothetical protein DESPIG_02475 [Desulfovibrio piger ATCC
          29098]
 gi|212672141|gb|EEB32624.1| hypothetical protein DESPIG_02475 [Desulfovibrio piger ATCC
          29098]
          Length = 65

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF +T +GK + +    RH + K++           ++   + K V R
Sbjct: 1  MPKIKTRRSAAKRFELTGSGKFKRRRQNLRHILTKKAPGRKMRLGQAAIVDRTNEKAVRR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -MLPNG 65


>gi|331090830|ref|ZP_08339676.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399689|gb|EGG79351.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 65

 Score = 58.9 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TATGK++   A K H + K+S K  RN R   +  +++ K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTATGKLKRNKAYKSHILTKKSTKRKRNLRQATITDASNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|326201564|ref|ZP_08191435.1| ribosomal protein L35 [Clostridium papyrosolvens DSM 2782]
 gi|325988164|gb|EGD48989.1| ribosomal protein L35 [Clostridium papyrosolvens DSM 2782]
          Length = 65

 Score = 58.9 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+S+SKKRF +TATGK++   A + H ++ +S K  ++ R    +++A     I+
Sbjct: 1  MPKLKTHSASKKRFRVTATGKIKRGQAWRNHRLVSKSRKAKKHHRLGAYVSAAQEA-TIK 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 KLIPY 64


>gi|311031379|ref|ZP_07709469.1| 50S ribosomal protein L35 [Bacillus sp. m3-13]
          Length = 66

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  S KRF  T +G ++   A   H    +S K  R  R + +++  D K++ 
Sbjct: 1  MPKMKTHRGSAKRFKKTGSGSLKRSHAYTSHLFANKSQKQKRKLRKSAMVSKGDFKRIR 59


>gi|121997232|ref|YP_001002019.1| ribosomal protein L35 [Halorhodospira halophila SL1]
 gi|166231190|sp|A1WU55|RL35_HALHL RecName: Full=50S ribosomal protein L35
 gi|121588637|gb|ABM61217.1| LSU ribosomal protein L35P [Halorhodospira halophila SL1]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF + A+G++    +   H + K+  K  R  R    + ++DA  V R
Sbjct: 1  MPKLKTNRGAAKRFKVKASGRISRARSNHSHILTKKDPKRKRRLRELTEVHASDAPMVRR 60


>gi|330719622|gb|EGG98192.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC2047]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R  RG   + +AD K +++
Sbjct: 1  MPKIKSNSGAAKRFKKTANG-FKHKQSFRSHILTKKSTKRKRQLRGMQQIHAAD-KALVQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|251792479|ref|YP_003007205.1| 50S ribosomal protein L35 [Aggregatibacter aphrophilus NJ8700]
 gi|315634193|ref|ZP_07889482.1| 50S ribosomal protein L35 [Aggregatibacter segnis ATCC 33393]
 gi|247533872|gb|ACS97118.1| ribosomal protein L35 [Aggregatibacter aphrophilus NJ8700]
 gi|315477443|gb|EFU68186.1| 50S ribosomal protein L35 [Aggregatibacter segnis ATCC 33393]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA+G  + + +  RH + K++ K  R+ R   ++A +D
Sbjct: 1  MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKSD 54


>gi|260062394|ref|YP_003195474.1| 50S ribosomal protein L35 [Robiginitalea biformata HTCC2501]
 gi|88783957|gb|EAR15128.1| ribosomal protein L35 [Robiginitalea biformata HTCC2501]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K       + ++  AD   +  
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLKLTHSTLVHPADEDNIKE 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|255324638|ref|ZP_05365755.1| ribosomal protein L35 [Corynebacterium tuberculostearicum SK141]
 gi|311740495|ref|ZP_07714322.1| 50S ribosomal protein L35 [Corynebacterium pseudogenitalium ATCC
          33035]
 gi|255298544|gb|EET77844.1| ribosomal protein L35 [Corynebacterium tuberculostearicum SK141]
 gi|311304015|gb|EFQ80091.1| 50S ribosomal protein L35 [Corynebacterium pseudogenitalium ATCC
          33035]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + AG+RH +  + +K  R  +GT  +A  D K+V R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGRRHLLEGKPSKRTRRLKGTEAVAQPDTKRVKRLL 61


>gi|16331324|ref|NP_442052.1| 50S ribosomal protein L35 [Synechocystis sp. PCC 6803]
 gi|1350730|sp|P48959|RL35_SYNY3 RecName: Full=50S ribosomal protein L35
 gi|1001497|dbj|BAA10122.1| 50S ribosomal protein L35 [Synechocystis sp. PCC 6803]
          Length = 67

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T +G K+  + A K H +  +S++   R      ++  AD K V
Sbjct: 1  MPKLKTRKAAAKRFRPTGSGKKIIRRKAFKNHLLEHKSSEQKHRRLSNLALVHEADEKNV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|317129889|ref|YP_004096171.1| ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
 gi|315474837|gb|ADU31440.1| ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
          Length = 62

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+S + KRF  T TGK++       H    +S K  R  R   +++ +D K++
Sbjct: 1  MPKMKTHSGASKRFKKTGTGKLKRAHGYTSHLAANKSQKQKRKLRKGALVSKSDQKRI 58


>gi|237744049|ref|ZP_04574530.1| LSU ribosomal protein L35P [Fusobacterium sp. 7_1]
 gi|256028151|ref|ZP_05441985.1| 50S ribosomal protein L35P [Fusobacterium sp. D11]
 gi|260494366|ref|ZP_05814497.1| ribosomal protein L35 [Fusobacterium sp. 3_1_33]
 gi|289766087|ref|ZP_06525465.1| LSU ribosomal protein L35P [Fusobacterium sp. D11]
 gi|229431278|gb|EEO41490.1| LSU ribosomal protein L35P [Fusobacterium sp. 7_1]
 gi|260198512|gb|EEW96028.1| ribosomal protein L35 [Fusobacterium sp. 3_1_33]
 gi|289717642|gb|EFD81654.1| LSU ribosomal protein L35P [Fusobacterium sp. D11]
          Length = 68

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +   V+     KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIIKHSGKSHILTKKDRKRKNHLKKDAVVNET-YKKHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|213963325|ref|ZP_03391581.1| ribosomal protein L35 [Capnocytophaga sputigena Capno]
 gi|213953993|gb|EEB65319.1| ribosomal protein L35 [Capnocytophaga sputigena Capno]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T +GK++ + A K H + K++ K         ++ S D   V +
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSHILTKKAKKRKLALTHATLVHSNDESSVKK 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|49082302|gb|AAT50551.1| PA2742 [synthetic construct]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K + K  R  RGT +L  +D  +V R
Sbjct: 1  MPKMKTKSGAAKRFKKTAGG-LKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVER 59

Query: 61 NY 62
          + 
Sbjct: 60 SL 61


>gi|299830369|ref|YP_003734584.1| ribosomal protein L35 [Kryptoperidinium foliaceum]
 gi|297385071|gb|ADI40369.1| ribosomal protein L35 [Kryptoperidinium foliaceum]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+ +T  G    + A K H ++K+SNK  R     + +  +D   + +
Sbjct: 1  MPKLKTRKAAAKRYKVTGNGNFLRRHAFKGHLLMKKSNKQKRKLSQVLCVKPSDTAAI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|269102904|ref|ZP_06155601.1| LSU ribosomal protein L35p [Photobacterium damselae subsp.
          damselae CIP 102761]
 gi|268162802|gb|EEZ41298.1| LSU ribosomal protein L35p [Photobacterium damselae subsp.
          damselae CIP 102761]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  T  G  + + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKSNKGAAKRFKKTGGG-FKYKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|160878606|ref|YP_001557574.1| ribosomal protein L35 [Clostridium phytofermentans ISDg]
 gi|189042763|sp|A9KHG8|RL35_CLOPH RecName: Full=50S ribosomal protein L35
 gi|160427272|gb|ABX40835.1| ribosomal protein L35 [Clostridium phytofermentans ISDg]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF +T TGK++   AGK+H + K+S K  RN R   ++  ++ K + +
Sbjct: 1  MPKLKTSKAAAKRFKVTGTGKLKRMKAGKQHILTKKSQKTKRNLRKATMMDPSNEKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|215486936|ref|YP_002329367.1| 50S ribosomal protein L35 [Escherichia coli O127:H6 str.
          E2348/69]
 gi|254802450|sp|B7USA0|RL35_ECO27 RecName: Full=50S ribosomal protein L35
 gi|215265008|emb|CAS09394.1| 50S ribosomal subunit protein L35 [Escherichia coli O127:H6 str.
          E2348/69]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   +I
Sbjct: 1  MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLII 59


>gi|210615123|ref|ZP_03290454.1| hypothetical protein CLONEX_02670 [Clostridium nexile DSM 1787]
 gi|210150431|gb|EEA81440.1| hypothetical protein CLONEX_02670 [Clostridium nexile DSM 1787]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  TATGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTATGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|56707930|ref|YP_169826.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|89256698|ref|YP_514060.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica LVS]
 gi|110670401|ref|YP_666958.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis FSC198]
 gi|115315105|ref|YP_763828.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica OSU18]
 gi|134301674|ref|YP_001121642.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis WY96-3418]
 gi|167010450|ref|ZP_02275381.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FSC200]
 gi|187931725|ref|YP_001891710.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          mediasiatica FSC147]
 gi|224457010|ref|ZP_03665483.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|254368005|ref|ZP_04984025.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica 257]
 gi|254370418|ref|ZP_04986423.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis FSC033]
 gi|254874735|ref|ZP_05247445.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|81677068|sp|Q5NGL6|RL35_FRATT RecName: Full=50S ribosomal protein L35
 gi|122324893|sp|Q0BL43|RL35_FRATO RecName: Full=50S ribosomal protein L35
 gi|122970977|sp|Q14I18|RL35_FRAT1 RecName: Full=50S ribosomal protein L35
 gi|148887074|sp|Q2A2J2|RL35_FRATH RecName: Full=50S ribosomal protein L35
 gi|166231187|sp|A4IX70|RL35_FRATW RecName: Full=50S ribosomal protein L35
 gi|226725014|sp|B2SGS1|RL35_FRATM RecName: Full=50S ribosomal protein L35
 gi|56604422|emb|CAG45452.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|89144529|emb|CAJ79844.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica LVS]
 gi|110320734|emb|CAL08835.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis FSC198]
 gi|115130004|gb|ABI83191.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          OSU18]
 gi|134049451|gb|ABO46522.1| ribosomal protein L35 [Francisella tularensis subsp. tularensis
          WY96-3418]
 gi|134253815|gb|EBA52909.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica 257]
 gi|151568661|gb|EDN34315.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis FSC033]
 gi|187712634|gb|ACD30931.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          mediasiatica FSC147]
 gi|254840734|gb|EET19170.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|282159113|gb|ADA78504.1| ribosomal protein L35 [Francisella tularensis subsp. tularensis
          NE061598]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S + KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSGAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTTSLVQ 60

Query: 61 NY 62
            
Sbjct: 61 QM 62


>gi|330850843|ref|YP_004376593.1| 50S ribosomal protein L35 [Fistulifera sp. JPCC DA0580]
 gi|328835663|dbj|BAK18959.1| 50S ribosomal protein L35 [Fistulifera sp. JPCC DA0580]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+ +T TG    + A K H ++ +SN+  R     + ++ +D++K+ +
Sbjct: 1  MPKLKTRKAAAKRYKVTGTGNFLRRHAYKGHLLMHKSNRQKRKLSQKICVSLSDSRKI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|257455763|ref|ZP_05620989.1| ribosomal protein L35 [Enhydrobacter aerosaccus SK60]
 gi|257446777|gb|EEV21794.1| ribosomal protein L35 [Enhydrobacter aerosaccus SK60]
          Length = 63

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT   + KRF  T  G ++ + A KRH + K+S K IR  RG  ++  +D K+V R
Sbjct: 2  KLKTRRGAAKRFKKTGNG-IKRKQAFKRHILTKKSPKRIRQLRGCKLVHVSDEKRVYR 58


>gi|302794222|ref|XP_002978875.1| hypothetical protein SELMODRAFT_444022 [Selaginella moellendorffii]
 gi|300153193|gb|EFJ19832.1| hypothetical protein SELMODRAFT_444022 [Selaginella moellendorffii]
          Length = 159

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 35/59 (59%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
           K+KT+ +S KRF +T  G +  + AGK+H ++K+++K  +     + +  +D   ++R 
Sbjct: 60  KLKTHKASAKRFKVTGGGILMRRRAGKQHLLVKKNSKRRKRLSKLVPVKRSDYTGIVRA 118


>gi|167749028|ref|ZP_02421155.1| hypothetical protein ANACAC_03809 [Anaerostipes caccae DSM 14662]
 gi|317472573|ref|ZP_07931892.1| ribosomal protein L35 [Anaerostipes sp. 3_2_56FAA]
 gi|167651650|gb|EDR95779.1| hypothetical protein ANACAC_03809 [Anaerostipes caccae DSM 14662]
 gi|316899982|gb|EFV21977.1| ribosomal protein L35 [Anaerostipes sp. 3_2_56FAA]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK++   A K H + K+S K  RN R + V  S +A KV++
Sbjct: 1  MPKVKTCRAAAKRFKKTGTGKLKRNKAYKSHILTKKSPKRKRNLRKSAVTDSTNA-KVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|24373854|ref|NP_717897.1| 50S ribosomal protein L35 [Shewanella oneidensis MR-1]
 gi|113970294|ref|YP_734087.1| 50S ribosomal protein L35 [Shewanella sp. MR-4]
 gi|114047515|ref|YP_738065.1| 50S ribosomal protein L35 [Shewanella sp. MR-7]
 gi|117920489|ref|YP_869681.1| 50S ribosomal protein L35 [Shewanella sp. ANA-3]
 gi|54036311|sp|Q8EER7|RL35_SHEON RecName: Full=50S ribosomal protein L35
 gi|123029659|sp|Q0HIT7|RL35_SHESM RecName: Full=50S ribosomal protein L35
 gi|123326547|sp|Q0HV47|RL35_SHESR RecName: Full=50S ribosomal protein L35
 gi|166199837|sp|A0KWV6|RL35_SHESA RecName: Full=50S ribosomal protein L35
 gi|24348261|gb|AAN55341.1|AE015671_8 ribosomal protein L35 [Shewanella oneidensis MR-1]
 gi|113884978|gb|ABI39030.1| LSU ribosomal protein L35P [Shewanella sp. MR-4]
 gi|113888957|gb|ABI43008.1| LSU ribosomal protein L35P [Shewanella sp. MR-7]
 gi|117612821|gb|ABK48275.1| LSU ribosomal protein L35P [Shewanella sp. ANA-3]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   ++A  D   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRNKCLVAKVDVPAIAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 Q-LPY 63


>gi|146329780|ref|YP_001209436.1| 50S ribosomal protein L35 [Dichelobacter nodosus VCS1703A]
 gi|146233250|gb|ABQ14228.1| 50S ribosomal protein L35 [Dichelobacter nodosus VCS1703A]
          Length = 79

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T  G  +   +  RH + K++ K  R+ RG M + ++D K V 
Sbjct: 18 MPKMKTHRGAAKRFKKTKNG-YKVGHSHVRHILTKKTTKRKRHLRGLMQVHASDVKAVK 75


>gi|145589016|ref|YP_001155613.1| ribosomal protein L35 [Polynucleobacter necessarius subsp.
          asymbioticus QLW-P1DMWA-1]
 gi|189042778|sp|A4SX35|RL35_POLSQ RecName: Full=50S ribosomal protein L35
 gi|145047422|gb|ABP34049.1| LSU ribosomal protein L35P [Polynucleobacter necessarius subsp.
          asymbioticus QLW-P1DMWA-1]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+KKRF++ A G ++   A KRH + K++ K  R+ RG+  +A AD K + R
Sbjct: 1  MPKMKSKSSAKKRFTVRAGGTIKRGQAFKRHILTKKTTKNKRHLRGSTEVAKADVKSI-R 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 SMLPY 64


>gi|332878707|ref|ZP_08446424.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
 gi|332683344|gb|EGJ56224.1| ribosomal protein L35 [Capnocytophaga sp. oral taxon 329 str.
          F0087]
          Length = 65

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S +KKRF +T +GK++ + A K H + K++ K         ++ + D   V +
Sbjct: 1  MPKIKTKSGAKKRFKLTGSGKIKRKHAFKSHILTKKAKKRKLALTHATLVHTNDEASVKK 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|448403|prf||1917188D ribosomal protein L35
          Length = 69

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+GK + + A  RH + K++    R+ R  ++++  D  KV +
Sbjct: 5  MPKIKTLRSAAKRFKKTASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSKGDISKV-K 63

Query: 61 NYLPN 65
          ++LP 
Sbjct: 64 SFLPY 68


>gi|296112356|ref|YP_003626294.1| 50S ribosomal protein L35 [Moraxella catarrhalis RH4]
 gi|295920050|gb|ADG60401.1| 50S ribosomal protein L35 [Moraxella catarrhalis RH4]
 gi|326561864|gb|EGE12199.1| 50S ribosomal protein L35 [Moraxella catarrhalis 7169]
 gi|326563299|gb|EGE13566.1| 50S ribosomal protein L35 [Moraxella catarrhalis 46P47B1]
 gi|326563414|gb|EGE13679.1| 50S ribosomal protein L35 [Moraxella catarrhalis 12P80B1]
 gi|326565953|gb|EGE16114.1| 50S ribosomal protein L35 [Moraxella catarrhalis 103P14B1]
 gi|326568912|gb|EGE18981.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC1]
 gi|326569213|gb|EGE19274.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC7]
 gi|326571886|gb|EGE21891.1| 50S ribosomal protein L35 [Moraxella catarrhalis BC8]
 gi|326575398|gb|EGE25323.1| 50S ribosomal protein L35 [Moraxella catarrhalis 101P30B1]
 gi|326576515|gb|EGE26423.1| 50S ribosomal protein L35 [Moraxella catarrhalis CO72]
 gi|326577984|gb|EGE27848.1| 50S ribosomal protein L35 [Moraxella catarrhalis O35E]
          Length = 63

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT   + KRF  TA G  + + A KRH + K+S K IR  RG +++ ++D   + R
Sbjct: 2  KLKTKRGAAKRFKKTANG-FKRKQAFKRHILTKKSPKRIRQLRGCVMVHASDVASIRR 58


>gi|253582913|ref|ZP_04860131.1| ribosomal protein L35 [Fusobacterium varium ATCC 27725]
 gi|257468673|ref|ZP_05632767.1| 50S ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
 gi|317062928|ref|ZP_07927413.1| LSU ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
 gi|251835119|gb|EES63662.1| ribosomal protein L35 [Fusobacterium varium ATCC 27725]
 gi|313688604|gb|EFS25439.1| LSU ribosomal protein L35P [Fusobacterium ulcerans ATCC 49185]
          Length = 68

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +  +V+     KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFIVKHSGKSHILTKKDRKRKNSLKKDLVVTDT-LKKHMQ 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 GLLPYGV 66


>gi|146293112|ref|YP_001183536.1| 50S ribosomal protein L35 [Shewanella putrefaciens CN-32]
 gi|166199836|sp|A4Y704|RL35_SHEPC RecName: Full=50S ribosomal protein L35
 gi|145564802|gb|ABP75737.1| LSU ribosomal protein L35P [Shewanella putrefaciens CN-32]
 gi|319426375|gb|ADV54449.1| ribosomal protein L35 [Shewanella putrefaciens 200]
          Length = 64

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVSKADVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|15802129|ref|NP_288151.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 EDL933]
 gi|16760560|ref|NP_456177.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. CT18]
 gi|16764686|ref|NP_460301.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|29141679|ref|NP_805021.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. Ty2]
 gi|30063016|ref|NP_837187.1| 50S ribosomal protein L35 [Shigella flexneri 2a str. 2457T]
 gi|49176137|ref|NP_416232.3| 50S ribosomal subunit protein L35 [Escherichia coli str. K-12
          substr. MG1655]
 gi|56413678|ref|YP_150753.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. ATCC 9150]
 gi|56479920|ref|NP_707397.2| 50S ribosomal protein L35 [Shigella flexneri 2a str. 301]
 gi|74311963|ref|YP_310382.1| 50S ribosomal protein L35 [Shigella sonnei Ss046]
 gi|82543881|ref|YP_407828.1| 50S ribosomal protein L35 [Shigella boydii Sb227]
 gi|82777065|ref|YP_403414.1| 50S ribosomal protein L35 [Shigella dysenteriae Sd197]
 gi|89108557|ref|AP_002337.1| 50S ribosomal subunit protein L35 [Escherichia coli str. K-12
          substr. W3110]
 gi|91210931|ref|YP_540917.1| 50S ribosomal protein L35 [Escherichia coli UTI89]
 gi|110641838|ref|YP_669568.1| 50S ribosomal protein L35 [Escherichia coli 536]
 gi|156934289|ref|YP_001438204.1| 50S ribosomal protein L35 [Cronobacter sakazakii ATCC BAA-894]
 gi|157161179|ref|YP_001458497.1| 50S ribosomal protein L35 [Escherichia coli HS]
 gi|161503557|ref|YP_001570668.1| 50S ribosomal protein L35 [Salmonella enterica subsp. arizonae
          serovar 62:z4,z23:-- str. RSK2980]
 gi|161614258|ref|YP_001588223.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Paratyphi B str. SPB7]
 gi|162139592|ref|YP_216341.2| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
 gi|162139715|ref|NP_310451.3| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. Sakai]
 gi|168263845|ref|ZP_02685818.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Hadar str. RI_05P066]
 gi|168463265|ref|ZP_02697196.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Newport str. SL317]
 gi|168749466|ref|ZP_02774488.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4113]
 gi|168756718|ref|ZP_02781725.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4401]
 gi|168762219|ref|ZP_02787226.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4501]
 gi|168770478|ref|ZP_02795485.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4486]
 gi|168774982|ref|ZP_02799989.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4196]
 gi|168782132|ref|ZP_02807139.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4076]
 gi|168788113|ref|ZP_02813120.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC869]
 gi|168800102|ref|ZP_02825109.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC508]
 gi|170019934|ref|YP_001724888.1| 50S ribosomal protein L35 [Escherichia coli ATCC 8739]
 gi|170081376|ref|YP_001730696.1| 50S ribosomal subunit protein L35 [Escherichia coli str. K-12
          substr. DH10B]
 gi|170683894|ref|YP_001743532.1| 50S ribosomal protein L35 [Escherichia coli SMS-3-5]
 gi|170768901|ref|ZP_02903354.1| ribosomal protein L35 [Escherichia albertii TW07627]
 gi|187733186|ref|YP_001880507.1| 50S ribosomal protein L35 [Shigella boydii CDC 3083-94]
 gi|188493322|ref|ZP_03000592.1| ribosomal protein L35 [Escherichia coli 53638]
 gi|191167866|ref|ZP_03029671.1| ribosomal protein L35 [Escherichia coli B7A]
 gi|191171638|ref|ZP_03033185.1| ribosomal protein L35 [Escherichia coli F11]
 gi|193068954|ref|ZP_03049913.1| ribosomal protein L35 [Escherichia coli E110019]
 gi|194428536|ref|ZP_03061075.1| ribosomal protein L35 [Escherichia coli B171]
 gi|194435146|ref|ZP_03067380.1| ribosomal protein L35 [Shigella dysenteriae 1012]
 gi|194438501|ref|ZP_03070590.1| ribosomal protein L35 [Escherichia coli 101-1]
 gi|194442458|ref|YP_002040592.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Newport str. SL254]
 gi|194451541|ref|YP_002045342.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL476]
 gi|194470850|ref|ZP_03076834.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Kentucky str. CVM29188]
 gi|194735783|ref|YP_002114352.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. CVM19633]
 gi|195937401|ref|ZP_03082783.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. EC4024]
 gi|197250002|ref|YP_002146702.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Agona str. SL483]
 gi|197262832|ref|ZP_03162906.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA23]
 gi|198245510|ref|YP_002215791.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
 gi|200390425|ref|ZP_03217036.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Virchow str. SL491]
 gi|204927573|ref|ZP_03218774.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205352942|ref|YP_002226743.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 287/91]
 gi|206576444|ref|YP_002237976.1| ribosomal protein L35 [Klebsiella pneumoniae 342]
 gi|207857158|ref|YP_002243809.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Enteritidis str. P125109]
 gi|208810204|ref|ZP_03252080.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4206]
 gi|208816724|ref|ZP_03257844.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4045]
 gi|208821868|ref|ZP_03262188.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4042]
 gi|209397787|ref|YP_002270787.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4115]
 gi|209919076|ref|YP_002293160.1| 50S ribosomal protein L35 [Escherichia coli SE11]
 gi|213161899|ref|ZP_03347609.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. E00-7866]
 gi|213650867|ref|ZP_03380920.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
 gi|213852222|ref|ZP_03381754.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. M223]
 gi|217329004|ref|ZP_03445085.1| ribosomal protein L35 [Escherichia coli O157:H7 str. TW14588]
 gi|218548711|ref|YP_002382502.1| 50S ribosomal protein L35 [Escherichia fergusonii ATCC 35469]
 gi|218554285|ref|YP_002387198.1| 50S ribosomal protein L35 [Escherichia coli IAI1]
 gi|218558587|ref|YP_002391500.1| 50S ribosomal protein L35 [Escherichia coli S88]
 gi|218689662|ref|YP_002397874.1| 50S ribosomal protein L35 [Escherichia coli ED1a]
 gi|218695279|ref|YP_002402946.1| 50S ribosomal protein L35 [Escherichia coli 55989]
 gi|218699715|ref|YP_002407344.1| 50S ribosomal protein L35 [Escherichia coli IAI39]
 gi|218705217|ref|YP_002412736.1| 50S ribosomal protein L35 [Escherichia coli UMN026]
 gi|227885861|ref|ZP_04003666.1| 50S ribosomal protein L35 [Escherichia coli 83972]
 gi|238900932|ref|YP_002926728.1| 50S ribosomal subunit protein L35 [Escherichia coli BW2952]
 gi|238910849|ref|ZP_04654686.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Tennessee str. CDC07-0191]
 gi|253773328|ref|YP_003036159.1| 50S ribosomal protein L35 [Escherichia coli 'BL21-Gold(DE3)pLysS
          AG']
 gi|254161777|ref|YP_003044885.1| 50S ribosomal protein L35 [Escherichia coli B str. REL606]
 gi|254793334|ref|YP_003078171.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. TW14359]
 gi|256018090|ref|ZP_05431955.1| 50S ribosomal protein L35 [Shigella sp. D9]
 gi|256022619|ref|ZP_05436484.1| 50S ribosomal protein L35 [Escherichia sp. 4_1_40B]
 gi|260597639|ref|YP_003210210.1| 50S ribosomal protein L35 [Cronobacter turicensis z3032]
 gi|260844069|ref|YP_003221847.1| 50S ribosomal subunit protein L35 [Escherichia coli O103:H2 str.
          12009]
 gi|260855583|ref|YP_003229474.1| 50S ribosomal subunit protein L35 [Escherichia coli O26:H11 str.
          11368]
 gi|260868244|ref|YP_003234646.1| 50S ribosomal subunit protein L35 [Escherichia coli O111:H- str.
          11128]
 gi|261227791|ref|ZP_05942072.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str.
          FRIK2000]
 gi|261258044|ref|ZP_05950577.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. FRIK966]
 gi|283833389|ref|ZP_06353130.1| ribosomal protein L35 [Citrobacter youngae ATCC 29220]
 gi|288934886|ref|YP_003438945.1| ribosomal protein L35 [Klebsiella variicola At-22]
 gi|289826212|ref|ZP_06545324.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139]
 gi|291282897|ref|YP_003499715.1| 50S ribosomal protein L35 [Escherichia coli O55:H7 str. CB9615]
 gi|293405216|ref|ZP_06649208.1| rpmI [Escherichia coli FVEC1412]
 gi|293410033|ref|ZP_06653609.1| 50S ribosomal protein L35 [Escherichia coli B354]
 gi|293415035|ref|ZP_06657678.1| 50S ribosomal protein L35 [Escherichia coli B185]
 gi|293446091|ref|ZP_06662513.1| 50S ribosomal protein L35 [Escherichia coli B088]
 gi|296102764|ref|YP_003612910.1| 50S ribosomal protein L35 [Enterobacter cloacae subsp. cloacae
          ATCC 13047]
 gi|297518984|ref|ZP_06937370.1| 50S ribosomal protein L35 [Escherichia coli OP50]
 gi|298380859|ref|ZP_06990458.1| rpmI [Escherichia coli FVEC1302]
 gi|300818356|ref|ZP_07098566.1| ribosomal protein L35 [Escherichia coli MS 107-1]
 gi|300821409|ref|ZP_07101556.1| ribosomal protein L35 [Escherichia coli MS 119-7]
 gi|300898495|ref|ZP_07116832.1| ribosomal protein L35 [Escherichia coli MS 198-1]
 gi|300904573|ref|ZP_07122410.1| ribosomal protein L35 [Escherichia coli MS 84-1]
 gi|300917721|ref|ZP_07134370.1| ribosomal protein L35 [Escherichia coli MS 115-1]
 gi|300924759|ref|ZP_07140701.1| ribosomal protein L35 [Escherichia coli MS 182-1]
 gi|300930807|ref|ZP_07146179.1| ribosomal protein L35 [Escherichia coli MS 187-1]
 gi|300938949|ref|ZP_07153650.1| ribosomal protein L35 [Escherichia coli MS 21-1]
 gi|300951317|ref|ZP_07165161.1| ribosomal protein L35 [Escherichia coli MS 116-1]
 gi|300958606|ref|ZP_07170731.1| ribosomal protein L35 [Escherichia coli MS 175-1]
 gi|300987616|ref|ZP_07178288.1| ribosomal protein L35 [Escherichia coli MS 200-1]
 gi|300994420|ref|ZP_07180925.1| ribosomal protein L35 [Escherichia coli MS 45-1]
 gi|301017726|ref|ZP_07182381.1| ribosomal protein L35 [Escherichia coli MS 69-1]
 gi|301025268|ref|ZP_07188833.1| ribosomal protein L35 [Escherichia coli MS 196-1]
 gi|301050946|ref|ZP_07197795.1| ribosomal protein L35 [Escherichia coli MS 185-1]
 gi|301303995|ref|ZP_07210113.1| ribosomal protein L35 [Escherichia coli MS 124-1]
 gi|301327447|ref|ZP_07220682.1| ribosomal protein L35 [Escherichia coli MS 78-1]
 gi|301647908|ref|ZP_07247685.1| ribosomal protein L35 [Escherichia coli MS 146-1]
 gi|306815030|ref|ZP_07449186.1| 50S ribosomal protein L35 [Escherichia coli NC101]
 gi|307138376|ref|ZP_07497732.1| 50S ribosomal protein L35 [Escherichia coli H736]
 gi|307310713|ref|ZP_07590359.1| ribosomal protein L35 [Escherichia coli W]
 gi|309788455|ref|ZP_07683059.1| ribosomal protein L35 [Shigella dysenteriae 1617]
 gi|309793487|ref|ZP_07687914.1| ribosomal protein L35 [Escherichia coli MS 145-7]
 gi|311279398|ref|YP_003941629.1| ribosomal protein L35 [Enterobacter cloacae SCF1]
 gi|312966919|ref|ZP_07781137.1| ribosomal protein L35 [Escherichia coli 2362-75]
 gi|330009684|ref|ZP_08306558.1| ribosomal protein L35 [Klebsiella sp. MS 92-3]
 gi|331663196|ref|ZP_08364106.1| ribosomal protein L35 [Escherichia coli TA143]
 gi|331668402|ref|ZP_08369250.1| ribosomal protein L35 [Escherichia coli TA271]
 gi|331683223|ref|ZP_08383824.1| ribosomal protein L35 [Escherichia coli H299]
 gi|67472340|sp|P0A7Q1|RL35_ECOLI RecName: Full=50S ribosomal protein L35; AltName: Full=Ribosomal
          protein A
 gi|67472341|sp|P0A7Q2|RL35_ECO57 RecName: Full=50S ribosomal protein L35
 gi|67472342|sp|P0A7Q3|RL35_SALTY RecName: Full=50S ribosomal protein L35
 gi|67472343|sp|P0A7Q4|RL35_SALTI RecName: Full=50S ribosomal protein L35
 gi|67472346|sp|P0A7Q5|RL35_SHIFL RecName: Full=50S ribosomal protein L35
 gi|81677885|sp|Q5PH90|RL35_SALPA RecName: Full=50S ribosomal protein L35
 gi|118573007|sp|Q0THB2|RL35_ECOL5 RecName: Full=50S ribosomal protein L35
 gi|118573021|sp|Q57PV1|RL35_SALCH RecName: Full=50S ribosomal protein L35
 gi|126352248|sp|Q3Z265|RL35_SHISS RecName: Full=50S ribosomal protein L35
 gi|148840423|sp|Q1RB78|RL35_ECOUT RecName: Full=50S ribosomal protein L35
 gi|148887108|sp|Q321K8|RL35_SHIBS RecName: Full=50S ribosomal protein L35
 gi|148887109|sp|Q32FI2|RL35_SHIDS RecName: Full=50S ribosomal protein L35
 gi|166231183|sp|A7MNZ2|RL35_ENTS8 RecName: Full=50S ribosomal protein L35
 gi|166988033|sp|A8A0R0|RL35_ECOHS RecName: Full=50S ribosomal protein L35
 gi|189042768|sp|B1IPL1|RL35_ECOLC RecName: Full=50S ribosomal protein L35
 gi|189042783|sp|A9MFC1|RL35_SALAR RecName: Full=50S ribosomal protein L35
 gi|189042784|sp|A9N241|RL35_SALPB RecName: Full=50S ribosomal protein L35
 gi|226725000|sp|B7MAS7|RL35_ECO45 RecName: Full=50S ribosomal protein L35
 gi|226725001|sp|B5YQ05|RL35_ECO5E RecName: Full=50S ribosomal protein L35
 gi|226725002|sp|B7NT60|RL35_ECO7I RecName: Full=50S ribosomal protein L35
 gi|226725003|sp|B7M1C5|RL35_ECO8A RecName: Full=50S ribosomal protein L35
 gi|226725004|sp|B1XG24|RL35_ECODH RecName: Full=50S ribosomal protein L35
 gi|226725005|sp|B7N554|RL35_ECOLU RecName: Full=50S ribosomal protein L35
 gi|226725006|sp|B6IBD5|RL35_ECOSE RecName: Full=50S ribosomal protein L35
 gi|226725007|sp|B1LE14|RL35_ECOSM RecName: Full=50S ribosomal protein L35
 gi|226725010|sp|B7LQ73|RL35_ESCF3 RecName: Full=50S ribosomal protein L35
 gi|226725021|sp|B5XQC8|RL35_KLEP3 RecName: Full=50S ribosomal protein L35
 gi|226725058|sp|B5F7G0|RL35_SALA4 RecName: Full=50S ribosomal protein L35
 gi|226725059|sp|B5FJA6|RL35_SALDC RecName: Full=50S ribosomal protein L35
 gi|226725060|sp|B5QVW6|RL35_SALEP RecName: Full=50S ribosomal protein L35
 gi|226725061|sp|B5RAX1|RL35_SALG2 RecName: Full=50S ribosomal protein L35
 gi|226725062|sp|B4TGH3|RL35_SALHS RecName: Full=50S ribosomal protein L35
 gi|226725063|sp|B4T4N0|RL35_SALNS RecName: Full=50S ribosomal protein L35
 gi|226725064|sp|B4TUF2|RL35_SALSV RecName: Full=50S ribosomal protein L35
 gi|226725066|sp|B2U395|RL35_SHIB3 RecName: Full=50S ribosomal protein L35
 gi|254802451|sp|B7L6J0|RL35_ECO55 RecName: Full=50S ribosomal protein L35
 gi|254802452|sp|B7MVJ5|RL35_ECO81 RecName: Full=50S ribosomal protein L35
 gi|259647352|sp|C4ZYH9|RL35_ECOBW RecName: Full=50S ribosomal protein L35
 gi|25295670|pir||AI0705 50S ribosomal chain protein L35 [imported] - Salmonella enterica
          subsp. enterica serovar Typhi (strain CT18)
 gi|116666598|pdb|1VS6|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With The Antibiotic
          Kasugamyin At 3.5a Resolution. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|116666650|pdb|1VS8|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With The Antibiotic
          Kasugamyin At 3.5a Resolution. This File Contains The
          30s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|257097371|pdb|3I1N|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|257097423|pdb|3I1P|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|257097477|pdb|3I1R|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|257097531|pdb|3I1T|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|257097586|pdb|3I20|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|257097641|pdb|3I22|3 Chain 3, Crystal Structure Of The E. Coli 70s Ribosome In An
          Intermediate State Of Ratcheting
 gi|290560361|pdb|3KCR|3 Chain 3, Ribosome-Secy Complex. This Entry 3kcr Contains 50s
          Ribosomal Subnit. The 30s Ribosomal Subunit Can Be
          Found In Pdb Entry 3kc4
 gi|308198384|pdb|1VT2|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Cem-101. This File Contains The 50s Subunit Of The
          Second 70s Ribosome.
 gi|308198758|pdb|3ORB|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Cem-101. This File Contains The 50s Subunit Of The
          First 70s Ribosome Bound To Cem-101.
 gi|326634240|pdb|3IZT|FF Chain f, Structural Insights Into Cognate Vs. Near-Cognate
          Discrimination During Decoding. This Entry Contains The
          Large Subunit Of A Ribosome Programmed With A
          Near-Cognate Codon.
 gi|326634273|pdb|3IZU|FF Chain f, Structural Insights Into Cognate Vs. Near-Cognate
          Discrimination During Decoding. This Entry Contains The
          Large Subunit Of A Ribosome Programmed With A Cognate
          Codon
 gi|12515728|gb|AAG56704.1|AE005394_13 50S ribosomal subunit protein A [Escherichia coli O157:H7 str.
          EDL933]
 gi|1742796|dbj|BAA15484.1| 50S ribosomal subunit protein L35 [Escherichia coli str. K12
          substr. W3110]
 gi|1788010|gb|AAC74787.1| 50S ribosomal subunit protein L35 [Escherichia coli str. K-12
          substr. MG1655]
 gi|13361891|dbj|BAB35847.1| 50S ribosomal subunit protein A [Escherichia coli O157:H7 str.
          Sakai]
 gi|16419854|gb|AAL20260.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|16502856|emb|CAD02018.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Typhi]
 gi|29137307|gb|AAO68870.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|30041265|gb|AAP16994.1| 50S ribosomal subunit protein A [Shigella flexneri 2a str. 2457T]
 gi|56127935|gb|AAV77441.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|56383471|gb|AAN43104.2| 50S ribosomal subunit protein A [Shigella flexneri 2a str. 301]
 gi|73855440|gb|AAZ88147.1| 50S ribosomal subunit protein A [Shigella sonnei Ss046]
 gi|81241213|gb|ABB61923.1| 50S ribosomal subunit protein A [Shigella dysenteriae Sd197]
 gi|81245292|gb|ABB66000.1| 50S ribosomal subunit protein A [Shigella boydii Sb227]
 gi|91072505|gb|ABE07386.1| 50S ribosomal subunit protein A [Escherichia coli UTI89]
 gi|110343430|gb|ABG69667.1| 50S ribosomal protein L35 [Escherichia coli 536]
 gi|156532543|gb|ABU77369.1| hypothetical protein ESA_02120 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|157066859|gb|ABV06114.1| ribosomal protein L35 [Escherichia coli HS]
 gi|160864904|gb|ABX21527.1| hypothetical protein SARI_01635 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
 gi|161363622|gb|ABX67390.1| hypothetical protein SPAB_02003 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|169754862|gb|ACA77561.1| ribosomal protein L35 [Escherichia coli ATCC 8739]
 gi|169889211|gb|ACB02918.1| 50S ribosomal subunit protein L35 [Escherichia coli str. K-12
          substr. DH10B]
 gi|170122449|gb|EDS91380.1| ribosomal protein L35 [Escherichia albertii TW07627]
 gi|170521612|gb|ACB19790.1| ribosomal protein L35 [Escherichia coli SMS-3-5]
 gi|187430178|gb|ACD09452.1| ribosomal protein L35 [Shigella boydii CDC 3083-94]
 gi|187769506|gb|EDU33350.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4196]
 gi|188016258|gb|EDU54380.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4113]
 gi|188488521|gb|EDU63624.1| ribosomal protein L35 [Escherichia coli 53638]
 gi|189000336|gb|EDU69322.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4076]
 gi|189356165|gb|EDU74584.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4401]
 gi|189360630|gb|EDU79049.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4486]
 gi|189367430|gb|EDU85846.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4501]
 gi|189372008|gb|EDU90424.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC869]
 gi|189377547|gb|EDU95963.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC508]
 gi|190902125|gb|EDV61869.1| ribosomal protein L35 [Escherichia coli B7A]
 gi|190907968|gb|EDV67560.1| ribosomal protein L35 [Escherichia coli F11]
 gi|192957749|gb|EDV88193.1| ribosomal protein L35 [Escherichia coli E110019]
 gi|194401121|gb|ACF61343.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Newport str. SL254]
 gi|194409845|gb|ACF70064.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL476]
 gi|194413414|gb|EDX29697.1| ribosomal protein L35 [Escherichia coli B171]
 gi|194416610|gb|EDX32745.1| ribosomal protein L35 [Shigella dysenteriae 1012]
 gi|194422511|gb|EDX38509.1| ribosomal protein L35 [Escherichia coli 101-1]
 gi|194457214|gb|EDX46053.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Kentucky str. CVM29188]
 gi|194711285|gb|ACF90506.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. CVM19633]
 gi|195182907|dbj|BAG66477.1| 50S ribosomal subunit protein A [Escherichia coli O111:H-]
 gi|195634319|gb|EDX52671.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Newport str. SL317]
 gi|197213705|gb|ACH51102.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Agona str. SL483]
 gi|197241087|gb|EDY23707.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA23]
 gi|197940026|gb|ACH77359.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
 gi|199602870|gb|EDZ01416.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Virchow str. SL491]
 gi|204322915|gb|EDZ08111.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205272723|emb|CAR37639.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|205347530|gb|EDZ34161.1| ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Hadar str. RI_05P066]
 gi|206565502|gb|ACI07278.1| ribosomal protein L35 [Klebsiella pneumoniae 342]
 gi|206708961|emb|CAR33291.1| 50S ribosomal subunit protein L35 [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|208724720|gb|EDZ74427.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4206]
 gi|208731067|gb|EDZ79756.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4045]
 gi|208741991|gb|EDZ89673.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4042]
 gi|209159187|gb|ACI36620.1| ribosomal protein L35 [Escherichia coli O157:H7 str. EC4115]
 gi|209768848|gb|ACI82736.1| 50S ribosomal subunit protein A [Escherichia coli]
 gi|209768850|gb|ACI82737.1| 50S ribosomal subunit protein A [Escherichia coli]
 gi|209768852|gb|ACI82738.1| 50S ribosomal subunit protein A [Escherichia coli]
 gi|209768854|gb|ACI82739.1| 50S ribosomal subunit protein A [Escherichia coli]
 gi|209768856|gb|ACI82740.1| 50S ribosomal subunit protein A [Escherichia coli]
 gi|209912335|dbj|BAG77409.1| 50S ribosomal protein L35 [Escherichia coli SE11]
 gi|217318351|gb|EEC26778.1| ribosomal protein L35 [Escherichia coli O157:H7 str. TW14588]
 gi|218352011|emb|CAU97743.1| 50S ribosomal subunit protein L35 [Escherichia coli 55989]
 gi|218356252|emb|CAQ88870.1| 50S ribosomal subunit protein L35 [Escherichia fergusonii ATCC
          35469]
 gi|218361053|emb|CAQ98629.1| 50S ribosomal subunit protein L35 [Escherichia coli IAI1]
 gi|218365356|emb|CAR03076.1| 50S ribosomal subunit protein L35 [Escherichia coli S88]
 gi|218369701|emb|CAR17471.1| 50S ribosomal subunit protein L35 [Escherichia coli IAI39]
 gi|218427226|emb|CAR08111.2| 50S ribosomal subunit protein L35 [Escherichia coli ED1a]
 gi|218432314|emb|CAR13203.1| 50S ribosomal subunit protein L35 [Escherichia coli UMN026]
 gi|222033472|emb|CAP76213.1| 50S ribosomal protein L35 [Escherichia coli LF82]
 gi|227837434|gb|EEJ47900.1| 50S ribosomal protein L35 [Escherichia coli 83972]
 gi|238859874|gb|ACR61872.1| 50S ribosomal subunit protein L35 [Escherichia coli BW2952]
 gi|242377440|emb|CAQ32192.1| 50S ribosomal subunit protein L35, subunit of 50S ribosomal
          subunit and ribosome [Escherichia coli BL21(DE3)]
 gi|253324372|gb|ACT28974.1| ribosomal protein L35 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973678|gb|ACT39349.1| 50S ribosomal protein L35 [Escherichia coli B str. REL606]
 gi|253977872|gb|ACT43542.1| 50S ribosomal protein L35 [Escherichia coli BL21(DE3)]
 gi|254592734|gb|ACT72095.1| 50S ribosomal subunit protein L35 [Escherichia coli O157:H7 str.
          TW14359]
 gi|257754232|dbj|BAI25734.1| 50S ribosomal subunit protein L35 [Escherichia coli O26:H11 str.
          11368]
 gi|257759216|dbj|BAI30713.1| 50S ribosomal subunit protein L35 [Escherichia coli O103:H2 str.
          12009]
 gi|257764600|dbj|BAI36095.1| 50S ribosomal subunit protein L35 [Escherichia coli O111:H- str.
          11128]
 gi|260216816|emb|CBA30300.1| 50S ribosomal protein L35 [Cronobacter turicensis z3032]
 gi|260449160|gb|ACX39582.1| ribosomal protein L35 [Escherichia coli DH1]
 gi|261246544|emb|CBG24354.1| 50S ribosomal protein L35. Chloroplast 50S ribosomal protein L35
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. D23580]
 gi|267993215|gb|ACY88100.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 14028S]
 gi|281178787|dbj|BAI55117.1| 50S ribosomal protein L35 [Escherichia coli SE15]
 gi|284921637|emb|CBG34709.1| 50S ribosomal subunit protein L35 [Escherichia coli 042]
 gi|288889595|gb|ADC57913.1| ribosomal protein L35 [Klebsiella variicola At-22]
 gi|290762770|gb|ADD56731.1| 50S ribosomal protein L35 [Escherichia coli O55:H7 str. CB9615]
 gi|291071039|gb|EFE09148.1| ribosomal protein L35 [Citrobacter youngae ATCC 29220]
 gi|291322921|gb|EFE62349.1| 50S ribosomal protein L35 [Escherichia coli B088]
 gi|291427424|gb|EFF00451.1| rpmI [Escherichia coli FVEC1412]
 gi|291432683|gb|EFF05662.1| 50S ribosomal protein L35 [Escherichia coli B185]
 gi|291470501|gb|EFF12985.1| 50S ribosomal protein L35 [Escherichia coli B354]
 gi|294493953|gb|ADE92709.1| ribosomal protein L35 [Escherichia coli IHE3034]
 gi|295057223|gb|ADF61961.1| 50S ribosomal protein L35 [Enterobacter cloacae subsp. cloacae
          ATCC 13047]
 gi|298278301|gb|EFI19815.1| rpmI [Escherichia coli FVEC1302]
 gi|299880133|gb|EFI88344.1| ribosomal protein L35 [Escherichia coli MS 196-1]
 gi|300297400|gb|EFJ53785.1| ribosomal protein L35 [Escherichia coli MS 185-1]
 gi|300306096|gb|EFJ60616.1| ribosomal protein L35 [Escherichia coli MS 200-1]
 gi|300314731|gb|EFJ64515.1| ribosomal protein L35 [Escherichia coli MS 175-1]
 gi|300357847|gb|EFJ73717.1| ribosomal protein L35 [Escherichia coli MS 198-1]
 gi|300400018|gb|EFJ83556.1| ribosomal protein L35 [Escherichia coli MS 69-1]
 gi|300403486|gb|EFJ87024.1| ribosomal protein L35 [Escherichia coli MS 84-1]
 gi|300406266|gb|EFJ89804.1| ribosomal protein L35 [Escherichia coli MS 45-1]
 gi|300415122|gb|EFJ98432.1| ribosomal protein L35 [Escherichia coli MS 115-1]
 gi|300419047|gb|EFK02358.1| ribosomal protein L35 [Escherichia coli MS 182-1]
 gi|300449414|gb|EFK13034.1| ribosomal protein L35 [Escherichia coli MS 116-1]
 gi|300456148|gb|EFK19641.1| ribosomal protein L35 [Escherichia coli MS 21-1]
 gi|300461365|gb|EFK24858.1| ribosomal protein L35 [Escherichia coli MS 187-1]
 gi|300525912|gb|EFK46981.1| ribosomal protein L35 [Escherichia coli MS 119-7]
 gi|300528996|gb|EFK50058.1| ribosomal protein L35 [Escherichia coli MS 107-1]
 gi|300840792|gb|EFK68552.1| ribosomal protein L35 [Escherichia coli MS 124-1]
 gi|300845959|gb|EFK73719.1| ribosomal protein L35 [Escherichia coli MS 78-1]
 gi|301073965|gb|EFK88771.1| ribosomal protein L35 [Escherichia coli MS 146-1]
 gi|301157872|emb|CBW17366.1| 50S ribosomal protein L35. Chloroplast 50S ribosomal protein L35
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. SL1344]
 gi|305851678|gb|EFM52131.1| 50S ribosomal protein L35 [Escherichia coli NC101]
 gi|306908891|gb|EFN39387.1| ribosomal protein L35 [Escherichia coli W]
 gi|307553738|gb|ADN46513.1| 50S ribosomal subunit protein L35 [Escherichia coli ABU 83972]
 gi|307626796|gb|ADN71100.1| 50S ribosomal protein L35 [Escherichia coli UM146]
 gi|308123074|gb|EFO60336.1| ribosomal protein L35 [Escherichia coli MS 145-7]
 gi|308748593|gb|ADO48345.1| ribosomal protein L35 [Enterobacter cloacae SCF1]
 gi|308923837|gb|EFP69340.1| ribosomal protein L35 [Shigella dysenteriae 1617]
 gi|309701940|emb|CBJ01253.1| 50S ribosomal subunit protein L35 [Escherichia coli ETEC H10407]
 gi|312288383|gb|EFR16285.1| ribosomal protein L35 [Escherichia coli 2362-75]
 gi|312912320|dbj|BAJ36294.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. T000240]
 gi|312946318|gb|ADR27145.1| 50S ribosomal protein L35 [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061022|gb|ADT75349.1| 50S ribosomal subunit protein L35 [Escherichia coli W]
 gi|315136357|dbj|BAJ43516.1| 50S ribosomal subunit protein L35 [Escherichia coli DH1]
 gi|315257478|gb|EFU37446.1| ribosomal protein L35 [Escherichia coli MS 85-1]
 gi|315286434|gb|EFU45869.1| ribosomal protein L35 [Escherichia coli MS 110-3]
 gi|315290478|gb|EFU49852.1| ribosomal protein L35 [Escherichia coli MS 153-1]
 gi|315299750|gb|EFU58990.1| ribosomal protein L35 [Escherichia coli MS 16-3]
 gi|315618914|gb|EFU99497.1| ribosomal protein L35 [Escherichia coli 3431]
 gi|320086185|emb|CBY95959.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Weltevreden str. 2007-60-3289-1]
 gi|320173200|gb|EFW48411.1| LSU ribosomal protein L35p [Shigella dysenteriae CDC 74-1112]
 gi|320181255|gb|EFW56174.1| LSU ribosomal protein L35p [Shigella boydii ATCC 9905]
 gi|320185860|gb|EFW60611.1| LSU ribosomal protein L35p [Shigella flexneri CDC 796-83]
 gi|320188404|gb|EFW63066.1| LSU ribosomal protein L35p [Escherichia coli O157:H7 str. EC1212]
 gi|320194572|gb|EFW69203.1| LSU ribosomal protein L35p [Escherichia coli WV_060327]
 gi|320197900|gb|EFW72508.1| LSU ribosomal protein L35p [Escherichia coli EC4100B]
 gi|320641565|gb|EFX10953.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. G5101]
 gi|320646924|gb|EFX15757.1| 50S ribosomal protein L35 [Escherichia coli O157:H- str. 493-89]
 gi|320652206|gb|EFX20504.1| 50S ribosomal protein L35 [Escherichia coli O157:H- str. H 2687]
 gi|320657807|gb|EFX25569.1| 50S ribosomal protein L35 [Escherichia coli O55:H7 str. 3256-97
          TW 07815]
 gi|320658382|gb|EFX26076.1| 50S ribosomal protein L35 [Escherichia coli O55:H7 str. USDA
          5905]
 gi|320668279|gb|EFX35106.1| 50S ribosomal protein L35 [Escherichia coli O157:H7 str. LSU-61]
 gi|321223963|gb|EFX49026.1| LSU ribosomal protein L35p [Salmonella enterica subsp. enterica
          serovar Typhimurium str. TN061786]
 gi|322616720|gb|EFY13629.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315996572]
 gi|322620021|gb|EFY16894.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-1]
 gi|322622331|gb|EFY19176.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-3]
 gi|322627855|gb|EFY24645.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-4]
 gi|322633047|gb|EFY29790.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 515920-1]
 gi|322636707|gb|EFY33410.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 515920-2]
 gi|322641267|gb|EFY37908.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 531954]
 gi|322645256|gb|EFY41785.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. NC_MB110209-0054]
 gi|322650197|gb|EFY46611.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. OH_2009072675]
 gi|322655771|gb|EFY52073.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. CASC_09SCPH15965]
 gi|322660097|gb|EFY56336.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 19N]
 gi|322665336|gb|EFY61524.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 81038-01]
 gi|322669594|gb|EFY65742.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. MD_MDA09249507]
 gi|322673520|gb|EFY69622.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 414877]
 gi|322677446|gb|EFY73510.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 366867]
 gi|322679889|gb|EFY75928.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 413180]
 gi|322687361|gb|EFY83333.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 446600]
 gi|323153045|gb|EFZ39314.1| ribosomal protein L35 [Escherichia coli EPECa14]
 gi|323158486|gb|EFZ44502.1| ribosomal protein L35 [Escherichia coli E128010]
 gi|323175215|gb|EFZ60829.1| ribosomal protein L35 [Escherichia coli LT-68]
 gi|323186267|gb|EFZ71619.1| ribosomal protein L35 [Escherichia coli 1357]
 gi|323192479|gb|EFZ77709.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 609458-1]
 gi|323198666|gb|EFZ83767.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 556150-1]
 gi|323204094|gb|EFZ89108.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 609460]
 gi|323208713|gb|EFZ93651.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 507440-20]
 gi|323210226|gb|EFZ95125.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 556152]
 gi|323217689|gb|EGA02404.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB101509-0077]
 gi|323220243|gb|EGA04698.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB102109-0047]
 gi|323223491|gb|EGA07817.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB110209-0055]
 gi|323229491|gb|EGA13614.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB111609-0052]
 gi|323232714|gb|EGA16810.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 2009083312]
 gi|323240247|gb|EGA24291.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 2009085258]
 gi|323242765|gb|EGA26786.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315731156]
 gi|323249081|gb|EGA33000.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2009159199]
 gi|323254418|gb|EGA38235.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008282]
 gi|323255602|gb|EGA39358.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008283]
 gi|323260121|gb|EGA43746.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008284]
 gi|323267115|gb|EGA50600.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008285]
 gi|323271561|gb|EGA54982.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008287]
 gi|323378407|gb|ADX50675.1| ribosomal protein L35 [Escherichia coli KO11]
 gi|323937319|gb|EGB33598.1| ribosomal protein L35 [Escherichia coli E1520]
 gi|323940617|gb|EGB36808.1| ribosomal protein L35 [Escherichia coli E482]
 gi|323952224|gb|EGB48097.1| ribosomal protein L35 [Escherichia coli H252]
 gi|323956618|gb|EGB52356.1| ribosomal protein L35 [Escherichia coli H263]
 gi|323962100|gb|EGB57696.1| ribosomal protein L35 [Escherichia coli H489]
 gi|323968486|gb|EGB63892.1| ribosomal protein L35 [Escherichia coli M863]
 gi|323978100|gb|EGB73186.1| ribosomal protein L35 [Escherichia coli TW10509]
 gi|324007094|gb|EGB76313.1| ribosomal protein L35 [Escherichia coli MS 57-2]
 gi|324011503|gb|EGB80722.1| ribosomal protein L35 [Escherichia coli MS 60-1]
 gi|324016470|gb|EGB85689.1| ribosomal protein L35 [Escherichia coli MS 117-3]
 gi|324113468|gb|EGC07443.1| ribosomal protein L35 [Escherichia fergusonii B253]
 gi|324119202|gb|EGC13090.1| ribosomal protein L35 [Escherichia coli E1167]
 gi|326342084|gb|EGD65865.1| LSU ribosomal protein L35p [Escherichia coli O157:H7 str. 1044]
 gi|326343636|gb|EGD67398.1| LSU ribosomal protein L35p [Escherichia coli O157:H7 str. 1125]
 gi|327252833|gb|EGE64487.1| ribosomal protein L35 [Escherichia coli STEC_7v]
 gi|328534772|gb|EGF61328.1| ribosomal protein L35 [Klebsiella sp. MS 92-3]
 gi|330911521|gb|EGH40031.1| LSU ribosomal protein L35p [Escherichia coli AA86]
 gi|331058995|gb|EGI30972.1| ribosomal protein L35 [Escherichia coli TA143]
 gi|331063596|gb|EGI35507.1| ribosomal protein L35 [Escherichia coli TA271]
 gi|331079438|gb|EGI50635.1| ribosomal protein L35 [Escherichia coli H299]
 gi|332096368|gb|EGJ01369.1| ribosomal protein L35 [Shigella boydii 3594-74]
 gi|332343436|gb|AEE56770.1| ribosomal protein RpmI [Escherichia coli UMNK88]
 gi|332758645|gb|EGJ88964.1| ribosomal protein L35 [Shigella flexneri 2747-71]
 gi|332759229|gb|EGJ89538.1| ribosomal protein L35 [Shigella flexneri K-671]
 gi|332988223|gb|AEF07206.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. UK-1]
 gi|333003771|gb|EGK23307.1| ribosomal protein L35 [Shigella flexneri VA-6]
 gi|333006572|gb|EGK26072.1| ribosomal protein L35 [Shigella flexneri K-272]
 gi|333018791|gb|EGK38084.1| ribosomal protein L35 [Shigella flexneri K-227]
          Length = 65

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVI 59


>gi|21674937|ref|NP_663002.1| 50S ribosomal protein L35 [Chlorobium tepidum TLS]
 gi|25091163|sp|Q8KAM8|RL35_CHLTE RecName: Full=50S ribosomal protein L35
 gi|21648166|gb|AAM73344.1| ribosomal protein L35 [Chlorobium tepidum TLS]
          Length = 64

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GKV+ +     H +  ++ K  R    + ++ S   K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKVKRERMNGSHNLEHKNRKRTRRLHQSTLVDSTKEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|297182830|gb|ADI18982.1| hypothetical protein [uncultured delta proteobacterium
          HF0010_10I05]
          Length = 70

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+    KRF +T +GK + + A  RHGM KRSN   R+ R    +  +D + V+   
Sbjct: 5  KMKTHKGGAKRFKMTGSGKFKRKKAYLRHGMRKRSNDAKRSLRQKGYVEGSDHQAVV-AL 63

Query: 63 LPN 65
          LP 
Sbjct: 64 LPY 66


>gi|326792020|ref|YP_004309841.1| ribosomal protein L35 [Clostridium lentocellum DSM 5427]
 gi|326542784|gb|ADZ84643.1| ribosomal protein L35 [Clostridium lentocellum DSM 5427]
          Length = 67

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KTN ++ KRF +T TGK++   A KRH + K+S K  RN R   ++ S + K++ R  
Sbjct: 5  KLKTNRAAAKRFKVTGTGKLKRNKAYKRHILTKKSTKTKRNLRKAGIVDSTNEKQMKRIL 64


>gi|119358271|ref|YP_912915.1| 50S ribosomal protein L35 [Chlorobium phaeobacteroides DSM 266]
 gi|166231174|sp|A1BJB4|RL35_CHLPD RecName: Full=50S ribosomal protein L35
 gi|119355620|gb|ABL66491.1| LSU ribosomal protein L35P [Chlorobium phaeobacteroides DSM 266]
          Length = 64

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R      +L SA  K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKHERMNGSHNLEKKNRKRSRRLHQATILDSAKEKQIRR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|221632834|ref|YP_002522056.1| 50S ribosomal protein L35 [Thermomicrobium roseum DSM 5159]
 gi|254803163|sp|B9KZB4|RL35_THERP RecName: Full=50S ribosomal protein L35
 gi|221157251|gb|ACM06378.1| ribosomal protein L35 [Thermomicrobium roseum DSM 5159]
          Length = 66

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF IT TGKV      + H  +K++ +  R+      +  +D  +V +
Sbjct: 1  MPKMKTKRAAAKRFKITGTGKVMRMRHARNHNRLKKAPRVRRSFDKMAPVHPSDVHRV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 PLLPY 64


>gi|332090642|gb|EGI95737.1| ribosomal protein L35 [Shigella boydii 5216-82]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKSMVSKGDLGLVI 59


>gi|330467001|ref|YP_004404744.1| 50S ribosomal protein L35 [Verrucosispora maris AB-18-032]
 gi|328809972|gb|AEB44144.1| 50S ribosomal protein L35 [Verrucosispora maris AB-18-032]
          Length = 64

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+++ + KR  +T  GK+  Q AG RH + K+ +   R   G +  A +D K++ +
Sbjct: 1  MPKMKSHTGTGKRVRVTGKGKIMKQQAGLRHNLEKKPSTRTRRLTGVVEAAKSDVKRLKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|227505047|ref|ZP_03935096.1| 50S ribosomal protein L35 [Corynebacterium striatum ATCC 6940]
 gi|227198411|gb|EEI78459.1| 50S ribosomal protein L35 [Corynebacterium striatum ATCC 6940]
          Length = 64

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + AG+RH +  + +K  R  +GT  +A +D K+V R  
Sbjct: 2  KQKTHKGTAKRVKVTGSGKLRREQAGRRHLLEGKPSKQTRRLKGTKDVAPSDVKRVKRLL 61


>gi|261250895|ref|ZP_05943469.1| LSU ribosomal protein L35p [Vibrio orientalis CIP 102891]
 gi|323493465|ref|ZP_08098587.1| 50S ribosomal protein L35 [Vibrio brasiliensis LMG 20546]
 gi|260937768|gb|EEX93756.1| LSU ribosomal protein L35p [Vibrio orientalis CIP 102891]
 gi|323312288|gb|EGA65430.1| 50S ribosomal protein L35 [Vibrio brasiliensis LMG 20546]
          Length = 64

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|194333011|ref|YP_002014871.1| 50S ribosomal protein L35 [Prosthecochloris aestuarii DSM 271]
 gi|226725048|sp|B4S3D0|RL35_PROA2 RecName: Full=50S ribosomal protein L35
 gi|194310829|gb|ACF45224.1| ribosomal protein L35 [Prosthecochloris aestuarii DSM 271]
          Length = 64

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GKV+ +     H + K++ K  R    + ++ S   K++ R
Sbjct: 1  MPKMKSHRGACKRFKKTASGKVKRERMYGSHNLEKKNRKRTRRLHQSTLVDSTQEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|312622557|ref|YP_004024170.1| 50S ribosomal protein L35 [Caldicellulosiruptor kronotskyensis
          2002]
 gi|312203024|gb|ADQ46351.1| ribosomal protein L35 [Caldicellulosiruptor kronotskyensis 2002]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+V+ + + K V +
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRRKAGKSHLLSGKSRKRKRNLKKTVVVDATNVKAVKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|149196437|ref|ZP_01873492.1| 50S ribosomal protein L35 [Lentisphaera araneosa HTCC2155]
 gi|149140698|gb|EDM29096.1| 50S ribosomal protein L35 [Lentisphaera araneosa HTCC2155]
          Length = 67

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT     KR   T TGK     AGKRH + K+S K       + VL   +    ++
Sbjct: 1  MPKQKTRKCVAKRLKQTGTGKFIRCRAGKRHILTKKSPKRKARLGTSTVLKDCEL-NAVK 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 AALPYGL 66


>gi|331212023|ref|XP_003307281.1| hypothetical protein PGTG_00231 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309297684|gb|EFP74275.1| hypothetical protein PGTG_00231 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 188

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT+  + KRF +T  G+ +   AG +H M   S    R  +  +++  +    ++R  
Sbjct: 67  KLKTHQGASKRFFVTGRGQFKRVQAGTQHLMTGLSQTRKRKLKPMVIVKRSQTS-LLRKL 125

Query: 63  LPN 65
           LP 
Sbjct: 126 LPY 128


>gi|254302739|ref|ZP_04970097.1| ribosomal protein L35 [Fusobacterium nucleatum subsp. polymorphum
          ATCC 10953]
 gi|148322931|gb|EDK88181.1| ribosomal protein L35 [Fusobacterium nucleatum subsp. polymorphum
          ATCC 10953]
          Length = 68

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+  K   + +   V+     KK ++
Sbjct: 1  MPKMKTHRGAKKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNHLKKDAVVTET-YKKHMQ 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 GLLPYG 65


>gi|21672409|ref|NP_660476.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
 gi|1350728|sp|P49240|RL35_BUCAP RecName: Full=50S ribosomal protein L35
 gi|868029|gb|AAC43607.1| large ribosomal subunit protein L35 [Buchnera aphidicola]
 gi|21623018|gb|AAM67687.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
 gi|1098082|prf||2115235D ribosomal protein L35
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  TA+GK + + A  RH + K++    R+ R  ++++  D  KV +
Sbjct: 1  MPKIKTLRSAAKRFKKTASGKFKRKQANLRHILTKKTTTKKRHLRPKILVSKGDISKV-K 59

Query: 61 NYLPN 65
          ++LP 
Sbjct: 60 SFLPY 64


>gi|255280784|ref|ZP_05345339.1| ribosomal protein L35 [Bryantella formatexigens DSM 14469]
 gi|255268721|gb|EET61926.1| ribosomal protein L35 [Bryantella formatexigens DSM 14469]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKMKTSRAAAKRFKMTGTGKLKRSKAYKSHILTKKSTKRKRNLRKPAITDATNFKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|328949635|ref|YP_004366970.1| 50S ribosomal protein L35 [Marinithermus hydrothermalis DSM
          14884]
 gi|328449959|gb|AEB10860.1| 50S ribosomal protein L35 [Marinithermus hydrothermalis DSM
          14884]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +K R  +TA GKV A   GKRH    +S K IRN      L   DA++V R
Sbjct: 1  MAKMKTHKGAKGRVKVTARGKVVAMKPGKRHLNWHKSGKSIRNKGKKFTLFEGDARRV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 ELLPY 64


>gi|71892132|ref|YP_277864.1| 50S ribosomal protein L35 [Candidatus Blochmannia pennsylvanicus
          str. BPEN]
 gi|148887063|sp|Q492V3|RL35_BLOPB RecName: Full=50S ribosomal protein L35
 gi|71796238|gb|AAZ40989.1| 50S ribosomal subunit protein L35 [Candidatus Blochmannia
          pennsylvanicus str. BPEN]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF ITA GK + + A  RH + K+S K  R+ R   +L       +++
Sbjct: 1  MPKIKTLQAASKRFKITALGKYKYKHANMRHILTKKSTKHKRHLRQKSILPKIYLTTIMK 60

Query: 61 NYLPN 65
           YLP 
Sbjct: 61 -YLPY 64


>gi|288553675|ref|YP_003425610.1| 50S ribosomal protein L35 [Bacillus pseudofirmus OF4]
 gi|288544835|gb|ADC48718.1| 50S ribosomal protein L35 [Bacillus pseudofirmus OF4]
          Length = 66

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++       H    +S K  R  R + ++ S D K++ 
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAHGFTSHLFGNKSQKQKRKLRKSAIVHSGDFKRIR 59


>gi|167758932|ref|ZP_02431059.1| hypothetical protein CLOSCI_01278 [Clostridium scindens ATCC
          35704]
 gi|167663339|gb|EDS07469.1| hypothetical protein CLOSCI_01278 [Clostridium scindens ATCC
          35704]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R  ++  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRKPIITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|94676874|ref|YP_588908.1| ribosomal protein L35 [Baumannia cicadellinicola str. Hc
          (Homalodisca coagulata)]
 gi|118572999|sp|Q1LT06|RL35_BAUCH RecName: Full=50S ribosomal protein L35
 gi|94220024|gb|ABF14183.1| ribosomal protein L35 [Baumannia cicadellinicola str. Hc
          (Homalodisca coagulata)]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+   + KRF   ++G  + + A  RH + K+S    RN R   +++  D   V+R
Sbjct: 1  MPKLKSVRGAVKRFKKNSSGCFKHKQAYLRHLLTKKSTNRKRNLRFKSIVSKGDKNLVVR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|225574525|ref|ZP_03783135.1| hypothetical protein RUMHYD_02602 [Blautia hydrogenotrophica DSM
          10507]
 gi|225038256|gb|EEG48502.1| hypothetical protein RUMHYD_02602 [Blautia hydrogenotrophica DSM
          10507]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TGK+    A K H + K+S K  RN R + V  S + K + +
Sbjct: 1  MPKIKTCRAAAKRFKKTGTGKLVRSKAYKSHILTKKSQKRKRNLRKSTVTDSTNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 AL 62


>gi|242239481|ref|YP_002987662.1| 50S ribosomal protein L35 [Dickeya dadantii Ech703]
 gi|242131538|gb|ACS85840.1| ribosomal protein L35 [Dickeya dadantii Ech703]
          Length = 65

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          MPK+KT   + KRF  TA G  + + A  RH + K++ K  R+ R   +++  D
Sbjct: 1  MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKATKRKRHLRPKAMVSKGD 54


>gi|73748563|ref|YP_307802.1| 50S ribosomal protein L35 [Dehalococcoides sp. CBDB1]
 gi|147669323|ref|YP_001214141.1| 50S ribosomal protein L35 [Dehalococcoides sp. BAV1]
 gi|289432590|ref|YP_003462463.1| ribosomal protein L35 [Dehalococcoides sp. GT]
 gi|148840421|sp|Q3ZXB7|RL35_DEHSC RecName: Full=50S ribosomal protein L35
 gi|189042766|sp|A5FRB1|RL35_DEHSB RecName: Full=50S ribosomal protein L35
 gi|73660279|emb|CAI82886.1| ribosomal protein L35 [Dehalococcoides sp. CBDB1]
 gi|146270271|gb|ABQ17263.1| LSU ribosomal protein L35P [Dehalococcoides sp. BAV1]
 gi|288946310|gb|ADC74007.1| ribosomal protein L35 [Dehalococcoides sp. GT]
          Length = 67

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK+      K H    +S + +R       +A  D  ++ +
Sbjct: 1  MPKMKTRKTAAKRFHVTGTGKIMRSKGMKSHLRRNKSARVLRQFDEMSQVAGVDRARIQK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LIPYGV 66


>gi|90417313|ref|ZP_01225239.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2207]
 gi|90330898|gb|EAS46161.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2207]
          Length = 64

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+S + KRF  TA+G  + +   K H + K + K  R  RGT +L +AD  +V R
Sbjct: 1  MPKGKTHSGAAKRFKKTASG-YKHKHQHKSHILTKMTTKRKRQLRGTSILNAADKPRVDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|326336126|ref|ZP_08202298.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Capnocytophaga
          sp. oral taxon 338 str. F0234]
 gi|325691635|gb|EGD33602.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Capnocytophaga
          sp. oral taxon 338 str. F0234]
          Length = 65

 Score = 57.8 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+KKRF +T +GK++ + A K H + K++ K         ++ + D   V +
Sbjct: 1  MPKIKTKSSAKKRFKLTGSGKIKRKHAFKSHILTKKAKKRKLALTHATLVHTNDEASVRK 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|242278819|ref|YP_002990948.1| 50S ribosomal protein L35 [Desulfovibrio salexigens DSM 2638]
 gi|259647349|sp|C6BRG9|RL35_DESAD RecName: Full=50S ribosomal protein L35
 gi|242121713|gb|ACS79409.1| ribosomal protein L35 [Desulfovibrio salexigens DSM 2638]
          Length = 65

 Score = 57.8 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF+ T +GK + +  G RH + K++ K       +  + SA+  +V R
Sbjct: 1  MPKMKTRRGAAKRFAKTGSGKFKRRKQGLRHILTKKTAKRKSRLGQSATVDSANIGQVKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|357783|prf||1304251A ribosomal protein A
          Length = 65

 Score = 57.8 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGASKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVI 59


>gi|119774902|ref|YP_927642.1| 50S ribosomal protein L35 [Shewanella amazonensis SB2B]
 gi|166199832|sp|A1S6G6|RL35_SHEAM RecName: Full=50S ribosomal protein L35
 gi|119767402|gb|ABL99972.1| LSU ribosomal protein L35P [Shewanella amazonensis SB2B]
          Length = 64

 Score = 57.8 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   ++A  D   + R
Sbjct: 1  MPKMKTDRGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVAKVDVPAIAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 Q-LPY 63


>gi|110834701|ref|YP_693560.1| 50S ribosomal protein L35 [Alcanivorax borkumensis SK2]
 gi|254428154|ref|ZP_05041861.1| ribosomal protein L35 [Alcanivorax sp. DG881]
 gi|118572998|sp|Q0VNG0|RL35_ALCBS RecName: Full=50S ribosomal protein L35
 gi|110647812|emb|CAL17288.1| 50S ribosomal protein L35 [Alcanivorax borkumensis SK2]
 gi|196194323|gb|EDX89282.1| ribosomal protein L35 [Alcanivorax sp. DG881]
          Length = 64

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  TA+G  + + A K H + K+S+K IR  R    +   D   +++
Sbjct: 1  MPKIKTNRGAAKRFKKTASG-FKRKQAFKNHILTKKSSKTIRKLRPKQEVHENDVA-LVK 58

Query: 61 NYLPN 65
            +P 
Sbjct: 59 RMMPY 63


>gi|218514450|ref|ZP_03511290.1| 50S ribosomal protein L35 [Rhizobium etli 8C-3]
          Length = 43

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 39/43 (90%)

Query: 25 QAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPNGI 67
           AAGKRHGMIKR+NKFIR+ARGTMVLA  D +KVI+NYLPNG+
Sbjct: 1  AAAGKRHGMIKRTNKFIRDARGTMVLAEPDGRKVIKNYLPNGL 43


>gi|139437956|ref|ZP_01771509.1| Hypothetical protein COLAER_00495 [Collinsella aerofaciens ATCC
          25986]
 gi|133776153|gb|EBA39973.1| Hypothetical protein COLAER_00495 [Collinsella aerofaciens ATCC
          25986]
          Length = 63

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF  T TGK+    A K H + K+S K  R  R    +A+AD K +  
Sbjct: 1  MPKMKSHSGTKKRFRKTGTGKLMRAKAFKSHILSKKSTKRKRGFRQETEIAAADRKVIKS 60

Query: 61 NYL 63
             
Sbjct: 61 RLA 63


>gi|300933424|ref|ZP_07148680.1| 50S ribosomal protein L35 [Corynebacterium resistens DSM 45100]
          Length = 64

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  IT +GK+R + A +RH +  + ++  R  +GT  ++ AD K++ R  
Sbjct: 2  KQKTHKGAAKRIKITGSGKLRREQANRRHLLEGKPSRRTRRLKGTEDVSPADTKRMKRLL 61


>gi|15597938|ref|NP_251432.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PAO1]
 gi|116050732|ref|YP_790447.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152983973|ref|YP_001347872.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PA7]
 gi|218891078|ref|YP_002439944.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa LESB58]
 gi|254235720|ref|ZP_04929043.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa C3719]
 gi|254241195|ref|ZP_04934517.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 2192]
 gi|296388795|ref|ZP_06878270.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa PAb1]
 gi|313107811|ref|ZP_07793985.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 39016]
 gi|20139741|sp|Q9I0A1|RL35_PSEAE RecName: Full=50S ribosomal protein L35
 gi|122259857|sp|Q02NN9|RL35_PSEAB RecName: Full=50S ribosomal protein L35
 gi|166199821|sp|A6V487|RL35_PSEA7 RecName: Full=50S ribosomal protein L35
 gi|226725051|sp|B7V190|RL35_PSEA8 RecName: Full=50S ribosomal protein L35
 gi|9948820|gb|AAG06130.1|AE004702_7 50S ribosomal protein L35 [Pseudomonas aeruginosa PAO1]
 gi|115585953|gb|ABJ11968.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167651|gb|EAZ53162.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa C3719]
 gi|126194573|gb|EAZ58636.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 2192]
 gi|150959131|gb|ABR81156.1| ribosomal protein L35 [Pseudomonas aeruginosa PA7]
 gi|218771303|emb|CAW27068.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa LESB58]
 gi|310880487|gb|EFQ39081.1| 50S ribosomal protein L35 [Pseudomonas aeruginosa 39016]
          Length = 64

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TA G ++ + A K H + K + K  R  RGT +L  +D  +V R
Sbjct: 1  MPKMKTKSGAAKRFKKTAGG-LKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVER 59

Query: 61 NY 62
          + 
Sbjct: 60 SL 61


>gi|325662119|ref|ZP_08150737.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085916|ref|ZP_08334999.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471568|gb|EGC74788.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406839|gb|EGG86344.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 65

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRQATITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|218441163|ref|YP_002379492.1| 50S ribosomal protein L35 [Cyanothece sp. PCC 7424]
 gi|226724991|sp|B7K6S5|RL35_CYAP7 RecName: Full=50S ribosomal protein L35
 gi|218173891|gb|ACK72624.1| ribosomal protein L35 [Cyanothece sp. PCC 7424]
          Length = 67

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T +G K+  + A K H +  +S +   R   G  +++  D K+V
Sbjct: 1  MPKLKTRKAAAKRFRATGSGNKIFRRKAYKNHLLYHKSAERKRRRLSGLALVSEEDIKEV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|23099606|ref|NP_693072.1| 50S ribosomal protein L35 [Oceanobacillus iheyensis HTE831]
 gi|54036312|sp|Q8EPF6|RL35_OCEIH RecName: Full=50S ribosomal protein L35
 gi|22777836|dbj|BAC14107.1| 50S ribosomal protein L35 [Oceanobacillus iheyensis HTE831]
          Length = 64

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GKV+   A   H    +S K  R  R + +++S D K++ 
Sbjct: 1  MPKMKTHKGTAKRFKKTGSGKVKRSHAYTSHMFANKSQKQKRKLRKSALVSSGDYKRIK 59


>gi|255994771|ref|ZP_05427906.1| ribosomal protein L35 [Eubacterium saphenum ATCC 49989]
 gi|255993484|gb|EEU03573.1| ribosomal protein L35 [Eubacterium saphenum ATCC 49989]
          Length = 65

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF +T  GK++   A K H + K+S K  RN R   VL SAD +++    
Sbjct: 4  KMKTHKGAAKRFKLTGKGKLKRGKAFKSHILTKKSQKRKRNFRKAAVLTSADERRIKAAL 63


>gi|188586437|ref|YP_001917982.1| LSU ribosomal protein L35P [Natranaerobius thermophilus
          JW/NM-WN-LF]
 gi|226725039|sp|B2A5P0|RL35_NATTJ RecName: Full=50S ribosomal protein L35
 gi|179351124|gb|ACB85394.1| LSU ribosomal protein L35P [Natranaerobius thermophilus
          JW/NM-WN-LF]
          Length = 64

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 37/64 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T  GK++ + A K H + K++ K  RN R   V+ +   +K I+
Sbjct: 1  MPKMKTHKGAAKRFKKTGKGKIKRRKAFKSHILTKKTPKRKRNLRKPTVMKNKAEEKRIK 60

Query: 61 NYLP 64
            LP
Sbjct: 61 RLLP 64


>gi|11465736|ref|NP_053880.1| ribosomal protein L35 [Porphyra purpurea]
 gi|1710472|sp|P51270|RK35_PORPU RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|1276736|gb|AAC08156.1| 50S ribosomal protein L35 [Porphyra purpurea]
          Length = 65

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+ +  KRF ++++GK+    A K H + K+S+K  R+   T  + S DAK +
Sbjct: 1  MPKLKTSKAIAKRFKVSSSGKILRHKASKSHLLQKKSSKHRRHLSSTCQVDSRDAKNI 58


>gi|222529196|ref|YP_002573078.1| 50S ribosomal protein L35 [Caldicellulosiruptor bescii DSM 6725]
 gi|312127732|ref|YP_003992606.1| 50S ribosomal protein L35 [Caldicellulosiruptor hydrothermalis
          108]
 gi|312793384|ref|YP_004026307.1| 50S ribosomal protein L35 [Caldicellulosiruptor kristjanssonii
          177R1B]
 gi|312877041|ref|ZP_07737014.1| ribosomal protein L35 [Caldicellulosiruptor lactoaceticus 6A]
 gi|254802427|sp|B9MRK1|RL35_ANATD RecName: Full=50S ribosomal protein L35
 gi|222456043|gb|ACM60305.1| ribosomal protein L35 [Caldicellulosiruptor bescii DSM 6725]
 gi|311777751|gb|ADQ07237.1| ribosomal protein L35 [Caldicellulosiruptor hydrothermalis 108]
 gi|311796182|gb|EFR12538.1| ribosomal protein L35 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312180524|gb|ADQ40694.1| ribosomal protein L35 [Caldicellulosiruptor kristjanssonii
          177R1B]
          Length = 65

 Score = 57.8 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+V+ + + K V +
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKSRKRKRNLKKTVVVDATNVKAVKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|149912408|ref|ZP_01900951.1| ribosomal protein L35 [Moritella sp. PE36]
 gi|149804511|gb|EDM64600.1| ribosomal protein L35 [Moritella sp. PE36]
          Length = 64

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+N  + KRF  TA G  + + +  RH + K+S K  R+ RGT ++A  D   V R
Sbjct: 1  MPKLKSNKGAAKRFKKTANG-FKRKQSHLRHILTKKSTKRKRHLRGTEMVAKCDVASVKR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|153855815|ref|ZP_01996801.1| hypothetical protein DORLON_02822 [Dorea longicatena DSM 13814]
 gi|149751856|gb|EDM61787.1| hypothetical protein DORLON_02822 [Dorea longicatena DSM 13814]
          Length = 65

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKIKTNRAAAKRFKKTGTGKLKRNKAYKSHILTKKSTKRKRNLRKATIADATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 VL 62


>gi|92113924|ref|YP_573852.1| 50S ribosomal protein L35 [Chromohalobacter salexigens DSM 3043]
 gi|148840416|sp|Q1QWK5|RL35_CHRSD RecName: Full=50S ribosomal protein L35
 gi|91797014|gb|ABE59153.1| LSU ribosomal protein L35P [Chromohalobacter salexigens DSM 3043]
          Length = 64

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R  RG   +  AD K++I+
Sbjct: 1  MPKIKSNSGAAKRFKKTAHG-FKHKQSFRSHILTKKSTKRKRQLRGMKQIHDAD-KQLIQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|126174367|ref|YP_001050516.1| 50S ribosomal protein L35 [Shewanella baltica OS155]
 gi|153000741|ref|YP_001366422.1| 50S ribosomal protein L35 [Shewanella baltica OS185]
 gi|160875440|ref|YP_001554756.1| 50S ribosomal protein L35 [Shewanella baltica OS195]
 gi|217973358|ref|YP_002358109.1| 50S ribosomal protein L35 [Shewanella baltica OS223]
 gi|304408772|ref|ZP_07390393.1| ribosomal protein L35 [Shewanella baltica OS183]
 gi|307302775|ref|ZP_07582530.1| ribosomal protein L35 [Shewanella baltica BA175]
 gi|166199833|sp|A3D4I4|RL35_SHEB5 RecName: Full=50S ribosomal protein L35
 gi|166199834|sp|A6WNH0|RL35_SHEB8 RecName: Full=50S ribosomal protein L35
 gi|189042786|sp|A9L2Q7|RL35_SHEB9 RecName: Full=50S ribosomal protein L35
 gi|254802468|sp|B8EES8|RL35_SHEB2 RecName: Full=50S ribosomal protein L35
 gi|125997572|gb|ABN61647.1| LSU ribosomal protein L35P [Shewanella baltica OS155]
 gi|151365359|gb|ABS08359.1| ribosomal protein L35 [Shewanella baltica OS185]
 gi|160860962|gb|ABX49496.1| ribosomal protein L35 [Shewanella baltica OS195]
 gi|217498493|gb|ACK46686.1| ribosomal protein L35 [Shewanella baltica OS223]
 gi|304352593|gb|EFM16990.1| ribosomal protein L35 [Shewanella baltica OS183]
 gi|306913135|gb|EFN43557.1| ribosomal protein L35 [Shewanella baltica BA175]
 gi|315267630|gb|ADT94483.1| ribosomal protein L35 [Shewanella baltica OS678]
          Length = 64

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVSKADVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|189345703|ref|YP_001942232.1| 50S ribosomal protein L35 [Chlorobium limicola DSM 245]
 gi|226724979|sp|B3EEB9|RL35_CHLL2 RecName: Full=50S ribosomal protein L35
 gi|189339850|gb|ACD89253.1| ribosomal protein L35 [Chlorobium limicola DSM 245]
          Length = 64

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L     K++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRTRRLHQSTILDGTKEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|156502858|ref|YP_001428923.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica FTNF002-00]
 gi|290954129|ref|ZP_06558750.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|295312447|ref|ZP_06803219.1| 50S ribosomal protein L35 [Francisella tularensis subsp.
          holarctica URFT1]
 gi|166231185|sp|A7NDB4|RL35_FRATF RecName: Full=50S ribosomal protein L35
 gi|156253461|gb|ABU61967.1| ribosomal protein L35 [Francisella tularensis subsp. holarctica
          FTNF002-00]
          Length = 65

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT SS+ KRF  T  G  + + A + H   K + K  R+ RG   +A  D   +++
Sbjct: 1  MPKLKTKSSAAKRFKKTGKGGFKHRCANRAHINTKMTTKRKRHLRGMNQVAKVDTTSLVQ 60

Query: 61 NY 62
            
Sbjct: 61 QM 62


>gi|146296775|ref|YP_001180546.1| ribosomal protein L35 [Caldicellulosiruptor saccharolyticus DSM
          8903]
 gi|166231167|sp|A4XKC0|RL35_CALS8 RecName: Full=50S ribosomal protein L35
 gi|145410351|gb|ABP67355.1| LSU ribosomal protein L35P [Caldicellulosiruptor saccharolyticus
          DSM 8903]
          Length = 65

 Score = 57.8 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  +S K  RN + T+++ S + K V +
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKSRKRKRNLKKTVIVDSTNVKAVKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|302035782|ref|YP_003796104.1| 50S ribosomal protein L35 [Candidatus Nitrospira defluvii]
 gi|300603846|emb|CBK40178.1| 50S ribosomal protein L35 [Candidatus Nitrospira defluvii]
          Length = 65

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT+S +KKRF  T TGK+  + AG RH +  +     RN +G + ++SA    + R
Sbjct: 4  KMKTHSGAKKRFRRTGTGKLVRRKAGGRHLLTGKPRDRKRNLKGAVEVSSASTPALNR 61


>gi|260770315|ref|ZP_05879248.1| LSU ribosomal protein L35p [Vibrio furnissii CIP 102972]
 gi|260615653|gb|EEX40839.1| LSU ribosomal protein L35p [Vibrio furnissii CIP 102972]
 gi|315181384|gb|ADT88297.1| large subunit ribosomal protein L35 [Vibrio furnissii NCTC 11218]
          Length = 64

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   ++R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNSILPKCEVAGIVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 C-LPY 63


>gi|149194091|ref|ZP_01871189.1| 50S ribosomal protein L35 [Caminibacter mediatlanticus TB-2]
 gi|149136044|gb|EDM24522.1| 50S ribosomal protein L35 [Caminibacter mediatlanticus TB-2]
          Length = 65

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +  +GK++  +A + H + K+S K  RN R    + S + K+V 
Sbjct: 1  MPKMKTNRGAAKRFKVKKSGKIKRGSAYRSHILTKKSQKRKRNLRSPKYVDSTNIKEVK 59


>gi|150389421|ref|YP_001319470.1| ribosomal protein L35 [Alkaliphilus metalliredigens QYMF]
 gi|166988029|sp|A6TNP3|RL35_ALKMQ RecName: Full=50S ribosomal protein L35
 gi|149949283|gb|ABR47811.1| ribosomal protein L35 [Alkaliphilus metalliredigens QYMF]
          Length = 63

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF  T TG ++   A K H + K+S+K  RN R   V++  D K++ +
Sbjct: 1  MPKMKTHRGAAKRFKKTKTGLLKRMKAYKSHILTKKSSKRKRNLRKATVVSKGDFKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|307718472|ref|YP_003874004.1| 50S ribosomal protein L35 [Spirochaeta thermophila DSM 6192]
 gi|306532197|gb|ADN01731.1| 50S ribosomal protein L35 [Spirochaeta thermophila DSM 6192]
 gi|315187010|gb|EFU20767.1| LSU ribosomal protein L35P [Spirochaeta thermophila DSM 6578]
          Length = 65

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ KRFSITA GKV+ +    RH + K++ K  R+ R    L   + K+V R
Sbjct: 1  MPKMKTRKSAAKRFSITARGKVKYKKQNLRHILTKKAQKRKRHLRKPGHLPKMEEKRVKR 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 -LLPYG 65


>gi|323499331|ref|ZP_08104308.1| 50S ribosomal protein L35 [Vibrio sinaloensis DSM 21326]
 gi|323315719|gb|EGA68753.1| 50S ribosomal protein L35 [Vibrio sinaloensis DSM 21326]
          Length = 64

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59

Query: 61 NYLPN 65
            +P 
Sbjct: 60 -MMPY 63


>gi|258544546|ref|ZP_05704780.1| 50S ribosomal protein L35 [Cardiobacterium hominis ATCC 15826]
 gi|258520177|gb|EEV89036.1| 50S ribosomal protein L35 [Cardiobacterium hominis ATCC 15826]
          Length = 62

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  TA+G  +   +  RH + K+S K  R  RGT+++  +D K + 
Sbjct: 1  MPKMKTHRGAAKRFKKTASG-YKRSHSHARHILTKKSTKRKRGLRGTVMVHESDVKAIK 58


>gi|269114902|ref|YP_003302665.1| 50S ribosomal protein L35 [Mycoplasma hominis]
 gi|268322527|emb|CAX37262.1| 50S ribosomal protein L35 [Mycoplasma hominis ATCC 23114]
          Length = 62

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S  KKR SIT +GKV+   A + H    ++ K  R+AR    L+S+D K+
Sbjct: 1  MPKMKTKSGLKKRISITESGKVKRGQAFRSHLAQNKTTKQKRHARKATTLSSSDFKR 57


>gi|319440341|ref|ZP_07989497.1| 50S ribosomal protein L35 [Corynebacterium variabile DSM 44702]
          Length = 64

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  ++  D K++ R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSTRTRRLKGTTEVSGDDTKRIKRLL 61


>gi|301167260|emb|CBW26842.1| 50S ribosomal protein L35 [Bacteriovorax marinus SJ]
          Length = 65

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF     GK + + A  RH + K+++   + A  T  +  AD  +V +
Sbjct: 1  MPKMKTRRAAAKRFKAVGNGKFKRKRANLRHILEKKAHDCKKRAGKTDYVDQADLGRV-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPY 64


>gi|307545106|ref|YP_003897585.1| 50S ribosomal protein L35 [Halomonas elongata DSM 2581]
 gi|307217130|emb|CBV42400.1| 50S ribosomal protein L35 [Halomonas elongata DSM 2581]
          Length = 64

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K+NS + KRF  TA G  + + + + H + K+S K  R+ RG   +  AD K +++
Sbjct: 1  MPKIKSNSGAAKRFKKTANG-FKHKQSFRSHILTKKSTKRKRHLRGMKQIHDAD-KPLVQ 58

Query: 61 NYLPN 65
            LPN
Sbjct: 59 RMLPN 63


>gi|227501817|ref|ZP_03931866.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49725]
 gi|306835995|ref|ZP_07468987.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49726]
 gi|227077842|gb|EEI15805.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49725]
 gi|304568161|gb|EFM43734.1| 50S ribosomal protein L35 [Corynebacterium accolens ATCC 49726]
          Length = 64

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +K  R  +GT  ++ AD K+V R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSKRTRRLKGTESVSQADTKRVKRLL 61


>gi|68535910|ref|YP_250615.1| 50S ribosomal protein L35 [Corynebacterium jeikeium K411]
 gi|260577994|ref|ZP_05845918.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734]
 gi|148840418|sp|Q4JW10|RL35_CORJK RecName: Full=50S ribosomal protein L35
 gi|68263509|emb|CAI36997.1| 50S ribosomal protein L35 [Corynebacterium jeikeium K411]
 gi|258603884|gb|EEW17137.1| conserved domain protein [Corynebacterium jeikeium ATCC 43734]
          Length = 64

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  I+ +GK+R + A +RH +  + +K  R  +GT  +A AD K++ R  
Sbjct: 2  KQKTHKGAAKRIKISGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAPADVKRMKRLL 61


>gi|229824398|ref|ZP_04450467.1| hypothetical protein GCWU000282_01719 [Catonella morbi ATCC
          51271]
 gi|229786198|gb|EEP22312.1| hypothetical protein GCWU000282_01719 [Catonella morbi ATCC
          51271]
          Length = 65

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 31/61 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+    KR   T +GK++   A   H    ++ K  R  R   +++++D K++ +
Sbjct: 1  MPKQKTHRGLAKRVKKTGSGKLKRSHAFTSHRFHGKTKKQRRQLRQADLVSNSDYKRIKQ 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|330503837|ref|YP_004380706.1| 50S ribosomal protein L35 [Pseudomonas mendocina NK-01]
 gi|328918123|gb|AEB58954.1| 50S ribosomal protein L35 [Pseudomonas mendocina NK-01]
          Length = 64

 Score = 57.0 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + A K H + K S K  R  RG+ ++  +D  KV R
Sbjct: 1  MPKMKTKSGAAKRFLKTATG-FKHKHAFKSHILTKMSTKRKRQLRGSSLIGPSDKAKVER 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|170089293|ref|XP_001875869.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649129|gb|EDR13371.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 105

 Score = 57.0 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 3   KMKTNSSSKKRFSITATGK-VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
           KMK++S +KKR+   A+G   +   A   H    ++         T    SA + K+ + 
Sbjct: 39  KMKSHSGAKKRWRSLASGSDFKRGKACHSHLNASKNAARKNRLSTTAYSTSAQSHKLKKL 98

Query: 62  YLPNG 66
            LP G
Sbjct: 99  LLPYG 103


>gi|270158049|ref|ZP_06186706.1| 50S ribosomal protein L35 [Legionella longbeachae D-4968]
 gi|289163683|ref|YP_003453821.1| 50S ribosomal protein L35 [Legionella longbeachae NSW150]
 gi|269990074|gb|EEZ96328.1| 50S ribosomal protein L35 [Legionella longbeachae D-4968]
 gi|288856856|emb|CBJ10667.1| 50S ribosomal protein L35 [Legionella longbeachae NSW150]
          Length = 66

 Score = 57.0 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          MPK+K++  + KRF  TA+G ++ + A + H + K+S K  R  R
Sbjct: 1  MPKLKSHRGASKRFRKTASGAIKRRGAYRNHILTKKSTKQKRQLR 45


>gi|110598678|ref|ZP_01386943.1| ribosomal protein L35 [Chlorobium ferrooxidans DSM 13031]
 gi|110339731|gb|EAT58241.1| ribosomal protein L35 [Chlorobium ferrooxidans DSM 13031]
          Length = 64

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L SA AK++ R
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLDSAKAKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|114797968|ref|YP_759160.1| 50S ribosomal protein L35 [Hyphomonas neptunium ATCC 15444]
 gi|122942759|sp|Q0C533|RL35_HYPNA RecName: Full=50S ribosomal protein L35
 gi|114738142|gb|ABI76267.1| ribosomal protein L35 [Hyphomonas neptunium ATCC 15444]
          Length = 66

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 16 ITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPNGI 67
          ITATGK++   AGKRH ++  + K+IR  RGT V A AD  +V + YLP G+
Sbjct: 16 ITATGKLKHGVAGKRHRLMSHNAKYIRQNRGTSVGAKADEARVKK-YLPYGL 66


>gi|32307550|gb|AAP79180.1| ribosomal protein rpL35 [Bigelowiella natans]
          Length = 123

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 28/54 (51%)

Query: 5   KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
           KT  ++ KRF +T+ GKV ++ AGK+H   K S K         V+  AD   V
Sbjct: 59  KTGKAAAKRFKVTSGGKVLSKQAGKQHLNTKMSRKNKMRLGDKRVIEKADISNV 112


>gi|54295554|ref|YP_127969.1| 50S ribosomal protein L35 [Legionella pneumophila str. Lens]
 gi|54298704|ref|YP_125073.1| 50S ribosomal protein L35 [Legionella pneumophila str. Paris]
 gi|148358550|ref|YP_001249757.1| 50S ribosomal protein L35 [Legionella pneumophila str. Corby]
 gi|296108361|ref|YP_003620062.1| hypothetical protein lpa_03956 [Legionella pneumophila 2300/99
          Alcoy]
 gi|81679130|sp|Q5WT84|RL35_LEGPL RecName: Full=50S ribosomal protein L35
 gi|81679384|sp|Q5X1H5|RL35_LEGPA RecName: Full=50S ribosomal protein L35
 gi|166231193|sp|A5IAL1|RL35_LEGPC RecName: Full=50S ribosomal protein L35
 gi|53752489|emb|CAH13921.1| 50S ribosomal protein L35 [Legionella pneumophila str. Paris]
 gi|53755386|emb|CAH16882.1| 50S ribosomal protein L35 [Legionella pneumophila str. Lens]
 gi|148280323|gb|ABQ54411.1| 50S ribosomal protein L35 [Legionella pneumophila str. Corby]
 gi|295650263|gb|ADG26110.1| hypothetical protein lpa_03956 [Legionella pneumophila 2300/99
          Alcoy]
          Length = 66

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNAR 45
          MPK+K++  + KRF  TA+G ++ + A + H + K+S K  R+ R
Sbjct: 1  MPKLKSHRGAAKRFRKTASGAIKRRGAYRNHILTKKSTKQKRHLR 45


>gi|312135021|ref|YP_004002359.1| 50S ribosomal protein L35 [Caldicellulosiruptor owensensis OL]
 gi|311775072|gb|ADQ04559.1| ribosomal protein L35 [Caldicellulosiruptor owensensis OL]
          Length = 65

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  I+ +GK   + AGK H +  ++ K  RN + T+V+ + + K V +
Sbjct: 1  MPKLKTHRGLAKRIKISGSGKYLRKKAGKSHLLSGKTRKRKRNLKKTVVVDATNVKAVKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|120554976|ref|YP_959327.1| ribosomal protein L35 [Marinobacter aquaeolei VT8]
 gi|149374487|ref|ZP_01892261.1| 50S ribosomal protein L35 [Marinobacter algicola DG893]
 gi|166231195|sp|A1U2C1|RL35_MARAV RecName: Full=50S ribosomal protein L35
 gi|120324825|gb|ABM19140.1| LSU ribosomal protein L35P [Marinobacter aquaeolei VT8]
 gi|149361190|gb|EDM49640.1| 50S ribosomal protein L35 [Marinobacter algicola DG893]
          Length = 63

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S + KRF  TATG  + + +   H + K+S K  R  RGT ++A +D   + R
Sbjct: 1  MPKMKTKSGATKRFKKTATG-FKHKQSFTSHILTKKSPKRKRQLRGTKLIAKSDVASIKR 59


>gi|209695237|ref|YP_002263166.1| 50S ribosomal protein L35 [Aliivibrio salmonicida LFI1238]
 gi|226712607|sp|B6EN32|RL35_ALISL RecName: Full=50S ribosomal protein L35
 gi|208009189|emb|CAQ79443.1| 50S ribosomal subunit protein L35 [Aliivibrio salmonicida
          LFI1238]
          Length = 64

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +LA  +   V+R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNSLLAKCEVAAVLR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|114563197|ref|YP_750710.1| 50S ribosomal protein L35 [Shewanella frigidimarina NCIMB 400]
 gi|162210775|ref|YP_562714.2| 50S ribosomal protein L35 [Shewanella denitrificans OS217]
 gi|170726835|ref|YP_001760861.1| 50S ribosomal protein L35 [Shewanella woodyi ATCC 51908]
 gi|122299728|sp|Q082E3|RL35_SHEFN RecName: Full=50S ribosomal protein L35
 gi|226725065|sp|B1KG59|RL35_SHEWM RecName: Full=50S ribosomal protein L35
 gi|114334490|gb|ABI71872.1| LSU ribosomal protein L35P [Shewanella frigidimarina NCIMB 400]
 gi|169812182|gb|ACA86766.1| ribosomal protein L35 [Shewanella woodyi ATCC 51908]
          Length = 64

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   ++A +D   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|260589750|ref|ZP_05855663.1| ribosomal protein L35 [Blautia hansenii DSM 20583]
 gi|331083181|ref|ZP_08332297.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539990|gb|EEX20559.1| ribosomal protein L35 [Blautia hansenii DSM 20583]
 gi|330404570|gb|EGG84110.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 65

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKMKTTKAAAKRFKSTGTGKLKRNKAYKSHILTKKSQKRKRNLRKAAITDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|25028066|ref|NP_738120.1| 50S ribosomal protein L35 [Corynebacterium efficiens YS-314]
 gi|259505618|ref|ZP_05748520.1| conserved domain protein [Corynebacterium efficiens YS-314]
 gi|54036314|sp|Q8FTQ1|RL35_COREF RecName: Full=50S ribosomal protein L35
 gi|23493350|dbj|BAC18320.1| putative 50S ribosomal protein L35 [Corynebacterium efficiens
          YS-314]
 gi|259166783|gb|EEW51337.1| conserved domain protein [Corynebacterium efficiens YS-314]
          Length = 64

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+  + A +RH +  + +   R  +G + ++ AD K++ R  
Sbjct: 2  KNKTHKGTAKRVKVTGSGKLVREQANRRHLLEGKPSTRTRRLKGIVEVSPADTKRMKRLL 61


>gi|282855601|ref|ZP_06264915.1| ribosomal protein L35 [Pyramidobacter piscolens W5455]
 gi|282586531|gb|EFB91785.1| ribosomal protein L35 [Pyramidobacter piscolens W5455]
          Length = 66

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+S +KKRFS T +GK++ Q  G+RH +  ++ K  R  R   +LA+   + ++R  
Sbjct: 4  KAKTHSGAKKRFSYTGSGKIKYQKNGRRHLLSTKNAKRHRRLRQAGLLANGQEE-MLRLM 62

Query: 63 LP 64
          +P
Sbjct: 63 MP 64


>gi|146311382|ref|YP_001176456.1| 50S ribosomal protein L35 [Enterobacter sp. 638]
 gi|166988034|sp|A4W9M5|RL35_ENT38 RecName: Full=50S ribosomal protein L35
 gi|145318258|gb|ABP60405.1| LSU ribosomal protein L35P [Enterobacter sp. 638]
          Length = 65

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 1  MPKIKTVRGAAKRFKKTGKGGFKHKRANLRHILTKKATKRKRHLRPKAMVSKGDLGLVI 59


>gi|15601054|ref|NP_232685.1| 50S ribosomal protein L35 [Vibrio cholerae O1 biovar eltor str.
          N16961]
 gi|121591864|ref|ZP_01679035.1| ribosomal protein L35 [Vibrio cholerae 2740-80]
 gi|121730162|ref|ZP_01682556.1| ribosomal protein L35 [Vibrio cholerae V52]
 gi|147672076|ref|YP_001215776.1| 50S ribosomal protein L35 [Vibrio cholerae O395]
 gi|153217651|ref|ZP_01951332.1| ribosomal protein L35 [Vibrio cholerae 1587]
 gi|153803266|ref|ZP_01957852.1| ribosomal protein L35 [Vibrio cholerae MZO-3]
 gi|153817543|ref|ZP_01970210.1| ribosomal protein L35 [Vibrio cholerae NCTC 8457]
 gi|153829070|ref|ZP_01981737.1| ribosomal protein L35 [Vibrio cholerae 623-39]
 gi|227811912|ref|YP_002811922.1| ribosomal protein L35 [Vibrio cholerae M66-2]
 gi|229506557|ref|ZP_04396066.1| LSU ribosomal protein L35p [Vibrio cholerae BX 330286]
 gi|229510647|ref|ZP_04400127.1| LSU ribosomal protein L35p [Vibrio cholerae B33]
 gi|229514761|ref|ZP_04404222.1| LSU ribosomal protein L35p [Vibrio cholerae TMA 21]
 gi|229517222|ref|ZP_04406667.1| LSU ribosomal protein L35p [Vibrio cholerae RC9]
 gi|229522962|ref|ZP_04412376.1| LSU ribosomal protein L35p [Vibrio cholerae TM 11079-80]
 gi|229526100|ref|ZP_04415504.1| LSU ribosomal protein L35p [Vibrio cholerae bv. albensis VL426]
 gi|229527751|ref|ZP_04417142.1| LSU ribosomal protein L35p [Vibrio cholerae 12129(1)]
 gi|229606036|ref|YP_002876740.1| 50S ribosomal protein L35 [Vibrio cholerae MJ-1236]
 gi|254225616|ref|ZP_04919224.1| ribosomal protein L35 [Vibrio cholerae V51]
 gi|254284961|ref|ZP_04959927.1| ribosomal protein L35 [Vibrio cholerae AM-19226]
 gi|255745912|ref|ZP_05419859.1| LSU ribosomal protein L35p [Vibrio cholera CIRS 101]
 gi|261212790|ref|ZP_05927074.1| LSU ribosomal protein L35p [Vibrio sp. RC341]
 gi|262163531|ref|ZP_06031277.1| LSU ribosomal protein L35p [Vibrio cholerae INDRE 91/1]
 gi|262164339|ref|ZP_06032077.1| LSU ribosomal protein L35p [Vibrio mimicus VM223]
 gi|262168210|ref|ZP_06035908.1| LSU ribosomal protein L35p [Vibrio cholerae RC27]
 gi|262173544|ref|ZP_06041221.1| LSU ribosomal protein L35p [Vibrio mimicus MB-451]
 gi|262403448|ref|ZP_06080006.1| LSU ribosomal protein L35p [Vibrio sp. RC586]
 gi|297579608|ref|ZP_06941535.1| ribosomal protein L35 [Vibrio cholerae RC385]
 gi|298500135|ref|ZP_07009941.1| LSU ribosomal protein L35 [Vibrio cholerae MAK 757]
 gi|7674313|sp|O68845|RL35_VIBCH RecName: Full=50S ribosomal protein L35
 gi|172047341|sp|A5EZ16|RL35_VIBC3 RecName: Full=50S ribosomal protein L35
 gi|254803582|sp|C3LUW0|RL35_VIBCM RecName: Full=50S ribosomal protein L35
 gi|5825615|gb|AAD53321.1|AF179591_3 ribosomal protein L35 [Vibrio cholerae]
 gi|3095163|gb|AAC38422.1| ribosomal protein L35 [Vibrio cholerae]
 gi|9657686|gb|AAF96197.1| ribosomal protein L35 [Vibrio cholerae O1 biovar El Tor str.
          N16961]
 gi|121546271|gb|EAX56567.1| ribosomal protein L35 [Vibrio cholerae 2740-80]
 gi|121628081|gb|EAX60621.1| ribosomal protein L35 [Vibrio cholerae V52]
 gi|124113401|gb|EAY32221.1| ribosomal protein L35 [Vibrio cholerae 1587]
 gi|124121206|gb|EAY39949.1| ribosomal protein L35 [Vibrio cholerae MZO-3]
 gi|125621831|gb|EAZ50157.1| ribosomal protein L35 [Vibrio cholerae V51]
 gi|126511968|gb|EAZ74562.1| ribosomal protein L35 [Vibrio cholerae NCTC 8457]
 gi|146314459|gb|ABQ18999.1| ribosomal protein L35 [Vibrio cholerae O395]
 gi|148875499|gb|EDL73634.1| ribosomal protein L35 [Vibrio cholerae 623-39]
 gi|150424964|gb|EDN16741.1| ribosomal protein L35 [Vibrio cholerae AM-19226]
 gi|227011054|gb|ACP07265.1| ribosomal protein L35 [Vibrio cholerae M66-2]
 gi|227014957|gb|ACP11166.1| ribosomal protein L35 [Vibrio cholerae O395]
 gi|229334113|gb|EEN99598.1| LSU ribosomal protein L35p [Vibrio cholerae 12129(1)]
 gi|229336258|gb|EEO01276.1| LSU ribosomal protein L35p [Vibrio cholerae bv. albensis VL426]
 gi|229340179|gb|EEO05187.1| LSU ribosomal protein L35p [Vibrio cholerae TM 11079-80]
 gi|229345258|gb|EEO10231.1| LSU ribosomal protein L35p [Vibrio cholerae RC9]
 gi|229348741|gb|EEO13699.1| LSU ribosomal protein L35p [Vibrio cholerae TMA 21]
 gi|229353092|gb|EEO18032.1| LSU ribosomal protein L35p [Vibrio cholerae B33]
 gi|229356908|gb|EEO21826.1| LSU ribosomal protein L35p [Vibrio cholerae BX 330286]
 gi|229372522|gb|ACQ62944.1| LSU ribosomal protein L35p [Vibrio cholerae MJ-1236]
 gi|255735666|gb|EET91064.1| LSU ribosomal protein L35p [Vibrio cholera CIRS 101]
 gi|260837855|gb|EEX64532.1| LSU ribosomal protein L35p [Vibrio sp. RC341]
 gi|261890902|gb|EEY36889.1| LSU ribosomal protein L35p [Vibrio mimicus MB-451]
 gi|262023453|gb|EEY42156.1| LSU ribosomal protein L35p [Vibrio cholerae RC27]
 gi|262026719|gb|EEY45386.1| LSU ribosomal protein L35p [Vibrio mimicus VM223]
 gi|262028098|gb|EEY46757.1| LSU ribosomal protein L35p [Vibrio cholerae INDRE 91/1]
 gi|262349952|gb|EEY99087.1| LSU ribosomal protein L35p [Vibrio sp. RC586]
 gi|297535254|gb|EFH74088.1| ribosomal protein L35 [Vibrio cholerae RC385]
 gi|297542116|gb|EFH78167.1| LSU ribosomal protein L35 [Vibrio cholerae MAK 757]
 gi|327485487|gb|AEA79893.1| LSU ribosomal protein L35p [Vibrio cholerae LMA3894-4]
 gi|327485492|gb|AEA79898.1| LSU ribosomal protein L35p [Vibrio cholerae LMA3894-4]
          Length = 64

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|237785423|ref|YP_002906128.1| 50S ribosomal protein L35 [Corynebacterium kroppenstedtii DSM
          44385]
 gi|259647347|sp|C4LID0|RL35_CORK4 RecName: Full=50S ribosomal protein L35
 gi|237758335|gb|ACR17585.1| 50S ribosomal protein L35 [Corynebacterium kroppenstedtii DSM
          44385]
          Length = 64

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+S  KKR   T +GK+R + A +RH +  + +   R  +G   ++  D K+V R  
Sbjct: 2  KQKTHSGIKKRIKKTGSGKLRREQANRRHLLEGKPSTRTRRLKGDTSVSRNDTKRVNRLL 61


>gi|56964453|ref|YP_176184.1| 50S ribosomal protein L35 [Bacillus clausii KSM-K16]
 gi|81678827|sp|Q5WEI7|RL35_BACSK RecName: Full=50S ribosomal protein L35
 gi|56910696|dbj|BAD65223.1| 50S ribosomal protein L35 [Bacillus clausii KSM-K16]
          Length = 67

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKT+  + KRF  T TGK++   A   H    +S K  R  R   ++ S D K++
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKRSHAYTSHMFRHKSQKQKRKLRKAAIVHSGDFKRI 58


>gi|153872753|ref|ZP_02001552.1| Ribosomal protein L35 [Beggiatoa sp. PS]
 gi|152070779|gb|EDN68446.1| Ribosomal protein L35 [Beggiatoa sp. PS]
          Length = 64

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  +A G ++   + +RH + K++ K  R  R  M++  AD   ++ 
Sbjct: 1  MPKMKTNRGAAKRFKRSAGG-LKRGQSHRRHILTKKTTKRKRLLRSPMMINKADVG-IVN 58

Query: 61 NYLPN 65
            LP 
Sbjct: 59 RLLPY 63


>gi|227833183|ref|YP_002834890.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
 gi|262184169|ref|ZP_06043590.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
 gi|254802445|sp|C3PGJ8|RL35_CORA7 RecName: Full=50S ribosomal protein L35
 gi|227454199|gb|ACP32952.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC
          700975]
          Length = 64

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +K  R  +GT  +A AD K+V R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAKADTKRVKRLL 61


>gi|167767665|ref|ZP_02439718.1| hypothetical protein CLOSS21_02198 [Clostridium sp. SS2/1]
 gi|317499154|ref|ZP_07957431.1| ribosomal protein L35 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710682|gb|EDS21261.1| hypothetical protein CLOSS21_02198 [Clostridium sp. SS2/1]
 gi|291560799|emb|CBL39599.1| LSU ribosomal protein L35P [butyrate-producing bacterium SSC/2]
 gi|316893567|gb|EFV15772.1| ribosomal protein L35 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 65

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF  T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKMKTCRAAAKRFKKTGTGKLKRNKAYKSHILTKKSPKRKRNLRKAAMTDATNEKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|297183198|gb|ADI19339.1| hypothetical protein [uncultured delta proteobacterium
          HF0500_03A04]
          Length = 62

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KRF +T +GKV+ + A  RHGM KRS    R  R    +   D   V R  L
Sbjct: 1  MKTHRGAAKRFRVTGSGKVKRKRAYLRHGMRKRSQDVKRALRKKTYVTVEDMGLVER-LL 59

Query: 64 PN 65
          PN
Sbjct: 60 PN 61


>gi|229916377|ref|YP_002885023.1| 50S ribosomal protein L35 [Exiguobacterium sp. AT1b]
 gi|259647355|sp|C4L456|RL35_EXISA RecName: Full=50S ribosomal protein L35
 gi|229467806|gb|ACQ69578.1| ribosomal protein L35 [Exiguobacterium sp. AT1b]
          Length = 64

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++  + KRF  TA+GK++   A   H    +S K  R  R   ++++ D K++ 
Sbjct: 1  MPKMKSHRGASKRFKRTASGKLKRSHAYTSHLFANKSTKAKRKLRKGAIVSAGDFKRIR 59


>gi|293363934|ref|ZP_06610670.1| ribosomal protein L35 [Mycoplasma alligatoris A21JP2]
 gi|292552424|gb|EFF41198.1| ribosomal protein L35 [Mycoplasma alligatoris A21JP2]
          Length = 62

 Score = 57.0 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S+ KKR  IT TGKV  + A + H    ++ K  R +R +++++ +D K+   
Sbjct: 1  MPKMKTKSALKKRIKITGTGKVMREQAYRSHLAQNKTTKQKRQSRKSVLMSKSDVKRFKA 60

Query: 61 NY 62
           +
Sbjct: 61 LF 62


>gi|27904624|ref|NP_777750.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Bp (Baizongia
          pistaciae)]
 gi|31076930|sp|Q89AV9|RL35_BUCBP RecName: Full=50S ribosomal protein L35
 gi|27904021|gb|AAO26855.1| 50S ribosomal protein L35 [Buchnera aphidicola str. Bp (Baizongia
          pistaciae)]
          Length = 65

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRF  T +GK + + A  RH + K++  + R+ R  ++++  D +KV R
Sbjct: 1  MPKIKTLRSAAKRFKKTESGKFKRKQAHLRHILTKKNTHYKRHLRSKVMISKKDIQKV-R 59

Query: 61 NYLPN 65
           +LP 
Sbjct: 60 LFLPY 64


>gi|262275834|ref|ZP_06053643.1| LSU ribosomal protein L35p [Grimontia hollisae CIP 101886]
 gi|262219642|gb|EEY70958.1| LSU ribosomal protein L35p [Grimontia hollisae CIP 101886]
          Length = 64

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  T  G  + + A KRH + KR+ K  R  R   +L   +   V+R
Sbjct: 1  MPKMKANKGAAKRFKKTGGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEIGAVVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|27365718|ref|NP_761246.1| 50S ribosomal protein L35 [Vibrio vulnificus CMCP6]
 gi|161486622|ref|NP_934736.2| 50S ribosomal protein L35 [Vibrio vulnificus YJ016]
 gi|320156124|ref|YP_004188503.1| 50S ribosomal protein L35p [Vibrio vulnificus MO6-24/O]
 gi|31340360|sp|Q8DA11|RL35_VIBVU RecName: Full=50S ribosomal protein L35
 gi|54036281|sp|Q7MK67|RL35_VIBVY RecName: Full=50S ribosomal protein L35
 gi|27361867|gb|AAO10773.1| ribosomal protein L35 [Vibrio vulnificus CMCP6]
 gi|319931436|gb|ADV86300.1| LSU ribosomal protein L35p [Vibrio vulnificus MO6-24/O]
          Length = 64

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKNNKGAAKRFKKTAGG-IKYKHATKRHILTKRTTKNKRQLRPNSLLPRCEVAAVAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|46196114|gb|AAS80532.1| LSU ribosomal protein L35P [Thermus thermophilus HB27]
          Length = 62

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  +KKR  ITA+GKV A   GKRH   ++S K IR      VLA  +A+++ +  L
Sbjct: 1  MKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERI-KLLL 59

Query: 64 PN 65
          P 
Sbjct: 60 PY 61


>gi|127512958|ref|YP_001094155.1| 50S ribosomal protein L35 [Shewanella loihica PV-4]
 gi|166199835|sp|A3QEJ8|RL35_SHELP RecName: Full=50S ribosomal protein L35
 gi|126638253|gb|ABO23896.1| LSU ribosomal protein L35P [Shewanella loihica PV-4]
          Length = 64

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+   +KRF  TA G  + + A  RH + K+S K  R+ R   ++A +D   + R
Sbjct: 1  MPKMKTDKGVQKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVAKSDVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|57234474|ref|YP_181485.1| 50S ribosomal protein L35 [Dehalococcoides ethenogenes 195]
 gi|148840420|sp|Q3Z8G4|RL35_DEHE1 RecName: Full=50S ribosomal protein L35
 gi|57224922|gb|AAW39979.1| ribosomal protein L35 [Dehalococcoides ethenogenes 195]
          Length = 67

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK+      K H    +S +  R       +A  D  ++ +
Sbjct: 1  MPKMKTRKTAAKRFHVTGTGKIMRSKGMKSHLRRNKSARVRRQFDEMSQVAGVDRARIQK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LIPYGV 66


>gi|327439267|dbj|BAK15632.1| ribosomal protein L35 [Solibacillus silvestris StLB046]
          Length = 66

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T TGK++   A   H    +S K  R+ R   V  S D K++ 
Sbjct: 1  MPKMKTHRGAAKRFKKTGTGKLKFDRAYGSHLFANKSTKAKRHLRKAKVATSGDFKRIR 59


>gi|319777081|ref|YP_004136732.1| 50S ribosomal protein l35 [Mycoplasma fermentans M64]
 gi|464636|sp|Q05428|RL35_MYCFE RecName: Full=50S ribosomal protein L35
 gi|150150|gb|AAA25414.1| ribosomal protein L35 [Mycoplasma fermentans]
 gi|238809865|dbj|BAH69655.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038156|gb|ADV34355.1| 50S ribosomal protein L35 [Mycoplasma fermentans M64]
          Length = 62

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT S+ KKR  IT TGK+  + A + H    ++ K  R AR ++ + S+D K+  
Sbjct: 1  MPKMKTKSALKKRIKITGTGKIMREQAYRSHLSQNKTTKQKRQARKSVQMHSSDVKRFK 59


>gi|157165502|ref|YP_001465939.1| 50S ribosomal protein L35 [Campylobacter concisus 13826]
 gi|166231168|sp|A7ZAY1|RL35_CAMC1 RecName: Full=50S ribosomal protein L35
 gi|112801824|gb|EAT99168.1| ribosomal protein L35 [Campylobacter concisus 13826]
          Length = 63

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF +    K++  +A + H + K+ +K +R+ RG   + S +   V +
Sbjct: 1  MPKMKTVRGAAKRFKV-GKNKIKRGSAFRSHILTKKPSKRMRDLRGPQYVDSTNVPAVRK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|289809609|ref|ZP_06540238.1| 50S ribosomal protein L35 [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 70

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KR   T  G  + + A  RH + K++ K  R+ R   +++  D   VI 
Sbjct: 6  MPKIKTVRGAAKRLQKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIA 65

Query: 61 NYLPN 65
            LP 
Sbjct: 66 C-LPY 69


>gi|89074410|ref|ZP_01160892.1| 50S ribosomal protein L35 [Photobacterium sp. SKA34]
 gi|90579637|ref|ZP_01235446.1| 50S ribosomal protein L35 [Vibrio angustum S14]
 gi|330445797|ref|ZP_08309449.1| ribosomal protein L35 [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
 gi|89049897|gb|EAR55438.1| 50S ribosomal protein L35 [Photobacterium sp. SKA34]
 gi|90439211|gb|EAS64393.1| 50S ribosomal protein L35 [Vibrio angustum S14]
 gi|328489988|dbj|GAA03946.1| ribosomal protein L35 [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
          Length = 64

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKTNRGAAKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|148654115|ref|YP_001281208.1| 50S ribosomal protein L35 [Psychrobacter sp. PRwf-1]
 gi|172048592|sp|A5WHW7|RL35_PSYWF RecName: Full=50S ribosomal protein L35
 gi|148573199|gb|ABQ95258.1| LSU ribosomal protein L35P [Psychrobacter sp. PRwf-1]
          Length = 65

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT   + KRF  TA G  + + A KRH + K+S K IR  RGT ++  AD   V R
Sbjct: 4  KMKTKRGAAKRFKKTANG-FKRKQAFKRHILTKKSPKRIRQLRGTKLVHVADVAAVRR 60


>gi|218886084|ref|YP_002435405.1| 50S ribosomal protein L35 [Desulfovibrio vulgaris str. 'Miyazaki
          F']
 gi|226724997|sp|B8DPN0|RL35_DESVM RecName: Full=50S ribosomal protein L35
 gi|218757038|gb|ACL07937.1| ribosomal protein L35 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 65

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRFS+T +GK + +    RH + K++ K       +  + S + K V R
Sbjct: 1  MPKIKTRRSAAKRFSVTGSGKFKRRKQNLRHILTKKNAKRRMRLGQSATVDSTNEKAVRR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MMPY 64


>gi|325287303|ref|YP_004263093.1| 50S ribosomal protein L35 [Cellulophaga lytica DSM 7489]
 gi|324322757|gb|ADY30222.1| 50S ribosomal protein L35 [Cellulophaga lytica DSM 7489]
          Length = 62

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MKT SS+KKRF +T TGK++ + A K H + K+S K       + ++  +D K +    
Sbjct: 1  MKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLALTHSGLVHESDVKSIKEQL 59


>gi|163752535|ref|ZP_02159721.1| ribosomal protein L35 [Shewanella benthica KT99]
 gi|294141072|ref|YP_003557050.1| 50S ribosomal protein L35 [Shewanella violacea DSS12]
 gi|161327590|gb|EDP98788.1| ribosomal protein L35 [Shewanella benthica KT99]
 gi|293327541|dbj|BAJ02272.1| ribosomal protein L35 [Shewanella violacea DSS12]
          Length = 64

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R   +++ AD   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCLVSKADMPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|332975687|gb|EGK12572.1| 50S ribosomal protein L35 [Psychrobacter sp. 1501(2011)]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT   + KRF  TA G  + + A KRH + K+S K IR  RGT ++  AD   V R
Sbjct: 4  KMKTKRGAAKRFKKTANG-FKRKQAFKRHILTKKSPKRIRQLRGTKLVHVADVAAVRR 60


>gi|317487455|ref|ZP_07946242.1| ribosomal protein L35 [Bilophila wadsworthia 3_1_6]
 gi|316921314|gb|EFV42613.1| ribosomal protein L35 [Bilophila wadsworthia 3_1_6]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRFS T TGK + +    RH + K+  K         ++ + + K V R
Sbjct: 1  MPKMKTRRCAAKRFSTTGTGKFKRRRQNLRHILTKKDAKRKMRLGQGALVDATNVKAVRR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -MMPY 64


>gi|90021226|ref|YP_527053.1| 50S ribosomal protein L35 [Saccharophagus degradans 2-40]
 gi|148887107|sp|Q21KD8|RL35_SACD2 RecName: Full=50S ribosomal protein L35
 gi|89950826|gb|ABD80841.1| LSU ribosomal protein L35P [Saccharophagus degradans 2-40]
          Length = 64

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K KT+S + KRF  TA+G  + + A K H + K + K  R  RGT +L +AD   V R
Sbjct: 1  MSKAKTHSGAAKRFKKTASG-YKHKHAFKSHILTKMTTKRKRQLRGTSLLNAADKPAVDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|301114185|ref|XP_002998862.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262110956|gb|EEY69008.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 125

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+KT ++ KKRF +   G V+   A KRH   K++ + IR     + +     K V+R  
Sbjct: 63  KLKTKAAVKKRFKVNCNGLVKRAQANKRHIATKKTRERIRRLGKPVFVQGQIRKNVLRML 122


>gi|220903766|ref|YP_002479078.1| 50S ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|254802447|sp|B8J4E2|RL35_DESDA RecName: Full=50S ribosomal protein L35
 gi|219868065|gb|ACL48400.1| ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KRFS T +GK + +    RH + K++         +  +  A+ K V R
Sbjct: 1  MPKIKTRRSAAKRFSQTGSGKFKRRRQNLRHILTKKAASRKMRLGQSTTVDKANEKAVRR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 -MLPNG 65


>gi|319760486|ref|YP_004124424.1| 50S ribosomal protein L35 [Candidatus Blochmannia vafer str.
          BVAF]
 gi|318039200|gb|ADV33750.1| 50S ribosomal protein L35 [Candidatus Blochmannia vafer str.
          BVAF]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+KKRF+ T++GK + + A  RH + K+S+K  R+ R   VL++    K+ +
Sbjct: 1  MPKIKTLKSAKKRFTKTSSGKYKYKHAYTRHILTKKSSKLKRHLRHRSVLSNMYISKITK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -ILPY 64


>gi|222151591|ref|YP_002560747.1| 50S ribosomal protein L35 [Macrococcus caseolyticus JCSC5402]
 gi|254802457|sp|B9E783|RL35_MACCJ RecName: Full=50S ribosomal protein L35
 gi|222120716|dbj|BAH18051.1| 50S ribosomal protein L35 [Macrococcus caseolyticus JCSC5402]
          Length = 66

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KR   T +GK++   A   H    +S K  R  R   +++  D K+V +
Sbjct: 1  MPKMKTHRGGAKRVKRTGSGKLKRSRAYTSHLFANKSTKQKRGLRKASLVSKGDQKRVAQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|213966327|ref|ZP_03394509.1| ribosomal protein L35 [Corynebacterium amycolatum SK46]
 gi|213951033|gb|EEB62433.1| ribosomal protein L35 [Corynebacterium amycolatum SK46]
          Length = 64

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  +A +D K+V R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSTRTRRLKGTTDVAKSDVKRVKRLL 61


>gi|78189669|ref|YP_380007.1| 50S ribosomal protein L35 [Chlorobium chlorochromatii CaD3]
 gi|148840413|sp|Q3APW1|RL35_CHLCH RecName: Full=50S ribosomal protein L35
 gi|78171868|gb|ABB28964.1| LSU ribosomal protein L35P [Chlorobium chlorochromatii CaD3]
          Length = 64

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++  + KRF +TA+GK++ +     H + K++ K  R    + +L    AK++ 
Sbjct: 1  MPKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIK 59


>gi|296271845|ref|YP_003654476.1| 50S ribosomal protein L35 [Arcobacter nitrofigilis DSM 7299]
 gi|296096020|gb|ADG91970.1| ribosomal protein L35 [Arcobacter nitrofigilis DSM 7299]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ S + KRF +   G ++  +A + H + K S K     RG   + S DA +V R
Sbjct: 1  MPKMKSVSGALKRFKVKKNGSIKCGSAFRSHILTKMSRKRKVALRGPQTIDSTDATRVRR 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|291523568|emb|CBK81861.1| LSU ribosomal protein L35P [Coprococcus catus GD/7]
          Length = 65

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TG+++   A K H + K+S K  RN R   +  S +A KV++
Sbjct: 1  MPKVKTSRAAAKRFKKTGTGQLKRMKAYKSHILTKKSAKRKRNLRHAAMTDSTNA-KVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|38233751|ref|NP_939518.1| 50S ribosomal protein L35 [Corynebacterium diphtheriae NCTC
          13129]
 gi|54036266|sp|Q6NHH6|RL35_CORDI RecName: Full=50S ribosomal protein L35
 gi|38200012|emb|CAE49681.1| 50S ribosomal protein L35 [Corynebacterium diphtheriae]
          Length = 64

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  IT +GK+R + A +RH +  + +K  R  +GT  +A AD K++ R  
Sbjct: 2  KQKTHKGTAKRVKITGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAKADTKRIKRLL 61


>gi|203284110|ref|YP_002221850.1| 50S ribosomal protein L35 [Borrelia duttonii Ly]
 gi|203287648|ref|YP_002222663.1| 50S ribosomal protein L35 [Borrelia recurrentis A1]
 gi|226713825|sp|B5RL15|RL35_BORDL RecName: Full=50S ribosomal protein L35
 gi|226713828|sp|B5RR08|RL35_BORRA RecName: Full=50S ribosomal protein L35
 gi|201083553|gb|ACH93144.1| 50S ribosomal protein L35 [Borrelia duttonii Ly]
 gi|201084868|gb|ACH94442.1| 50S ribosomal protein L35 [Borrelia recurrentis A1]
          Length = 65

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S++KR++ T+ GKV+ +    RH + K+S K  RN   + ++++ + K++ +
Sbjct: 1  MPKMKTCKSARKRYAFTSKGKVKYKKQNLRHILTKKSAKRKRNLGKSGLVSNVEVKRI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TLLPY 64


>gi|170078779|ref|YP_001735417.1| 50S ribosomal protein L35 [Synechococcus sp. PCC 7002]
 gi|226725075|sp|B1XIR0|RL35_SYNP2 RecName: Full=50S ribosomal protein L35
 gi|169886448|gb|ACB00162.1| ribosomal protein L35 [Synechococcus sp. PCC 7002]
          Length = 67

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF +T +G K+  + A K H +  +S +   R   G  ++  +D K V
Sbjct: 1  MPKLKTRRAAAKRFKLTGSGKKIARRKAFKNHLLNHKSAEQKRRRLSGMALVDKSDEKNV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|192361237|ref|YP_001982988.1| 50S ribosomal protein L35 [Cellvibrio japonicus Ueda107]
 gi|190687402|gb|ACE85080.1| ribosomal protein L35 [Cellvibrio japonicus Ueda107]
          Length = 65

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K K +S + KRF  T  G  + + A K H + K + K  R  RGT ++ +AD  +V R +
Sbjct: 4  KAKVHSGASKRFKKTGAG-FKFKHANKSHILTKMTTKRKRQLRGTSIVDAADVPRVQRMF 62


>gi|3738336|gb|AAC63677.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
 gi|20197496|gb|AAM15097.1| putative chloroplast ribosomal protein L35 [Arabidopsis thaliana]
          Length = 129

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
           KMKT+ +S KRF +T  GK+  + +GK+H + K++NK        +  +  +
Sbjct: 76  KMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMVHGSEPE 127


>gi|302871993|ref|YP_003840629.1| ribosomal protein L35 [Caldicellulosiruptor obsidiansis OB47]
 gi|302574852|gb|ADL42643.1| ribosomal protein L35 [Caldicellulosiruptor obsidiansis OB47]
          Length = 65

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR  ++ +GK   + AGK H +  ++ K  RN + T+V+ + + K V +
Sbjct: 1  MPKLKTHRGLAKRIKMSGSGKYLRKRAGKSHLLSGKTRKRKRNLKKTVVVDATNVKAVKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|290999971|ref|XP_002682553.1| predicted protein [Naegleria gruberi]
 gi|284096180|gb|EFC49809.1| predicted protein [Naegleria gruberi]
          Length = 111

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTM-VLASADAKKVIRNY 62
           +KT +S+KKRF IT +GK++ + AGKRH    ++ K +     T+ V+   D KK+ R  
Sbjct: 48  LKTKTSAKKRFRITGSGKIKRKQAGKRHHAWSKNRKRLNRLGKTVLVVCKGDKKKLKRFL 107


>gi|145298935|ref|YP_001141776.1| 50S ribosomal protein L35 [Aeromonas salmonicida subsp.
          salmonicida A449]
 gi|166231150|sp|A4SMA6|RL35_AERS4 RecName: Full=50S ribosomal protein L35
 gi|142851707|gb|ABO90028.1| ribosomal protein L35 [Aeromonas salmonicida subsp. salmonicida
          A449]
          Length = 65

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  T +G+ + +    RH + K+S+K  R      ++++AD K+V+ 
Sbjct: 1  MPKMKTNRGAAKRFKKTGSGRFKCKHNHLRHILTKKSSKRKRKLGPKFMVSAADHKRVVA 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 C-LPY 64


>gi|304415440|ref|ZP_07396089.1| 50S ribosomal subunit protein L35 [Candidatus Regiella
          insecticola LSR1]
 gi|304282704|gb|EFL91218.1| 50S ribosomal subunit protein L35 [Candidatus Regiella
          insecticola LSR1]
          Length = 67

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKT   + KRF  TA+G  + + A  RH + K+S K  R+ R   +++  D   V+
Sbjct: 5  KMKTVRGAAKRFKKTASGGFKRKHANLRHILTKKSTKRKRHLRPKGLISKNDLGLVV 61


>gi|157375259|ref|YP_001473859.1| 50S ribosomal protein L35 [Shewanella sediminis HAW-EB3]
 gi|189042789|sp|A8FV58|RL35_SHESH RecName: Full=50S ribosomal protein L35
 gi|157317633|gb|ABV36731.1| ribosomal protein L35 [Shewanella sediminis HAW-EB3]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+    KRF  TA G  + + A  RH + K+S K  R+ R    +A +D   + R
Sbjct: 1  MPKMKTDKGVAKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|304373306|ref|YP_003856515.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis HUB-1]
 gi|304309497|gb|ADM21977.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis HUB-1]
 gi|330723820|gb|AEC46190.1| 50S ribosomal protein L35 [Mycoplasma hyorhinis MCLD]
          Length = 62

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 37/59 (62%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT S+ KKR  +TA+GK++ + A + H    +S K  R +R   +++S+D K++ 
Sbjct: 1  MPKAKTKSALKKRIKVTASGKIKHKHAYRSHLAQNKSTKQKRQSRHATLMSSSDYKRIK 59


>gi|238922262|ref|YP_002935776.1| hypothetical protein EUBELI_20497 [Eubacterium eligens ATCC
          27750]
 gi|238873934|gb|ACR73642.1| Hypothetical protein EUBELI_20497 [Eubacterium eligens ATCC
          27750]
          Length = 65

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF +T TGK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKVKTKRAAAKRFKVTGTGKLKRMKAYKSHILTKKSTKRKRNLRQAAMTDATNVKTMKK 60

Query: 61 NY 62
            
Sbjct: 61 IM 62


>gi|297183099|gb|ADI19243.1| hypothetical protein [uncultured delta proteobacterium
          HF0200_14D13]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF +T  GK++ + A  RH M KRS    R  R    +   D   V R  
Sbjct: 2  KMKTHRGAAKRFRVTGGGKIKRKRAYLRHNMRKRSQDAKRVLRKKTYVTVEDMGLVER-L 60

Query: 63 LPN 65
          LPN
Sbjct: 61 LPN 63


>gi|83754089|pdb|2AW4|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli At 3.5 A Resolution. This File
          Contains The 50s Subunit Of One 70s Ribosome. The
          Entire Crystal Structure Contains Two 70s Ribosomes And
          Is Described In Remark 400.
 gi|83754145|pdb|2AWB|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli At 3.5 A Resolution. This File
          Contains The 50s Subunit Of The Second 70s Ribosome.
          The Entire Crystal Structure Contains Two 70s Ribosomes
          And Is Described In Remark 400.
 gi|118138120|pdb|2I2T|3 Chain 3, Crystal Structure Of Ribosome With Messenger Rna And The
          Anticodon Stem-Loop Of P-Site Trna. This File Contains
          The 50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|118138174|pdb|2I2V|3 Chain 3, Crystal Structure Of Ribosome With Messenger Rna And The
          Anticodon Stem-Loop Of P-Site Trna. This File Contains
          The 50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|119390340|pdb|2J28|3 Chain 3, Model Of E. Coli Srp Bound To 70s Rncs
 gi|157836057|pdb|2QOV|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Spectinomycin. This
          File Contains The 50s Subunit Of The First 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes.
 gi|157836109|pdb|2QOX|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Spectinomycin. This
          File Contains The 50s Subunit Of The Second 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes.
 gi|157836161|pdb|2QOZ|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Spectinomycin And
          Neomycin. This File Contains The 50s Subunit Of The
          First 70s Ribosome, With Neomycin Bound. The Entire
          Crystal Structure Contains Two 70s Ribosomes.
 gi|157836213|pdb|2QP1|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Spectinomycin And
          Neomycin. This File Contains The 50s Subunit Of The
          Second 70s Ribosome, With Neomycin Bound. The Entire
          Crystal Structure Contains Two 70s Ribosomes.
 gi|158429732|pdb|2QAM|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Neomycin. This File
          Contains The 50s Subunit Of The First 70s Ribosome,
          With Neomycin Bound. The Entire Crystal Structure
          Contains Two 70s Ribosomes And Is Described In Remark
          400.
 gi|158429784|pdb|2QAO|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Neomycin. This File
          Contains The 50s Subunit Of The Second 70s Ribosome,
          With Neomycin Bound. The Entire Crystal Structure
          Contains Two 70s Ribosomes And Is Described In Remark
          400.
 gi|158429842|pdb|2QBA|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Gentamicin. This File
          Contains The 50s Subunit Of The First 70s Ribosome,
          With Gentamicin Bound. The Entire Crystal Structure
          Contains Two 70s Ribosomes And Is Described In Remark
          400.
 gi|158429894|pdb|2QBC|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Gentamicin. This File
          Contains The 50s Subunit Of The Second 70s Ribosome,
          With Gentamicin Bound. The Entire Crystal Structure
          Contains Two 70s Ribosomes And Is Described In Remark
          400.
 gi|158429946|pdb|2QBE|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Ribosome Recycling
          Factor (Rrf). This File Contains The 50s Subunit Of The
          First 70s Ribosome, With Rrf Bound. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|158429999|pdb|2QBG|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Ribosome Recycling
          Factor (Rrf). This File Contains The 50s Subunit Of The
          Second 70s Ribosome, With Rrf Bound. The Entire Crystal
          Structure Contains Two 70s Ribosomes And Is Described
          In Remark 400.
 gi|158430052|pdb|2QBI|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Gentamicin And
          Ribosome Recycling Factor (Rrf). This File Contains The
          50s Subunit Of The First 70s Ribosome, With Gentamicin
          And Rrf Bound. The Entire Crystal Structure Contains
          Two 70s Ribosomes And Is Described In Remark 400.
 gi|158430105|pdb|2QBK|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Gentamicin And
          Ribosome Recycling Factor (Rrf). This File Contains The
          50s Subunit Of The Second 70s Ribosome, With Gentamicin
          And Rrf Bound. The Entire Crystal Structure Contains
          Two 70s Ribosomes And Is Described In Remark 400.
 gi|158431405|pdb|2Z4L|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Paromomycin And
          Ribosome Recycling Factor (Rrf). This File Contains The
          50s Subunit Of The First 70s Ribosome, With Paromomycin
          And Rrf Bound. The Entire Crystal Structure Contains
          Two 70s Ribosomes And Is Described In Remark 400.
 gi|158431458|pdb|2Z4N|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Paromomycin And
          Ribosome Recycling Factor (Rrf). This File Contains The
          50s Subunit Of The Second 70s Ribosome, With
          Paromomycin And Rrf Bound. The Entire Crystal Structure
          Contains Two 70s Ribosomes And Is Described In Remark
          400.
 gi|168988728|pdb|2VHM|3 Chain 3, Structure Of Pdf Binding Helix In Complex With The
          Ribosome (Part 1 Of 4)
 gi|168988760|pdb|2VHN|3 Chain 3, Structure Of Pdf Binding Helix In Complex With The
          Ribosome. (Part 2 Of 4)
 gi|169404629|pdb|2RDO|3 Chain 3, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
 gi|197107328|pdb|3DF2|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Hygromycin B. This
          File Contains The 50s Subunit Of The First 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes.
 gi|197107380|pdb|3DF4|3 Chain 3, Crystal Structure Of The Bacterial Ribosome From
          Escherichia Coli In Complex With Hygromycin B. This
          File Contains The 50s Subunit Of The Second 70s
          Ribosome. The Entire Crystal Structure Contains Two 70s
          Ribosomes.
 gi|209870381|pdb|3BBX|3 Chain 3, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em
          Map 50s.Nc-Trna.Hsp15 Complex
 gi|224510760|pdb|3FIK|3 Chain 3, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
          Consists Of The 50s Subunit.
 gi|256032395|pdb|3E1B|W Chain W, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-
          Accommodation State
 gi|256032452|pdb|3E1D|W Chain W, Structure Of The 50s Subunit Of E. Coli Ribosome In
          Post- Accommodation State
 gi|294662248|pdb|2WWQ|7 Chain 7, E.Coli 70s Ribosome Stalled During Translation Of Tnac
          Leader Peptide. This File Contains The 50s, The P-Site
          Trna And The Tnac Leader Peptide (Part 2 Of 2).
 gi|308388036|pdb|3OFQ|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Erythromycin. This File Contains The 50s Subunit Of The
          Second 70s Ribosome.
 gi|308388067|pdb|3OFR|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Erythromycin. This File Contains The 50s Subunit Of The
          First 70s Ribosome With Erthromycin Bound.
 gi|309320094|pdb|3OFC|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Chloramphenicol. This File Contains The 50s Subunit Of
          The First 70s Ribosome With Chloramphenicol Bound.
 gi|309320125|pdb|3OFD|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Chloramphenicol. This File Contains The 50s Subunit Of
          The Second 70s Ribosome.
 gi|309320198|pdb|3OFZ|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Clindamycin. This File Contains The 50s Subunit Of The
          First 70s Ribosome Bound To Clindamycin.
 gi|309320229|pdb|3OG0|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Clindamycin. This File Contains The 50s Subunit Of The
          Second 70s Ribosome.
 gi|315113683|pdb|3OAS|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Telithromycin. This File Contains The 50s Subunit Of
          The Second 70s Ribosome.
 gi|315113714|pdb|3OAT|3 Chain 3, Crystal Structure Of The E. Coli Ribosome Bound To
          Telithromycin. This File Contains The 50s Subunit Of
          The First 70s Ribosome With Telithromycin Bound.
 gi|329666045|pdb|3J01|3 Chain 3, Structure Of The Ribosome-Secye Complex In The Membrane
          Environment
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          PK+KT   + KRF  T  G  + + A  RH + K++ K  R+ R   +++  D   VI
Sbjct: 1  PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVI 58


>gi|310827808|ref|YP_003960165.1| ribosomal protein L35 [Eubacterium limosum KIST612]
 gi|308739542|gb|ADO37202.1| ribosomal protein L35 [Eubacterium limosum KIST612]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF +  +G ++   A K H + K+S K  RN R    L  +DAK V +
Sbjct: 1  MPKMKSHRGAAKRFKVKKSGVIKRAKAYKSHILNKKSQKRKRNLRKAGYLVPSDAKVVKK 60

Query: 61 NYL 63
            +
Sbjct: 61 MLM 63


>gi|168188010|ref|ZP_02622645.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
 gi|169294167|gb|EDS76300.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
          Length = 59

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KRF  T +GK++   A K H + K+S+K  RN R + +++ A  K + 
Sbjct: 1  MPKMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQEKVMK 59


>gi|59711824|ref|YP_204600.1| 50S ribosomal protein L35 [Vibrio fischeri ES114]
 gi|197334823|ref|YP_002156018.1| ribosomal protein L35 [Vibrio fischeri MJ11]
 gi|75507026|sp|Q5E5I4|RL35_VIBF1 RecName: Full=50S ribosomal protein L35
 gi|226725082|sp|B5FDV3|RL35_VIBFM RecName: Full=50S ribosomal protein L35
 gi|59479925|gb|AAW85712.1| 50S ribosomal subunit protein L35 [Vibrio fischeri ES114]
 gi|197316313|gb|ACH65760.1| ribosomal protein L35 [Vibrio fischeri MJ11]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNSLLPKCEVAAVAR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|93007125|ref|YP_581562.1| 50S ribosomal protein L35 [Psychrobacter cryohalolentis K5]
 gi|148887097|sp|Q1Q8C5|RL35_PSYCK RecName: Full=50S ribosomal protein L35
 gi|92394803|gb|ABE76078.1| LSU ribosomal protein L35P [Psychrobacter cryohalolentis K5]
          Length = 65

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT S + KRF  TA G  + + A K H + K+S K IR  RG  ++  +D   V R
Sbjct: 4  KMKTRSGAAKRFKKTANG-FKRKQAFKSHILTKKSPKRIRQLRGLKLVHKSDEAAVRR 60


>gi|323490463|ref|ZP_08095670.1| 50S ribosomal protein L35 [Planococcus donghaensis MPA1U2]
 gi|323395867|gb|EGA88706.1| 50S ribosomal protein L35 [Planococcus donghaensis MPA1U2]
          Length = 66

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++S + KRF  T TGKVR  ++   H    +S K  R  R   +++S D K++ 
Sbjct: 1  MPKMKSHSGASKRFKKTGTGKVRRHSSHTSHLFANKSTKQKRKLRKGKLVSSGDLKRIK 59


>gi|310640925|ref|YP_003945683.1| 50S ribosomal protein l35 [Paenibacillus polymyxa SC2]
 gi|309245875|gb|ADO55442.1| 50S ribosomal protein L35 [Paenibacillus polymyxa SC2]
          Length = 63

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+SS K RF IT TGKV    A + H +  +S +  R       +A  D +++ +   
Sbjct: 1  MKTHSSLKGRFKITGTGKVTRYKAYRNHLLSHKSKRAKRVLGTNPEMAPGDVRRLKQGLA 60


>gi|297621145|ref|YP_003709282.1| 50S ribosomal protein L35 [Waddlia chondrophila WSU 86-1044]
 gi|297376446|gb|ADI38276.1| 50S ribosomal protein L35 [Waddlia chondrophila WSU 86-1044]
          Length = 65

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  +   RF +T  GK+  Q  G RH M K++ K  R      +++ +  K   R
Sbjct: 1  MPKLKTKKAVAARFKLTGKGKLLRQRPGLRHIMTKKTPKRKRQLAKPALVSDSQLKTYKR 60

Query: 61 NY 62
            
Sbjct: 61 LM 62


>gi|161511507|ref|NP_853140.2| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(low)]
 gi|118573013|sp|Q7NBC1|RL35_MYCGA RecName: Full=50S ribosomal protein L35
 gi|284812052|gb|AAP56708.2| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(low)]
 gi|284930622|gb|ADC30561.1| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. R(high)]
 gi|284931467|gb|ADC31405.1| 50S ribosomal protein L35 [Mycoplasma gallisepticum str. F]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT S++ KRF  T +GK++ + A   H    ++ K  R+ R   ++   D K++ 
Sbjct: 1  MPKMKTKSAAAKRFKTTKSGKIKRKQAYTSHLAPNKTTKQKRHLRKDGLVHKTDFKRIK 59


>gi|194335335|ref|YP_002017129.1| ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226725043|sp|B4SB91|RL35_PELPB RecName: Full=50S ribosomal protein L35
 gi|194307812|gb|ACF42512.1| ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  T++GK++ +     H + K+++K  R    T +L    AK++ R
Sbjct: 1  MPKMKSHRGACKRFKTTSSGKIKRERMNGSHNLEKKNSKRCRRLHQTALLEGLKAKQIKR 60


>gi|323341712|ref|ZP_08081945.1| 50S ribosomal protein L35 [Erysipelothrix rhusiopathiae ATCC
          19414]
 gi|322464137|gb|EFY09330.1| 50S ribosomal protein L35 [Erysipelothrix rhusiopathiae ATCC
          19414]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  +  KR   T +G+++ Q A   H    ++NK  R  R   +++ +D K++ 
Sbjct: 1  MPKMKTKRTLAKRVKRTGSGQLKRQQAYVSHFARHKTNKQNRQLRKATLVSKSDYKRIK 59


>gi|218296412|ref|ZP_03497155.1| ribosomal protein L35 [Thermus aquaticus Y51MC23]
 gi|218243206|gb|EED09737.1| ribosomal protein L35 [Thermus aquaticus Y51MC23]
          Length = 64

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +KKR  +TA+GKV A   GKRH    +S K IR       LA  +A+++ R
Sbjct: 1  MGKMKTHKGAKKRVKVTASGKVVAMKTGKRHLNWHKSGKTIRQKGRKFTLAKPEAERIKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|218134266|ref|ZP_03463070.1| hypothetical protein BACPEC_02159 [Bacteroides pectinophilus ATCC
          43243]
 gi|217991641|gb|EEC57647.1| hypothetical protein BACPEC_02159 [Bacteroides pectinophilus ATCC
          43243]
          Length = 65

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T TG+++   A K H + K++ K  RN R + +  + + K  ++
Sbjct: 1  MPKVKTKRAAAKRFKKTGTGELKRMKAYKSHILTKKTTKRKRNLRHSTLTDATNVK-TMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|159027583|emb|CAO86955.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 67

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGK-VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT  ++ KRF  T +GK ++ + A K H +  +S +  R     + L     +K +
Sbjct: 1  MPKLKTRKAAAKRFEATGSGKKIKRRKAFKNHLLDHKSAERKRRRLSQITLVDERDEKEV 60

Query: 60 RNYLPN 65
          R  LP 
Sbjct: 61 RLMLPY 66


>gi|270308066|ref|YP_003330124.1| ribosomal protein L35 [Dehalococcoides sp. VS]
 gi|270153958|gb|ACZ61796.1| ribosomal protein L35 [Dehalococcoides sp. VS]
          Length = 67

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF +T TGK+      K H    +S +  R       +A  D  ++ +
Sbjct: 1  MPKMKTRKTAVKRFHVTGTGKIMRSKGMKSHLRRNKSARVRRQFDEMSQVAGVDRARIQK 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LIPYGV 66


>gi|238924312|ref|YP_002937828.1| hypothetical protein EUBREC_1952 [Eubacterium rectale ATCC 33656]
 gi|259647354|sp|C4ZBG2|RL35_EUBR3 RecName: Full=50S ribosomal protein L35
 gi|238875987|gb|ACR75694.1| Hypothetical protein EUBREC_1952 [Eubacterium rectale ATCC 33656]
 gi|291525082|emb|CBK90669.1| LSU ribosomal protein L35P [Eubacterium rectale DSM 17629]
 gi|291529177|emb|CBK94763.1| LSU ribosomal protein L35P [Eubacterium rectale M104/1]
          Length = 65

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF +T TGK++   A KRH + K++ K  RN R   +    + K  ++
Sbjct: 1  MPKMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKTKRNLRKATMTDETNVKN-MK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|119026093|ref|YP_909938.1| 50S ribosomal protein L35 [Bifidobacterium adolescentis ATCC
          15703]
 gi|154488866|ref|ZP_02029715.1| hypothetical protein BIFADO_02174 [Bifidobacterium adolescentis
          L2-32]
 gi|166231158|sp|A1A2C3|RL35_BIFAA RecName: Full=50S ribosomal protein L35
 gi|118765677|dbj|BAF39856.1| 50S ribosomal protein L35 [Bifidobacterium adolescentis ATCC
          15703]
 gi|154083003|gb|EDN82048.1| hypothetical protein BIFADO_02174 [Bifidobacterium adolescentis
          L2-32]
          Length = 64

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA++ +K + +
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRELKADGVLATSQSKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|294155484|ref|YP_003559868.1| 50S ribosomal protein L35 [Mycoplasma crocodyli MP145]
 gi|291600508|gb|ADE20004.1| 50S ribosomal protein L35 [Mycoplasma crocodyli MP145]
          Length = 62

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S+ KKR  IT TGKV  + A + H    ++ K  R +R ++ ++ +D K+   
Sbjct: 1  MPKMKTKSALKKRIKITGTGKVMREQAFRSHLAQNKTTKQKRQSRKSVQMSKSDIKRFKA 60

Query: 61 NY 62
           +
Sbjct: 61 LF 62


>gi|299830574|ref|YP_003735022.1| 50S ribosomal protein L35 [Durinskia baltica]
 gi|297384938|gb|ADI40237.1| 50S ribosomal protein L35 [Durinskia baltica]
          Length = 64

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+ IT       + A K H ++ +SNK  R     + +  +D K + +
Sbjct: 1  MPKLKTRKAAAKRYKITGNDNFLRRHAFKGHLLMHKSNKQKRKLSQVLCVKKSDVKAI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|157962082|ref|YP_001502116.1| 50S ribosomal protein L35 [Shewanella pealeana ATCC 700345]
 gi|167623948|ref|YP_001674242.1| 50S ribosomal protein L35 [Shewanella halifaxensis HAW-EB4]
 gi|189042787|sp|B0TT22|RL35_SHEHH RecName: Full=50S ribosomal protein L35
 gi|189042788|sp|A8H4U4|RL35_SHEPA RecName: Full=50S ribosomal protein L35
 gi|157847082|gb|ABV87581.1| ribosomal protein L35 [Shewanella pealeana ATCC 700345]
 gi|167353970|gb|ABZ76583.1| ribosomal protein L35 [Shewanella halifaxensis HAW-EB4]
          Length = 64

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+   +KRF  TA G  + + A  RH + K+S K  R+ R    +A +D   + R
Sbjct: 1  MPKMKTDKGVQKRFKKTANG-FKRKQAHLRHILTKKSTKRKRHLRAKCQVAKSDVPAIAR 59

Query: 61 NY 62
            
Sbjct: 60 QL 61


>gi|269925883|ref|YP_003322506.1| ribosomal protein L35 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789543|gb|ACZ41684.1| ribosomal protein L35 [Thermobaculum terrenum ATCC BAA-798]
          Length = 66

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+K+RF IT TGK+      K H   K+S +  ++      ++ AD K++ R
Sbjct: 1  MPKLKTNKSAKRRFKITGTGKILRTKGMKSHLRRKKSTRAKQDFDRMFEVSPADRKRLRR 60

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 61 A-LPYGV 66


>gi|193216576|ref|YP_001999818.1| 50S ribosomal protein L35 [Mycoplasma arthritidis 158L3-1]
 gi|226725035|sp|B3PM62|RL35_MYCA5 RecName: Full=50S ribosomal protein L35
 gi|193001899|gb|ACF07114.1| ribosomal protein L35 [Mycoplasma arthritidis 158L3-1]
          Length = 62

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/57 (43%), Positives = 34/57 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPKMKT S  KKR  ITATGKV+   A + H    ++ K  R +R +  L+ +D K+
Sbjct: 1  MPKMKTKSGLKKRIKITATGKVKRGNAYRSHLAQNKTTKQKRQSRKSSQLSHSDFKR 57


>gi|118573016|sp|Q2GEI7|RL35_NEOSM RecName: Full=50S ribosomal protein L35
          Length = 66

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G  +++ +   +++R
Sbjct: 1  MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGYTLISKS-KMRLMR 59

Query: 61 NYLPN 65
          + +P 
Sbjct: 60 SVMPY 64


>gi|86158397|ref|YP_465182.1| 50S ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|148887060|sp|Q2IJB9|RL35_ANADE RecName: Full=50S ribosomal protein L35
 gi|85774908|gb|ABC81745.1| LSU ribosomal protein L35P [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 67

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI-KRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  LA  D KK+ 
Sbjct: 1  MPKLKTKSGAKKRFVPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLAPMDEKKIK 60

Query: 60 RNY 62
            +
Sbjct: 61 ECF 63


>gi|19552596|ref|NP_600598.1| 50S ribosomal protein L35 [Corynebacterium glutamicum ATCC 13032]
 gi|62390264|ref|YP_225666.1| 50S ribosomal protein L35 [Corynebacterium glutamicum ATCC 13032]
 gi|145295515|ref|YP_001138336.1| 50S ribosomal protein L35 [Corynebacterium glutamicum R]
 gi|23822053|sp|Q8NQP7|RL35_CORGL RecName: Full=50S ribosomal protein L35
 gi|166231181|sp|A4QDY2|RL35_CORGB RecName: Full=50S ribosomal protein L35
 gi|21324147|dbj|BAB98772.1| Ribosomal protein L35 [Corynebacterium glutamicum ATCC 13032]
 gi|41325601|emb|CAF21390.1| 50S RIBOSOMAL PROTEIN L35 [Corynebacterium glutamicum ATCC 13032]
 gi|140845435|dbj|BAF54434.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 64

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 33/60 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+  + A +RH +  +S+   R  +G + +  AD K++ R  
Sbjct: 2  KNKTHKGTAKRVKVTGSGKLVREQANRRHLLEGKSSTRTRRLKGIVEVDKADTKRMKRLL 61


>gi|78186011|ref|YP_374054.1| 50S ribosomal protein L35 [Chlorobium luteolum DSM 273]
 gi|148887090|sp|Q3B6M0|RL35_PELLD RecName: Full=50S ribosomal protein L35
 gi|78165913|gb|ABB23011.1| LSU ribosomal protein L35P [Chlorobium luteolum DSM 273]
          Length = 65

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+GK++ +     H + K++ K  R    + +L +A  +K I+
Sbjct: 1  MPKMKSHRGACKRFKATASGKIKRERMNGSHNLEKKNRKRTRRLHQSTMLDNATKEKQIK 60

Query: 61 NYL 63
            +
Sbjct: 61 RMI 63


>gi|259046987|ref|ZP_05737388.1| 50S ribosomal protein L35 [Granulicatella adiacens ATCC 49175]
 gi|260584103|ref|ZP_05851851.1| 50S ribosomal protein L35 [Granulicatella elegans ATCC 700633]
 gi|259036430|gb|EEW37685.1| 50S ribosomal protein L35 [Granulicatella adiacens ATCC 49175]
 gi|260158729|gb|EEW93797.1| 50S ribosomal protein L35 [Granulicatella elegans ATCC 700633]
          Length = 66

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T  G ++   A   H    ++ K  R+ R   ++ + D K++ +
Sbjct: 1  MPKQKTHRGSAKRFKRTGGGGLKRSQAFTSHRFHGKTKKQRRHLRKQTMVHATDIKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|153004743|ref|YP_001379068.1| 50S ribosomal protein L35 [Anaeromyxobacter sp. Fw109-5]
 gi|166231151|sp|A7HBI8|RL35_ANADF RecName: Full=50S ribosomal protein L35
 gi|152028316|gb|ABS26084.1| ribosomal protein L35 [Anaeromyxobacter sp. Fw109-5]
          Length = 67

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI-KRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  LA  DAKK+ 
Sbjct: 1  MPKLKTKSGAKKRFIPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLAPMDAKKIK 60

Query: 60 RNY 62
            +
Sbjct: 61 ECF 63


>gi|78357679|ref|YP_389128.1| 50S ribosomal protein L35 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
 gi|148840422|sp|Q30Y13|RL35_DESDG RecName: Full=50S ribosomal protein L35
 gi|78220084|gb|ABB39433.1| LSU ribosomal protein L35P [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
          Length = 65

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KRFS+T +GK + +    RH + K+++K         ++   + K V R
Sbjct: 1  MPKIKTRRCAAKRFSVTGSGKFKRRRKNMRHILTKKASKRKMQLGQPALVDKTNEKAVKR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -MLPY 64


>gi|289550564|ref|YP_003471468.1| LSU ribosomal protein L35p [Staphylococcus lugdunensis HKU09-01]
 gi|315658058|ref|ZP_07910931.1| 50S ribosomal protein L35 [Staphylococcus lugdunensis M23590]
 gi|289180096|gb|ADC87341.1| LSU ribosomal protein L35p [Staphylococcus lugdunensis HKU09-01]
 gi|315496948|gb|EFU85270.1| 50S ribosomal protein L35 [Staphylococcus lugdunensis M23590]
          Length = 66

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +G+++   A   H    ++ K  R+ R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRHLRKARLVSKSDLKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|91201674|emb|CAJ74734.1| strongly similar to 50S ribosomal protein L35 [Candidatus
          Kuenenia stuttgartiensis]
          Length = 65

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +   KKR  ITA GKV    AGK H M  +S +  +  R  + ++   +K + R
Sbjct: 1  MPKLKPHKGLKKRVKITANGKVMRSKAGKSHLMSGKSGRRKQRLRKKIEVSPGFSKNIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 AML 63


>gi|308272687|emb|CBX29291.1| 50S ribosomal protein L35 [uncultured Desulfobacterium sp.]
          Length = 65

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN  + KRF  T +GK     +   H + K++ K  R+ R   ++   + ++ +R
Sbjct: 1  MPKIKTNRGAAKRFRKTGSGKFAYAKSHASHILTKKTTKRKRSLRKKHIIDKTN-QRELR 59

Query: 61 NYLPN 65
            LPN
Sbjct: 60 LLLPN 64


>gi|300858363|ref|YP_003783346.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          FRC41]
 gi|300685817|gb|ADK28739.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          FRC41]
 gi|302206078|gb|ADL10420.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          C231]
 gi|302330631|gb|ADL20825.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          1002]
 gi|308276316|gb|ADO26215.1| 50S ribosomal protein L35 [Corynebacterium pseudotuberculosis
          I19]
          Length = 64

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  ++ AD K+V R  
Sbjct: 2  KQKTHKGTAKRVKVTGSGKLRRERANRRHLLEGKPSTRTRRLKGTEDVSKADTKRVKRLL 61


>gi|154500001|ref|ZP_02038039.1| hypothetical protein BACCAP_03658 [Bacteroides capillosus ATCC
          29799]
 gi|150271599|gb|EDM98856.1| hypothetical protein BACCAP_03658 [Bacteroides capillosus ATCC
          29799]
          Length = 67

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI--KRSNKFIRNARGTMVLASADAKKV 58
          MPK+KT+S +KKRF++T +GKV+   A K H +    +  K  R  R        +   +
Sbjct: 1  MPKLKTHSGAKKRFNLTKSGKVKRAHAFKSHLLNGHGKDTKRKRGLRAGAYADKTNESAI 60

Query: 59 IRNYLPN 65
           R  +P 
Sbjct: 61 KR-MIPY 66


>gi|149072052|ref|YP_001293564.1| ribosomal protein L35 [Rhodomonas salina]
 gi|134303003|gb|ABO70807.1| ribosomal protein L35 [Rhodomonas salina]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S  KRF  T  GK   + A K H + K+S K  RN     V++  ++  V+R
Sbjct: 1  MPKLKTRKSVLKRFKKTVNGKFIRRKACKGHLLEKKSAKRKRNLSQKAVVSFGESL-VLR 59

Query: 61 NYLPN 65
          + LP 
Sbjct: 60 SLLPY 64


>gi|116491273|ref|YP_810817.1| 50S ribosomal protein L35P [Oenococcus oeni PSU-1]
 gi|118586726|ref|ZP_01544163.1| ribosomal protein L35 [Oenococcus oeni ATCC BAA-1163]
 gi|290890820|ref|ZP_06553887.1| hypothetical protein AWRIB429_1277 [Oenococcus oeni AWRIB429]
 gi|122276545|sp|Q04EH0|RL35_OENOB RecName: Full=50S ribosomal protein L35
 gi|116091998|gb|ABJ57152.1| LSU ribosomal protein L35P [Oenococcus oeni PSU-1]
 gi|118432814|gb|EAV39543.1| ribosomal protein L35 [Oenococcus oeni ATCC BAA-1163]
 gi|290479592|gb|EFD88249.1| hypothetical protein AWRIB429_1277 [Oenococcus oeni AWRIB429]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN +S KRF  TA+G  +A  A   H    ++ K  R  RGT ++   + K+  +
Sbjct: 1  MPKMKTNRASAKRFKKTASGGFKAGQAFTSHRFHGKTKKQRRQLRGTAMMNKVNVKRYAK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|116492468|ref|YP_804203.1| 50S ribosomal protein L35 [Pediococcus pentosaceus ATCC 25745]
 gi|122266068|sp|Q03GB1|RL35_PEDPA RecName: Full=50S ribosomal protein L35
 gi|116102618|gb|ABJ67761.1| LSU ribosomal protein L35P [Pediococcus pentosaceus ATCC 25745]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++ S + K+  +
Sbjct: 1  MPKMKTNRAAAKRFKKTANGGLKSANAYTSHRFHGKTKKQRRQLRGTDMMDSTNVKRYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
 gi|310287137|ref|YP_003938395.1| rpmI LSU ribosomal protein L35P [Bifidobacterium bifidum S17]
 gi|311064000|ref|YP_003970725.1| 50S ribosomal protein L35P RpmI [Bifidobacterium bifidum PRL2010]
 gi|313139836|ref|ZP_07802029.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251073|gb|ADO52821.1| rpmI LSU ribosomal protein L35P [Bifidobacterium bifidum S17]
 gi|310866319|gb|ADP35688.1| RpmI LSU ribosomal protein L35P [Bifidobacterium bifidum PRL2010]
 gi|313132346|gb|EFR49963.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171]
          Length = 64

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA+A +K + +
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATAQSKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|298206755|ref|YP_003714934.1| ribosomal protein L35 [Croceibacter atlanticus HTCC2559]
 gi|83849386|gb|EAP87254.1| ribosomal protein L35 [Croceibacter atlanticus HTCC2559]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT SS+KKRF +TA+GK++ + A K H + K++ K       + ++  AD   V 
Sbjct: 1  MPKQKTKSSAKKRFKLTASGKIKRKHAFKSHILTKKTKKQKLALTHSTLVHKADEPNVK 59


>gi|148377739|ref|YP_001256615.1| 50S ribosomal protein L35 [Mycoplasma agalactiae PG2]
 gi|291320424|ref|YP_003515687.1| 50S ribosomal protein L35 [Mycoplasma agalactiae]
 gi|226725037|sp|A5IYR5|RL35_MYCAP RecName: Full=50S ribosomal protein L35
 gi|148291785|emb|CAL59174.1| 50S ribosomal protein L35 [Mycoplasma agalactiae PG2]
 gi|290752758|emb|CBH40733.1| 50S ribosomal protein L35 [Mycoplasma agalactiae]
          Length = 62

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT S+ KKR  +TATGKV  + A + H    ++ K  R +R +  + S+D K+  
Sbjct: 1  MPKMKTKSALKKRIKVTATGKVIREQAYRSHLAQNKTTKQKRQSRKSAQMHSSDLKRFK 59


>gi|68171434|ref|ZP_00544824.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999154|gb|EAM85814.1| ribosomal protein L35 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 55

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 41/54 (75%), Gaps = 1/54 (1%)

Query: 12 KRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
          KRFS+TATGK+++  + KRHGM KRS + IR  RGT ++ S+D+ ++++ ++P 
Sbjct: 1  KRFSVTATGKIKSTQSAKRHGMTKRSKRSIRVQRGTAIMNSSDS-RIVKLFMPY 53


>gi|189499156|ref|YP_001958626.1| 50S ribosomal protein L35 [Chlorobium phaeobacteroides BS1]
 gi|226724981|sp|B3EKG7|RL35_CHLPB RecName: Full=50S ribosomal protein L35
 gi|189494597|gb|ACE03145.1| ribosomal protein L35 [Chlorobium phaeobacteroides BS1]
          Length = 64

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+G+V+ +     H + K++ K  R    + ++     K++ R
Sbjct: 1  MPKMKSHRGACKRFKKTASGRVKREKMYGSHNLEKKNRKRTRRIHQSTLVDKTQEKQIKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MIL 63


>gi|320102029|ref|YP_004177620.1| 50S ribosomal protein L35 [Isosphaera pallida ATCC 43644]
 gi|319749311|gb|ADV61071.1| ribosomal protein L35 [Isosphaera pallida ATCC 43644]
          Length = 92

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 1  MP--KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MP  K KT+   KKRF +T TGKV  +  G  H    +S K IR  R   V+      + 
Sbjct: 1  MPSIKAKTHKGIKKRFKVTGTGKVIHKRCGSSHLNSHKSGKKIRQLRRKSVITVNAVAQK 60

Query: 59 IRNYL 63
          +R +L
Sbjct: 61 LRRHL 65


>gi|239637523|ref|ZP_04678495.1| ribosomal protein L35 [Staphylococcus warneri L37603]
 gi|239596741|gb|EEQ79266.1| ribosomal protein L35 [Staphylococcus warneri L37603]
 gi|330685704|gb|EGG97343.1| ribosomal protein L35 [Staphylococcus epidermidis VCU121]
          Length = 66

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +G+++   A   H    ++ K  R  R + +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRQLRKSRLVSKSDMKRVKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|90994462|ref|YP_536952.1| ribosomal protein L35 [Porphyra yezoensis]
 gi|125988418|sp|Q1XDL6|RK35_PORYE RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|90819026|dbj|BAE92395.1| 50S ribosomal protein L35 [Porphyra yezoensis]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ +  KRF ++++GK     A K H + K+S+K  R+   T  +   D K +  
Sbjct: 1  MPKLKTSKAIAKRFKVSSSGKFLRHKASKSHLLQKKSSKQRRHLSSTCSVDLKDIKNIAM 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 Q-LPY 64


>gi|332967752|gb|EGK06858.1| 50S ribosomal protein L35 [Desmospora sp. 8437]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  ++ KRF+ T TGKV+   A   H +  +     R  R +  ++ +D K++ 
Sbjct: 1  MPKMKTRRAAAKRFNKTGTGKVKRNHAYMNHMLEHKPKSAKRKLRKSTTMSKSDVKRIK 59


>gi|145219004|ref|YP_001129713.1| 50S ribosomal protein L35 [Prosthecochloris vibrioformis DSM 265]
 gi|189042779|sp|A4SCK2|RL35_PROVI RecName: Full=50S ribosomal protein L35
 gi|145205168|gb|ABP36211.1| LSU ribosomal protein L35P [Chlorobium phaeovibrioides DSM 265]
          Length = 65

 Score = 55.1 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF  TA+G+++ +     H +  ++ K  R    + +L     ++ I+
Sbjct: 1  MPKMKSHRGACKRFKATASGRIKRERMNGSHNLEHKNRKRTRRLHQSALLECTKKERQIK 60

Query: 61 NYL 63
            +
Sbjct: 61 RMI 63


>gi|289548237|ref|YP_003473225.1| ribosomal protein L35 [Thermocrinis albus DSM 14484]
 gi|289181854|gb|ADC89098.1| ribosomal protein L35 [Thermocrinis albus DSM 14484]
          Length = 67

 Score = 55.1 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 32/57 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKTN S+KKRF +TATGK++   AG  H   K+S    R  R   ++  +   KV 
Sbjct: 5  KMKTNRSAKKRFKVTATGKIKRWKAGGSHYNTKKSKDRKRRLRKATLVNPSWEDKVR 61


>gi|225028458|ref|ZP_03717650.1| hypothetical protein EUBHAL_02732 [Eubacterium hallii DSM 3353]
 gi|224954208|gb|EEG35417.1| hypothetical protein EUBHAL_02732 [Eubacterium hallii DSM 3353]
          Length = 65

 Score = 55.1 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ ++ KRF  T +GK++   A K H + K+S K  RN R   +  + + K + +
Sbjct: 1  MPKMKTSRAAAKRFKKTGSGKLKRNKAYKSHILTKKSQKRKRNLRKAAMTDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|15594534|ref|NP_212323.1| 50S ribosomal protein L35 [Borrelia burgdorferi B31]
 gi|195941920|ref|ZP_03087302.1| 50S ribosomal protein L35 [Borrelia burgdorferi 80a]
 gi|216264178|ref|ZP_03436170.1| ribosomal protein L35 [Borrelia burgdorferi 156a]
 gi|218249393|ref|YP_002374717.1| ribosomal protein L35 [Borrelia burgdorferi ZS7]
 gi|221217525|ref|ZP_03588995.1| ribosomal protein L35 [Borrelia burgdorferi 72a]
 gi|223889274|ref|ZP_03623862.1| ribosomal protein L35 [Borrelia burgdorferi 64b]
 gi|224532833|ref|ZP_03673448.1| ribosomal protein L35 [Borrelia burgdorferi WI91-23]
 gi|224534069|ref|ZP_03674652.1| ribosomal protein L35 [Borrelia burgdorferi CA-11.2a]
 gi|225548517|ref|ZP_03769565.1| ribosomal protein L35 [Borrelia burgdorferi 94a]
 gi|225549787|ref|ZP_03770751.1| ribosomal protein L35 [Borrelia burgdorferi 118a]
 gi|226321507|ref|ZP_03797033.1| ribosomal protein L35 [Borrelia burgdorferi Bol26]
 gi|6094061|sp|O51207|RL35_BORBU RecName: Full=50S ribosomal protein L35
 gi|226713824|sp|B7J1C2|RL35_BORBZ RecName: Full=50S ribosomal protein L35
 gi|2688075|gb|AAC66572.1| ribosomal protein L35 (rpmI) [Borrelia burgdorferi B31]
 gi|215980651|gb|EEC21458.1| ribosomal protein L35 [Borrelia burgdorferi 156a]
 gi|218164581|gb|ACK74642.1| ribosomal protein L35 [Borrelia burgdorferi ZS7]
 gi|221192588|gb|EEE18805.1| ribosomal protein L35 [Borrelia burgdorferi 72a]
 gi|223885307|gb|EEF56409.1| ribosomal protein L35 [Borrelia burgdorferi 64b]
 gi|224512222|gb|EEF82608.1| ribosomal protein L35 [Borrelia burgdorferi WI91-23]
 gi|224512768|gb|EEF83136.1| ribosomal protein L35 [Borrelia burgdorferi CA-11.2a]
 gi|225369595|gb|EEG99044.1| ribosomal protein L35 [Borrelia burgdorferi 118a]
 gi|225370780|gb|EEH00215.1| ribosomal protein L35 [Borrelia burgdorferi 94a]
 gi|226232696|gb|EEH31449.1| ribosomal protein L35 [Borrelia burgdorferi Bol26]
 gi|312148490|gb|ADQ31149.1| ribosomal protein L35 [Borrelia burgdorferi JD1]
          Length = 66

 Score = 55.1 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|149183045|ref|ZP_01861498.1| 50S ribosomal protein L35 [Bacillus sp. SG-1]
 gi|148849226|gb|EDL63423.1| 50S ribosomal protein L35 [Bacillus sp. SG-1]
          Length = 62

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MKT+  S KRF  T +GK++   A   H    +S K  R  R   V++  D K++ 
Sbjct: 1  MKTHRGSAKRFKKTGSGKLKRSHAYTSHLFANKSTKQKRKLRKGAVVSKGDFKRIR 56


>gi|171742546|ref|ZP_02918353.1| hypothetical protein BIFDEN_01659 [Bifidobacterium dentium ATCC
          27678]
 gi|283456368|ref|YP_003360932.1| 50S ribosomal protein [Bifidobacterium dentium Bd1]
 gi|306822459|ref|ZP_07455837.1| 50S ribosomal protein L35 [Bifidobacterium dentium ATCC 27679]
 gi|309801432|ref|ZP_07695559.1| ribosomal protein L35 [Bifidobacterium dentium JCVIHMP022]
 gi|171278160|gb|EDT45821.1| hypothetical protein BIFDEN_01659 [Bifidobacterium dentium ATCC
          27678]
 gi|283103002|gb|ADB10108.1| rpmI LSU ribosomal protein [Bifidobacterium dentium Bd1]
 gi|304554004|gb|EFM41913.1| 50S ribosomal protein L35 [Bifidobacterium dentium ATCC 27679]
 gi|308221947|gb|EFO78232.1| ribosomal protein L35 [Bifidobacterium dentium JCVIHMP022]
          Length = 64

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLAS+  K + +
Sbjct: 1  MPKMKTNSAASKRIRVTGSGKLMHAGSAMRHNLEHKSARKRRELKADGVLASSQNKGMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|313678438|ref|YP_004056178.1| 50S ribosomal protein L35 [Mycoplasma bovis PG45]
 gi|312950667|gb|ADR25262.1| ribosomal protein L35 [Mycoplasma bovis PG45]
          Length = 62

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT S+ KKR  +TATGKV  + A + H    ++ K  R +R +  + S+D K+  
Sbjct: 1  MPKMKTKSALKKRIKVTATGKVMREQAYRSHLAQNKTTKQKRQSRKSAQMHSSDLKRFK 59


>gi|15924669|ref|NP_372203.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Mu50]
 gi|15927258|ref|NP_374791.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          N315]
 gi|21283352|ref|NP_646440.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MW2]
 gi|49483922|ref|YP_041146.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MRSA252]
 gi|49486506|ref|YP_043727.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MSSA476]
 gi|57650551|ref|YP_186564.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          COL]
 gi|82751268|ref|YP_417009.1| 50S ribosomal protein L35 [Staphylococcus aureus RF122]
 gi|87161342|ref|YP_494321.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          USA300_FPR3757]
 gi|88195486|ref|YP_500290.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          NCTC 8325]
 gi|148268160|ref|YP_001247103.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          JH9]
 gi|150394227|ref|YP_001316902.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          JH1]
 gi|151221785|ref|YP_001332607.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          str. Newman]
 gi|156979997|ref|YP_001442256.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Mu3]
 gi|221142570|ref|ZP_03567063.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          str. JKD6009]
 gi|253317177|ref|ZP_04840390.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          str. CF-Marseille]
 gi|253732331|ref|ZP_04866496.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          USA300_TCH959]
 gi|253734536|ref|ZP_04868701.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TCH130]
 gi|255006464|ref|ZP_05145065.2| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Mu50-omega]
 gi|257425795|ref|ZP_05602219.1| LSU ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          55/2053]
 gi|257428461|ref|ZP_05604859.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          65-1322]
 gi|257431095|ref|ZP_05607472.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          68-397]
 gi|257433778|ref|ZP_05610136.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          E1410]
 gi|257436694|ref|ZP_05612738.1| LSU ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          M876]
 gi|257794065|ref|ZP_05643044.1| 50S ribosomal protein L35 [Staphylococcus aureus A9781]
 gi|258415769|ref|ZP_05682040.1| 50S ribosomal protein L35 [Staphylococcus aureus A9763]
 gi|258421994|ref|ZP_05684914.1| LSU ribosomal protein L35 [Staphylococcus aureus A9719]
 gi|258424096|ref|ZP_05686978.1| LSU ribosomal protein L35 [Staphylococcus aureus A9635]
 gi|258438248|ref|ZP_05689532.1| ribosomal protein L35 [Staphylococcus aureus A9299]
 gi|258443706|ref|ZP_05692045.1| ribosomal protein L35 [Staphylococcus aureus A8115]
 gi|258445917|ref|ZP_05694093.1| 50S ribosomal protein L35 [Staphylococcus aureus A6300]
 gi|258448402|ref|ZP_05696519.1| 50S ribosomal protein L35 [Staphylococcus aureus A6224]
 gi|258451806|ref|ZP_05699828.1| 50S ribosomal protein L35 [Staphylococcus aureus A5948]
 gi|258454294|ref|ZP_05702263.1| ribosomal protein L35 [Staphylococcus aureus A5937]
 gi|262048654|ref|ZP_06021537.1| 50S ribosomal protein L35 [Staphylococcus aureus D30]
 gi|262052251|ref|ZP_06024456.1| 50S ribosomal protein L35 [Staphylococcus aureus 930918-3]
 gi|269203298|ref|YP_003282567.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ED98]
 gi|282893175|ref|ZP_06301409.1| 50S ribosomal protein L35 [Staphylococcus aureus A8117]
 gi|282904251|ref|ZP_06312139.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus C160]
 gi|282906076|ref|ZP_06313931.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Btn1260]
 gi|282908991|ref|ZP_06316809.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          WW2703/97]
 gi|282911307|ref|ZP_06319109.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          WBG10049]
 gi|282914476|ref|ZP_06322262.1| conserved domain protein [Staphylococcus aureus subsp. aureus
          M899]
 gi|282916939|ref|ZP_06324697.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          D139]
 gi|282919445|ref|ZP_06327180.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          C427]
 gi|282920220|ref|ZP_06327945.1| 50S ribosomal protein L35 [Staphylococcus aureus A9765]
 gi|282924822|ref|ZP_06332488.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          C101]
 gi|282927810|ref|ZP_06335421.1| 50S ribosomal protein L35 [Staphylococcus aureus A10102]
 gi|283770744|ref|ZP_06343636.1| large subunit ribosomal protein L35 [Staphylococcus aureus subsp.
          aureus H19]
 gi|283958431|ref|ZP_06375882.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          A017934/97]
 gi|284024728|ref|ZP_06379126.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          132]
 gi|293503554|ref|ZP_06667401.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          58-424]
 gi|293510569|ref|ZP_06669274.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          M809]
 gi|293537111|ref|ZP_06671791.1| conserved domain protein [Staphylococcus aureus subsp. aureus
          M1015]
 gi|294848701|ref|ZP_06789447.1| 50S ribosomal protein L35 [Staphylococcus aureus A9754]
 gi|295405990|ref|ZP_06815798.1| 50S ribosomal protein L35 [Staphylococcus aureus A8819]
 gi|295428251|ref|ZP_06820880.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          EMRSA16]
 gi|296274893|ref|ZP_06857400.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MR1]
 gi|297207607|ref|ZP_06924042.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ATCC 51811]
 gi|297245084|ref|ZP_06928961.1| 50S ribosomal protein L35 [Staphylococcus aureus A8796]
 gi|297590786|ref|ZP_06949424.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MN8]
 gi|300911689|ref|ZP_07129133.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TCH70]
 gi|304380729|ref|ZP_07363398.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ATCC BAA-39]
 gi|54036259|sp|Q6G8P6|RL35_STAAS RecName: Full=50S ribosomal protein L35
 gi|54036260|sp|Q6GG26|RL35_STAAR RecName: Full=50S ribosomal protein L35
 gi|54039206|sp|P66276|RL35_STAAN RecName: Full=50S ribosomal protein L35
 gi|54039207|sp|P66277|RL35_STAAW RecName: Full=50S ribosomal protein L35
 gi|54041903|sp|P66275|RL35_STAAM RecName: Full=50S ribosomal protein L35
 gi|73917401|sp|Q5HF93|RL35_STAAC RecName: Full=50S ribosomal protein L35
 gi|148887111|sp|Q2FG57|RL35_STAA3 RecName: Full=50S ribosomal protein L35
 gi|148887112|sp|Q2FXQ0|RL35_STAA8 RecName: Full=50S ribosomal protein L35
 gi|148887113|sp|Q2YTB0|RL35_STAAB RecName: Full=50S ribosomal protein L35
 gi|166233039|sp|A7X3A2|RL35_STAA1 RecName: Full=50S ribosomal protein L35
 gi|172048939|sp|A6QHL3|RL35_STAAE RecName: Full=50S ribosomal protein L35
 gi|189042791|sp|A6U2E7|RL35_STAA2 RecName: Full=50S ribosomal protein L35
 gi|189042792|sp|A5ITK4|RL35_STAA9 RecName: Full=50S ribosomal protein L35
 gi|13701476|dbj|BAB42770.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          N315]
 gi|14247451|dbj|BAB57841.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Mu50]
 gi|21204792|dbj|BAB95488.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MW2]
 gi|49242051|emb|CAG40750.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MRSA252]
 gi|49244949|emb|CAG43410.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MSSA476]
 gi|57284737|gb|AAW36831.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus COL]
 gi|82656799|emb|CAI81228.1| 50S ribosomal protein L35 [Staphylococcus aureus RF122]
 gi|87127316|gb|ABD21830.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          USA300_FPR3757]
 gi|87203044|gb|ABD30854.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus NCTC
          8325]
 gi|147741229|gb|ABQ49527.1| LSU ribosomal protein L35P [Staphylococcus aureus subsp. aureus
          JH9]
 gi|149946679|gb|ABR52615.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus JH1]
 gi|150374585|dbj|BAF67845.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          str. Newman]
 gi|156722132|dbj|BAF78549.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Mu3]
 gi|253723931|gb|EES92660.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          USA300_TCH959]
 gi|253727477|gb|EES96206.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TCH130]
 gi|257271489|gb|EEV03635.1| LSU ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          55/2053]
 gi|257275302|gb|EEV06789.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          65-1322]
 gi|257278043|gb|EEV08691.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          68-397]
 gi|257281871|gb|EEV12008.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          E1410]
 gi|257284045|gb|EEV14168.1| LSU ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          M876]
 gi|257788037|gb|EEV26377.1| 50S ribosomal protein L35 [Staphylococcus aureus A9781]
 gi|257839362|gb|EEV63835.1| 50S ribosomal protein L35 [Staphylococcus aureus A9763]
 gi|257842038|gb|EEV66467.1| LSU ribosomal protein L35 [Staphylococcus aureus A9719]
 gi|257845717|gb|EEV69749.1| LSU ribosomal protein L35 [Staphylococcus aureus A9635]
 gi|257848292|gb|EEV72283.1| ribosomal protein L35 [Staphylococcus aureus A9299]
 gi|257851112|gb|EEV75055.1| ribosomal protein L35 [Staphylococcus aureus A8115]
 gi|257855159|gb|EEV78098.1| 50S ribosomal protein L35 [Staphylococcus aureus A6300]
 gi|257858370|gb|EEV81255.1| 50S ribosomal protein L35 [Staphylococcus aureus A6224]
 gi|257860518|gb|EEV83344.1| 50S ribosomal protein L35 [Staphylococcus aureus A5948]
 gi|257863524|gb|EEV86283.1| ribosomal protein L35 [Staphylococcus aureus A5937]
 gi|259159852|gb|EEW44891.1| 50S ribosomal protein L35 [Staphylococcus aureus 930918-3]
 gi|259163301|gb|EEW47860.1| 50S ribosomal protein L35 [Staphylococcus aureus D30]
 gi|262075588|gb|ACY11561.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ED98]
 gi|269941160|emb|CBI49547.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TW20]
 gi|282313188|gb|EFB43584.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          C101]
 gi|282317255|gb|EFB47629.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          C427]
 gi|282319426|gb|EFB49778.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          D139]
 gi|282321657|gb|EFB51982.1| conserved domain protein [Staphylococcus aureus subsp. aureus
          M899]
 gi|282325002|gb|EFB55312.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          WBG10049]
 gi|282327255|gb|EFB57550.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          WW2703/97]
 gi|282331368|gb|EFB60882.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          Btn1260]
 gi|282590320|gb|EFB95399.1| 50S ribosomal protein L35 [Staphylococcus aureus A10102]
 gi|282594568|gb|EFB99553.1| 50S ribosomal protein L35 [Staphylococcus aureus A9765]
 gi|282595869|gb|EFC00833.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus C160]
 gi|282764493|gb|EFC04619.1| 50S ribosomal protein L35 [Staphylococcus aureus A8117]
 gi|283460891|gb|EFC07981.1| large subunit ribosomal protein L35 [Staphylococcus aureus subsp.
          aureus H19]
 gi|283470947|emb|CAQ50158.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus ST398]
 gi|283790580|gb|EFC29397.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          A017934/97]
 gi|285817363|gb|ADC37850.1| 50S ribosomal protein L35 [Staphylococcus aureus 04-02981]
 gi|290919956|gb|EFD97024.1| conserved domain protein [Staphylococcus aureus subsp. aureus
          M1015]
 gi|291095220|gb|EFE25485.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          58-424]
 gi|291466460|gb|EFF08981.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          M809]
 gi|294824727|gb|EFG41150.1| 50S ribosomal protein L35 [Staphylococcus aureus A9754]
 gi|294968987|gb|EFG45008.1| 50S ribosomal protein L35 [Staphylococcus aureus A8819]
 gi|295127651|gb|EFG57288.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          EMRSA16]
 gi|296887624|gb|EFH26522.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ATCC 51811]
 gi|297178164|gb|EFH37412.1| 50S ribosomal protein L35 [Staphylococcus aureus A8796]
 gi|297575672|gb|EFH94388.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MN8]
 gi|298694950|gb|ADI98172.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ED133]
 gi|300887110|gb|EFK82311.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TCH70]
 gi|302333345|gb|ADL23538.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          JKD6159]
 gi|302751506|gb|ADL65683.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          str. JKD6008]
 gi|304340728|gb|EFM06659.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          ATCC BAA-39]
 gi|312437862|gb|ADQ76933.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          TCH60]
 gi|312830058|emb|CBX34900.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus ECT-R
          2]
 gi|315130687|gb|EFT86673.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          CGS03]
 gi|315195584|gb|EFU25971.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          CGS00]
 gi|315198624|gb|EFU28952.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          CGS01]
 gi|320140442|gb|EFW32296.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MRSA131]
 gi|320143980|gb|EFW35749.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          MRSA177]
 gi|323440776|gb|EGA98485.1| 50S ribosomal protein L35 [Staphylococcus aureus O11]
 gi|323442931|gb|EGB00554.1| 50S ribosomal protein L35 [Staphylococcus aureus O46]
 gi|329314352|gb|AEB88765.1| 50S ribosomal protein L35 [Staphylococcus aureus subsp. aureus
          T0131]
 gi|329727239|gb|EGG63695.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus 21172]
 gi|329728333|gb|EGG64770.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus 21189]
 gi|329733190|gb|EGG69527.1| ribosomal protein L35 [Staphylococcus aureus subsp. aureus 21193]
          Length = 66

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   TA+G+++   A   H    +S K  R  R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTASGQLKRSRAFTSHLFANKSTKQKRQLRKARLVSKSDMKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|225022605|ref|ZP_03711797.1| hypothetical protein CORMATOL_02647 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305682179|ref|ZP_07404983.1| ribosomal protein L35 [Corynebacterium matruchotii ATCC 14266]
 gi|224944513|gb|EEG25722.1| hypothetical protein CORMATOL_02647 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305658652|gb|EFM48155.1| ribosomal protein L35 [Corynebacterium matruchotii ATCC 14266]
          Length = 64

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR   T +GK+R + A +RH +  + +K  R  +GT  +A AD K+V R  
Sbjct: 2  KQKTHKGTAKRIKTTGSGKLRRERANRRHLLEGKPSKRTRRLKGTTDVAPADTKRVKRLL 61


>gi|197122310|ref|YP_002134261.1| 50S ribosomal protein L35 [Anaeromyxobacter sp. K]
 gi|220917092|ref|YP_002492396.1| ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|226713815|sp|B4UAN6|RL35_ANASK RecName: Full=50S ribosomal protein L35
 gi|254802425|sp|B8J831|RL35_ANAD2 RecName: Full=50S ribosomal protein L35
 gi|196172159|gb|ACG73132.1| ribosomal protein L35 [Anaeromyxobacter sp. K]
 gi|219954946|gb|ACL65330.1| ribosomal protein L35 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 67

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI-KRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT S +KKRF    +GKV+ + AG RH     ++ K  R+ RGT  L   D KK+ 
Sbjct: 1  MPKLKTKSGAKKRFVPKKSGKVKFRRAGVRHLATFGKTKKQKRHLRGTDHLTPMDEKKIK 60

Query: 60 RNY 62
            +
Sbjct: 61 ECF 63


>gi|19745886|ref|NP_607022.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS8232]
 gi|23822057|sp|Q8P1H7|RL35_STRP8 RecName: Full=50S ribosomal protein L35
 gi|19748038|gb|AAL97521.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS8232]
          Length = 65

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKADLVSSGDFKRIK 59


>gi|71066552|ref|YP_265279.1| 50S ribosomal protein L35 [Psychrobacter arcticus 273-4]
 gi|148887096|sp|Q4FQ63|RL35_PSYA2 RecName: Full=50S ribosomal protein L35
 gi|71039537|gb|AAZ19845.1| LSU ribosomal protein L35P [Psychrobacter arcticus 273-4]
          Length = 65

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          KMKT S + KRF  TA G  + + A K H + K+S K IR  RG  ++  +D   V R
Sbjct: 4  KMKTRSGAAKRFKKTANG-FKRKQAFKSHILTKKSAKRIRQLRGLKMVDKSDEAAVRR 60


>gi|88608877|ref|YP_506109.1| ribosomal protein L35 [Neorickettsia sennetsu str. Miyayama]
 gi|88601046|gb|ABD46514.1| ribosomal protein L35 [Neorickettsia sennetsu str. Miyayama]
          Length = 68

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTNSS+KKRF +T+TGKV    +GKRH M KR+ + +   +G  +++ +   +++R
Sbjct: 3  MPKLKTNSSAKKRFKVTSTGKVMVTQSGKRHNMRKRNKRMLLVQKGYTLISKS-KMRLMR 61

Query: 61 NYLPN 65
          + +P 
Sbjct: 62 SVMPY 66


>gi|323698511|ref|ZP_08110423.1| ribosomal protein L35 [Desulfovibrio sp. ND132]
 gi|323458443|gb|EGB14308.1| ribosomal protein L35 [Desulfovibrio desulfuricans ND132]
          Length = 65

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS TATGK + +    RH + K++ K  R    +  + +A+ K V R
Sbjct: 1  MPKIKTRRAAAKRFSQTATGKFKRRRKNLRHILTKKNAKRKRRLGQSTTVDTANMKAVRR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 Q-LPNG 65


>gi|212715580|ref|ZP_03323708.1| hypothetical protein BIFCAT_00479 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225351393|ref|ZP_03742416.1| hypothetical protein BIFPSEUDO_02987 [Bifidobacterium
          pseudocatenulatum DSM 20438]
 gi|212660947|gb|EEB21522.1| hypothetical protein BIFCAT_00479 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225157737|gb|EEG71020.1| hypothetical protein BIFPSEUDO_02987 [Bifidobacterium
          pseudocatenulatum DSM 20438]
          Length = 64

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTNS++ KR  +T +GK+    +  RH +  +S +  R  +   VLA++ +K + +
Sbjct: 1  MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATSQSKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|118411035|ref|YP_874430.1| 50S ribosomal protein L35 [Phaeodactylum tricornutum]
 gi|125987618|sp|A0T0F5|RK35_PHATC RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|116739782|gb|ABK20653.1| 50S ribosomal protein L35 [Phaeodactylum tricornutum]
          Length = 64

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+  T T     + A K H ++K+SNK  R    T+ ++ +D K + +
Sbjct: 1  MPKLKTRKAAAKRYKRTGTSNFLRRHAFKGHLLMKKSNKQKRKLSQTICVSRSDIKSI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|315320525|ref|YP_004072581.1| 50S ribosomal protein L35 [Thalassiosira oceanica CCMP1005]
 gi|283568998|gb|ADB27535.1| 50S ribosomal protein L35 [Thalassiosira oceanica CCMP1005]
          Length = 64

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+  T  G    + A K H ++K+SN   R     + +A+ D+K + +
Sbjct: 1  MPKLKTRKAALKRYKKTGAGNFLRRHAYKGHLLMKKSNVQKRRLSQRVCVAAGDSKPI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|322411520|gb|EFY02428.1| 50S ribosomal protein L35 [Streptococcus dysgalactiae subsp.
          dysgalactiae ATCC 27957]
          Length = 65

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAGLVSSGDLKRIK 59


>gi|15674847|ref|NP_269021.1| 50S ribosomal protein L35 [Streptococcus pyogenes M1 GAS]
 gi|21910075|ref|NP_664343.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS315]
 gi|28896227|ref|NP_802577.1| 50S ribosomal protein L35 [Streptococcus pyogenes SSI-1]
 gi|50913983|ref|YP_059955.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS10394]
 gi|56808730|ref|ZP_00366449.1| COG0291: Ribosomal protein L35 [Streptococcus pyogenes M49 591]
 gi|71903265|ref|YP_280068.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS6180]
 gi|71910433|ref|YP_281983.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS5005]
 gi|94988306|ref|YP_596407.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS9429]
 gi|94990184|ref|YP_598284.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS10270]
 gi|94992182|ref|YP_600281.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS2096]
 gi|94994103|ref|YP_602201.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS10750]
 gi|139474013|ref|YP_001128729.1| 50S ribosomal protein L35 [Streptococcus pyogenes str. Manfredo]
 gi|209559174|ref|YP_002285646.1| 50S ribosomal protein L35 [Streptococcus pyogenes NZ131]
 gi|251782184|ref|YP_002996486.1| 50S ribosomal protein L35 [Streptococcus dysgalactiae subsp.
          equisimilis GGS_124]
 gi|306827593|ref|ZP_07460873.1| 50S ribosomal protein L35 [Streptococcus pyogenes ATCC 10782]
 gi|54039209|sp|P66281|RL35_STRP3 RecName: Full=50S ribosomal protein L35
 gi|54041905|sp|P66280|RL35_STRP1 RecName: Full=50S ribosomal protein L35
 gi|73917402|sp|Q5XCU1|RL35_STRP6 RecName: Full=50S ribosomal protein L35
 gi|118573023|sp|Q1JHJ6|RL35_STRPD RecName: Full=50S ribosomal protein L35
 gi|118573024|sp|Q1J7B7|RL35_STRPF RecName: Full=50S ribosomal protein L35
 gi|148887115|sp|Q1JCH1|RL35_STRPB RecName: Full=50S ribosomal protein L35
 gi|148887116|sp|Q1JME9|RL35_STRPC RecName: Full=50S ribosomal protein L35
 gi|148887117|sp|Q48U93|RL35_STRPM RecName: Full=50S ribosomal protein L35
 gi|166233040|sp|A2RF83|RL35_STRPG RecName: Full=50S ribosomal protein L35
 gi|226725073|sp|B5XKT9|RL35_STRPZ RecName: Full=50S ribosomal protein L35
 gi|13621981|gb|AAK33742.1| 50S ribosomal protein L35 [Streptococcus pyogenes M1 GAS]
 gi|21904266|gb|AAM79146.1| 50S ribosomal protein L35 [Streptococcus pyogenes MGAS315]
 gi|28811478|dbj|BAC64410.1| 50S ribosomal protein L35 [Streptococcus pyogenes SSI-1]
 gi|50903057|gb|AAT86772.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS10394]
 gi|71802360|gb|AAX71713.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS6180]
 gi|71853215|gb|AAZ51238.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS5005]
 gi|94541814|gb|ABF31863.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS9429]
 gi|94543692|gb|ABF33740.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS10270]
 gi|94545690|gb|ABF35737.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS2096]
 gi|94547611|gb|ABF37657.1| LSU ribosomal protein L35P [Streptococcus pyogenes MGAS10750]
 gi|134272260|emb|CAM30512.1| 50S ribosomal protein L35 [Streptococcus pyogenes str. Manfredo]
 gi|209540375|gb|ACI60951.1| LSU ribosomal protein L35p [Streptococcus pyogenes NZ131]
 gi|242390813|dbj|BAH81272.1| 50S ribosomal protein L35 [Streptococcus dysgalactiae subsp.
          equisimilis GGS_124]
 gi|304430156|gb|EFM33185.1| 50S ribosomal protein L35 [Streptococcus pyogenes ATCC 10782]
 gi|323127038|gb|ADX24335.1| 50S ribosomal protein L35 [Streptococcus dysgalactiae subsp.
          equisimilis ATCC 12394]
          Length = 65

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAGLVSSGDFKRIK 59


>gi|40062534|gb|AAR37479.1| ribosomal protein L35 [uncultured marine bacterium 106]
          Length = 75

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF  T  G  + + A  RHGM KR+    R  R   ++++AD+  V    
Sbjct: 13 KMKTHRGAAKRFKKTGGGGYKRKRAFLRHGMRKRNQDTKRVLRKKAMVSAADSNSVD-MM 71

Query: 63 LPNG 66
          LPNG
Sbjct: 72 LPNG 75


>gi|225552397|ref|ZP_03773337.1| ribosomal protein L35 [Borrelia sp. SV1]
 gi|225371395|gb|EEH00825.1| ribosomal protein L35 [Borrelia sp. SV1]
          Length = 66

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKHKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|224531683|ref|ZP_03672315.1| ribosomal protein L35 [Borrelia valaisiana VS116]
 gi|224511148|gb|EEF81554.1| ribosomal protein L35 [Borrelia valaisiana VS116]
          Length = 66

 Score = 54.7 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R    L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKLGNLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|307128593|ref|YP_003880623.1| 50S ribosomal protein L35 [Candidatus Sulcia muelleri CARI]
 gi|306483055|gb|ADM89925.1| 50S ribosomal protein L35 [Candidatus Sulcia muelleri CARI]
          Length = 65

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF +   GK++ + + K H + K+  K  R      ++  +D K + +
Sbjct: 1  MYKLKTKSGAKKRFKLIGNGKIKRKKSFKNHLLTKKKKKRKRRLSYYSIVHKSDIKNIKK 60

Query: 61 NYL 63
            L
Sbjct: 61 QLL 63


>gi|154482661|ref|ZP_02025109.1| hypothetical protein EUBVEN_00334 [Eubacterium ventriosum ATCC
          27560]
 gi|149736437|gb|EDM52323.1| hypothetical protein EUBVEN_00334 [Eubacterium ventriosum ATCC
          27560]
          Length = 65

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ ++ KRF  T TGK++   A K H + K+S K  RN R      + + K + +
Sbjct: 1  MPKIKTSRAAAKRFKKTGTGKLKRNKAYKSHILTKKSAKRKRNLRKATTTDATNVKNMKK 60

Query: 61 NY 62
            
Sbjct: 61 IL 62


>gi|124009347|ref|ZP_01694025.1| ribosomal protein L35 [Microscilla marina ATCC 23134]
 gi|123985009|gb|EAY24960.1| ribosomal protein L35 [Microscilla marina ATCC 23134]
          Length = 63

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K NSS+KKRF +T TGK++ + A KRH + K+  K  R    T ++  AD K V R  
Sbjct: 2  KVKKNSSAKKRFKLTGTGKIKRKKAFKRHILTKKGTKQKRRLGQTGLVDKADEKLVKRML 61


>gi|152996608|ref|YP_001341443.1| 50S ribosomal protein L35 [Marinomonas sp. MWYL1]
 gi|189042774|sp|A6VYH9|RL35_MARMS RecName: Full=50S ribosomal protein L35
 gi|150837532|gb|ABR71508.1| ribosomal protein L35 [Marinomonas sp. MWYL1]
          Length = 64

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+K++S + KRF  TA G  + + +   H + K+S K  R+ R    +A +D   ++R
Sbjct: 1  MSKIKSHSGAAKRFKRTANG-FKHKQSHTSHILTKKSTKRKRHLRSMNQIAQSDKALIVR 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 -MLPY 63


>gi|309778343|ref|ZP_07673269.1| ribosomal protein L35 [Erysipelotrichaceae bacterium 3_1_53]
 gi|308913909|gb|EFP59723.1| ribosomal protein L35 [Erysipelotrichaceae bacterium 3_1_53]
          Length = 64

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++    KR   T +GK++   A   H    ++ K  R+ R +  + S D K++ +
Sbjct: 1  MPKMKSHRGLAKRVKETGSGKLKRSHAYTSHRFHGKTQKQKRHLRKSGTVHSTDFKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|51598450|ref|YP_072638.1| 50S ribosomal protein L35 [Borrelia garinii PBi]
 gi|219684755|ref|ZP_03539698.1| ribosomal protein L35 [Borrelia garinii PBr]
 gi|219685824|ref|ZP_03540633.1| ribosomal protein L35 [Borrelia garinii Far04]
 gi|81691579|sp|Q662H5|RL35_BORGA RecName: Full=50S ribosomal protein L35
 gi|51573021|gb|AAU07046.1| ribosomal protein L35 [Borrelia garinii PBi]
 gi|219672117|gb|EED29171.1| ribosomal protein L35 [Borrelia garinii PBr]
 gi|219672657|gb|EED29687.1| ribosomal protein L35 [Borrelia garinii Far04]
          Length = 66

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|51892230|ref|YP_074921.1| 50S ribosomal protein L35 [Symbiobacterium thermophilum IAM
          14863]
 gi|81692145|sp|Q67QG6|RL35_SYMTH RecName: Full=50S ribosomal protein L35
 gi|51855919|dbj|BAD40077.1| 50S ribosomal protein L35 [Symbiobacterium thermophilum IAM
          14863]
          Length = 64

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  + KRF +T +G V+   + K H    +    IR  +  +VL+ +  K + R
Sbjct: 1  MPKMKSHRGAAKRFKLTGSGLVKHYPSNKHHKNTHKKENRIRALKRNLVLSKSFQKNI-R 59

Query: 61 NYLP 64
            LP
Sbjct: 60 EILP 63


>gi|307153796|ref|YP_003889180.1| 50S ribosomal protein L35 [Cyanothece sp. PCC 7822]
 gi|306984024|gb|ADN15905.1| ribosomal protein L35 [Cyanothece sp. PCC 7822]
          Length = 67

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 1  MPKMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFI-RNARGTMVLASADAKKV 58
          MPK+KT  ++ KRF  T +G K+  + A K H +  +S++   R      +++ AD K+V
Sbjct: 1  MPKLKTRKAAAKRFRATGSGKKIFRRKAYKNHLLQHKSSERKRRRLSEISLVSEADTKEV 60

Query: 59 IRNYLPN 65
           R  LP 
Sbjct: 61 -RLMLPY 66


>gi|157736344|ref|YP_001489027.1| 50S ribosomal protein L35 [Arcobacter butzleri RM4018]
 gi|315635479|ref|ZP_07890745.1| 50S ribosomal protein L35 [Arcobacter butzleri JV22]
 gi|166988031|sp|A8EQY4|RL35_ARCB4 RecName: Full=50S ribosomal protein L35
 gi|157698198|gb|ABV66358.1| 50S ribosomal protein L35 [Arcobacter butzleri RM4018]
 gi|315480237|gb|EFU70904.1| 50S ribosomal protein L35 [Arcobacter butzleri JV22]
          Length = 65

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF +   G ++  +A + H + K S K  RN RG   + S +   ++
Sbjct: 1  MPKMKSVKGAVKRFKVKKNGTIKRGSAFRSHILTKMSQKRKRNLRGPKTVHSTNVAGIL 59


>gi|20808118|ref|NP_623289.1| ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
 gi|22096085|sp|Q8R9C3|RL35_THETN RecName: Full=50S ribosomal protein L35
 gi|20516705|gb|AAM24893.1| Ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
          Length = 67

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  + KRF +  +GKV+   A K H +  +S+K  R  R    L  A AK + R  
Sbjct: 5  KMKTHRGAAKRFKVLKSGKVKRMKAYKSHLLTHKSSKRKRRLRKATYLEGASAKTIKR-L 63

Query: 63 LPN 65
          LP 
Sbjct: 64 LPY 66


>gi|283782963|ref|YP_003373717.1| ribosomal protein L35 [Gardnerella vaginalis 409-05]
 gi|283441374|gb|ADB13840.1| ribosomal protein L35 [Gardnerella vaginalis 409-05]
          Length = 64

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTNS++ KR  +T TGKV    +  RH +  +S +  R      VLA+A +KK+ 
Sbjct: 1  MPKMKTNSAASKRVRLTGTGKVMHDGSAMRHNLEHKSARKRRALSEDKVLATAQSKKLK 59


>gi|328957061|ref|YP_004374447.1| 50S ribosomal protein L35 [Carnobacterium sp. 17-4]
 gi|328673385|gb|AEB29431.1| 50S ribosomal protein L35 [Carnobacterium sp. 17-4]
          Length = 65

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T  G ++   A   H    +S K  R  R + +++S D K++ +
Sbjct: 1  MPKQKTHRGSAKRFKRTGNGGLKRHHAKTSHMFANKSQKQKRKLRKSAMVSSGDMKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|294464379|gb|ADE77702.1| unknown [Picea sitchensis]
          Length = 167

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 30/58 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK+ SS K RF    +G +R   AGKRH    +S K  R  R   ++  A AK + R
Sbjct: 105 KMKSYSSYKFRFRTLTSGLIRRWRAGKRHNAHSKSKKSKRRLRQPAIVTPAYAKVMKR 162


>gi|94499189|ref|ZP_01305727.1| ribosomal protein L35 [Oceanobacter sp. RED65]
 gi|94428821|gb|EAT13793.1| ribosomal protein L35 [Oceanobacter sp. RED65]
          Length = 65

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K+NS + KRF  T  G  + + A + H + K+S K  R  R  + + ++D   + R  
Sbjct: 4  KIKSNSGAAKRFKKTGNG-FKHRQAHRSHILTKKSTKRKRQLRPQLQVHASDVPLIKRML 62


>gi|172058198|ref|YP_001814658.1| 50S ribosomal protein L35 [Exiguobacterium sibiricum 255-15]
 gi|226725011|sp|B1YK03|RL35_EXIS2 RecName: Full=50S ribosomal protein L35
 gi|171990719|gb|ACB61641.1| ribosomal protein L35 [Exiguobacterium sibiricum 255-15]
          Length = 64

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++  + KRF  TA+GK++   A   H    +S K  R  R   +++S D K++ 
Sbjct: 1  MPKMKSHRGASKRFKRTASGKLKRGRAYTSHLFGNKSTKAKRKLRKASMVSSGDFKRIR 59


>gi|313899529|ref|ZP_07833038.1| ribosomal protein L35 [Clostridium sp. HGF2]
 gi|312955636|gb|EFR37295.1| ribosomal protein L35 [Clostridium sp. HGF2]
          Length = 64

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++    KR   T +GK++   A   H    ++ K  R+ R +  + S D K++  
Sbjct: 1  MPKMKSHRGLAKRVKQTGSGKLKRSHAYTSHRFHGKTQKQKRHLRKSGTVHSTDYKRIKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|118573022|sp|Q2RYT6|RL35_SALRD RecName: Full=50S ribosomal protein L35
          Length = 65

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 37/63 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S +KKRF  T  GK++ + A K H + K++ K  R  R ++V+     +  I+
Sbjct: 1  MPKMKSHSGAKKRFKKTGNGKIKRKKANKGHLLTKKNAKRKRQLRKSVVVDDKANRDRIK 60

Query: 61 NYL 63
            L
Sbjct: 61 RML 63


>gi|172040802|ref|YP_001800516.1| 50S ribosomal protein L35 [Corynebacterium urealyticum DSM 7109]
 gi|226724987|sp|B1VH41|RL35_CORU7 RecName: Full=50S ribosomal protein L35
 gi|171852106|emb|CAQ05082.1| 50S ribosomal protein L35 [Corynebacterium urealyticum DSM 7109]
          Length = 64

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + A +RH +  + +   R  +GT  +++AD K++ R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRRERAYRRHLLEGKPSTRTRRLKGTTDVSAADNKRMKRLL 61


>gi|154174571|ref|YP_001407371.1| 50S ribosomal protein L35 [Campylobacter curvus 525.92]
 gi|166231169|sp|A7GVX9|RL35_CAMC5 RecName: Full=50S ribosomal protein L35
 gi|112802369|gb|EAT99713.1| ribosomal protein L35 [Campylobacter curvus 525.92]
          Length = 63

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF +    K++  +A + H + K+ +K +R+ RG   +   +   V +
Sbjct: 1  MPKMKTVRGAAKRFKV-GKNKIKRGSAFRSHILTKKPSKRMRDLRGPHYVDGTNVSAVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|145633196|ref|ZP_01788927.1| hypothetical protein CGSHi3655_03166 [Haemophilus influenzae
          3655]
 gi|144986042|gb|EDJ92632.1| hypothetical protein CGSHi3655_03166 [Haemophilus influenzae
          3655]
          Length = 80

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKR 36
          MPK+KT   + KRF  TA+G  + + +  RH + K+
Sbjct: 25 MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKK 60


>gi|27468272|ref|NP_764909.1| 50S ribosomal protein L35 [Staphylococcus epidermidis ATCC 12228]
 gi|57867162|ref|YP_188817.1| 50S ribosomal protein L35 [Staphylococcus epidermidis RP62A]
 gi|223044147|ref|ZP_03614186.1| ribosomal protein L35 [Staphylococcus capitis SK14]
 gi|242242943|ref|ZP_04797388.1| 50S ribosomal protein L35 [Staphylococcus epidermidis W23144]
 gi|242373971|ref|ZP_04819545.1| 50S ribosomal protein L35 [Staphylococcus epidermidis M23864:W1]
 gi|251811073|ref|ZP_04825546.1| 50S ribosomal protein L35 [Staphylococcus epidermidis
          BCM-HMP0060]
 gi|282875900|ref|ZP_06284767.1| ribosomal protein L35 [Staphylococcus epidermidis SK135]
 gi|293366372|ref|ZP_06613051.1| 50S ribosomal protein L35 [Staphylococcus epidermidis
          M23864:W2(grey)]
 gi|314933834|ref|ZP_07841199.1| ribosomal protein L35 [Staphylococcus caprae C87]
 gi|38258572|sp|Q8CS76|RL35_STAES RecName: Full=50S ribosomal protein L35
 gi|81674276|sp|Q5HNM4|RL35_STAEQ RecName: Full=50S ribosomal protein L35
 gi|27315818|gb|AAO04953.1|AE016748_187 50S ribosomal protein L35 [Staphylococcus epidermidis ATCC 12228]
 gi|57637820|gb|AAW54608.1| ribosomal protein L35 [Staphylococcus epidermidis RP62A]
 gi|222442541|gb|EEE48647.1| ribosomal protein L35 [Staphylococcus capitis SK14]
 gi|242233544|gb|EES35856.1| 50S ribosomal protein L35 [Staphylococcus epidermidis W23144]
 gi|242348325|gb|EES39927.1| 50S ribosomal protein L35 [Staphylococcus epidermidis M23864:W1]
 gi|251805408|gb|EES58065.1| 50S ribosomal protein L35 [Staphylococcus epidermidis
          BCM-HMP0060]
 gi|281294925|gb|EFA87452.1| ribosomal protein L35 [Staphylococcus epidermidis SK135]
 gi|291319497|gb|EFE59864.1| 50S ribosomal protein L35 [Staphylococcus epidermidis
          M23864:W2(grey)]
 gi|313653984|gb|EFS17741.1| ribosomal protein L35 [Staphylococcus caprae C87]
 gi|319400995|gb|EFV89214.1| ribosomal protein L35 [Staphylococcus epidermidis FRI909]
 gi|329724664|gb|EGG61170.1| ribosomal protein L35 [Staphylococcus epidermidis VCU144]
 gi|329733770|gb|EGG70096.1| ribosomal protein L35 [Staphylococcus epidermidis VCU045]
 gi|329737115|gb|EGG73369.1| ribosomal protein L35 [Staphylococcus epidermidis VCU028]
          Length = 66

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +G+++   A   H    ++ K  R  R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRQLRKAKLVSKSDMKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|224534361|ref|ZP_03674939.1| ribosomal protein L35 [Borrelia spielmanii A14S]
 gi|224514463|gb|EEF84779.1| ribosomal protein L35 [Borrelia spielmanii A14S]
          Length = 66

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R    L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKLGSLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|166367076|ref|YP_001659349.1| 50S ribosomal protein L35 [Microcystis aeruginosa NIES-843]
 gi|189042775|sp|B0JSJ9|RL35_MICAN RecName: Full=50S ribosomal protein L35
 gi|166089449|dbj|BAG04157.1| 50S ribosomal protein L35 [Microcystis aeruginosa NIES-843]
          Length = 67

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGK-VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK+KT  ++ KRF  T +GK ++ + A K H +  +S +  R     + L     +K +
Sbjct: 1  MPKLKTRKAAAKRFEATGSGKKIKRRKAFKNHLLDHKSAERKRRRLSQITLVHERDEKEV 60

Query: 60 RNYLPN 65
          R  LP 
Sbjct: 61 RLMLPY 66


>gi|270290436|ref|ZP_06196661.1| 50S ribosomal protein L35 [Pediococcus acidilactici 7_4]
 gi|304384683|ref|ZP_07367029.1| 50S ribosomal protein L35 [Pediococcus acidilactici DSM 20284]
 gi|270281217|gb|EFA27050.1| 50S ribosomal protein L35 [Pediococcus acidilactici 7_4]
 gi|304328877|gb|EFL96097.1| 50S ribosomal protein L35 [Pediococcus acidilactici DSM 20284]
          Length = 66

 Score = 53.9 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++ S + K+  +
Sbjct: 1  MPKMKTNRAAAKRFKKTANGGLKSANAFTSHRFHGKTKKQRRQLRGTDMMDSTNVKRYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|227548136|ref|ZP_03978185.1| 50S ribosomal protein L35 [Corynebacterium lipophiloflavum DSM
          44291]
 gi|227079798|gb|EEI17761.1| 50S ribosomal protein L35 [Corynebacterium lipophiloflavum DSM
          44291]
          Length = 64

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  I+ +GK+R + AGKRH     S+K  R   GT  +A AD K++ R  
Sbjct: 2  KQKTHKGTAKRIKISGSGKLRREQAGKRHLNEGLSSKRRRKLSGTTDVAPADVKRMKRLL 61


>gi|261749264|ref|YP_003256949.1| 50S ribosomal protein L35 [Blattabacterium sp. (Periplaneta
          americana) str. BPLAN]
 gi|261497356|gb|ACX83806.1| ribosomal protein L35 [Blattabacterium sp. (Periplaneta
          americana) str. BPLAN]
          Length = 62

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT S SKKRF  TA G+++ + A K H + K+S K  R+     +L S+D K + +
Sbjct: 1  MPKLKTKSGSKKRFKKTANGRIKKKQAFKNHLLTKKSKKRKRHLSKFSLLKSSDKKNIKK 60

Query: 61 NY 62
           +
Sbjct: 61 QF 62


>gi|90410625|ref|ZP_01218641.1| 50S ribosomal protein L35 [Photobacterium profundum 3TCK]
 gi|90328866|gb|EAS45150.1| 50S ribosomal protein L35 [Photobacterium profundum 3TCK]
          Length = 64

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N  + KRF  TA G  + + A KRH + KR+ K  R  R   +L   +   V R
Sbjct: 1  MPKMKSNKGASKRFKKTAGG-FKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|171911359|ref|ZP_02926829.1| ribosomal protein L35 [Verrucomicrobium spinosum DSM 4136]
          Length = 69

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query: 5  KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KT  +  KRF IT TGKV  +  GKRH +  +S K  R+   T+++   DA  V  N 
Sbjct: 9  KTRKAVSKRFKITGTGKVLRRRQGKRHLLQNKSRKRKRSLGKTVLVDHTDAAAVKANM 66


>gi|291295768|ref|YP_003507166.1| 50S ribosomal protein L35 [Meiothermus ruber DSM 1279]
 gi|290470727|gb|ADD28146.1| ribosomal protein L35 [Meiothermus ruber DSM 1279]
          Length = 66

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT+  +K R  ITATGKV  +  GKRH    +S K  R        +  + ++V R
Sbjct: 1  MAKMKTHKGAKGRVKITATGKVVGKKPGKRHLNWHKSGKSRRQKGRDFTFSKGEERRVHR 60

Query: 61 NYLPN 65
            +P 
Sbjct: 61 -LMPY 64


>gi|118475088|ref|YP_891324.1| 50S ribosomal protein L35 [Campylobacter fetus subsp. fetus
          82-40]
 gi|261886099|ref|ZP_06010138.1| 50S ribosomal protein L35 [Campylobacter fetus subsp. venerealis
          str. Azul-94]
 gi|166231170|sp|A0RM91|RL35_CAMFF RecName: Full=50S ribosomal protein L35
 gi|118414314|gb|ABK82734.1| ribosomal protein L35 [Campylobacter fetus subsp. fetus 82-40]
          Length = 63

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+   + KRF +    K++  +A + H + K+ +K +R+ R +  + S +   V +
Sbjct: 1  MPKMKSVRGAAKRFKV-GKNKIKRGSAFRSHILTKKPSKRMRDLRQSQYVDSTNVSAVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|94502276|ref|ZP_01308758.1| ribosomal protein L35 [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|161833708|ref|YP_001597904.1| 50S ribosomal subunit protein L35 [Candidatus Sulcia muelleri
          GWSS]
 gi|293977818|ref|YP_003543248.1| 50S ribosomal protein L35P [Candidatus Sulcia muelleri DMIN]
 gi|189042794|sp|A8Z5V7|RL35_SULMW RecName: Full=50S ribosomal protein L35
 gi|94451169|gb|EAT14112.1| ribosomal protein L35 [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|152206198|gb|ABS30508.1| 50S ribosomal subunit protein L35 [Candidatus Sulcia muelleri
          GWSS]
 gi|292667749|gb|ADE35384.1| LSU ribosomal protein L35P [Candidatus Sulcia muelleri DMIN]
          Length = 65

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF     GK++ + + K H + K+ NK  R       +  +D K + +
Sbjct: 1  MFKLKTKSGAKKRFKFIVNGKIKRKKSFKNHLLTKKENKRKRRLSYFSRVHKSDIKNIKK 60

Query: 61 NYLPN 65
            L N
Sbjct: 61 QLLLN 65


>gi|323143351|ref|ZP_08078039.1| ribosomal protein L35 [Succinatimonas hippei YIT 12066]
 gi|322416869|gb|EFY07515.1| ribosomal protein L35 [Succinatimonas hippei YIT 12066]
          Length = 70

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+    KRF  T +G  + +    RH + K++ K  R  R    + S++ + ++R  
Sbjct: 8  KMKTDRGVAKRFKKTGSGHFKCRHQNLRHILTKKTRKRKRALRKMTYVHSSNIRAIVRQL 67


>gi|320169295|gb|EFW46194.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 205

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+K+ S+ K+RF + A G+ + + AGK+H  I +S K       T++  +   K + R  
Sbjct: 142 KLKSRSAVKRRFRLMANGRYKRRQAGKQHLNIHKSRKRKNRLAKTVLTTNTHTKTIRRIL 201


>gi|295112052|emb|CBL28802.1| LSU ribosomal protein L35P [Synergistetes bacterium SGP1]
          Length = 66

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 1  MPKMK--TNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK  ++S +KKRF  TA+GK+  +  G+ H M+ +  K +R  R T  +     ++ 
Sbjct: 1  MPKMKLKSHSGAKKRFFRTASGKLAYRKCGRSHIMVHKGAKRMRTLRKTGYVTETLMEQ- 59

Query: 59 IRNYLPN 65
          + + LP 
Sbjct: 60 MNHLLPY 66


>gi|15605569|ref|NP_220355.1| 50S ribosomal protein L35 [Chlamydia trachomatis D/UW-3/CX]
 gi|15834842|ref|NP_296601.1| 50S ribosomal protein L35 [Chlamydia muridarum Nigg]
 gi|76789579|ref|YP_328665.1| 50S ribosomal protein L35 [Chlamydia trachomatis A/HAR-13]
 gi|255311675|ref|ZP_05354245.1| 50S ribosomal protein L35 [Chlamydia trachomatis 6276]
 gi|255317976|ref|ZP_05359222.1| 50S ribosomal protein L35 [Chlamydia trachomatis 6276s]
 gi|255349239|ref|ZP_05381246.1| 50S ribosomal protein L35 [Chlamydia trachomatis 70]
 gi|255503776|ref|ZP_05382166.1| 50S ribosomal protein L35 [Chlamydia trachomatis 70s]
 gi|255507457|ref|ZP_05383096.1| 50S ribosomal protein L35 [Chlamydia trachomatis D(s)2923]
 gi|301335423|ref|ZP_07223667.1| 50S ribosomal protein L35 [Chlamydia trachomatis L2tet1]
 gi|301336405|ref|ZP_07224607.1| 50S ribosomal protein L35 [Chlamydia muridarum MopnTet14]
 gi|54039202|sp|P66268|RL35_CHLMU RecName: Full=50S ribosomal protein L35
 gi|54041899|sp|P66267|RL35_CHLTR RecName: Full=50S ribosomal protein L35
 gi|148840415|sp|Q3KKK5|RL35_CHLTA RecName: Full=50S ribosomal protein L35
 gi|3329305|gb|AAC68431.1| L35 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|7190261|gb|AAF39094.1| ribosomal protein L35 [Chlamydia muridarum Nigg]
 gi|76168109|gb|AAX51117.1| LSU ribosomal protein L35P [Chlamydia trachomatis A/HAR-13]
 gi|296435466|gb|ADH17644.1| 50S ribosomal protein L35 [Chlamydia trachomatis E/150]
 gi|296437321|gb|ADH19491.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/11222]
 gi|296439183|gb|ADH21336.1| 50S ribosomal protein L35 [Chlamydia trachomatis E/11023]
          Length = 64

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N S   RF +T +G+++    GKRH + KRS++  RN     ++         R
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRNLSKQPLVDQGQVGMYKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|260655003|ref|ZP_05860491.1| ribosomal protein L35 [Jonquetella anthropi E3_33 E1]
 gi|260630318|gb|EEX48512.1| ribosomal protein L35 [Jonquetella anthropi E3_33 E1]
          Length = 68

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K K+ S++KKRFS+TATGKVR    GK H +  ++ K  R  R   +++ A    + +  
Sbjct: 5  KTKSRSAAKKRFSLTATGKVRYHKCGKSHLLGCKNAKHRRRLRKAGIVSDAATPSI-KLM 63

Query: 63 LPN 65
          +P 
Sbjct: 64 IPY 66


>gi|217071304|gb|ACJ84012.1| unknown [Medicago truncatula]
          Length = 148

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT+ +S KRF +T  GK+  + AGK+H + K++ K        + +  +D   VI   
Sbjct: 79  KMKTHKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKRKLRLSKMIQVNRSDYDNVIGA- 137

Query: 63  LPN 65
           LP 
Sbjct: 138 LPY 140


>gi|111115012|ref|YP_709630.1| 50S ribosomal protein L35 [Borrelia afzelii PKo]
 gi|216264075|ref|ZP_03436069.1| ribosomal protein L35 [Borrelia afzelii ACA-1]
 gi|123341402|sp|Q0SNX4|RL35_BORAP RecName: Full=50S ribosomal protein L35
 gi|110890286|gb|ABH01454.1| ribosomal protein L35 [Borrelia afzelii PKo]
 gi|215980119|gb|EEC20941.1| ribosomal protein L35 [Borrelia afzelii ACA-1]
          Length = 66

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T  GKV+ +    RH + K+S+K  RN R +  L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNGKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKRI-KTL 62

Query: 63 LPN 65
          LP 
Sbjct: 63 LPY 65


>gi|110004467|emb|CAK98804.1| 50s ribosomal protein l35 [Spiroplasma citri]
          Length = 64

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  KR  +T TGK +   A   H    +  K  R+ R   ++   D  ++ +
Sbjct: 1  MPKMKTKKSLAKRVKVTGTGKWKIAHAYTSHLAQNKKTKQKRHLRKAGLMDQTDQSRLKQ 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|163788632|ref|ZP_02183077.1| 50S ribosomal protein L35 [Flavobacteriales bacterium ALC-1]
 gi|159875869|gb|EDP69928.1| 50S ribosomal protein L35 [Flavobacteriales bacterium ALC-1]
          Length = 65

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT SS+KKRF +T TGK++ + A K H + K+S K         ++  +D   V 
Sbjct: 1  MPKMKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLKLTHDGLVHKSDEDNVK 59


>gi|81429007|ref|YP_396007.1| 50S ribosomal protein L35 [Lactobacillus sakei subsp. sakei 23K]
 gi|148887080|sp|Q38VT3|RL35_LACSS RecName: Full=50S ribosomal protein L35
 gi|78610649|emb|CAI55700.1| 50S ribosomal protein L35 [Lactobacillus sakei subsp. sakei 23K]
          Length = 66

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  T  G ++   A   H    ++ K  R  R + +++++D +++ +
Sbjct: 1  MPKFKTHRASAKRFKRTGNGGLKRSHAYTSHRFHGKTKKQRRQLRKSGMVSNSDMRRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|227488134|ref|ZP_03918450.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227541531|ref|ZP_03971580.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51866]
 gi|227091996|gb|EEI27308.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227182687|gb|EEI63659.1| 50S ribosomal protein L35 [Corynebacterium glucuronolyticum ATCC
          51866]
          Length = 64

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+    KR  I+  GK+R + AG+RH +  + +K  R  +GT+ +A AD K+V R  
Sbjct: 2  KQKTHKGMAKRVKISGKGKLRRERAGRRHLLESKPSKRTRRLKGTVDVAPADVKRVKRLL 61


>gi|83647270|ref|YP_435705.1| 50S ribosomal protein L35 [Hahella chejuensis KCTC 2396]
 gi|148887076|sp|Q2SDJ4|RL35_HAHCH RecName: Full=50S ribosomal protein L35
 gi|83635313|gb|ABC31280.1| ribosomal protein L35 [Hahella chejuensis KCTC 2396]
          Length = 63

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+ KRF  TA G  + + +   H + K+S K  R+ R    +  +D   + R
Sbjct: 1  MPKMKSKSSAAKRFKKTANG-FKHRQSFTSHILTKKSTKRKRHLRPKKQVNPSDVPLIKR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|296436390|gb|ADH18564.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/9768]
 gi|296438249|gb|ADH20410.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/11074]
 gi|297140750|gb|ADH97508.1| 50S ribosomal protein L35 [Chlamydia trachomatis G/9301]
          Length = 64

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N S   RF +T +G+++    GKRH + KRS++  RN     ++         R
Sbjct: 1  MPKMKSNKSVATRFKLTGSGQLKRTRPGKRHKLSKRSSQQKRNLSKQPLVDQGQVGMYKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|300311296|ref|YP_003775388.1| 50S ribosomal protein L35 [Herbaspirillum seropedicae SmR1]
 gi|300074081|gb|ADJ63480.1| 50S ribosomal subunit L35 protein [Herbaspirillum seropedicae
          SmR1]
          Length = 65

 Score = 53.5 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+ SS+KKRF +   G V+   A KRH + K++ K  R  RGT  +   +   V R
Sbjct: 1  MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSV-R 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 AMLPF 64


>gi|300087923|ref|YP_003758445.1| 50S ribosomal protein L35 [Dehalogenimonas lykanthroporepellens
          BL-DC-9]
 gi|299527656|gb|ADJ26124.1| ribosomal protein L35 [Dehalogenimonas lykanthroporepellens
          BL-DC-9]
          Length = 66

 Score = 53.5 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  ++ RF  T  GK+      K H   K+S +  R     + +A AD K++ R
Sbjct: 1  MPKIKTHKGAQNRFKFTGNGKMMRVKGPKSHLRRKKSPRTRRLFDEMIPVAKADVKRLSR 60

Query: 61 NYLPNG 66
            +P G
Sbjct: 61 -LVPYG 65


>gi|23335404|ref|ZP_00120640.1| COG0291: Ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|23465928|ref|NP_696531.1| 50S ribosomal protein L35 [Bifidobacterium longum NCC2705]
 gi|189439096|ref|YP_001954177.1| 50S ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|213691795|ref|YP_002322381.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|239621210|ref|ZP_04664241.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          CCUG 52486]
 gi|296454372|ref|YP_003661515.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JDM301]
 gi|312132533|ref|YP_003999872.1| rpmi [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482510|ref|ZP_07941526.1| ribosomal protein L35 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689458|ref|YP_004209192.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          157F]
 gi|322691426|ref|YP_004220996.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JCM 1217]
 gi|54036315|sp|Q8G4L2|RL35_BIFLO RecName: Full=50S ribosomal protein L35
 gi|226713823|sp|B3DQT3|RL35_BIFLD RecName: Full=50S ribosomal protein L35
 gi|254802434|sp|B7GQC3|RL35_BIFLI RecName: Full=50S ribosomal protein L35
 gi|23326637|gb|AAN25167.1| 50S ribosomal protein L35 [Bifidobacterium longum NCC2705]
 gi|189427531|gb|ACD97679.1| Ribosomal protein L35 [Bifidobacterium longum DJO10A]
 gi|213523256|gb|ACJ52003.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|239515671|gb|EEQ55538.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          CCUG 52486]
 gi|291516704|emb|CBK70320.1| LSU ribosomal protein L35P [Bifidobacterium longum subsp. longum
          F8]
 gi|296183803|gb|ADH00685.1| ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JDM301]
 gi|311773467|gb|ADQ02955.1| RpmI [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916062|gb|EFV37468.1| ribosomal protein L35 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456282|dbj|BAJ66904.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. longum
          JCM 1217]
 gi|320457889|dbj|BAJ68510.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 15697]
 gi|320460794|dbj|BAJ71414.1| 50S ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          157F]
          Length = 64

 Score = 53.5 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTNS++ KR  IT TGKV+   +  RH +  +S +  R      VL    AKK+
Sbjct: 1  MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKL 58


>gi|255074475|ref|XP_002500912.1| predicted protein [Micromonas sp. RCC299]
 gi|226516175|gb|ACO62170.1| predicted protein [Micromonas sp. RCC299]
          Length = 123

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN S+ KRF ITA+GKV  +  GK+H    ++ +      G   +  A+   +++  
Sbjct: 56  KAKTNKSAAKRFKITASGKVLHRRPGKQHLNGHKTTERKTRLSGERQI-GAEQIPLVKGL 114

Query: 63  LPN 65
           LP 
Sbjct: 115 LPY 117


>gi|269837201|ref|YP_003319429.1| 50S ribosomal protein L35 [Sphaerobacter thermophilus DSM 20745]
 gi|269786464|gb|ACZ38607.1| ribosomal protein L35 [Sphaerobacter thermophilus DSM 20745]
          Length = 66

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+S +K+RF I+A GK+      + H   K++ + +R     + +A A  K++ R
Sbjct: 1  MPKMKTHSGAKRRFKISAGGKIMRMHGERSHLRRKKAKRRLRAFDKMVEVAPASRKQLRR 60

Query: 61 NYLPNG 66
            LP G
Sbjct: 61 -LLPYG 65


>gi|229820870|ref|YP_002882396.1| ribosomal protein L35 [Beutenbergia cavernae DSM 12333]
 gi|259647344|sp|C5BW33|RL35_BEUC1 RecName: Full=50S ribosomal protein L35
 gi|229566783|gb|ACQ80634.1| ribosomal protein L35 [Beutenbergia cavernae DSM 12333]
          Length = 64

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTNS +KKRF +T +GK+  + A + H   +RS   +R       ++SAD K + +
Sbjct: 1  MPKNKTNSGAKKRFRVTGSGKIMHKRAHQTHKFEERSRSSVRRLSNDAEVSSADRKSIKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|302688517|ref|XP_003033938.1| hypothetical protein SCHCODRAFT_33122 [Schizophyllum commune
          H4-8]
 gi|300107633|gb|EFI99035.1| hypothetical protein SCHCODRAFT_33122 [Schizophyllum commune
          H4-8]
          Length = 66

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  +KKR++   +GK +   A  +H    ++         T         K+ +  
Sbjct: 1  KMKTHQGAKKRWTSLPSGKFKRAHAFHQHLNTNKTPAQKNRLGKTAYSTHTQTVKLKKAI 60

Query: 63 LPNG 66
          LP G
Sbjct: 61 LPYG 64


>gi|308800158|ref|XP_003074860.1| Rpl35p ribosomal protein L35, chloroplast precursor (IC)
           [Ostreococcus tauri]
 gi|119358813|emb|CAL52127.2| Rpl35p ribosomal protein L35, chloroplast precursor (IC)
           [Ostreococcus tauri]
          Length = 121

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMKT  S+ KR+ +TA+GKV  +  GK H    ++++          + ++    ++R  
Sbjct: 57  KMKTRKSAAKRYKVTASGKVMHRRPGKAHLNGPKTSERKARLGIESAVGTSQMP-LVRAC 115

Query: 63  LPN 65
           LP 
Sbjct: 116 LPY 118


>gi|317153728|ref|YP_004121776.1| 50S ribosomal protein L35 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943979|gb|ADU63030.1| ribosomal protein L35 [Desulfovibrio aespoeensis Aspo-2]
          Length = 65

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRFS TA+GK + +    RH + K++ K  R    + ++ S + K V R
Sbjct: 1  MPKIKTRRAAAKRFSKTASGKFKRRRKNLRHILTKKNAKRKRRLGQSTLVDSTNMKAVRR 60

Query: 61 NYLPNG 66
            LPNG
Sbjct: 61 Q-LPNG 65


>gi|119472427|ref|ZP_01614545.1| 50S ribosomal subunit protein A [Alteromonadales bacterium TW-7]
 gi|332534269|ref|ZP_08410113.1| 50S ribosomal protein L35 [Pseudoalteromonas haloplanktis
          ANT/505]
 gi|119444949|gb|EAW26247.1| 50S ribosomal subunit protein A [Alteromonadales bacterium TW-7]
 gi|332036265|gb|EGI72737.1| 50S ribosomal protein L35 [Pseudoalteromonas haloplanktis
          ANT/505]
          Length = 66

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K++S + KRF  TA+G  + + A  RH + K+++K   + R  M++   D   V R  
Sbjct: 4  KLKSHSGAAKRFKKTASGGFKRKQAHLRHILTKKTSKRKLHLRPKMMVHKNDHGLVSRML 63


>gi|73662394|ref|YP_301175.1| 50S ribosomal protein L35 [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
 gi|82581591|sp|Q49YB1|RL35_STAS1 RecName: Full=50S ribosomal protein L35
 gi|72494909|dbj|BAE18230.1| 50S ribosomal protein L35 [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
          Length = 66

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 32/63 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +GK++   A   H    +S K  R  R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGKLKRSRAFTSHLFANKSTKQKRKLRKASLVSKSDMKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|167948465|ref|ZP_02535539.1| 50S ribosomal protein L35 [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 61

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRS 37
          MPK+KTN  + KRF  TA+G  +  A+ +RH + K+S
Sbjct: 1  MPKIKTNRGAAKRFKRTASGSFKRNASHRRHILTKKS 37


>gi|11467493|ref|NP_043639.1| ribosomal protein L35 [Odontella sinensis]
 gi|1350647|sp|P49567|RK35_ODOSI RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|1185188|emb|CAA91671.1| 50S ribosomal protein L35 [Odontella sinensis]
          Length = 64

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+  TATGK   + A K H ++K+S    R     + +++ D+K + +
Sbjct: 1  MPKLKTRKAALKRYKKTATGKFLRRHAYKGHLLMKKSKTQKRKLSQIICVSNNDSKPI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|15828731|ref|NP_326091.1| 50S ribosomal protein L35 [Mycoplasma pulmonis UAB CTIP]
 gi|20139645|sp|Q98QV1|RL35_MYCPU RecName: Full=50S ribosomal protein L35
 gi|14089673|emb|CAC13433.1| 50S RIBOSOMAL PROTEIN L35 [Mycoplasma pulmonis]
          Length = 64

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+ S+ KKR  IT TGK++   A + H    ++ K  R +R   ++  +D K+  
Sbjct: 1  MPKMKSKSALKKRIKITGTGKIKRHQAFRSHLAQNKTTKQKRQSRNAELMHKSDYKRFK 59


>gi|225849638|ref|YP_002729872.1| 50S ribosomal protein L35 [Persephonella marina EX-H1]
 gi|254802464|sp|C0QT57|RL35_PERMH RecName: Full=50S ribosomal protein L35
 gi|225646407|gb|ACO04593.1| ribosomal protein L35 [Persephonella marina EX-H1]
          Length = 68

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN ++ KRF +TA GK++    G  H   K+S+K  R  R    +    A +V +  
Sbjct: 5  KMKTNKTAAKRFKVTAKGKIKYWKGGVSHYNTKKSSKRKRQGRKADYVPENIADRV-KQL 63

Query: 63 LPN 65
          +P 
Sbjct: 64 IPY 66


>gi|195977986|ref|YP_002123230.1| 50S ribosomal protein L35 [Streptococcus equi subsp.
          zooepidemicus MGCS10565]
 gi|225868682|ref|YP_002744630.1| 50S ribosomal protein L35 [Streptococcus equi subsp.
          zooepidemicus]
 gi|225870361|ref|YP_002746308.1| 50S ribosomal protein L35 [Streptococcus equi subsp. equi 4047]
 gi|226725067|sp|B4U2K0|RL35_STREM RecName: Full=50S ribosomal protein L35
 gi|254802470|sp|C0M8T0|RL35_STRE4 RecName: Full=50S ribosomal protein L35
 gi|259647363|sp|C0MGL9|RL35_STRS7 RecName: Full=50S ribosomal protein L35
 gi|195974691|gb|ACG62217.1| 50S ribosomal protein L35 RpmI [Streptococcus equi subsp.
          zooepidemicus MGCS10565]
 gi|225699765|emb|CAW93546.1| 50S ribosomal protein L35 [Streptococcus equi subsp. equi 4047]
 gi|225701958|emb|CAW99499.1| 50S ribosomal protein L35 [Streptococcus equi subsp.
          zooepidemicus]
          Length = 65

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ + D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAGMVHAGDFKRIK 59


>gi|118411119|ref|YP_874513.1| 50S ribosomal protein L35 [Thalassiosira pseudonana]
 gi|125987619|sp|A0T0Q1|RK35_THAPS RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|116739866|gb|ABK20736.1| 50S ribosomal protein L35 [Thalassiosira pseudonana]
          Length = 64

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+  T  G    + A K H ++K+SN   R     + ++S D+K + +
Sbjct: 1  MPKLKTRKAALKRYKKTGAGNFLRRHAYKGHLLMKKSNAQKRKLSQRVCVSSGDSKPI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|223937574|ref|ZP_03629477.1| ribosomal protein L35 [bacterium Ellin514]
 gi|223893737|gb|EEF60195.1| ribosomal protein L35 [bacterium Ellin514]
          Length = 69

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          +KT  S  KRF ITATGKV    AG+RH +  ++ K  RN   +  + S D  ++ +N 
Sbjct: 7  IKTKKSVAKRFKITATGKVMRSRAGRRHLLASKNAKRRRNLGTSKEVDSTDTYRIKQNL 65


>gi|187736046|ref|YP_001878158.1| ribosomal protein L35 [Akkermansia muciniphila ATCC BAA-835]
 gi|187426098|gb|ACD05377.1| ribosomal protein L35 [Akkermansia muciniphila ATCC BAA-835]
          Length = 69

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KT  +  KRF +T TGKV  +  GKRH + K+S+K  R      ++       V +N 
Sbjct: 8  NKTRKAVAKRFKVTGTGKVLRRKQGKRHILQKKSSKRKRQLGKVALVDETQVWAVKQNL 66


>gi|116333671|ref|YP_795198.1| ribosomal protein L35 [Lactobacillus brevis ATCC 367]
 gi|122269642|sp|Q03RK5|RL35_LACBA RecName: Full=50S ribosomal protein L35
 gi|116099018|gb|ABJ64167.1| LSU ribosomal protein L35P [Lactobacillus brevis ATCC 367]
          Length = 64

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPKMKTN ++ KRF +TA G +++  A   H    ++ K  RN RGT ++     K
Sbjct: 1  MPKMKTNRAAAKRFKVTAKGGIKSANAYTSHRFHGKTKKQRRNLRGTRMMNETTIK 56


>gi|16800962|ref|NP_471230.1| 50S ribosomal protein L35 [Listeria innocua Clip11262]
 gi|16803824|ref|NP_465309.1| 50S ribosomal protein L35 [Listeria monocytogenes EGD-e]
 gi|46908014|ref|YP_014403.1| 50S ribosomal protein L35 [Listeria monocytogenes serotype 4b
          str. F2365]
 gi|47094153|ref|ZP_00231873.1| ribosomal protein L35 [Listeria monocytogenes str. 4b H7858]
 gi|47097524|ref|ZP_00235063.1| ribosomal protein L35 [Listeria monocytogenes str. 1/2a F6854]
 gi|116873221|ref|YP_850002.1| 50S ribosomal protein L35 [Listeria welshimeri serovar 6b str.
          SLCC5334]
 gi|217964068|ref|YP_002349746.1| ribosomal protein L35 [Listeria monocytogenes HCC23]
 gi|224500778|ref|ZP_03669127.1| 50S ribosomal protein L35 [Listeria monocytogenes Finland 1988]
 gi|224503785|ref|ZP_03672092.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL R2-561]
 gi|226224387|ref|YP_002758494.1| ribosomal protein L35 [Listeria monocytogenes Clip81459]
 gi|254826390|ref|ZP_05231391.1| ribosomal protein L35 [Listeria monocytogenes FSL J1-194]
 gi|254829586|ref|ZP_05234273.1| ribosomal protein L35 [Listeria monocytogenes FSL N3-165]
 gi|254832539|ref|ZP_05237194.1| 50S ribosomal protein L35 [Listeria monocytogenes 10403S]
 gi|254854527|ref|ZP_05243875.1| ribosomal protein L35 [Listeria monocytogenes FSL R2-503]
 gi|254901189|ref|ZP_05261113.1| 50S ribosomal protein L35 [Listeria monocytogenes J0161]
 gi|254914078|ref|ZP_05264090.1| 50S ribosomal protein L35 [Listeria monocytogenes J2818]
 gi|254933633|ref|ZP_05266992.1| ribosomal protein L35 [Listeria monocytogenes HPB2262]
 gi|254938392|ref|ZP_05270089.1| ribosomal protein L35 [Listeria monocytogenes F6900]
 gi|254993709|ref|ZP_05275899.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J2-064]
 gi|255028318|ref|ZP_05300269.1| 50S ribosomal protein L35 [Listeria monocytogenes LO28]
 gi|255521084|ref|ZP_05388321.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J1-175]
 gi|284802228|ref|YP_003414093.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5578]
 gi|284995370|ref|YP_003417138.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5923]
 gi|289435124|ref|YP_003464996.1| 50S ribosomal protein L35 [Listeria seeligeri serovar 1/2b str.
          SLCC3954]
 gi|290893088|ref|ZP_06556077.1| ribosomal protein L35 [Listeria monocytogenes FSL J2-071]
 gi|300766430|ref|ZP_07076385.1| ribosomal protein L35 [Listeria monocytogenes FSL N1-017]
 gi|315282774|ref|ZP_07871104.1| ribosomal protein L35 [Listeria marthii FSL S4-120]
 gi|315303673|ref|ZP_07874198.1| ribosomal protein L35 [Listeria ivanovii FSL F6-596]
 gi|54036268|sp|Q71YN4|RL35_LISMF RecName: Full=50S ribosomal protein L35
 gi|61230569|sp|P0A491|RL35_LISMO RecName: Full=50S ribosomal protein L35
 gi|61230578|sp|P0A492|RL35_LISIN RecName: Full=50S ribosomal protein L35
 gi|123461183|sp|A0AJP1|RL35_LISW6 RecName: Full=50S ribosomal protein L35
 gi|254802456|sp|B8DDX3|RL35_LISMH RecName: Full=50S ribosomal protein L35
 gi|259647358|sp|C1KW83|RL35_LISMC RecName: Full=50S ribosomal protein L35
 gi|16411238|emb|CAC99862.1| ribosomal protein L35 [Listeria monocytogenes EGD-e]
 gi|16414397|emb|CAC97126.1| ribosomal protein L35 [Listeria innocua Clip11262]
 gi|46881284|gb|AAT04580.1| ribosomal protein L35 [Listeria monocytogenes serotype 4b str.
          F2365]
 gi|47014107|gb|EAL05101.1| ribosomal protein L35 [Listeria monocytogenes str. 1/2a F6854]
 gi|47017478|gb|EAL08291.1| ribosomal protein L35 [Listeria monocytogenes str. 4b H7858]
 gi|116742099|emb|CAK21223.1| 50S ribosomal protein L35 [Listeria welshimeri serovar 6b str.
          SLCC5334]
 gi|217333338|gb|ACK39132.1| ribosomal protein L35 [Listeria monocytogenes HCC23]
 gi|225876849|emb|CAS05558.1| ribosomal protein L35 [Listeria monocytogenes serotype 4b str.
          CLIP 80459]
 gi|258602003|gb|EEW15328.1| ribosomal protein L35 [Listeria monocytogenes FSL N3-165]
 gi|258607927|gb|EEW20535.1| ribosomal protein L35 [Listeria monocytogenes FSL R2-503]
 gi|258611004|gb|EEW23612.1| ribosomal protein L35 [Listeria monocytogenes F6900]
 gi|284057790|gb|ADB68731.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5578]
 gi|284060837|gb|ADB71776.1| 50S ribosomal protein L35 [Listeria monocytogenes 08-5923]
 gi|289171368|emb|CBH27910.1| 50S ribosomal protein L35 [Listeria seeligeri serovar 1/2b str.
          SLCC3954]
 gi|290557448|gb|EFD90973.1| ribosomal protein L35 [Listeria monocytogenes FSL J2-071]
 gi|293585196|gb|EFF97228.1| ribosomal protein L35 [Listeria monocytogenes HPB2262]
 gi|293592098|gb|EFG00433.1| 50S ribosomal protein L35 [Listeria monocytogenes J2818]
 gi|293595630|gb|EFG03391.1| ribosomal protein L35 [Listeria monocytogenes FSL J1-194]
 gi|300512854|gb|EFK39946.1| ribosomal protein L35 [Listeria monocytogenes FSL N1-017]
 gi|307571364|emb|CAR84543.1| ribosomal protein L35 [Listeria monocytogenes L99]
 gi|313608206|gb|EFR84231.1| ribosomal protein L35 [Listeria monocytogenes FSL F2-208]
 gi|313613578|gb|EFR87392.1| ribosomal protein L35 [Listeria marthii FSL S4-120]
 gi|313618352|gb|EFR90388.1| ribosomal protein L35 [Listeria innocua FSL S4-378]
 gi|313623315|gb|EFR93547.1| ribosomal protein L35 [Listeria innocua FSL J1-023]
 gi|313627963|gb|EFR96571.1| ribosomal protein L35 [Listeria ivanovii FSL F6-596]
 gi|313632796|gb|EFR99752.1| ribosomal protein L35 [Listeria seeligeri FSL N1-067]
 gi|313637377|gb|EFS02855.1| ribosomal protein L35 [Listeria seeligeri FSL S4-171]
 gi|328466427|gb|EGF37575.1| 50S ribosomal protein L35 [Listeria monocytogenes 1816]
 gi|328473851|gb|EGF44681.1| 50S ribosomal protein L35 [Listeria monocytogenes 220]
 gi|332312224|gb|EGJ25319.1| Ribosomal protein L35 [Listeria monocytogenes str. Scott A]
          Length = 66

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  S KRF  T +GK++ +     H    +S K  R  R + ++++ D K++ 
Sbjct: 1  MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKLRKSAMVSAGDFKRIR 59


>gi|315038855|ref|YP_004032423.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1112]
 gi|312276988|gb|ADQ59628.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1112]
          Length = 66

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ 
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSCSDMKRIK 59


>gi|319790151|ref|YP_004151784.1| ribosomal protein L35 [Thermovibrio ammonificans HB-1]
 gi|317114653|gb|ADU97143.1| ribosomal protein L35 [Thermovibrio ammonificans HB-1]
          Length = 65

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 32/57 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK+KT  S+ KR  +TA GK++  + GK H + K+S K  RN R    L  A A  
Sbjct: 1  MPKIKTRRSAAKRVKVTAKGKIKHWSPGKSHILTKKSRKRKRNLRKAKYLEGAQAAN 57


>gi|224542062|ref|ZP_03682601.1| hypothetical protein CATMIT_01236 [Catenibacterium mitsuokai DSM
          15897]
 gi|224524995|gb|EEF94100.1| hypothetical protein CATMIT_01236 [Catenibacterium mitsuokai DSM
          15897]
          Length = 62

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+S  KKR   TA+GK++   A   H    +++K  ++   + ++  +D K++ 
Sbjct: 1  MPKMKTHSGLKKRLKKTASGKLKRGHAYVSHLSHNKTHKQKKHLAKSTLVHPSDYKRIK 59


>gi|223039202|ref|ZP_03609492.1| ribosomal protein L35 [Campylobacter rectus RM3267]
 gi|222879563|gb|EEF14654.1| ribosomal protein L35 [Campylobacter rectus RM3267]
          Length = 63

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT   + KRF +    K++  +A + H + K+S    R+ R    + S +   V 
Sbjct: 1  MPKMKTVRGAAKRFKV-GKNKIKRGSAFRSHILTKKSRNRKRDLRSPQYVDSTNVASVK 58


>gi|116495179|ref|YP_806913.1| ribosomal protein L35 [Lactobacillus casei ATCC 334]
 gi|191638687|ref|YP_001987853.1| 50S ribosomal protein L35 [Lactobacillus casei BL23]
 gi|199597225|ref|ZP_03210657.1| Ribosomal protein L35 [Lactobacillus rhamnosus HN001]
 gi|227534805|ref|ZP_03964854.1| ribosomal protein L35 [Lactobacillus paracasei subsp. paracasei
          ATCC 25302]
 gi|229552544|ref|ZP_04441269.1| ribosomal protein L35 [Lactobacillus rhamnosus LMS2-1]
 gi|239632060|ref|ZP_04675091.1| 50S ribosomal protein L35 [Lactobacillus paracasei subsp.
          paracasei 8700:2]
 gi|258508741|ref|YP_003171492.1| 50S ribosomal protein L35 [Lactobacillus rhamnosus GG]
 gi|258539917|ref|YP_003174416.1| 50S ribosomal protein L35 [Lactobacillus rhamnosus Lc 705]
 gi|301066742|ref|YP_003788765.1| 50S ribosomal protein L35 [Lactobacillus casei str. Zhang]
 gi|122263404|sp|Q038A1|RL35_LACC3 RecName: Full=50S ribosomal protein L35
 gi|226725023|sp|B3WF44|RL35_LACCB RecName: Full=50S ribosomal protein L35
 gi|116105329|gb|ABJ70471.1| LSU ribosomal protein L35P [Lactobacillus casei ATCC 334]
 gi|190712989|emb|CAQ66995.1| 50S ribosomal protein L35 [Lactobacillus casei BL23]
 gi|199592029|gb|EDZ00104.1| Ribosomal protein L35 [Lactobacillus rhamnosus HN001]
 gi|227187561|gb|EEI67628.1| ribosomal protein L35 [Lactobacillus paracasei subsp. paracasei
          ATCC 25302]
 gi|229314096|gb|EEN80069.1| ribosomal protein L35 [Lactobacillus rhamnosus LMS2-1]
 gi|239526525|gb|EEQ65526.1| 50S ribosomal protein L35 [Lactobacillus paracasei subsp.
          paracasei 8700:2]
 gi|257148668|emb|CAR87641.1| LSU/50S ribosomal protein L35P [Lactobacillus rhamnosus GG]
 gi|257151593|emb|CAR90565.1| LSU/50S ribosomal protein L35P [Lactobacillus rhamnosus Lc 705]
 gi|259650047|dbj|BAI42209.1| 50S ribosomal protein L35 [Lactobacillus rhamnosus GG]
 gi|300439149|gb|ADK18915.1| Ribosomal protein L35 [Lactobacillus casei str. Zhang]
 gi|327382728|gb|AEA54204.1| 50S ribosomal protein L35 [Lactobacillus casei LC2W]
 gi|327385915|gb|AEA57389.1| 50S ribosomal protein L35 [Lactobacillus casei BD-II]
 gi|328479654|gb|EGF48831.1| 50S ribosomal protein L35 [Lactobacillus rhamnosus MTCC 5462]
          Length = 66

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  TA+G ++   A   H    ++ K  R  R + +++ +D K++ +
Sbjct: 1  MPKFKTHRASAKRFKKTASGALKRGHAYTSHRFHGKTKKQRRQLRKSALVSHSDMKRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|154149059|ref|YP_001406081.1| ribosomal protein L35 [Campylobacter hominis ATCC BAA-381]
 gi|166231171|sp|A7I0P0|RL35_CAMHC RecName: Full=50S ribosomal protein L35
 gi|153805068|gb|ABS52075.1| ribosomal protein L35 [Campylobacter hominis ATCC BAA-381]
          Length = 63

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT   + KRF +    K++  +A + H + K S    R+ RG   +   +   V +
Sbjct: 1  MPKMKTVRGAAKRFKV-GKNKIKRGSAFRSHILTKMSQTRKRDLRGPQFVDKTNVAAVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|254281880|ref|ZP_04956848.1| ribosomal protein L35 [gamma proteobacterium NOR51-B]
 gi|219678083|gb|EED34432.1| ribosomal protein L35 [gamma proteobacterium NOR51-B]
          Length = 69

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++  +D   + R
Sbjct: 6  MPKAKIHSGAAKRFKKTAGG-YKRKSAYKSHILTKMTTKRKRQLRGTSMVDQSDKVLIDR 64

Query: 61 NY 62
            
Sbjct: 65 ML 66


>gi|269119784|ref|YP_003307961.1| ribosomal protein L35 [Sebaldella termitidis ATCC 33386]
 gi|268613662|gb|ACZ08030.1| ribosomal protein L35 [Sebaldella termitidis ATCC 33386]
          Length = 68

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 32/63 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+S K        +      ++K+ +
Sbjct: 1  MPKMKTHKGTKKRVKVTGTGKFMLRHSGKSHILTKKSKKRKNRLGKDIEAPVGGSRKIAK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|28378230|ref|NP_785122.1| ribosomal protein L35 [Lactobacillus plantarum WCFS1]
 gi|254556437|ref|YP_003062854.1| ribosomal protein L35 [Lactobacillus plantarum JDM1]
 gi|300767161|ref|ZP_07077073.1| 50S ribosomal protein L35 [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308180381|ref|YP_003924509.1| ribosomal protein L35 [Lactobacillus plantarum subsp. plantarum
          ST-III]
 gi|38258529|sp|Q88WU7|RL35_LACPL RecName: Full=50S ribosomal protein L35
 gi|28271065|emb|CAD63970.1| ribosomal protein L35 [Lactobacillus plantarum WCFS1]
 gi|254045364|gb|ACT62157.1| ribosomal protein L35 [Lactobacillus plantarum JDM1]
 gi|300494980|gb|EFK30136.1| 50S ribosomal protein L35 [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308045872|gb|ADN98415.1| ribosomal protein L35 [Lactobacillus plantarum subsp. plantarum
          ST-III]
          Length = 64

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTN ++ KRF +TA GK+++  A   H    ++ K  R  RGT ++     K   +
Sbjct: 1  MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|325957292|ref|YP_004292704.1| 50S ribosomal protein L35 [Lactobacillus acidophilus 30SC]
 gi|325333857|gb|ADZ07765.1| 50S ribosomal protein L35 [Lactobacillus acidophilus 30SC]
 gi|327184022|gb|AEA32469.1| 50S ribosomal protein L35 [Lactobacillus amylovorus GRL 1118]
          Length = 66

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++S+D K++ 
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSSSDMKRIK 59


>gi|183602463|ref|ZP_02963829.1| hypothetical protein BIFLAC_05450 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|219683223|ref|YP_002469606.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          AD011]
 gi|241191183|ref|YP_002968577.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          Bl-04]
 gi|241196589|ref|YP_002970144.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          DSM 10140]
 gi|254802433|sp|B8DSQ1|RL35_BIFA0 RecName: Full=50S ribosomal protein L35
 gi|183218382|gb|EDT89027.1| hypothetical protein BIFLAC_05450 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|219620873|gb|ACL29030.1| ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          AD011]
 gi|240249575|gb|ACS46515.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          Bl-04]
 gi|240251143|gb|ACS48082.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          DSM 10140]
 gi|289177293|gb|ADC84539.1| LSU ribosomal protein L35P [Bifidobacterium animalis subsp.
          lactis BB-12]
 gi|295794176|gb|ADG33711.1| 50S ribosomal protein L35 [Bifidobacterium animalis subsp. lactis
          V9]
          Length = 63

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT +++ KR  +TATGKV    +G RH +  +S +  R  +   VL +A AKK+ 
Sbjct: 1  MPKMKTKTAAAKRVRLTATGKVMHAGSGMRHNLEHKSARKRRALKRDDVLQTAQAKKMK 59


>gi|319955801|ref|YP_004167064.1| LSU ribosomal protein l35p [Nitratifractor salsuginis DSM 16511]
 gi|319418205|gb|ADV45315.1| LSU ribosomal protein L35P [Nitratifractor salsuginis DSM 16511]
          Length = 64

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF I  +GK++   A + H + K   K  R  R    +  ADAK + 
Sbjct: 1  MPKMKSVKGAVKRFKIKKSGKIKRGTAYRSHILTKVDGKHHRQMRKPKYVDQADAKNIK 59


>gi|168061910|ref|XP_001782928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665600|gb|EDQ52279.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 74

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K+K++ +S KRF +T +GK+  + AG+ H + K+S K      G   +   D + VI
Sbjct: 7  KLKSHKASAKRFGVTGSGKITRRCAGRAHLLRKKSTKRKNRLAGKTEVKHCDWQNVI 63


>gi|281357059|ref|ZP_06243549.1| ribosomal protein L35 [Victivallis vadensis ATCC BAA-548]
 gi|281316617|gb|EFB00641.1| ribosomal protein L35 [Victivallis vadensis ATCC BAA-548]
          Length = 66

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT   + KR   T TGK R   AG RH    ++ K  R  R    + S + +++ +
Sbjct: 1  MPKLKTRKCAAKRLKETGTGKFRHHKAGGRHLKSAKNAKRRRRLRQDGAVKSTEMRRI-K 59

Query: 61 NYLPNGI 67
            LP G+
Sbjct: 60 AALPYGL 66


>gi|304439756|ref|ZP_07399654.1| 50S ribosomal protein L35 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371743|gb|EFM25351.1| 50S ribosomal protein L35 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 63

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K+++K  R  R + V++  D +++
Sbjct: 1  MAKMKTHRASAKRFKRTGSGKIKRFFAFKGHLTGKKTSKRKRKLRKSAVVSKGDQRRI 58


>gi|313890572|ref|ZP_07824200.1| ribosomal protein L35 [Streptococcus pseudoporcinus SPIN 20026]
 gi|332523889|ref|ZP_08400141.1| ribosomal protein L35 [Streptococcus porcinus str. Jelinkova 176]
 gi|313121089|gb|EFR44200.1| ribosomal protein L35 [Streptococcus pseudoporcinus SPIN 20026]
 gi|332315153|gb|EGJ28138.1| ribosomal protein L35 [Streptococcus porcinus str. Jelinkova 176]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++++ D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVSAGDFKRIK 59


>gi|224476770|ref|YP_002634376.1| 50S ribosomal protein L35 [Staphylococcus carnosus subsp.
          carnosus TM300]
 gi|254802469|sp|B9DNC5|RL35_STACT RecName: Full=50S ribosomal protein L35
 gi|222421377|emb|CAL28191.1| 50S ribosomal protein L35 [Staphylococcus carnosus subsp.
          carnosus TM300]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   TA+GK++   A   H    +S K  R  R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTASGKLKRSRAFTSHLFANKSTKQKRKLRKASLVSKSDMKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|251772032|gb|EES52604.1| Ribosomal protein L35 [Leptospirillum ferrodiazotrophum]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          +KT  ++KKRFS+T TGKV+   +GKRH M  +S+K  R+   T +L    AKKV+ N 
Sbjct: 7  LKTKRAAKKRFSLTGTGKVKFHQSGKRHLMTGKSSKRTRSL-STSILEKGQAKKVLANL 64


>gi|161507856|ref|YP_001577820.1| 50S ribosomal protein L35 [Lactobacillus helveticus DPC 4571]
 gi|260103149|ref|ZP_05753386.1| conserved hypothetical protein [Lactobacillus helveticus DSM
          20075]
 gi|172048342|sp|A8YWD3|RL35_LACH4 RecName: Full=50S ribosomal protein L35
 gi|160348845|gb|ABX27519.1| 50S ribosomal protein L35 [Lactobacillus helveticus DPC 4571]
 gi|260083059|gb|EEW67179.1| conserved hypothetical protein [Lactobacillus helveticus DSM
          20075]
 gi|328464798|gb|EGF36113.1| 50S ribosomal protein L35 [Lactobacillus helveticus MTCC 5463]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDIKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|259500521|ref|ZP_05743423.1| 50S ribosomal protein L35 [Lactobacillus iners DSM 13335]
 gi|302191211|ref|ZP_07267465.1| 50S ribosomal protein L35 [Lactobacillus iners AB-1]
 gi|309803283|ref|ZP_07697380.1| ribosomal protein L35 [Lactobacillus iners LactinV 11V1-d]
 gi|309805183|ref|ZP_07699235.1| ribosomal protein L35 [Lactobacillus iners LactinV 09V1-c]
 gi|309807118|ref|ZP_07701095.1| ribosomal protein L35 [Lactobacillus iners LactinV 03V1-b]
 gi|309808030|ref|ZP_07701949.1| ribosomal protein L35 [Lactobacillus iners LactinV 01V1-a]
 gi|309810259|ref|ZP_07704104.1| ribosomal protein L35 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871812|ref|ZP_07731900.1| ribosomal protein L35 [Lactobacillus iners LEAF 3008A-a]
 gi|312872985|ref|ZP_07733045.1| ribosomal protein L35 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874263|ref|ZP_07734297.1| ribosomal protein L35 [Lactobacillus iners LEAF 2052A-d]
 gi|312875626|ref|ZP_07735627.1| ribosomal protein L35 [Lactobacillus iners LEAF 2053A-b]
 gi|315653644|ref|ZP_07906564.1| 50S ribosomal protein L35 [Lactobacillus iners ATCC 55195]
 gi|325912060|ref|ZP_08174458.1| ribosomal protein L35 [Lactobacillus iners UPII 143-D]
 gi|325912690|ref|ZP_08175073.1| ribosomal protein L35 [Lactobacillus iners UPII 60-B]
 gi|329920151|ref|ZP_08276982.1| ribosomal protein L35 [Lactobacillus iners SPIN 1401G]
 gi|259167905|gb|EEW52400.1| 50S ribosomal protein L35 [Lactobacillus iners DSM 13335]
 gi|308164791|gb|EFO67041.1| ribosomal protein L35 [Lactobacillus iners LactinV 11V1-d]
 gi|308165417|gb|EFO67648.1| ribosomal protein L35 [Lactobacillus iners LactinV 09V1-c]
 gi|308166469|gb|EFO68671.1| ribosomal protein L35 [Lactobacillus iners LactinV 03V1-b]
 gi|308168713|gb|EFO70812.1| ribosomal protein L35 [Lactobacillus iners LactinV 01V1-a]
 gi|308169531|gb|EFO71579.1| ribosomal protein L35 [Lactobacillus iners SPIN 2503V10-D]
 gi|311088880|gb|EFQ47323.1| ribosomal protein L35 [Lactobacillus iners LEAF 2053A-b]
 gi|311090333|gb|EFQ48743.1| ribosomal protein L35 [Lactobacillus iners LEAF 2052A-d]
 gi|311091507|gb|EFQ49891.1| ribosomal protein L35 [Lactobacillus iners LEAF 2062A-h1]
 gi|311092754|gb|EFQ51110.1| ribosomal protein L35 [Lactobacillus iners LEAF 3008A-a]
 gi|315489006|gb|EFU78648.1| 50S ribosomal protein L35 [Lactobacillus iners ATCC 55195]
 gi|325476010|gb|EGC79178.1| ribosomal protein L35 [Lactobacillus iners UPII 143-D]
 gi|325478111|gb|EGC81240.1| ribosomal protein L35 [Lactobacillus iners UPII 60-B]
 gi|328936605|gb|EGG33049.1| ribosomal protein L35 [Lactobacillus iners SPIN 1401G]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  TA+G+++   A   H    ++ K  R+ R   +++++D +++ +
Sbjct: 1  MPKQKTHRASAKRFKKTASGELKRHQAYTGHRFHGKTKKQRRHLRKAAMVSASDLRRIRQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|91215266|ref|ZP_01252238.1| putative 50S ribosomal protein L35 [Psychroflexus torquis ATCC
          700755]
 gi|91186871|gb|EAS73242.1| putative 50S ribosomal protein L35 [Psychroflexus torquis ATCC
          700755]
          Length = 65

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT SS+KKRF IT TGK++ + A K H + K+S K       + ++  AD + +  
Sbjct: 1  MPKMKTKSSAKKRFKITGTGKIKRKHAFKSHILTKKSKKRKLKLTHSTLVDKADVRSIKT 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|12045049|ref|NP_072859.1| 50S ribosomal protein L35 [Mycoplasma genitalium G37]
 gi|255660202|ref|ZP_05405611.1| 50S ribosomal protein L35 [Mycoplasma genitalium G37]
 gi|1350729|sp|P47439|RL35_MYCGE RecName: Full=50S ribosomal protein L35
 gi|3844794|gb|AAC71415.1| ribosomal protein L35 [Mycoplasma genitalium G37]
 gi|166079068|gb|ABY79686.1| ribosomal protein L35 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 59

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 33/55 (60%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MKT S++ KRF +T +G+++ + A   H    +S K  R+ R    +++++ K++
Sbjct: 1  MKTKSAAVKRFKLTKSGQIKRKHAYTSHLAPHKSTKQKRHLRKQATVSNSELKRI 55


>gi|323466109|gb|ADX69796.1| 50S ribosomal protein L35 [Lactobacillus helveticus H10]
          Length = 66

 Score = 52.8 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDMKRIKQ 60

Query: 61 NYL 63
           + 
Sbjct: 61 MFA 63


>gi|77409879|ref|ZP_00786504.1| ribosomal protein L35 [Streptococcus agalactiae COH1]
 gi|77171514|gb|EAO74758.1| ribosomal protein L35 [Streptococcus agalactiae COH1]
          Length = 66

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFHAFTSHRFHGKTKKQRRHLRKATMVSSGDFKRIK 59


>gi|329895717|ref|ZP_08271121.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC3088]
 gi|328922193|gb|EGG29548.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC3088]
          Length = 64

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++  AD   V +
Sbjct: 1  MPKVKIHSGAAKRFKKTAGG-YKRKSAYKSHILTKMTTKRKRQLRGTSMIHKADKALVDK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|282882472|ref|ZP_06291093.1| ribosomal protein L35 [Peptoniphilus lacrimalis 315-B]
 gi|300813847|ref|ZP_07094152.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 836 str.
          F0141]
 gi|281297614|gb|EFA90089.1| ribosomal protein L35 [Peptoniphilus lacrimalis 315-B]
 gi|300512034|gb|EFK39229.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 836 str.
          F0141]
          Length = 63

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K++ K +R  R + +++  D K++
Sbjct: 1  MGKMKTHRASAKRFKRTGSGKIKRFFAYKGHLTGKKTAKRLRKLRKSSLVSKGDQKRI 58


>gi|241890131|ref|ZP_04777429.1| ribosomal protein L35 [Gemella haemolysans ATCC 10379]
 gi|329767185|ref|ZP_08258712.1| 50S ribosomal protein L35 [Gemella haemolysans M341]
 gi|329770370|ref|ZP_08261752.1| 50S ribosomal protein L35 [Gemella sanguinis M325]
 gi|241863753|gb|EER68137.1| ribosomal protein L35 [Gemella haemolysans ATCC 10379]
 gi|328836493|gb|EGF86153.1| 50S ribosomal protein L35 [Gemella sanguinis M325]
 gi|328836852|gb|EGF86499.1| 50S ribosomal protein L35 [Gemella haemolysans M341]
          Length = 64

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++    KR   TA+GK++   A   H   +++ K  R+ R   +++  D K++ 
Sbjct: 1  MPKMKSHRGLAKRVKKTASGKLKRSRAYTSHWFSRKTTKQKRHLRKASLVSRGDYKRIR 59


>gi|261368268|ref|ZP_05981151.1| ribosomal protein L35 [Subdoligranulum variabile DSM 15176]
 gi|282569783|gb|EFB75318.1| ribosomal protein L35 [Subdoligranulum variabile DSM 15176]
          Length = 68

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT S +KKRF +TA+GK++  A+ +RH + K++ K  R  R    +   +   V R  
Sbjct: 5  KLKTLSGAKKRFKMTASGKIKRNASKRRHILTKKTTKLTRGLRMPKYVDKTNEATV-RKM 63

Query: 63 LPNG 66
          +P G
Sbjct: 64 MPYG 67


>gi|168060473|ref|XP_001782220.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666313|gb|EDQ52971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 70

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K+K++ +S KRF +T +GK+  + AG+ H + K+S K      G   +   D + VI
Sbjct: 3  KLKSHKASAKRFGVTGSGKITRRCAGRAHLLRKKSTKRKNRLAGKTEVKHCDWQNVI 59


>gi|46446337|ref|YP_007702.1| 50S ribosomal protein L35 [Candidatus Protochlamydia amoebophila
          UWE25]
 gi|54036262|sp|Q6MDC2|RL35_PARUW RecName: Full=50S ribosomal protein L35
 gi|46399978|emb|CAF23427.1| probable 50S ribosomal protein L35 [Candidatus Protochlamydia
          amoebophila UWE25]
          Length = 64

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  +   +F +TATGK++A   G+RH +  ++ K  R  R   ++     K   R
Sbjct: 1  MPKMKTRKAVASKFRVTATGKLKASRPGRRHKLTGKTPKRKRQLRRPGLVDDGHLKTYKR 60

Query: 61 NY 62
            
Sbjct: 61 LM 62


>gi|55823055|ref|YP_141496.1| 50S ribosomal protein L35 [Streptococcus thermophilus CNRZ1066]
 gi|116627859|ref|YP_820478.1| 50S ribosomal protein L35 [Streptococcus thermophilus LMD-9]
 gi|81676559|sp|Q5LZL8|RL35_STRT1 RecName: Full=50S ribosomal protein L35
 gi|122267544|sp|Q03KJ0|RL35_STRTD RecName: Full=50S ribosomal protein L35
 gi|55739040|gb|AAV62681.1| 50S ribosomal protein L35 [Streptococcus thermophilus CNRZ1066]
 gi|116101136|gb|ABJ66282.1| LSU ribosomal protein L35P [Streptococcus thermophilus LMD-9]
 gi|312278440|gb|ADQ63097.1| 50S ribosomal protein L35 [Streptococcus thermophilus ND03]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 30/59 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++   D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVHPGDFKRIK 59


>gi|329116572|ref|ZP_08245289.1| ribosomal protein L35 [Streptococcus parauberis NCFD 2020]
 gi|326906977|gb|EGE53891.1| ribosomal protein L35 [Streptococcus parauberis NCFD 2020]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKATMVSSGDFKRIK 59


>gi|13507855|ref|NP_109804.1| 50S ribosomal protein L35 [Mycoplasma pneumoniae M129]
 gi|2500338|sp|P75447|RL35_MYCPN RecName: Full=50S ribosomal protein L35
 gi|11379448|gb|AAG34733.1|AE000004_2 ribosomal protein L35 [Mycoplasma pneumoniae M129]
 gi|301633268|gb|ADK86822.1| ribosomal protein L35 [Mycoplasma pneumoniae FH]
          Length = 59

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 33/55 (60%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MK  S++KKRF +T +G+++ + A   H    ++ K  R+ R    ++++D K++
Sbjct: 1  MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRI 55


>gi|221054420|ref|XP_002258349.1| 50s ribosomal protein l35 [Plasmodium knowlesi strain H]
 gi|193808418|emb|CAQ39121.1| 50s ribosomal protein l35, putative [Plasmodium knowlesi strain H]
          Length = 163

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN S  KRF IT  GK+  + AG+ H + K+++    + R T  +AS+   ++++ Y
Sbjct: 101 KPKTNKSIAKRFKITKNGKLIRKKAGRNHMLRKKTSSNKASLRKTTTIASS---RIVKKY 157


>gi|254508883|ref|ZP_05120992.1| ribosomal protein L35 [Vibrio parahaemolyticus 16]
 gi|219548197|gb|EED25213.1| ribosomal protein L35 [Vibrio parahaemolyticus 16]
          Length = 61

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L   +   V R  L
Sbjct: 1  MKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILPKCEVAAVAR-ML 58

Query: 64 PN 65
          P 
Sbjct: 59 PY 60


>gi|322372880|ref|ZP_08047416.1| ribosomal protein L35 [Streptococcus sp. C150]
 gi|321277922|gb|EFX54991.1| ribosomal protein L35 [Streptococcus sp. C150]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASLVHSGDFKRIK 59


>gi|299144127|ref|ZP_07037207.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 386 str.
          F0131]
 gi|298518612|gb|EFI42351.1| ribosomal protein L35 [Peptoniphilus sp. oral taxon 386 str.
          F0131]
          Length = 63

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K++ K +R  R + +++  D +++
Sbjct: 1  MGKMKTHRASAKRFKRTGSGKLKRGYAFKGHLTGKKTAKRLRKLRKSSLVSKGDQRRI 58


>gi|104774347|ref|YP_619327.1| 50S ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus ATCC 11842]
 gi|116514442|ref|YP_813348.1| 50S ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus ATCC BAA-365]
 gi|300813178|ref|ZP_07093552.1| ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus PB2003/044-T3-4]
 gi|313124182|ref|YP_004034441.1| 50S ribosomal protein l35 [Lactobacillus delbrueckii subsp.
          bulgaricus ND02]
 gi|122274826|sp|Q049G2|RL35_LACDB RecName: Full=50S ribosomal protein L35
 gi|148887078|sp|Q1G9B3|RL35_LACDA RecName: Full=50S ribosomal protein L35
 gi|103423428|emb|CAI98301.1| 50S Ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus ATCC 11842]
 gi|116093757|gb|ABJ58910.1| LSU ribosomal protein L35P [Lactobacillus delbrueckii subsp.
          bulgaricus ATCC BAA-365]
 gi|300495836|gb|EFK30984.1| ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus PB2003/044-T3-4]
 gi|312280745|gb|ADQ61464.1| 50S ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus ND02]
 gi|325126142|gb|ADY85472.1| 50S ribosomal protein L35 [Lactobacillus delbrueckii subsp.
          bulgaricus 2038]
 gi|325685796|gb|EGD27869.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Lactobacillus
          delbrueckii subsp. lactis DSM 20072]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  T  G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKMKTHRASAKRFKRTGNGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDLKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|15618899|ref|NP_225185.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae CWL029]
 gi|15836522|ref|NP_301046.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae J138]
 gi|16752036|ref|NP_445402.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae AR39]
 gi|33242360|ref|NP_877301.1| 50S ribosomal protein L35 [Chlamydophila pneumoniae TW-183]
 gi|7674323|sp|Q9Z6R8|RL35_CHLPN RecName: Full=50S ribosomal protein L35
 gi|4377319|gb|AAD19128.1| L35 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|7189776|gb|AAF38653.1| ribosomal protein L35 [Chlamydophila pneumoniae AR39]
 gi|8979364|dbj|BAA99198.1| L35 ribosomal protein [Chlamydophila pneumoniae J138]
 gi|33236871|gb|AAP98958.1| ribosomal protein L35 [Chlamydophila pneumoniae TW-183]
 gi|269302792|gb|ACZ32892.1| ribosomal protein L35 [Chlamydophila pneumoniae LPCoLN]
          Length = 64

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S   RF +TA+G+++    GKRH + K+S++  RN     ++         R
Sbjct: 1  MPKMKTNKSVSARFKLTASGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|300781275|ref|ZP_07091129.1| 50S ribosomal protein L35 [Corynebacterium genitalium ATCC 33030]
 gi|300532982|gb|EFK54043.1| 50S ribosomal protein L35 [Corynebacterium genitalium ATCC 33030]
          Length = 64

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+  + KR  +T +GK+R + AGKRH   K S K  R   GT  +A  D K+  R  
Sbjct: 2  KQKTHKGTAKRIKVTGSGKLRREQAGKRHLNEKLSAKRRRKLSGTTDVAKGDVKRTKRLL 61


>gi|15673825|ref|NP_268000.1| 50S ribosomal protein L35 [Lactococcus lactis subsp. lactis
          Il1403]
 gi|281492455|ref|YP_003354435.1| 50S ribosomal protein L35P [Lactococcus lactis subsp. lactis
          KF147]
 gi|20139701|sp|Q9CEJ8|RL35_LACLA RecName: Full=50S ribosomal protein L35
 gi|12724873|gb|AAK05941.1|AE006414_7 50S ribosomal protein L35 [Lactococcus lactis subsp. lactis
          Il1403]
 gi|281376119|gb|ADA65610.1| LSU ribosomal protein L35P [Lactococcus lactis subsp. lactis
          KF147]
 gi|326407334|gb|ADZ64405.1| 50S ribosomal protein L35P [Lactococcus lactis subsp. lactis
          CV56]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  T  G ++   A   H    ++ K  R  R + +++  D K++ R
Sbjct: 1  MPKQKTHRASAKRFKRTGNGGLKRFRAYTSHRFHGKTVKQRRQLRKSSMVSKGDFKRIRR 60


>gi|107102273|ref|ZP_01366191.1| hypothetical protein PaerPA_01003330 [Pseudomonas aeruginosa
          PACS2]
          Length = 61

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MKT S + KRF  TA G ++ + A K H + K + K  R  RGT +L  +D  +V R+ 
Sbjct: 1  MKTKSGAAKRFKKTAGG-LKHKHAFKSHILTKMTTKRKRQLRGTSMLNKSDVARVERSL 58


>gi|313885156|ref|ZP_07818908.1| ribosomal protein L35 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619847|gb|EFR31284.1| ribosomal protein L35 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 65

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ ++ KR   T +GK++   A   H    ++ K  R  R   +++++D K++ 
Sbjct: 1  MPKQKTHRATAKRVKRTGSGKLKRGRAFTSHRFHGKTKKQRRQLRKASLVSASDYKRIK 59


>gi|317495088|ref|ZP_07953459.1| ribosomal protein L35 [Gemella moribillum M424]
 gi|316914795|gb|EFV36270.1| ribosomal protein L35 [Gemella moribillum M424]
          Length = 64

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++    KR   TA GK++   A   H   +++ K  R+ R   +++  D K++ 
Sbjct: 1  MPKMKSHRGLAKRVKKTANGKLKRSRAYTSHWFSRKTTKQKRHLRKASLVSRGDYKRIR 59


>gi|189095340|ref|YP_001936353.1| 50S ribosomal protein L35 [Heterosigma akashiwo]
 gi|157694683|gb|ABV65959.1| 50S ribosomal protein L35 [Heterosigma akashiwo]
 gi|157777914|gb|ABV70100.1| 50S ribosomal protein L35 [Heterosigma akashiwo]
          Length = 64

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KR+  TA  K   + A K H + K+S    R    T ++++AD K + +
Sbjct: 1  MPKLKTRRAALKRYKKTANQKFLRRKAFKSHILTKKSANRKRKLSKTAIVSNADIKNIKK 60

Query: 61 NYL 63
            L
Sbjct: 61 MLL 63


>gi|226320902|ref|ZP_03796453.1| ribosomal protein L35 [Borrelia burgdorferi 29805]
 gi|226233674|gb|EEH32404.1| ribosomal protein L35 [Borrelia burgdorferi 29805]
 gi|312149675|gb|ADQ29746.1| ribosomal protein L35 [Borrelia burgdorferi N40]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT  S+KKR+S T   KV+ +    RH + K+S+K  RN R +  L+  + K++ +  
Sbjct: 4  KMKTRKSAKKRYSFTVNSKVKYKKQNLRHILTKKSSKRKRNLRKSGNLSCFEVKRI-KTL 62

Query: 63 LPNG 66
          LP G
Sbjct: 63 LPYG 66


>gi|326331230|ref|ZP_08197524.1| ribosomal protein L35 [Nocardioidaceae bacterium Broad-1]
 gi|325951000|gb|EGD43046.1| ribosomal protein L35 [Nocardioidaceae bacterium Broad-1]
          Length = 70

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGM------IKRSNKFIRNARGTMVLASAD 54
          MPK KT+S SKKRF +T +GK++   AG++ G          S K  R   G + LA AD
Sbjct: 1  MPKNKTHSGSKKRFKVTGSGKIQRLQAGRKSGAAFASAPTTGSRKKHRRNAGLVELAPAD 60

Query: 55 AKKVIRNY 62
           K+  +  
Sbjct: 61 VKRAKKLL 68


>gi|58337802|ref|YP_194387.1| 50S ribosomal protein L35 [Lactobacillus acidophilus NCFM]
 gi|227904451|ref|ZP_04022256.1| 50S ribosomal protein L35 [Lactobacillus acidophilus ATCC 4796]
 gi|75507559|sp|Q5FIW8|RL35_LACAC RecName: Full=50S ribosomal protein L35
 gi|58255119|gb|AAV43356.1| 50s ribosomal RL35 [Lactobacillus acidophilus NCFM]
 gi|227867826|gb|EEJ75247.1| 50S ribosomal protein L35 [Lactobacillus acidophilus ATCC 4796]
          Length = 66

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ 
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKPAMVSRSDMKRIK 59


>gi|222152874|ref|YP_002562051.1| 50S ribosomal protein L35 [Streptococcus uberis 0140J]
 gi|254802473|sp|B9DU41|RL35_STRU0 RecName: Full=50S ribosomal protein L35
 gi|222113687|emb|CAR41625.1| 50S ribosomal protein L35 [Streptococcus uberis 0140J]
          Length = 66

 Score = 52.0 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVSSGDFKRIK 59


>gi|134106911|ref|XP_777768.1| hypothetical protein CNBA4660 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260466|gb|EAL23121.1| hypothetical protein CNBA4660 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 107

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+K++S+SKKRF   A+G  +   AGK H     S   +      + + +  AKK+ +  
Sbjct: 45  KLKSHSASKKRFFPNASGMFKRAQAGKSHLNTPFSPSKVNRLAKGVYVTNTQAKKLKK-L 103

Query: 63  LPN 65
           LP 
Sbjct: 104 LPF 106


>gi|149371734|ref|ZP_01891150.1| 50S ribosomal protein L35 [unidentified eubacterium SCB49]
 gi|149355361|gb|EDM43921.1| 50S ribosomal protein L35 [unidentified eubacterium SCB49]
          Length = 65

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT SS+KKRF +T TGK++ + A K H + K+S K         ++  AD   + +
Sbjct: 1  MPKQKTKSSAKKRFKLTGTGKIKRKHAFKSHILTKKSKKRKLKLTHDGLVHKADESNIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|125718310|ref|YP_001035443.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK36]
 gi|323351273|ref|ZP_08086929.1| 50S ribosomal protein L35 [Streptococcus sanguinis VMC66]
 gi|166233042|sp|A3CNY8|RL35_STRSV RecName: Full=50S ribosomal protein L35
 gi|125498227|gb|ABN44893.1| 50S ribosomal protein L35, putative [Streptococcus sanguinis
          SK36]
 gi|322122497|gb|EFX94208.1| 50S ribosomal protein L35 [Streptococcus sanguinis VMC66]
 gi|324991556|gb|EGC23489.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK353]
 gi|324993917|gb|EGC25836.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK405]
 gi|324994764|gb|EGC26677.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK678]
 gi|325687203|gb|EGD29225.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK72]
 gi|325690866|gb|EGD32867.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK115]
 gi|325694911|gb|EGD36816.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK150]
 gi|325696066|gb|EGD37957.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK160]
 gi|327461074|gb|EGF07407.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1057]
 gi|327463179|gb|EGF09500.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1]
 gi|327470711|gb|EGF16167.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK330]
 gi|327474788|gb|EGF20193.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK408]
 gi|327489895|gb|EGF21684.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1058]
 gi|328946545|gb|EGG40684.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1087]
 gi|332359450|gb|EGJ37270.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK355]
 gi|332361941|gb|EGJ39743.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK49]
 gi|332362513|gb|EGJ40313.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1056]
 gi|332367206|gb|EGJ44942.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK1059]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ + D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKAGMVHAGDFKRIK 59


>gi|146318923|ref|YP_001198635.1| 50S ribosomal protein L35 [Streptococcus suis 05ZYH33]
 gi|146321130|ref|YP_001200841.1| 50S ribosomal protein L35 [Streptococcus suis 98HAH33]
 gi|253751997|ref|YP_003025138.1| 50S ribosomal protein L35 [Streptococcus suis SC84]
 gi|253753822|ref|YP_003026963.1| 50S ribosomal protein L35 [Streptococcus suis P1/7]
 gi|253755302|ref|YP_003028442.1| 50S ribosomal protein L35 [Streptococcus suis BM407]
 gi|330832532|ref|YP_004401357.1| 50S ribosomal protein L35 [Streptococcus suis ST3]
 gi|166233041|sp|A4W252|RL35_STRS2 RecName: Full=50S ribosomal protein L35
 gi|166233043|sp|A4VVU6|RL35_STRSY RecName: Full=50S ribosomal protein L35
 gi|145689729|gb|ABP90235.1| 50S ribosomal protein L35 [Streptococcus suis 05ZYH33]
 gi|145691936|gb|ABP92441.1| 50S ribosomal protein L35 [Streptococcus suis 98HAH33]
 gi|251816286|emb|CAZ51914.1| 50S ribosomal protein L35 [Streptococcus suis SC84]
 gi|251817766|emb|CAZ55518.1| 50S ribosomal protein L35 [Streptococcus suis BM407]
 gi|251820068|emb|CAR46322.1| 50S ribosomal protein L35 [Streptococcus suis P1/7]
 gi|292558579|gb|ADE31580.1| 50S ribosomal protein L35 [Streptococcus suis GZ1]
 gi|319758363|gb|ADV70305.1| 50S ribosomal protein L35 [Streptococcus suis JS14]
 gi|329306755|gb|AEB81171.1| 50S ribosomal protein L35 [Streptococcus suis ST3]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ + D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKAGMVHAGDFKRIK 59


>gi|171779890|ref|ZP_02920794.1| hypothetical protein STRINF_01677 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
 gi|288905559|ref|YP_003430781.1| ribosomal protein L35 [Streptococcus gallolyticus UCN34]
 gi|306831647|ref|ZP_07464804.1| 50S ribosomal protein L35 [Streptococcus gallolyticus subsp.
          gallolyticus TX20005]
 gi|306833789|ref|ZP_07466914.1| 50S ribosomal protein L35 [Streptococcus bovis ATCC 700338]
 gi|320547006|ref|ZP_08041307.1| 50S ribosomal protein L35 [Streptococcus equinus ATCC 9812]
 gi|325978550|ref|YP_004288266.1| 50S ribosomal protein L35 [Streptococcus gallolyticus subsp.
          gallolyticus ATCC BAA-2069]
 gi|171281238|gb|EDT46673.1| hypothetical protein STRINF_01677 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
 gi|288732285|emb|CBI13852.1| ribosomal protein L35 [Streptococcus gallolyticus UCN34]
 gi|304423983|gb|EFM27124.1| 50S ribosomal protein L35 [Streptococcus bovis ATCC 700338]
 gi|304426072|gb|EFM29187.1| 50S ribosomal protein L35 [Streptococcus gallolyticus subsp.
          gallolyticus TX20005]
 gi|320448408|gb|EFW89150.1| 50S ribosomal protein L35 [Streptococcus equinus ATCC 9812]
 gi|325178478|emb|CBZ48522.1| 50S ribosomal protein L35 [Streptococcus gallolyticus subsp.
          gallolyticus ATCC BAA-2069]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAAMVHSGDFKRIK 59


>gi|29840527|ref|NP_829633.1| 50S ribosomal protein L35 [Chlamydophila caviae GPIC]
 gi|62185351|ref|YP_220136.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
 gi|89898051|ref|YP_515161.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
 gi|332287695|ref|YP_004422596.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
 gi|33301613|sp|Q822B3|RL35_CHLCV RecName: Full=50S ribosomal protein L35
 gi|81312498|sp|Q5L5A6|RL35_CHLAB RecName: Full=50S ribosomal protein L35
 gi|148840414|sp|Q255M2|RL35_CHLFF RecName: Full=50S ribosomal protein L35
 gi|29834876|gb|AAP05511.1| ribosomal protein L35 [Chlamydophila caviae GPIC]
 gi|62148418|emb|CAH64185.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
 gi|89331423|dbj|BAE81016.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
 gi|325507122|gb|ADZ18760.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
 gi|328914948|gb|AEB55781.1| ribosomal protein L35 [Chlamydophila psittaci 6BC]
          Length = 64

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N S   RF +T +G+++    GKRH + K+S++  RN     ++         R
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|227877777|ref|ZP_03995810.1| 50S ribosomal protein L35 [Lactobacillus crispatus JV-V01]
 gi|256843628|ref|ZP_05549116.1| 50S ribosomal protein L35 [Lactobacillus crispatus 125-2-CHN]
 gi|256850104|ref|ZP_05555534.1| 50s ribosomal RL35 [Lactobacillus crispatus MV-1A-US]
 gi|262047392|ref|ZP_06020349.1| 50S ribosomal protein L35 [Lactobacillus crispatus MV-3A-US]
 gi|293380737|ref|ZP_06626785.1| 50S ribosomal protein L35 [Lactobacillus crispatus 214-1]
 gi|295693378|ref|YP_003601988.1| 50S ribosomal protein l35 [Lactobacillus crispatus ST1]
 gi|227862636|gb|EEJ70122.1| 50S ribosomal protein L35 [Lactobacillus crispatus JV-V01]
 gi|256615048|gb|EEU20249.1| 50S ribosomal protein L35 [Lactobacillus crispatus 125-2-CHN]
 gi|256713076|gb|EEU28067.1| 50s ribosomal RL35 [Lactobacillus crispatus MV-1A-US]
 gi|260572366|gb|EEX28929.1| 50S ribosomal protein L35 [Lactobacillus crispatus MV-3A-US]
 gi|290922701|gb|EFD99655.1| 50S ribosomal protein L35 [Lactobacillus crispatus 214-1]
 gi|295031484|emb|CBL50963.1| 50S ribosomal protein L35 [Lactobacillus crispatus ST1]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ 
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSKSDMKRIK 59


>gi|118573004|sp|Q480B1|RL35_COLP3 RecName: Full=50S ribosomal protein L35
          Length = 64

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF  TA+G  + + AG RH + KR  K  R+ R   ++A++D K V +
Sbjct: 1  MPKMKTNKGAAKRFKKTASG-YKFKQAGLRHILTKRRTKVKRHLRAKCMIAASDIKSVKK 59

Query: 61 NY 62
            
Sbjct: 60 LL 61


>gi|15807001|ref|NP_295728.1| 50S ribosomal protein L35 [Deinococcus radiodurans R1]
 gi|20139838|sp|Q9RSW6|RL35_DEIRA RecName: Full=50S ribosomal protein L35
 gi|51247400|pdb|1SM1|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Quinupristin And Dalfopristin
 gi|190613516|pdb|2ZJP|3 Chain 3, Thiopeptide Antibiotic Nosiheptide Bound To The Large
          Ribosomal Subunit Of Deinococcus Radiodurans
 gi|190613546|pdb|2ZJQ|3 Chain 3, Interaction Of L7 With L11 Induced By Microccocin
          Binding To The Deinococcus Radiodurans 50s Subunit
 gi|190613577|pdb|2ZJR|3 Chain 3, Refined Native Structure Of The Large Ribosomal Subunit
          (50s) From Deinococcus Radiodurans
 gi|190613684|pdb|3CF5|3 Chain 3, Thiopeptide Antibiotic Thiostrepton Bound To The Large
          Ribosomal Subunit Of Deinococcus Radiodurans
 gi|203282483|pdb|3DLL|3 Chain 3, The Oxazolidinone Antibiotics Perturb The Ribosomal
          Peptidyl-Transferase Center And Effect Trna Positioning
 gi|323714567|pdb|3PIO|3 Chain 3, Crystal Structure Of The Synergistic Antibiotic Pair
          Lankamycin And Lankacidin In Complex With The Large
          Ribosomal Subunit
 gi|323714597|pdb|3PIP|3 Chain 3, Crystal Structure Of The Synergistic Antibiotic Pair
          Lankamycin And Lankacidin In Complex With The Large
          Ribosomal Subunit
 gi|6459793|gb|AAF11554.1|AE002038_3 ribosomal protein L35 [Deinococcus radiodurans R1]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++
Sbjct: 1  MPKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LMLPRG 65


>gi|223984492|ref|ZP_03634625.1| hypothetical protein HOLDEFILI_01919 [Holdemania filiformis DSM
          12042]
 gi|223963563|gb|EEF67942.1| hypothetical protein HOLDEFILI_01919 [Holdemania filiformis DSM
          12042]
          Length = 64

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  +  KR   T +GK++   A   H    +++K     R + ++   D K++ 
Sbjct: 1  MPKMKTKKALAKRVKRTGSGKLKRSHAYISHFAANKTHKQKVQLRKSALVDKTDMKRIK 59


>gi|315924322|ref|ZP_07920545.1| 50S ribosomal protein L35 [Pseudoramibacter alactolyticus ATCC
          23263]
 gi|315622393|gb|EFV02351.1| 50S ribosomal protein L35 [Pseudoramibacter alactolyticus ATCC
          23263]
          Length = 64

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  S KRF I  +G ++   A K H + K++ K  R  R    L  ++AK + +
Sbjct: 1  MPKMKSHRGSAKRFKIKKSGVIKRAKAYKSHILNKKTQKRKRKLRKAGYLVPSNAKNIRK 60

Query: 61 NYL 63
            L
Sbjct: 61 MLL 63


>gi|116512719|ref|YP_811626.1| 50S ribosomal protein L35 [Lactococcus lactis subsp. cremoris
          SK11]
 gi|125624803|ref|YP_001033286.1| 50S ribosomal protein L35 [Lactococcus lactis subsp. cremoris
          MG1363]
 gi|122939999|sp|Q02X09|RL35_LACLS RecName: Full=50S ribosomal protein L35
 gi|166231192|sp|A2RMR2|RL35_LACLM RecName: Full=50S ribosomal protein L35
 gi|116108373|gb|ABJ73513.1| LSU ribosomal protein L35P [Lactococcus lactis subsp. cremoris
          SK11]
 gi|124493611|emb|CAL98598.1| 50S ribosomal protein L35 [Lactococcus lactis subsp. cremoris
          MG1363]
 gi|300071602|gb|ADJ61002.1| 50S ribosomal protein L35 [Lactococcus lactis subsp. cremoris
          NZ9000]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  T  G ++   A   H    +S K  R  R   +++  D K++ R
Sbjct: 1  MPKQKTHRASAKRFKRTGNGGLKRFRAYTSHRFHGKSVKQRRQLRKASMVSKGDFKRIRR 60


>gi|331701568|ref|YP_004398527.1| 50S ribosomal protein L35 [Lactobacillus buchneri NRRL B-30929]
 gi|329128911|gb|AEB73464.1| 50S ribosomal protein L35 [Lactobacillus buchneri NRRL B-30929]
          Length = 65

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTN ++ KRF  TA G  ++  A   H    ++ K  R  RGT ++   + K   +
Sbjct: 1  MPKQKTNRAAAKRFKRTANGGFKSANAYTSHRFHGKTKKQRRQLRGTSMMDKTNIKTYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|70726247|ref|YP_253161.1| 50S ribosomal protein L35 [Staphylococcus haemolyticus JCSC1435]
 gi|228475212|ref|ZP_04059938.1| ribosomal protein L35 [Staphylococcus hominis SK119]
 gi|314936216|ref|ZP_07843563.1| ribosomal protein L35 [Staphylococcus hominis subsp. hominis C80]
 gi|82581590|sp|Q4L720|RL35_STAHJ RecName: Full=50S ribosomal protein L35
 gi|68446971|dbj|BAE04555.1| 50S ribosomal protein L35 [Staphylococcus haemolyticus JCSC1435]
 gi|228270823|gb|EEK12225.1| ribosomal protein L35 [Staphylococcus hominis SK119]
 gi|313654835|gb|EFS18580.1| ribosomal protein L35 [Staphylococcus hominis subsp. hominis C80]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KR   T +G+++   A   H    ++ K  R  R   +++ +D K+V +
Sbjct: 1  MPKMKTHRGAAKRVKRTGSGQLKRSRAFTSHLFANKNTKQKRKLRKAKLVSKSDMKRVKQ 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|294101706|ref|YP_003553564.1| ribosomal protein L35 [Aminobacterium colombiense DSM 12261]
 gi|293616686|gb|ADE56840.1| ribosomal protein L35 [Aminobacterium colombiense DSM 12261]
          Length = 65

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K++S +KKRFS T TGK   +  G+ H +  +S   +R  R T  +    A  + +
Sbjct: 1  MPKLKSHSGAKKRFSSTGTGKFSYRKNGRGHLLTGKSRSRLRRLRKTGYVPETLAGDLKK 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 -LLPY 64


>gi|77360341|ref|YP_339916.1| 50S ribosomal subunit protein A [Pseudoalteromonas haloplanktis
          TAC125]
 gi|315126515|ref|YP_004068518.1| 50S ribosomal subunit protein A [Pseudoalteromonas sp. SM9913]
 gi|148887095|sp|Q3IL79|RL35_PSEHT RecName: Full=50S ribosomal protein L35
 gi|76875252|emb|CAI86473.1| 50S ribosomal subunit protein A [Pseudoalteromonas haloplanktis
          TAC125]
 gi|315015029|gb|ADT68367.1| 50S ribosomal subunit protein A [Pseudoalteromonas sp. SM9913]
          Length = 66

 Score = 52.0 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K++  + KRF  TA+G  + + A  RH + K+++K   + R  M++   D   V R  
Sbjct: 4  KLKSHRGAAKRFKKTASGGFKRKQAHLRHILTKKTSKRKLHLRPKMMVHKNDHGLVSRML 63


>gi|315221377|ref|ZP_07863298.1| ribosomal protein L35 [Streptococcus anginosus F0211]
 gi|319939328|ref|ZP_08013688.1| 50S ribosomal protein L35 [Streptococcus anginosus 1_2_62CV]
 gi|315189496|gb|EFU23190.1| ribosomal protein L35 [Streptococcus anginosus F0211]
 gi|319811314|gb|EFW07609.1| 50S ribosomal protein L35 [Streptococcus anginosus 1_2_62CV]
          Length = 66

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKAAMVHSGDFKRIK 59


>gi|28948947|pdb|1NKW|3 Chain 3, Crystal Structure Of The Large Ribosomal Subunit From
          Deinococcus Radiodurans
 gi|66361049|pdb|1YL3|8 Chain 8, Crystal Structure Of 70s Ribosome With Thrs Operator And
          Trnas. Large Subunit. The Coordinates For The Small
          Subunit Are In The Pdb Entry 1yl4.
 gi|88192286|pdb|2B66|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of
          Release Factor Rf1, Trnas And Mrna Bound To The
          Ribosome. This File Contains The 50s Subunit From A
          Crystal Structure Of Release Factor Rf1, Trnas And Mrna
          Bound To The Ribosome And Is Described In Remark 400
 gi|88192349|pdb|2B9N|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of
          Release Factor Rf2, Trnas And Mrna Bound To The
          Ribosome. This File Contains The 50s Subunit From A
          Crystal Structure Of Release Factor Rf1, Trnas And Mrna
          Bound To The Ribosome And Is Described In Remark 400.
 gi|88192404|pdb|2B9P|8 Chain 8, 50s Ribosomal Subunit From A Crystal Structure Of The
          Ribosome In Complex With Trnas And Mrna With A Stop
          Codon In The A-Site. This File Contains The 50s Subunit
          From A Crystal Structure Of The Ribosome In Complex
          With Trnas And Mrna With A Stop Codon In The A-Site And
          Is Described In Remark 400
          Length = 64

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++
Sbjct: 1  MPKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MK 59

Query: 61 NYLP 64
            LP
Sbjct: 60 LMLP 63


>gi|322385725|ref|ZP_08059369.1| 50S ribosomal protein L35 [Streptococcus cristatus ATCC 51100]
 gi|321270463|gb|EFX53379.1| 50S ribosomal protein L35 [Streptococcus cristatus ATCC 51100]
          Length = 66

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ + D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKASMVHAGDFKRIK 59


>gi|148270332|ref|YP_001244792.1| 50S ribosomal protein L35 [Thermotoga petrophila RKU-1]
 gi|281412637|ref|YP_003346716.1| ribosomal protein L35 [Thermotoga naphthophila RKU-10]
 gi|166233048|sp|A5ILZ3|RL35_THEP1 RecName: Full=50S ribosomal protein L35
 gi|147735876|gb|ABQ47216.1| LSU ribosomal protein L35P [Thermotoga petrophila RKU-1]
 gi|281373740|gb|ADA67302.1| ribosomal protein L35 [Thermotoga naphthophila RKU-10]
          Length = 65

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF IT  GK+    A + H   K+    +R  R   V++S D  +++R
Sbjct: 1  MPKMKTNRSAAKRFRITKNGKIMRNHAYRSHKTGKKRRNTLRELRKKDVVSSTDKYRILR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|42519517|ref|NP_965447.1| 50S ribosomal protein L35 [Lactobacillus johnsonii NCC 533]
 gi|116630036|ref|YP_815208.1| 50S ribosomal protein L35 [Lactobacillus gasseri ATCC 33323]
 gi|227889530|ref|ZP_04007335.1| 50S ribosomal protein L35 [Lactobacillus johnsonii ATCC 33200]
 gi|238853777|ref|ZP_04644143.1| ribosomal protein L35 [Lactobacillus gasseri 202-4]
 gi|268319906|ref|YP_003293562.1| ribosomal protein L35 [Lactobacillus johnsonii FI9785]
 gi|282851344|ref|ZP_06260709.1| ribosomal protein L35 [Lactobacillus gasseri 224-1]
 gi|300361201|ref|ZP_07057378.1| 50S ribosomal protein L35 [Lactobacillus gasseri JV-V03]
 gi|311110335|ref|ZP_07711732.1| ribosomal protein L35 [Lactobacillus gasseri MV-22]
 gi|54036277|sp|Q74IC5|RL35_LACJO RecName: Full=50S ribosomal protein L35
 gi|122273027|sp|Q041V2|RL35_LACGA RecName: Full=50S ribosomal protein L35
 gi|41583806|gb|AAS09413.1| 50S ribosomal protein L35 [Lactobacillus johnsonii NCC 533]
 gi|116095618|gb|ABJ60770.1| LSU ribosomal protein L35P [Lactobacillus gasseri ATCC 33323]
 gi|227850008|gb|EEJ60094.1| 50S ribosomal protein L35 [Lactobacillus johnsonii ATCC 33200]
 gi|238833586|gb|EEQ25857.1| ribosomal protein L35 [Lactobacillus gasseri 202-4]
 gi|262398281|emb|CAX67295.1| ribosomal protein L35 [Lactobacillus johnsonii FI9785]
 gi|282557312|gb|EFB62909.1| ribosomal protein L35 [Lactobacillus gasseri 224-1]
 gi|300353820|gb|EFJ69691.1| 50S ribosomal protein L35 [Lactobacillus gasseri JV-V03]
 gi|311065489|gb|EFQ45829.1| ribosomal protein L35 [Lactobacillus gasseri MV-22]
 gi|329667756|gb|AEB93704.1| 50S ribosomal protein L35 [Lactobacillus johnsonii DPC 6026]
          Length = 66

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++++D K++ +
Sbjct: 1  MPKQKTHRASAKRFKRTANGGLKRHHAYTGHRFHGKTKKQRRHLRKAAMVSASDLKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|124506705|ref|XP_001351950.1| apicoplast ribosomal protein L35 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|23504978|emb|CAD51761.1| apicoplast ribosomal protein L35 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 191

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN S  KRF +T  GK+  +  G+ H + K+++    + R T  +   D+ ++ + Y
Sbjct: 129 KPKTNKSIAKRFKLTKNGKLIRKKPGRNHFLRKKTSSNKASLRKTTTI---DSGRIQKKY 185


>gi|313848269|emb|CBY17270.1| 50S ribosomal protein L35 [Chlamydophila psittaci RD1]
          Length = 64

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N S   RF +T +G+++    GKRH + K+S++  RN     ++         +
Sbjct: 1  MPKMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKQ 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|313888390|ref|ZP_07822058.1| ribosomal protein L35 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845587|gb|EFR32980.1| ribosomal protein L35 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 63

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          M KMKT+ +S KRF  T +GK++   A K H   K++ K +R  R +  ++  D +++
Sbjct: 1  MAKMKTHRASAKRFKRTGSGKLKRFYAFKGHLTGKKTAKRLRKLRKSSTVSKGDQRRI 58


>gi|254515027|ref|ZP_05127088.1| ribosomal protein L35 [gamma proteobacterium NOR5-3]
 gi|219677270|gb|EED33635.1| ribosomal protein L35 [gamma proteobacterium NOR5-3]
          Length = 64

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++  +D   + R
Sbjct: 1  MPKAKVHSGAAKRFKKTAGG-YKRKSAHKSHILTKMTTKRKRQLRGTSMIHDSDKVLIDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|298204811|emb|CBI25644.3| unnamed protein product [Vitis vinifera]
          Length = 69

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI
Sbjct: 1  MKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVI 56


>gi|311693964|gb|ADP96837.1| ribosomal protein L35 [marine bacterium HP15]
          Length = 60

 Score = 51.6 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MKT S + KRF  TATG  + + +   H + K+S K  R  RGT ++A +D   + R
Sbjct: 1  MKTKSGATKRFKKTATG-FKHKQSFTSHILTKKSPKRKRQLRGTKLIAKSDVASIKR 56


>gi|228477493|ref|ZP_04062129.1| ribosomal protein L35 [Streptococcus salivarius SK126]
 gi|312862803|ref|ZP_07723043.1| ribosomal protein L35 [Streptococcus vestibularis F0396]
 gi|322516717|ref|ZP_08069626.1| 50S ribosomal protein L35 [Streptococcus vestibularis ATCC 49124]
 gi|228250928|gb|EEK10116.1| ribosomal protein L35 [Streptococcus salivarius SK126]
 gi|311101663|gb|EFQ59866.1| ribosomal protein L35 [Streptococcus vestibularis F0396]
 gi|322124750|gb|EFX96188.1| 50S ribosomal protein L35 [Streptococcus vestibularis ATCC 49124]
          Length = 66

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVHSGDFKRIK 59


>gi|327398464|ref|YP_004339333.1| 50S ribosomal protein L35 [Hippea maritima DSM 10411]
 gi|327181093|gb|AEA33274.1| 50S ribosomal protein L35 [Hippea maritima DSM 10411]
          Length = 65

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 33/64 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT  ++ KRFS TA G  +   AGK H +  ++ K  RN +    + S   K  ++  
Sbjct: 2  KLKTRRAAAKRFSKTANGHFKHARAGKSHLLFDKTRKRKRNLKRPNCIKSGQVKHNLKEL 61

Query: 63 LPNG 66
          +P G
Sbjct: 62 MPWG 65


>gi|160915883|ref|ZP_02078091.1| hypothetical protein EUBDOL_01906 [Eubacterium dolichum DSM 3991]
 gi|158432359|gb|EDP10648.1| hypothetical protein EUBDOL_01906 [Eubacterium dolichum DSM 3991]
          Length = 64

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++    KR   T +GK++   A   H    ++ K  R+ R    + S D K++ +
Sbjct: 1  MPKMKSHRGLAKRVKKTGSGKLKRSHAYTSHRFHGKTQKQKRHLRKASTVHSTDMKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|55821144|ref|YP_139586.1| 50S ribosomal protein L35 [Streptococcus thermophilus LMG 18311]
 gi|81676710|sp|Q5M471|RL35_STRT2 RecName: Full=50S ribosomal protein L35
 gi|55737129|gb|AAV60771.1| 50S ribosomal protein L35 [Streptococcus thermophilus LMG 18311]
          Length = 66

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVHSGDFKRIK 59


>gi|309389089|gb|ADO76969.1| LSU ribosomal protein L35P [Halanaerobium praevalens DSM 2228]
          Length = 64

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+    KR   T +GK++       H + K+S    RN R   +L+    KK  +
Sbjct: 1  MPKQKTHKGIAKRVKTTGSGKLKHHKGFHSHILTKKSGNRKRNLRQAKLLSKPYQKKYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|330719254|ref|ZP_08313854.1| 50S ribosomal protein L35 [Leuconostoc fallax KCTC 3537]
          Length = 65

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K   +
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVKTYAK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|227530473|ref|ZP_03960522.1| ribosomal protein L35 [Lactobacillus vaginalis ATCC 49540]
 gi|312868770|ref|ZP_07728962.1| ribosomal protein L35 [Lactobacillus oris PB013-T2-3]
 gi|227349578|gb|EEJ39869.1| ribosomal protein L35 [Lactobacillus vaginalis ATCC 49540]
 gi|311095756|gb|EFQ54008.1| ribosomal protein L35 [Lactobacillus oris PB013-T2-3]
          Length = 65

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA G  ++  +   H    ++ K  R  RG  ++  ++ K+  +
Sbjct: 1  MPKMKTNRAAAKRFKRTANGGFKSGNSFTSHRFHGKTKKQRRQLRGLSMMDKSNVKRYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|307721930|ref|YP_003893070.1| 50S ribosomal protein L35P [Sulfurimonas autotrophica DSM 16294]
 gi|306980023|gb|ADN10058.1| LSU ribosomal protein L35P [Sulfurimonas autotrophica DSM 16294]
          Length = 64

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 30/59 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF +   G+V+   A + H + K+  +  R      V+A +D K + 
Sbjct: 1  MPKMKSVKGAVKRFKVKKNGQVKRGTAFRSHILTKQDAQTRREQNTPKVVAKSDEKNIK 59


>gi|152991637|ref|YP_001357358.1| 50S ribosomal protein L35 [Sulfurovum sp. NBC37-1]
 gi|166233044|sp|A6Q692|RL35_SULNB RecName: Full=50S ribosomal protein L35
 gi|151423498|dbj|BAF71001.1| 50S ribosomal protein L35 [Sulfurovum sp. NBC37-1]
          Length = 63

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF +  +GK++   A + H + K   K  R  R +  + + DAK + 
Sbjct: 1  MPKMKSVKGAVKRFKVKKSGKIKRGTAYRSHILTKVDGKHHRQMRSSKHVDTVDAKNIK 59


>gi|169349800|ref|ZP_02866738.1| hypothetical protein CLOSPI_00538 [Clostridium spiroforme DSM
          1552]
 gi|169293368|gb|EDS75501.1| hypothetical protein CLOSPI_00538 [Clostridium spiroforme DSM
          1552]
          Length = 64

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S  KKR   T +GK++   A   H    +++K  ++     ++ ++D K++  
Sbjct: 1  MPKMKSHSGLKKRLKRTGSGKLKRSHAYVSHLSHNKTHKQKKHLAKATLVHASDYKRIKS 60

Query: 61 NY 62
            
Sbjct: 61 RL 62


>gi|163815465|ref|ZP_02206838.1| hypothetical protein COPEUT_01630 [Coprococcus eutactus ATCC
          27759]
 gi|158449102|gb|EDP26097.1| hypothetical protein COPEUT_01630 [Coprococcus eutactus ATCC
          27759]
 gi|295093748|emb|CBK82839.1| LSU ribosomal protein L35P [Coprococcus sp. ART55/1]
          Length = 65

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  TA G ++   A K H + K++ K  RN R    +  A  +KV++
Sbjct: 1  MAKLKTKRAAAKRFKKTANGGLKRSKAYKSHILTKKTTKRKRNLRKAT-MTDATNEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|163782695|ref|ZP_02177691.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881816|gb|EDP75324.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 66

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKTN S+KKRF +TATGK++    G  H   K+  K  R  R    +     K V 
Sbjct: 5  KMKTNRSAKKRFKVTATGKIKRWKGGGSHYNTKKDPKRKRRLRKATYVKENMEKHVR 61


>gi|212697336|ref|ZP_03305464.1| hypothetical protein ANHYDRO_01905 [Anaerococcus hydrogenalis DSM
          7454]
 gi|325847682|ref|ZP_08170005.1| ribosomal protein L35 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675785|gb|EEB35392.1| hypothetical protein ANHYDRO_01905 [Anaerococcus hydrogenalis DSM
          7454]
 gi|325480894|gb|EGC83946.1| ribosomal protein L35 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 66

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT  ++ KRF +T +GK++   A K H   K++    R  R + + A  DAK + R  
Sbjct: 5  KIKTKRAAAKRFKVTGSGKIKRHKAYKGHLTAKKTPARKRRLRKSTIAAKGDAKNIKRLL 64


>gi|22537530|ref|NP_688381.1| 50S ribosomal protein L35 [Streptococcus agalactiae 2603V/R]
 gi|25011495|ref|NP_735890.1| 50S ribosomal protein L35 [Streptococcus agalactiae NEM316]
 gi|76787843|ref|YP_330024.1| 50S ribosomal protein L35 [Streptococcus agalactiae A909]
 gi|76797696|ref|ZP_00779964.1| ribosomal protein L35 [Streptococcus agalactiae 18RS21]
 gi|77407200|ref|ZP_00784174.1| ribosomal protein L35 [Streptococcus agalactiae H36B]
 gi|77414727|ref|ZP_00790856.1| ribosomal protein L35 [Streptococcus agalactiae 515]
 gi|54036309|sp|Q8DYU0|RL35_STRA5 RecName: Full=50S ribosomal protein L35
 gi|54036310|sp|Q8E4E8|RL35_STRA3 RecName: Full=50S ribosomal protein L35
 gi|148887114|sp|Q3K0C9|RL35_STRA1 RecName: Full=50S ribosomal protein L35
 gi|22534411|gb|AAN00254.1|AE014255_12 ribosomal protein L35 [Streptococcus agalactiae 2603V/R]
 gi|24413033|emb|CAD47112.1| 50S ribosomal protein L35 [Streptococcus agalactiae NEM316]
 gi|76562900|gb|ABA45484.1| ribosomal protein L35 [Streptococcus agalactiae A909]
 gi|76586920|gb|EAO63410.1| ribosomal protein L35 [Streptococcus agalactiae 18RS21]
 gi|77159213|gb|EAO70395.1| ribosomal protein L35 [Streptococcus agalactiae 515]
 gi|77174191|gb|EAO77086.1| ribosomal protein L35 [Streptococcus agalactiae H36B]
 gi|319745337|gb|EFV97652.1| 50S ribosomal protein L35 [Streptococcus agalactiae ATCC 13813]
          Length = 66

 Score = 51.6 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   +++S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKATMVSSGDFKRIK 59


>gi|156086216|ref|XP_001610517.1| ribosomal protein L35 [Babesia bovis T2Bo]
 gi|154797770|gb|EDO06949.1| ribosomal protein L35, putative [Babesia bovis]
          Length = 140

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN +  KRF ITATGK+  + AGK H   K+++   R  + ++ L +    ++IR  
Sbjct: 77  KPKTNKAVSKRFKITATGKLIYKRAGKSHLQRKKTHGAKRRLKRSVQLKNP---RLIRKI 133

Query: 63  L 63
           L
Sbjct: 134 L 134


>gi|260907210|ref|ZP_05915532.1| ribosomal protein L35 [Brevibacterium linens BL2]
          Length = 68

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTNSS+KKR  +T TGK+  +    +H    +S+   R      VL   D  K  +
Sbjct: 1  MPKQKTNSSAKKRMRVTGTGKIMREGVNNQHKFEGKSSARKRRVAEDQVLTGGDRAKARK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|88706034|ref|ZP_01103742.1| Ribosomal protein L35 [Congregibacter litoralis KT71]
 gi|88699748|gb|EAQ96859.1| Ribosomal protein L35 [Congregibacter litoralis KT71]
          Length = 64

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++   D   + R
Sbjct: 1  MPKAKIHSGAAKRFKKTAGG-YKRKSAHKSHILTKMTTKRKRQLRGTSMIHDNDKVLIDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|298204823|emb|CBI25656.3| unnamed protein product [Vitis vinifera]
          Length = 69

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MKT+ +S KRF +T  GK+  + AGK+H + K++ K          ++ +D   VI
Sbjct: 1  MKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVI 56


>gi|227892827|ref|ZP_04010632.1| ribosomal protein L35 [Lactobacillus ultunensis DSM 16047]
 gi|227865329|gb|EEJ72750.1| ribosomal protein L35 [Lactobacillus ultunensis DSM 16047]
          Length = 66

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDMKRIKQ 60

Query: 61 NYL 63
             
Sbjct: 61 MLA 63


>gi|90961472|ref|YP_535388.1| 50S ribosomal protein L35 [Lactobacillus salivarius UCC118]
 gi|227890562|ref|ZP_04008367.1| 50S ribosomal protein L35 [Lactobacillus salivarius ATCC 11741]
 gi|301300336|ref|ZP_07206541.1| ribosomal protein L35 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|148887079|sp|Q1WUN0|RL35_LACS1 RecName: Full=50S ribosomal protein L35
 gi|90820666|gb|ABD99305.1| LSU ribosomal protein L35P [Lactobacillus salivarius UCC118]
 gi|227867500|gb|EEJ74921.1| 50S ribosomal protein L35 [Lactobacillus salivarius ATCC 11741]
 gi|300852072|gb|EFK79751.1| ribosomal protein L35 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 66

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  T  G ++   A   H    ++ K  R  R   +++++D K++ +
Sbjct: 1  MPKQKTHRASAKRFKRTGNGGLKRSNAYTSHRFHGKTKKQRRQLRKASMVSASDMKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|330443794|ref|YP_004376780.1| 50S ribosomal protein L35 [Chlamydophila pecorum E58]
 gi|328806904|gb|AEB41077.1| ribosomal protein L35 [Chlamydophila pecorum E58]
          Length = 64

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N S   RF +T +G ++    GKRH + K+S++  RN     ++         R
Sbjct: 1  MPKMKSNKSVAARFKVTGSGLLKRNRPGKRHKLSKKSSQAKRNLSKHPIVDRGQVGMYKR 60

Query: 61 NYL 63
            L
Sbjct: 61 MML 63


>gi|303273116|ref|XP_003055919.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462003|gb|EEH59295.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 131

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KT  S+ KR+ +TA+GKV  +  GK+H    ++ +      G   +  A    +++  
Sbjct: 64  KAKTRKSAAKRYKVTASGKVLHRRPGKQHLNGHKTTERKTRLSGERQVGRAQIP-LVKGC 122

Query: 63  LPN 65
           LP 
Sbjct: 123 LPY 125


>gi|54036288|sp|Q7UP72|RL35_RHOBA RecName: Full=50S ribosomal protein L35
          Length = 68

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          K+KT+  +KKRF ++A GK   + +G  H     S K  RN RGT  +A      +
Sbjct: 4  KIKTHKGTKKRFRLSAKGKAMHRQSGTSHLAKGLSKKRRRNLRGTTAVAECMEPTI 59


>gi|119476520|ref|ZP_01616871.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2143]
 gi|119450384|gb|EAW31619.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2143]
          Length = 64

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K +S + KRF  T  G  + ++A K H + K + K  R  RGT  + ++D   + R
Sbjct: 1  MPKAKVHSGAAKRFKKTGAG-YKRKSAHKSHILTKMTTKRKRQLRGTSEVHASDKVLIDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|295425301|ref|ZP_06818004.1| 50S ribosomal protein L35 [Lactobacillus amylolyticus DSM 11664]
 gi|295065077|gb|EFG55982.1| 50S ribosomal protein L35 [Lactobacillus amylolyticus DSM 11664]
          Length = 66

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDMKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|218288921|ref|ZP_03493172.1| ribosomal protein L35 [Alicyclobacillus acidocaldarius LAA1]
 gi|258512135|ref|YP_003185569.1| 50S ribosomal protein L35 [Alicyclobacillus acidocaldarius subsp.
          acidocaldarius DSM 446]
 gi|218241010|gb|EED08187.1| ribosomal protein L35 [Alicyclobacillus acidocaldarius LAA1]
 gi|257478861|gb|ACV59180.1| ribosomal protein L35 [Alicyclobacillus acidocaldarius subsp.
          acidocaldarius DSM 446]
          Length = 67

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 29/57 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKT+S  KKR   T TG ++   A   H    +S    R  RG  +++ +D K++ 
Sbjct: 5  KMKTHSGLKKRVKRTGTGLLKRTKAFAYHKAEHKSPARKRRLRGMTLVSGSDLKRIK 61


>gi|156097166|ref|XP_001614616.1| ribosomal protein L35 [Plasmodium vivax SaI-1]
 gi|148803490|gb|EDL44889.1| ribosomal protein L35, putative [Plasmodium vivax]
          Length = 162

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN S  KRF IT  GKV  + AG+ H + K+++    + R T  +AS    ++ + Y
Sbjct: 100 KPKTNKSIAKRFKITKNGKVIRKKAGRNHMLRKKTSSNKASLRKTTTIAS---NRIAKKY 156


>gi|325177051|emb|CCA21006.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 118

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+ T +S KKRF +   G V+   + KRH   K+S + +R     +++     KK+ +N 
Sbjct: 56  KLSTKTSVKKRFRVNCNGVVKRAQSNKRHIATKKSRERLRRLSKNVLVT---TKKIRKNI 112

Query: 63  L 63
           +
Sbjct: 113 I 113


>gi|88859308|ref|ZP_01133948.1| 50S ribosomal subunit protein A [Pseudoalteromonas tunicata D2]
 gi|88818325|gb|EAR28140.1| 50S ribosomal subunit protein A [Pseudoalteromonas tunicata D2]
          Length = 66

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K++  + KRF  TA+G  + + +  RH + K+S+K     R   ++   D   V R  
Sbjct: 4  KLKSHRGAAKRFKKTASGGFKRKQSHLRHILTKKSSKRKLALRSKTMVHKNDIGLVSRML 63


>gi|259503612|ref|ZP_05746514.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168436|gb|EEW52931.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 65

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA G  ++  +   H    ++ K  R  RG  ++  ++ K+  +
Sbjct: 1  MPKMKTNRAAAKRFKRTANGGFKSANSFTSHRFHGKTKKQRRQLRGLSMMDKSNVKRYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|238855711|ref|ZP_04646007.1| ribosomal protein L35 [Lactobacillus jensenii 269-3]
 gi|256850833|ref|ZP_05556222.1| ribosomal protein L35 [Lactobacillus jensenii 27-2-CHN]
 gi|260661044|ref|ZP_05861958.1| ribosomal protein L35 [Lactobacillus jensenii 115-3-CHN]
 gi|260665497|ref|ZP_05866344.1| ribosomal protein L35 [Lactobacillus jensenii SJ-7A-US]
 gi|282934498|ref|ZP_06339753.1| ribosomal protein L35 [Lactobacillus jensenii 208-1]
 gi|282934766|ref|ZP_06340006.1| ribosomal protein L35 [Lactobacillus jensenii 208-1]
 gi|297205706|ref|ZP_06923101.1| 50S ribosomal protein L35 [Lactobacillus jensenii JV-V16]
 gi|313471819|ref|ZP_07812311.1| ribosomal protein L35 [Lactobacillus jensenii 1153]
 gi|238831657|gb|EEQ23998.1| ribosomal protein L35 [Lactobacillus jensenii 269-3]
 gi|239530138|gb|EEQ69139.1| ribosomal protein L35 [Lactobacillus jensenii 1153]
 gi|256615895|gb|EEU21083.1| ribosomal protein L35 [Lactobacillus jensenii 27-2-CHN]
 gi|260547981|gb|EEX23957.1| ribosomal protein L35 [Lactobacillus jensenii 115-3-CHN]
 gi|260560765|gb|EEX26742.1| ribosomal protein L35 [Lactobacillus jensenii SJ-7A-US]
 gi|281301177|gb|EFA93481.1| ribosomal protein L35 [Lactobacillus jensenii 208-1]
 gi|281301445|gb|EFA93734.1| ribosomal protein L35 [Lactobacillus jensenii 208-1]
 gi|297148832|gb|EFH29130.1| 50S ribosomal protein L35 [Lactobacillus jensenii JV-V16]
          Length = 66

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  T  G ++   A   H    ++ K  R+ R   +++ +D K++ +
Sbjct: 1  MPKQKTHRASAKRFKRTGNGGLKRHHAFTGHRFHGKTKKQRRHLRKAAMVSRSDLKRIKQ 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|160893269|ref|ZP_02074057.1| hypothetical protein CLOL250_00815 [Clostridium sp. L2-50]
 gi|156865352|gb|EDO58783.1| hypothetical protein CLOL250_00815 [Clostridium sp. L2-50]
          Length = 65

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KRF  TA G ++   A K H + K++ K  RN R    +  +  +KV++
Sbjct: 1  MAKLKTKRAAAKRFKKTANGGLKRSKAYKSHILTKKTTKRKRNLRKLT-MTDSTNEKVMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|28411206|emb|CAD24034.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 76

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V
Sbjct: 7  KMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 62


>gi|11467701|ref|NP_050753.1| ribosomal protein L35 [Guillardia theta]
 gi|6093990|sp|O78496|RK35_GUITH RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|3603026|gb|AAC35687.1| ribosomal protein L35 [Guillardia theta]
          Length = 66

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S++KRF I+A GK   + A K H + K+++K  RN +  M++   +    ++
Sbjct: 1  MPKLKTRKSARKRFYISAKGKFVRKRAFKSHILEKKTSKRKRNLKRKMIVFKGE-NLALK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TMLPY 64


>gi|69248641|ref|ZP_00604786.1| Ribosomal protein L35 [Enterococcus faecium DO]
 gi|227550908|ref|ZP_03980957.1| ribosomal protein L35 [Enterococcus faecium TX1330]
 gi|257878890|ref|ZP_05658543.1| ribosomal protein L35 [Enterococcus faecium 1,230,933]
 gi|257881526|ref|ZP_05661179.1| ribosomal protein L35 [Enterococcus faecium 1,231,502]
 gi|257885798|ref|ZP_05665451.1| ribosomal protein L35 [Enterococcus faecium 1,231,501]
 gi|257887843|ref|ZP_05667496.1| ribosomal protein L35 [Enterococcus faecium 1,141,733]
 gi|257890748|ref|ZP_05670401.1| ribosomal protein L35 [Enterococcus faecium 1,231,410]
 gi|257893359|ref|ZP_05673012.1| ribosomal protein L35 [Enterococcus faecium 1,231,408]
 gi|257896539|ref|ZP_05676192.1| ribosomal protein L35 [Enterococcus faecium Com12]
 gi|257899520|ref|ZP_05679173.1| ribosomal protein L35 [Enterococcus faecium Com15]
 gi|258615038|ref|ZP_05712808.1| 50S ribosomal protein L35 [Enterococcus faecium DO]
 gi|260558449|ref|ZP_05830645.1| ribosomal protein L35 [Enterococcus faecium C68]
 gi|261207171|ref|ZP_05921860.1| ribosomal protein L35 [Enterococcus faecium TC 6]
 gi|289565292|ref|ZP_06445743.1| 50S ribosomal protein L35 [Enterococcus faecium D344SRF]
 gi|293379319|ref|ZP_06625465.1| ribosomal protein L35 [Enterococcus faecium PC4.1]
 gi|293556930|ref|ZP_06675491.1| ribosomal protein L35 [Enterococcus faecium E1039]
 gi|293560312|ref|ZP_06676809.1| ribosomal protein L35 [Enterococcus faecium E1162]
 gi|293567755|ref|ZP_06679096.1| ribosomal protein L35 [Enterococcus faecium E1071]
 gi|293572983|ref|ZP_06683925.1| ribosomal protein L35 [Enterococcus faecium E980]
 gi|294615067|ref|ZP_06694953.1| ribosomal protein L35 [Enterococcus faecium E1636]
 gi|294617095|ref|ZP_06696762.1| ribosomal protein L35 [Enterococcus faecium E1679]
 gi|294620925|ref|ZP_06700126.1| ribosomal protein L35 [Enterococcus faecium U0317]
 gi|314938984|ref|ZP_07846249.1| ribosomal protein L35 [Enterococcus faecium TX0133a04]
 gi|314943465|ref|ZP_07850232.1| ribosomal protein L35 [Enterococcus faecium TX0133C]
 gi|314948242|ref|ZP_07851636.1| ribosomal protein L35 [Enterococcus faecium TX0082]
 gi|314951602|ref|ZP_07854648.1| ribosomal protein L35 [Enterococcus faecium TX0133A]
 gi|314991535|ref|ZP_07857011.1| ribosomal protein L35 [Enterococcus faecium TX0133B]
 gi|314994868|ref|ZP_07859995.1| ribosomal protein L35 [Enterococcus faecium TX0133a01]
 gi|68194366|gb|EAN08875.1| Ribosomal protein L35 [Enterococcus faecium DO]
 gi|227180006|gb|EEI60978.1| ribosomal protein L35 [Enterococcus faecium TX1330]
 gi|257813118|gb|EEV41876.1| ribosomal protein L35 [Enterococcus faecium 1,230,933]
 gi|257817184|gb|EEV44512.1| ribosomal protein L35 [Enterococcus faecium 1,231,502]
 gi|257821654|gb|EEV48784.1| ribosomal protein L35 [Enterococcus faecium 1,231,501]
 gi|257823897|gb|EEV50829.1| ribosomal protein L35 [Enterococcus faecium 1,141,733]
 gi|257827108|gb|EEV53734.1| ribosomal protein L35 [Enterococcus faecium 1,231,410]
 gi|257829738|gb|EEV56345.1| ribosomal protein L35 [Enterococcus faecium 1,231,408]
 gi|257833104|gb|EEV59525.1| ribosomal protein L35 [Enterococcus faecium Com12]
 gi|257837432|gb|EEV62506.1| ribosomal protein L35 [Enterococcus faecium Com15]
 gi|260075623|gb|EEW63929.1| ribosomal protein L35 [Enterococcus faecium C68]
 gi|260078799|gb|EEW66501.1| ribosomal protein L35 [Enterococcus faecium TC 6]
 gi|289162948|gb|EFD10797.1| 50S ribosomal protein L35 [Enterococcus faecium D344SRF]
 gi|291589340|gb|EFF21147.1| ribosomal protein L35 [Enterococcus faecium E1071]
 gi|291592009|gb|EFF23632.1| ribosomal protein L35 [Enterococcus faecium E1636]
 gi|291596653|gb|EFF27879.1| ribosomal protein L35 [Enterococcus faecium E1679]
 gi|291599536|gb|EFF30552.1| ribosomal protein L35 [Enterococcus faecium U0317]
 gi|291601014|gb|EFF31305.1| ribosomal protein L35 [Enterococcus faecium E1039]
 gi|291605762|gb|EFF35199.1| ribosomal protein L35 [Enterococcus faecium E1162]
 gi|291606885|gb|EFF36265.1| ribosomal protein L35 [Enterococcus faecium E980]
 gi|292642115|gb|EFF60279.1| ribosomal protein L35 [Enterococcus faecium PC4.1]
 gi|313590850|gb|EFR69695.1| ribosomal protein L35 [Enterococcus faecium TX0133a01]
 gi|313593819|gb|EFR72664.1| ribosomal protein L35 [Enterococcus faecium TX0133B]
 gi|313596296|gb|EFR75141.1| ribosomal protein L35 [Enterococcus faecium TX0133A]
 gi|313597837|gb|EFR76682.1| ribosomal protein L35 [Enterococcus faecium TX0133C]
 gi|313641693|gb|EFS06273.1| ribosomal protein L35 [Enterococcus faecium TX0133a04]
 gi|313645375|gb|EFS09955.1| ribosomal protein L35 [Enterococcus faecium TX0082]
          Length = 66

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T  G ++   A   H    ++ K  R  R   +++S D K++ +
Sbjct: 1  MPKQKTHRGSAKRFKRTGKGGLKRFRAFTSHRFHGKTKKQRRQLRKASMVSSGDFKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|299821797|ref|ZP_07053685.1| 50S ribosomal protein L35 [Listeria grayi DSM 20601]
 gi|299817462|gb|EFI84698.1| 50S ribosomal protein L35 [Listeria grayi DSM 20601]
          Length = 66

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT+  + KR   T TGK++ +     H    +S K  R  R   ++++ D K++ 
Sbjct: 1  MPKMKTHRGTAKRLKRTGTGKLKRRHGFTSHMFANKSQKQKRKLRKAAMVSAGDFKRIR 59


>gi|189485295|ref|YP_001956236.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
 gi|170287254|dbj|BAG13775.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
          Length = 63

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MK +S +KKRF +T  GKV+ +  G+RH +   S    R AR   ++  +D K + +  
Sbjct: 1  MKQHSGAKKRFKVTGKGKVKYKKPGQRHLLTGDSGNQNRKARKPAIVTKSDMKTMKKIM 59


>gi|270284018|ref|ZP_05965423.2| ribosomal protein L35 [Bifidobacterium gallicum DSM 20093]
 gi|270277945|gb|EFA23799.1| ribosomal protein L35 [Bifidobacterium gallicum DSM 20093]
          Length = 80

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTNS+++KR  +T +GKV    +  RH +  +S +  R  +    L++  AKK+ 
Sbjct: 17 MPKMKTNSAARKRVRVTGSGKVVHNGSAMRHNLEHKSARKRRALKANKTLSTPQAKKMK 75


>gi|218283435|ref|ZP_03489443.1| hypothetical protein EUBIFOR_02032 [Eubacterium biforme DSM 3989]
 gi|218215864|gb|EEC89402.1| hypothetical protein EUBIFOR_02032 [Eubacterium biforme DSM 3989]
          Length = 64

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++    KR   T +GK++   A   H    ++ K  R+      + + D K++  
Sbjct: 1  MPKMKSHRGLAKRVKKTGSGKLKRSHAYTSHRFHGKTKKQRRHLAKPGTVHATDYKRIKE 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|11467304|ref|NP_043161.1| ribosomal protein L35 [Cyanophora paradoxa]
 gi|132915|sp|P14810|RK35_CYAPA RecName: Full=50S ribosomal protein L35, cyanelle
 gi|11292|emb|CAA34907.1| ribosomal protein L35 [Cyanophora paradoxa]
 gi|1016105|gb|AAA81192.1| ribosomal protein L35 [Cyanophora paradoxa]
          Length = 65

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  ++ KR+      K+  + A + H + K+S    R     ++ +  D KK+  
Sbjct: 1  MYKLKTRKAAAKRYKAVGNKKISRRKAFRSHLLQKKSTNRKRQLSQVVIASPGDTKKIY- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 LMLPY 64


>gi|296876707|ref|ZP_06900755.1| 50S ribosomal protein L35 [Streptococcus parasanguinis ATCC
          15912]
 gi|312867685|ref|ZP_07727891.1| ribosomal protein L35 [Streptococcus parasanguinis F0405]
 gi|322389275|ref|ZP_08062835.1| 50S ribosomal protein L35 [Streptococcus parasanguinis ATCC 903]
 gi|322392246|ref|ZP_08065707.1| 50S ribosomal protein L35 [Streptococcus peroris ATCC 700780]
 gi|296432209|gb|EFH18008.1| 50S ribosomal protein L35 [Streptococcus parasanguinis ATCC
          15912]
 gi|311096748|gb|EFQ54986.1| ribosomal protein L35 [Streptococcus parasanguinis F0405]
 gi|321144019|gb|EFX39437.1| 50S ribosomal protein L35 [Streptococcus parasanguinis ATCC 903]
 gi|321144781|gb|EFX40181.1| 50S ribosomal protein L35 [Streptococcus peroris ATCC 700780]
          Length = 66

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ + D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKASMVHAGDFKRIK 59


>gi|288818525|ref|YP_003432873.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
 gi|288787925|dbj|BAI69672.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
 gi|308752115|gb|ADO45598.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
          Length = 66

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMK+N S+KKRF ITA GK++   AG  H   K++    R  R   ++ S    K+ 
Sbjct: 5  KMKSNRSAKKRFKITAKGKIKRWHAGGSHYNTKKAKDRKRRLRKPTLVNSGWEDKIR 61


>gi|170016926|ref|YP_001727845.1| ribosomal protein L35 [Leuconostoc citreum KM20]
 gi|296110552|ref|YP_003620933.1| ribosomal protein L35 [Leuconostoc kimchii IMSNU 11154]
 gi|300173541|ref|YP_003772707.1| 50S ribosomal protein L35 [Leuconostoc gasicomitatum LMG 18811]
 gi|226725029|sp|B1MXZ9|RL35_LEUCK RecName: Full=50S ribosomal protein L35
 gi|169803783|gb|ACA82401.1| Ribosomal protein L35 [Leuconostoc citreum KM20]
 gi|295832083|gb|ADG39964.1| ribosomal protein L35 [Leuconostoc kimchii IMSNU 11154]
 gi|299887920|emb|CBL91888.1| 50S ribosomal protein L35 [Leuconostoc gasicomitatum LMG 18811]
          Length = 65

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K   +
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVKTYAK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|167757065|ref|ZP_02429192.1| hypothetical protein CLORAM_02614 [Clostridium ramosum DSM 1402]
 gi|237735864|ref|ZP_04566345.1| 50S ribosomal protein L35 [Mollicutes bacterium D7]
 gi|167703240|gb|EDS17819.1| hypothetical protein CLORAM_02614 [Clostridium ramosum DSM 1402]
 gi|229381609|gb|EEO31700.1| 50S ribosomal protein L35 [Coprobacillus sp. D7]
          Length = 64

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S  KKR   T +GK++   A   H    +++K  ++     +++++D K++  
Sbjct: 1  MPKMKSHSGLKKRLKRTGSGKLKRSHAYVSHLSHNKTHKQKKHLAKATLVSASDYKRIKS 60

Query: 61 NYL 63
             
Sbjct: 61 RLA 63


>gi|295099719|emb|CBK88808.1| LSU ribosomal protein L35P [Eubacterium cylindroides T2-87]
          Length = 64

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK++    KR   T +GK++   A   H    ++ K  R+      + + D K++ 
Sbjct: 1  MPKMKSHRGLAKRVKKTGSGKLKRSHAYTSHRFHGKTKKQRRHLAKPATVHATDYKRIK 59


>gi|157150048|ref|YP_001450322.1| 50S ribosomal protein L35 [Streptococcus gordonii str. Challis
          substr. CH1]
 gi|262282399|ref|ZP_06060167.1| ribosomal protein L35 [Streptococcus sp. 2_1_36FAA]
 gi|270292936|ref|ZP_06199147.1| conserved domain protein [Streptococcus sp. M143]
 gi|293365205|ref|ZP_06611922.1| 50S ribosomal protein L35 [Streptococcus oralis ATCC 35037]
 gi|306825433|ref|ZP_07458773.1| 50S ribosomal protein L35 [Streptococcus sp. oral taxon 071 str.
          73H25AP]
 gi|306829312|ref|ZP_07462502.1| 50S ribosomal protein L35 [Streptococcus mitis ATCC 6249]
 gi|307703743|ref|ZP_07640684.1| ribosomal protein L35 [Streptococcus oralis ATCC 35037]
 gi|309800230|ref|ZP_07694409.1| ribosomal protein L35 [Streptococcus infantis SK1302]
 gi|315612968|ref|ZP_07887879.1| 50S ribosomal protein L35 [Streptococcus sanguinis ATCC 49296]
 gi|319946724|ref|ZP_08020958.1| 50S ribosomal protein L35 [Streptococcus australis ATCC 700641]
 gi|322374506|ref|ZP_08049020.1| ribosomal protein L35 [Streptococcus sp. C300]
 gi|322388182|ref|ZP_08061786.1| 50S ribosomal protein L35 [Streptococcus infantis ATCC 700779]
 gi|331266579|ref|YP_004326209.1| 50S ribosomal protein L35 [Streptococcus oralis Uo5]
 gi|189042793|sp|A8AX12|RL35_STRGC RecName: Full=50S ribosomal protein L35
 gi|157074842|gb|ABV09525.1| ribosomal protein L35 [Streptococcus gordonii str. Challis
          substr. CH1]
 gi|262261690|gb|EEY80388.1| ribosomal protein L35 [Streptococcus sp. 2_1_36FAA]
 gi|270278915|gb|EFA24761.1| conserved domain protein [Streptococcus sp. M143]
 gi|291316655|gb|EFE57091.1| 50S ribosomal protein L35 [Streptococcus oralis ATCC 35037]
 gi|304428398|gb|EFM31488.1| 50S ribosomal protein L35 [Streptococcus mitis ATCC 6249]
 gi|304432371|gb|EFM35347.1| 50S ribosomal protein L35 [Streptococcus sp. oral taxon 071 str.
          73H25AP]
 gi|307622578|gb|EFO01574.1| ribosomal protein L35 [Streptococcus oralis ATCC 35037]
 gi|308116138|gb|EFO53635.1| ribosomal protein L35 [Streptococcus infantis SK1302]
 gi|315315078|gb|EFU63119.1| 50S ribosomal protein L35 [Streptococcus sanguinis ATCC 49296]
 gi|319746772|gb|EFV99031.1| 50S ribosomal protein L35 [Streptococcus australis ATCC 700641]
 gi|321140854|gb|EFX36355.1| 50S ribosomal protein L35 [Streptococcus infantis ATCC 700779]
 gi|321280006|gb|EFX57045.1| ribosomal protein L35 [Streptococcus sp. C300]
 gi|326683251|emb|CBZ00869.1| 50S ribosomal protein L35 [Streptococcus oralis Uo5]
          Length = 66

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKASMVHSGDFKRIK 59


>gi|15900837|ref|NP_345441.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TIGR4]
 gi|15902906|ref|NP_358456.1| 50S ribosomal protein L35 [Streptococcus pneumoniae R6]
 gi|111658039|ref|ZP_01408741.1| hypothetical protein SpneT_02000772 [Streptococcus pneumoniae
          TIGR4]
 gi|116516458|ref|YP_816330.1| 50S ribosomal protein L35 [Streptococcus pneumoniae D39]
 gi|148984702|ref|ZP_01817970.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP3-BS71]
 gi|148988400|ref|ZP_01819847.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP6-BS73]
 gi|148992905|ref|ZP_01822524.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP9-BS68]
 gi|148998605|ref|ZP_01826045.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP11-BS70]
 gi|149002510|ref|ZP_01827444.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS69]
 gi|149006364|ref|ZP_01830076.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP18-BS74]
 gi|149010394|ref|ZP_01831765.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP19-BS75]
 gi|149019551|ref|ZP_01834870.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP23-BS72]
 gi|168483030|ref|ZP_02707982.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1873-00]
 gi|168485912|ref|ZP_02710420.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1087-00]
 gi|168490221|ref|ZP_02714420.1| ribosomal protein L35 [Streptococcus pneumoniae SP195]
 gi|168491049|ref|ZP_02715192.1| ribosomal protein L35 [Streptococcus pneumoniae CDC0288-04]
 gi|168494389|ref|ZP_02718532.1| ribosomal protein L35 [Streptococcus pneumoniae CDC3059-06]
 gi|168575622|ref|ZP_02721558.1| ribosomal protein L35 [Streptococcus pneumoniae MLV-016]
 gi|169833003|ref|YP_001694405.1| 50S ribosomal protein L35 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683906|ref|YP_001835653.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CGSP14]
 gi|194396802|ref|YP_002037595.1| 50S ribosomal protein L35 [Streptococcus pneumoniae G54]
 gi|221231723|ref|YP_002510875.1| 50S ribosomal protein L35 [Streptococcus pneumoniae ATCC 700669]
 gi|225854464|ref|YP_002735976.1| 50S ribosomal protein L35 [Streptococcus pneumoniae JJA]
 gi|225856618|ref|YP_002738129.1| 50S ribosomal protein L35 [Streptococcus pneumoniae P1031]
 gi|225858753|ref|YP_002740263.1| 50S ribosomal protein L35 [Streptococcus pneumoniae 70585]
 gi|225861153|ref|YP_002742662.1| 50S ribosomal protein L35 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650890|ref|ZP_04525142.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CCRI 1974]
 gi|237821899|ref|ZP_04597744.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CCRI 1974M2]
 gi|289167803|ref|YP_003446072.1| 50S ribosomal protein L35 [Streptococcus mitis B6]
 gi|298229846|ref|ZP_06963527.1| 50S ribosomal protein L35 [Streptococcus pneumoniae str. Canada
          MDR_19F]
 gi|298254545|ref|ZP_06978131.1| 50S ribosomal protein L35 [Streptococcus pneumoniae str. Canada
          MDR_19A]
 gi|298503030|ref|YP_003724970.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TCH8431/19A]
 gi|303254428|ref|ZP_07340534.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS455]
 gi|303259872|ref|ZP_07345847.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP-BS293]
 gi|303262286|ref|ZP_07348230.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS292]
 gi|303264708|ref|ZP_07350626.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS397]
 gi|303267237|ref|ZP_07353102.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS457]
 gi|303269523|ref|ZP_07355288.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS458]
 gi|307067617|ref|YP_003876583.1| hypothetical protein SPAP_0992 [Streptococcus pneumoniae AP200]
 gi|307127489|ref|YP_003879520.1| 50S ribosomal protein L35 [Streptococcus pneumoniae 670-6B]
 gi|307704690|ref|ZP_07641589.1| ribosomal protein L35 [Streptococcus mitis SK597]
 gi|307706458|ref|ZP_07643267.1| ribosomal protein L35 [Streptococcus mitis SK321]
 gi|307708592|ref|ZP_07645056.1| ribosomal protein L35 [Streptococcus mitis NCTC 12261]
 gi|307709141|ref|ZP_07645600.1| ribosomal protein L35 [Streptococcus mitis SK564]
 gi|322376454|ref|ZP_08050947.1| ribosomal protein L35 [Streptococcus sp. M334]
 gi|54039208|sp|P66279|RL35_STRR6 RecName: Full=50S ribosomal protein L35
 gi|54041904|sp|P66278|RL35_STRPN RecName: Full=50S ribosomal protein L35
 gi|122278784|sp|Q04KW8|RL35_STRP2 RecName: Full=50S ribosomal protein L35
 gi|226725070|sp|B5E479|RL35_STRP4 RecName: Full=50S ribosomal protein L35
 gi|226725071|sp|B1IBC0|RL35_STRPI RecName: Full=50S ribosomal protein L35
 gi|226725072|sp|B2IPB4|RL35_STRPS RecName: Full=50S ribosomal protein L35
 gi|254799881|sp|C1CDV5|RL35_STRZJ RecName: Full=50S ribosomal protein L35
 gi|254799882|sp|C1CK41|RL35_STRZP RecName: Full=50S ribosomal protein L35
 gi|254799883|sp|C1CRU0|RL35_STRZT RecName: Full=50S ribosomal protein L35
 gi|254802471|sp|C1C6T7|RL35_STRP7 RecName: Full=50S ribosomal protein L35
 gi|254802472|sp|B8ZP57|RL35_STRPJ RecName: Full=50S ribosomal protein L35
 gi|14972434|gb|AAK75081.1| ribosomal protein L35 [Streptococcus pneumoniae TIGR4]
 gi|15458466|gb|AAK99666.1| 50S Ribosomal protein L35 [Streptococcus pneumoniae R6]
 gi|116077034|gb|ABJ54754.1| ribosomal protein L35 [Streptococcus pneumoniae D39]
 gi|147755603|gb|EDK62650.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP11-BS70]
 gi|147759447|gb|EDK66439.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS69]
 gi|147762141|gb|EDK69103.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP18-BS74]
 gi|147764875|gb|EDK71804.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP19-BS75]
 gi|147923093|gb|EDK74208.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP3-BS71]
 gi|147926081|gb|EDK77155.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP6-BS73]
 gi|147928357|gb|EDK79373.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP9-BS68]
 gi|147930926|gb|EDK81906.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP23-BS72]
 gi|168995505|gb|ACA36117.1| ribosomal protein L35 [Streptococcus pneumoniae Hungary19A-6]
 gi|172043549|gb|EDT51595.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1873-00]
 gi|182629240|gb|ACB90188.1| 50S ribosomal protein L35 [Streptococcus pneumoniae CGSP14]
 gi|183571041|gb|EDT91569.1| ribosomal protein L35 [Streptococcus pneumoniae CDC1087-00]
 gi|183571431|gb|EDT91959.1| ribosomal protein L35 [Streptococcus pneumoniae SP195]
 gi|183574542|gb|EDT95070.1| ribosomal protein L35 [Streptococcus pneumoniae CDC0288-04]
 gi|183575648|gb|EDT96176.1| ribosomal protein L35 [Streptococcus pneumoniae CDC3059-06]
 gi|183578500|gb|EDT99028.1| ribosomal protein L35 [Streptococcus pneumoniae MLV-016]
 gi|194356469|gb|ACF54917.1| ribosomal protein L35 [Streptococcus pneumoniae G54]
 gi|220674183|emb|CAR68711.1| 50S ribosomal protein L35 [Streptococcus pneumoniae ATCC 700669]
 gi|225721894|gb|ACO17748.1| ribosomal protein L35 [Streptococcus pneumoniae 70585]
 gi|225724223|gb|ACO20076.1| ribosomal protein L35 [Streptococcus pneumoniae JJA]
 gi|225724393|gb|ACO20245.1| ribosomal protein L35 [Streptococcus pneumoniae P1031]
 gi|225728339|gb|ACO24190.1| ribosomal protein L35 [Streptococcus pneumoniae Taiwan19F-14]
 gi|288907370|emb|CBJ22207.1| 50S ribosomal protein L35 [Streptococcus mitis B6]
 gi|298238625|gb|ADI69756.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TCH8431/19A]
 gi|301794098|emb|CBW36504.1| 50S ribosomal protein L35 [Streptococcus pneumoniae INV104]
 gi|301799936|emb|CBW32519.1| 50S ribosomal protein L35 [Streptococcus pneumoniae OXC141]
 gi|301801803|emb|CBW34514.1| 50S ribosomal protein L35 [Streptococcus pneumoniae INV200]
 gi|302598595|gb|EFL65635.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS455]
 gi|302636609|gb|EFL67100.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP14-BS292]
 gi|302639077|gb|EFL69537.1| 50S ribosomal protein L35 [Streptococcus pneumoniae SP-BS293]
 gi|302640959|gb|EFL71341.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS458]
 gi|302643246|gb|EFL73528.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS457]
 gi|302645795|gb|EFL76024.1| 50S ribosomal protein L35 [Streptococcus pneumoniae BS397]
 gi|306409154|gb|ADM84581.1| hypothetical protein SPAP_0992 [Streptococcus pneumoniae AP200]
 gi|306484551|gb|ADM91420.1| ribosomal protein L35 [Streptococcus pneumoniae 670-6B]
 gi|307615341|gb|EFN94550.1| ribosomal protein L35 [Streptococcus mitis NCTC 12261]
 gi|307618168|gb|EFN97326.1| ribosomal protein L35 [Streptococcus mitis SK321]
 gi|307620087|gb|EFN99204.1| ribosomal protein L35 [Streptococcus mitis SK564]
 gi|307621737|gb|EFO00775.1| ribosomal protein L35 [Streptococcus mitis SK597]
 gi|321282261|gb|EFX59268.1| ribosomal protein L35 [Streptococcus sp. M334]
 gi|327389238|gb|EGE87583.1| ribosomal protein L35 [Streptococcus pneumoniae GA04375]
 gi|332073293|gb|EGI83772.1| ribosomal protein L35 [Streptococcus pneumoniae GA17570]
 gi|332075576|gb|EGI86044.1| ribosomal protein L35 [Streptococcus pneumoniae GA17545]
 gi|332076234|gb|EGI86700.1| ribosomal protein L35 [Streptococcus pneumoniae GA41301]
 gi|332201426|gb|EGJ15496.1| ribosomal protein L35 [Streptococcus pneumoniae GA47368]
 gi|332202815|gb|EGJ16884.1| ribosomal protein L35 [Streptococcus pneumoniae GA41317]
 gi|332204963|gb|EGJ19028.1| ribosomal protein L35 [Streptococcus pneumoniae GA47901]
          Length = 66

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKASMVHSGDYKRIK 59


>gi|257867129|ref|ZP_05646782.1| ribosomal protein L35 [Enterococcus casseliflavus EC30]
 gi|257871008|ref|ZP_05650661.1| ribosomal protein L35 [Enterococcus gallinarum EG2]
 gi|257873463|ref|ZP_05653116.1| ribosomal protein L35 [Enterococcus casseliflavus EC10]
 gi|257877207|ref|ZP_05656860.1| ribosomal protein L35 [Enterococcus casseliflavus EC20]
 gi|325568472|ref|ZP_08144839.1| 50S ribosomal protein L35 [Enterococcus casseliflavus ATCC 12755]
 gi|257801185|gb|EEV30115.1| ribosomal protein L35 [Enterococcus casseliflavus EC30]
 gi|257805172|gb|EEV33994.1| ribosomal protein L35 [Enterococcus gallinarum EG2]
 gi|257807627|gb|EEV36449.1| ribosomal protein L35 [Enterococcus casseliflavus EC10]
 gi|257811373|gb|EEV40193.1| ribosomal protein L35 [Enterococcus casseliflavus EC20]
 gi|325158241|gb|EGC70394.1| 50S ribosomal protein L35 [Enterococcus casseliflavus ATCC 12755]
          Length = 66

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+    KR   T  G ++   A   H    ++ K  R  R   ++++ D K++ +
Sbjct: 1  MPKQKTHRGLAKRVKRTGGGGLKRFRAFTSHRFHGKTKKQRRQLRKASMVSAGDYKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|227510528|ref|ZP_03940577.1| ribosomal protein L35 [Lactobacillus brevis subsp. gravesensis
          ATCC 27305]
 gi|227513537|ref|ZP_03943586.1| ribosomal protein L35 [Lactobacillus buchneri ATCC 11577]
 gi|227524680|ref|ZP_03954729.1| ribosomal protein L35 [Lactobacillus hilgardii ATCC 8290]
 gi|227083410|gb|EEI18722.1| ribosomal protein L35 [Lactobacillus buchneri ATCC 11577]
 gi|227088164|gb|EEI23476.1| ribosomal protein L35 [Lactobacillus hilgardii ATCC 8290]
 gi|227190180|gb|EEI70247.1| ribosomal protein L35 [Lactobacillus brevis subsp. gravesensis
          ATCC 27305]
          Length = 64

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KTN ++ KRF  TA G +++  A   H    ++ K  R  RGT ++   + K   +
Sbjct: 1  MPKQKTNRAAAKRFKKTANGGIKSAHAYTSHRFHGKTKKQRRQLRGTHMMDHTNLKTYKK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|116328738|ref|YP_798458.1| 50S ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116330605|ref|YP_800323.1| 50S ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
 gi|122281640|sp|Q04U55|RL35_LEPBJ RecName: Full=50S ribosomal protein L35
 gi|122283477|sp|Q04ZH0|RL35_LEPBL RecName: Full=50S ribosomal protein L35
 gi|116121482|gb|ABJ79525.1| 50S Ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116124294|gb|ABJ75565.1| 50S Ribosomal protein L35 [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
          Length = 67

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T   K++ ++   RH + K+  K  R  RG  ++ ++D K ++R
Sbjct: 1  MPKLKTNRAAAKRFKFTKNNKIKRKSMNTRHILTKKGPKRRRRLRGLTLVNNSDWKSIVR 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LMPYGV 66


>gi|24379169|ref|NP_721124.1| 50S ribosomal protein L35 [Streptococcus mutans UA159]
 gi|290580827|ref|YP_003485219.1| 50S ribosomal protein L35 [Streptococcus mutans NN2025]
 gi|54036308|sp|Q8DV21|RL35_STRMU RecName: Full=50S ribosomal protein L35
 gi|24377077|gb|AAN58430.1|AE014913_7 50S ribosomal protein L35 [Streptococcus mutans UA159]
 gi|254997726|dbj|BAH88327.1| 50S ribosomal protein L35 [Streptococcus mutans NN2025]
          Length = 66

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T +G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHLRKASMVHSGDFKRIK 59


>gi|294636229|ref|ZP_06714643.1| ribosomal protein L35 [Edwardsiella tarda ATCC 23685]
 gi|291090486|gb|EFE23047.1| ribosomal protein L35 [Edwardsiella tarda ATCC 23685]
          Length = 59

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 8  SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
            + KRF  TA G  + + A  RH + K+S K  R+ R    ++  D   V+
Sbjct: 2  RGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKSQVSKGDLGLVV 53


>gi|15644339|ref|NP_229391.1| 50S ribosomal protein L35 [Thermotoga maritima MSB8]
 gi|170289043|ref|YP_001739281.1| ribosomal protein L35 [Thermotoga sp. RQ2]
 gi|7674320|sp|Q9X1S7|RL35_THEMA RecName: Full=50S ribosomal protein L35
 gi|226725078|sp|B1LBA0|RL35_THESQ RecName: Full=50S ribosomal protein L35
 gi|4982162|gb|AAD36658.1|AE001804_2 ribosomal protein L35 [Thermotoga maritima MSB8]
 gi|170176546|gb|ACB09598.1| ribosomal protein L35 [Thermotoga sp. RQ2]
          Length = 65

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN S+ KRF IT  GK+    A + H   K+    +R  R   V++SAD  +V+R
Sbjct: 1  MPKVKTNRSAAKRFRITKNGKIMRNHAYRSHKTGKKRRNALRALRKKDVVSSADKNRVLR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|24213943|ref|NP_711424.1| 50S ribosomal protein L35 [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45658304|ref|YP_002390.1| 50S ribosomal protein L35 [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|54036271|sp|Q72PK9|RL35_LEPIC RecName: Full=50S ribosomal protein L35
 gi|54036313|sp|Q8F6Q8|RL35_LEPIN RecName: Full=50S ribosomal protein L35
 gi|24194800|gb|AAN48442.1| 50S ribosomal protein L35 [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45601546|gb|AAS71027.1| 50S ribosomal protein L35 [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 67

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KTN ++ KRF  T   K++ ++   RH + K+  K  R  RG  ++ ++D K ++R
Sbjct: 1  MPKLKTNRAAAKRFKFTKNNKIKRKSMNTRHILTKKGPKRRRRLRGLTLVHNSDWKSIVR 60

Query: 61 NYLPNGI 67
            +P G+
Sbjct: 61 -LMPYGV 66


>gi|28411209|emb|CAD24035.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 75

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 31/56 (55%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KMKT+ +S KRF +T  GK+  + AG +H + K++ K  +     + +  +D   V
Sbjct: 6  KMKTHKASAKRFRVTGRGKIVRRCAGTQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 61


>gi|226355445|ref|YP_002785185.1| 50S ribosomal protein L35 [Deinococcus deserti VCD115]
 gi|259647348|sp|C1D0Q7|RL35_DEIDV RecName: Full=50S ribosomal protein L35
 gi|226317435|gb|ACO45431.1| putative 50S ribosomal protein L35 [Deinococcus deserti VCD115]
          Length = 66

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ +R  IT TGKV A  +GKRH    +S   IR      VLA ++  + ++
Sbjct: 1  MPKMKTLKSASRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKSEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 LMLPKG 65


>gi|331006133|ref|ZP_08329462.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC1989]
 gi|330420057|gb|EGG94394.1| LSU ribosomal protein L35p [gamma proteobacterium IMCC1989]
          Length = 64

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++ + D   + R
Sbjct: 1  MAKAKVHSGAAKRFKKTAAG-YKRKSAHKSHILTKMTTKRKRQLRGTSLVTAVDKPLIDR 59

Query: 61 NY 62
           +
Sbjct: 60 MF 61


>gi|126667902|ref|ZP_01738867.1| ribosomal protein L35 [Marinobacter sp. ELB17]
 gi|126627562|gb|EAZ98194.1| ribosomal protein L35 [Marinobacter sp. ELB17]
          Length = 65

 Score = 50.1 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT S + KRF  TATG  + +++   H + K+S K  R  RGT +++ +D   V R  
Sbjct: 5  KMKTKSGAAKRFKKTATG-FKHKSSFTSHILTKKSPKRKRQLRGTKLISKSDVASVKRML 63


>gi|116618537|ref|YP_818908.1| 50S ribosomal protein L35P [Leuconostoc mesenteroides subsp.
          mesenteroides ATCC 8293]
 gi|227431922|ref|ZP_03913944.1| ribosomal protein L35 [Leuconostoc mesenteroides subsp. cremoris
          ATCC 19254]
 gi|122271263|sp|Q03W87|RL35_LEUMM RecName: Full=50S ribosomal protein L35
 gi|116097384|gb|ABJ62535.1| LSU ribosomal protein L35P [Leuconostoc mesenteroides subsp.
          mesenteroides ATCC 8293]
 gi|227352326|gb|EEJ42530.1| ribosomal protein L35 [Leuconostoc mesenteroides subsp. cremoris
          ATCC 19254]
          Length = 65

 Score = 50.1 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R  RGT ++ S   K   +
Sbjct: 1  MPKMKTHRASAKRFKKTANGGLKSASAYTSHRFHGKTKKQRRQLRGTRMMDSTTVKTYAK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|149179190|ref|ZP_01857757.1| hypothetical protein PM8797T_17469 [Planctomyces maris DSM 8797]
 gi|148841963|gb|EDL56359.1| hypothetical protein PM8797T_17469 [Planctomyces maris DSM 8797]
          Length = 57

 Score = 50.1 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 10 SKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLP 64
           KKRF ITA+GK + + A + H + K+S K     RG  ++  A+AK ++    P
Sbjct: 1  MKKRFKITASGKAKHRKAFRGHILSKKSPKRKIRLRGDGIVTGAEAKLIVNALRP 55


>gi|312143807|ref|YP_003995253.1| ribosomal protein L35 [Halanaerobium sp. 'sapolanicus']
 gi|311904458|gb|ADQ14899.1| ribosomal protein L35 [Halanaerobium sp. 'sapolanicus']
          Length = 65

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+    KR   TA+GK++       H + K+S K  R  R   +L     K+  +
Sbjct: 1  MPKIKTHKGIAKRVKTTASGKIKRHKGFHSHILTKKSGKRKRKLRKATMLDKTYQKR-YK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KLLPY 64


>gi|315453309|ref|YP_004073579.1| 50S ribosomal protein L35 [Helicobacter felis ATCC 49179]
 gi|315132361|emb|CBY82989.1| 50S ribosomal protein L35 [Helicobacter felis ATCC 49179]
          Length = 64

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF +  +  ++  +A K H + K+S +   N      +   +   V
Sbjct: 1  MPKMKTNRGAAKRFKVKKS-LIKRGSAFKSHILTKKSPQRKANLNSPHYVHPTNLHSV 57


>gi|148544464|ref|YP_001271834.1| 50S ribosomal protein L35 [Lactobacillus reuteri DSM 20016]
 gi|184153829|ref|YP_001842170.1| 50S ribosomal protein L35 [Lactobacillus reuteri JCM 1112]
 gi|194466646|ref|ZP_03072633.1| ribosomal protein L35 [Lactobacillus reuteri 100-23]
 gi|227363108|ref|ZP_03847243.1| ribosomal protein L35 [Lactobacillus reuteri MM2-3]
 gi|227543933|ref|ZP_03973982.1| ribosomal protein L35 [Lactobacillus reuteri CF48-3A]
 gi|300909682|ref|ZP_07127143.1| 50S ribosomal protein L35 [Lactobacillus reuteri SD2112]
 gi|325682786|ref|ZP_08162302.1| 50S ribosomal protein L35 [Lactobacillus reuteri MM4-1A]
 gi|166988035|sp|A5VKX3|RL35_LACRD RecName: Full=50S ribosomal protein L35
 gi|226725025|sp|B2G8A8|RL35_LACRJ RecName: Full=50S ribosomal protein L35
 gi|148531498|gb|ABQ83497.1| LSU ribosomal protein L35P [Lactobacillus reuteri DSM 20016]
 gi|183225173|dbj|BAG25690.1| 50S ribosomal protein L35 [Lactobacillus reuteri JCM 1112]
 gi|194453682|gb|EDX42579.1| ribosomal protein L35 [Lactobacillus reuteri 100-23]
 gi|227071826|gb|EEI10114.1| ribosomal protein L35 [Lactobacillus reuteri MM2-3]
 gi|227186084|gb|EEI66155.1| ribosomal protein L35 [Lactobacillus reuteri CF48-3A]
 gi|300893547|gb|EFK86906.1| 50S ribosomal protein L35 [Lactobacillus reuteri SD2112]
 gi|324977136|gb|EGC14087.1| 50S ribosomal protein L35 [Lactobacillus reuteri MM4-1A]
          Length = 65

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+N ++ KRF  TA G  ++  +   H    ++ K  R  RG  ++   + K+  +
Sbjct: 1  MPKMKSNRAAAKRFKRTANGGFKSGNSFTSHRFHGKTKKQRRQLRGLSMMDKTNVKRYKK 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|237750835|ref|ZP_04581315.1| 50S ribosomal protein L35 [Helicobacter bilis ATCC 43879]
 gi|229373280|gb|EEO23671.1| 50S ribosomal protein L35 [Helicobacter bilis ATCC 43879]
          Length = 64

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     V+  +A K H + K+S K          +   +   V 
Sbjct: 1  MPKMKTNRGAAKRFKVKKNA-VKRGSAFKSHILTKKSPKRKARLNSPHYVHDTNLDSVK 58


>gi|302838813|ref|XP_002950964.1| plastid/chloroplast ribosomal protein L35 [Volvox carteri f.
           nagariensis]
 gi|300263659|gb|EFJ47858.1| plastid/chloroplast ribosomal protein L35 [Volvox carteri f.
           nagariensis]
          Length = 118

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 14  FSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
           F +T +GK+  + +GK+H   K S   IR+      L+ A+     +  LPN
Sbjct: 63  FKVTGSGKIMGRKSGKQHFNEKMSRDQIRDLSKMFTLSPANVYNATKC-LPN 113


>gi|167957094|ref|ZP_02544168.1| hypothetical protein cdiviTM7_00366 [candidate division TM7
          single-cell isolate TM7c]
          Length = 64

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+  + KR  +T+TGK+  Q A   H + K+S    R    T  +  + AK   R
Sbjct: 1  MPKLKTHKGTAKRIKLTSTGKLTRQRAFGGHFLAKKSKSRKRAINTTATVTGSMAKNARR 60

Query: 61 NY 62
            
Sbjct: 61 AM 62


>gi|29375499|ref|NP_814653.1| 50S ribosomal protein L35 [Enterococcus faecalis V583]
 gi|227517834|ref|ZP_03947883.1| 50S ribosomal protein L35 [Enterococcus faecalis TX0104]
 gi|227555026|ref|ZP_03985073.1| 50S ribosomal protein L35 [Enterococcus faecalis HH22]
 gi|229546759|ref|ZP_04435484.1| 50S ribosomal protein L35 [Enterococcus faecalis TX1322]
 gi|229548851|ref|ZP_04437576.1| 50S ribosomal protein L35 [Enterococcus faecalis ATCC 29200]
 gi|255971365|ref|ZP_05421951.1| ribosomal protein L35 [Enterococcus faecalis T1]
 gi|255973984|ref|ZP_05424570.1| ribosomal protein L35 [Enterococcus faecalis T2]
 gi|256617783|ref|ZP_05474629.1| ribosomal protein L35 [Enterococcus faecalis ATCC 4200]
 gi|256761669|ref|ZP_05502249.1| ribosomal protein L35 [Enterococcus faecalis T3]
 gi|256854242|ref|ZP_05559606.1| ribosomal protein L35 [Enterococcus faecalis T8]
 gi|256957229|ref|ZP_05561400.1| ribosomal protein L35 [Enterococcus faecalis DS5]
 gi|256960040|ref|ZP_05564211.1| 50S ribosomal protein L35 [Enterococcus faecalis Merz96]
 gi|256964266|ref|ZP_05568437.1| 50S ribosomal protein L35 [Enterococcus faecalis HIP11704]
 gi|257077799|ref|ZP_05572160.1| 50S ribosomal protein L35 [Enterococcus faecalis JH1]
 gi|257081158|ref|ZP_05575519.1| ribosomal protein L35 [Enterococcus faecalis E1Sol]
 gi|257083827|ref|ZP_05578188.1| 50S ribosomal protein L35 [Enterococcus faecalis Fly1]
 gi|257086252|ref|ZP_05580613.1| ribosomal protein L35 [Enterococcus faecalis D6]
 gi|257089325|ref|ZP_05583686.1| 50S ribosomal protein L35 [Enterococcus faecalis CH188]
 gi|257415477|ref|ZP_05592471.1| ribosomal protein L35 [Enterococcus faecalis AR01/DG]
 gi|257418509|ref|ZP_05595503.1| 50S ribosomal protein L35 [Enterococcus faecalis T11]
 gi|257421159|ref|ZP_05598149.1| 50S ribosomal protein L35 [Enterococcus faecalis X98]
 gi|293383793|ref|ZP_06629700.1| ribosomal protein L35 [Enterococcus faecalis R712]
 gi|293388731|ref|ZP_06633224.1| ribosomal protein L35 [Enterococcus faecalis S613]
 gi|294781325|ref|ZP_06746671.1| ribosomal protein L35 [Enterococcus faecalis PC1.1]
 gi|300859677|ref|ZP_07105765.1| ribosomal protein L35 [Enterococcus faecalis TUSoD Ef11]
 gi|307267990|ref|ZP_07549378.1| ribosomal protein L35 [Enterococcus faecalis TX4248]
 gi|307271914|ref|ZP_07553182.1| ribosomal protein L35 [Enterococcus faecalis TX0855]
 gi|307275332|ref|ZP_07556475.1| ribosomal protein L35 [Enterococcus faecalis TX2134]
 gi|307278390|ref|ZP_07559465.1| ribosomal protein L35 [Enterococcus faecalis TX0860]
 gi|307286722|ref|ZP_07566808.1| ribosomal protein L35 [Enterococcus faecalis TX0109]
 gi|307290931|ref|ZP_07570821.1| ribosomal protein L35 [Enterococcus faecalis TX0411]
 gi|312901543|ref|ZP_07760816.1| ribosomal protein L35 [Enterococcus faecalis TX0470]
 gi|312904475|ref|ZP_07763634.1| ribosomal protein L35 [Enterococcus faecalis TX0635]
 gi|312906991|ref|ZP_07765987.1| ribosomal protein L35 [Enterococcus faecalis DAPTO 512]
 gi|312952818|ref|ZP_07771680.1| ribosomal protein L35 [Enterococcus faecalis TX0102]
 gi|312978751|ref|ZP_07790478.1| ribosomal protein L35 [Enterococcus faecalis DAPTO 516]
 gi|54036302|sp|Q837C8|RL35_ENTFA RecName: Full=50S ribosomal protein L35
 gi|29342959|gb|AAO80723.1| ribosomal protein L35 [Enterococcus faecalis V583]
 gi|227074724|gb|EEI12687.1| 50S ribosomal protein L35 [Enterococcus faecalis TX0104]
 gi|227175852|gb|EEI56824.1| 50S ribosomal protein L35 [Enterococcus faecalis HH22]
 gi|229306080|gb|EEN72076.1| 50S ribosomal protein L35 [Enterococcus faecalis ATCC 29200]
 gi|229308108|gb|EEN74095.1| 50S ribosomal protein L35 [Enterococcus faecalis TX1322]
 gi|255962383|gb|EET94859.1| ribosomal protein L35 [Enterococcus faecalis T1]
 gi|255966856|gb|EET97478.1| ribosomal protein L35 [Enterococcus faecalis T2]
 gi|256597310|gb|EEU16486.1| ribosomal protein L35 [Enterococcus faecalis ATCC 4200]
 gi|256682920|gb|EEU22615.1| ribosomal protein L35 [Enterococcus faecalis T3]
 gi|256709802|gb|EEU24846.1| ribosomal protein L35 [Enterococcus faecalis T8]
 gi|256947725|gb|EEU64357.1| ribosomal protein L35 [Enterococcus faecalis DS5]
 gi|256950536|gb|EEU67168.1| 50S ribosomal protein L35 [Enterococcus faecalis Merz96]
 gi|256954762|gb|EEU71394.1| 50S ribosomal protein L35 [Enterococcus faecalis HIP11704]
 gi|256985829|gb|EEU73131.1| 50S ribosomal protein L35 [Enterococcus faecalis JH1]
 gi|256989188|gb|EEU76490.1| ribosomal protein L35 [Enterococcus faecalis E1Sol]
 gi|256991857|gb|EEU79159.1| 50S ribosomal protein L35 [Enterococcus faecalis Fly1]
 gi|256994282|gb|EEU81584.1| ribosomal protein L35 [Enterococcus faecalis D6]
 gi|256998137|gb|EEU84657.1| 50S ribosomal protein L35 [Enterococcus faecalis CH188]
 gi|257157305|gb|EEU87265.1| ribosomal protein L35 [Enterococcus faecalis ARO1/DG]
 gi|257160337|gb|EEU90297.1| 50S ribosomal protein L35 [Enterococcus faecalis T11]
 gi|257162983|gb|EEU92943.1| 50S ribosomal protein L35 [Enterococcus faecalis X98]
 gi|291078869|gb|EFE16233.1| ribosomal protein L35 [Enterococcus faecalis R712]
 gi|291081888|gb|EFE18851.1| ribosomal protein L35 [Enterococcus faecalis S613]
 gi|294451661|gb|EFG20117.1| ribosomal protein L35 [Enterococcus faecalis PC1.1]
 gi|295113894|emb|CBL32531.1| LSU ribosomal protein L35P [Enterococcus sp. 7L76]
 gi|300850495|gb|EFK78244.1| ribosomal protein L35 [Enterococcus faecalis TUSoD Ef11]
 gi|306498001|gb|EFM67528.1| ribosomal protein L35 [Enterococcus faecalis TX0411]
 gi|306502200|gb|EFM71484.1| ribosomal protein L35 [Enterococcus faecalis TX0109]
 gi|306504896|gb|EFM74091.1| ribosomal protein L35 [Enterococcus faecalis TX0860]
 gi|306507966|gb|EFM77093.1| ribosomal protein L35 [Enterococcus faecalis TX2134]
 gi|306511420|gb|EFM80422.1| ribosomal protein L35 [Enterococcus faecalis TX0855]
 gi|306515631|gb|EFM84158.1| ribosomal protein L35 [Enterococcus faecalis TX4248]
 gi|310626976|gb|EFQ10259.1| ribosomal protein L35 [Enterococcus faecalis DAPTO 512]
 gi|310629334|gb|EFQ12617.1| ribosomal protein L35 [Enterococcus faecalis TX0102]
 gi|310632173|gb|EFQ15456.1| ribosomal protein L35 [Enterococcus faecalis TX0635]
 gi|311288458|gb|EFQ67014.1| ribosomal protein L35 [Enterococcus faecalis DAPTO 516]
 gi|311291338|gb|EFQ69894.1| ribosomal protein L35 [Enterococcus faecalis TX0470]
 gi|315027100|gb|EFT39032.1| ribosomal protein L35 [Enterococcus faecalis TX2137]
 gi|315029785|gb|EFT41717.1| ribosomal protein L35 [Enterococcus faecalis TX4000]
 gi|315032456|gb|EFT44388.1| ribosomal protein L35 [Enterococcus faecalis TX0017]
 gi|315034310|gb|EFT46242.1| ribosomal protein L35 [Enterococcus faecalis TX0027]
 gi|315145798|gb|EFT89814.1| ribosomal protein L35 [Enterococcus faecalis TX2141]
 gi|315148072|gb|EFT92088.1| ribosomal protein L35 [Enterococcus faecalis TX4244]
 gi|315149674|gb|EFT93690.1| ribosomal protein L35 [Enterococcus faecalis TX0012]
 gi|315152987|gb|EFT97003.1| ribosomal protein L35 [Enterococcus faecalis TX0031]
 gi|315155218|gb|EFT99234.1| ribosomal protein L35 [Enterococcus faecalis TX0043]
 gi|315157545|gb|EFU01562.1| ribosomal protein L35 [Enterococcus faecalis TX0312]
 gi|315163026|gb|EFU07043.1| ribosomal protein L35 [Enterococcus faecalis TX0645]
 gi|315165225|gb|EFU09242.1| ribosomal protein L35 [Enterococcus faecalis TX1302]
 gi|315167950|gb|EFU11967.1| ribosomal protein L35 [Enterococcus faecalis TX1341]
 gi|315172017|gb|EFU16034.1| ribosomal protein L35 [Enterococcus faecalis TX1342]
 gi|315174842|gb|EFU18859.1| ribosomal protein L35 [Enterococcus faecalis TX1346]
 gi|315574172|gb|EFU86363.1| ribosomal protein L35 [Enterococcus faecalis TX0309B]
 gi|315577303|gb|EFU89494.1| ribosomal protein L35 [Enterococcus faecalis TX0630]
 gi|315581685|gb|EFU93876.1| ribosomal protein L35 [Enterococcus faecalis TX0309A]
 gi|323480095|gb|ADX79534.1| ribosomal protein L35 [Enterococcus faecalis 62]
 gi|327534495|gb|AEA93329.1| 50S ribosomal protein L35 [Enterococcus faecalis OG1RF]
 gi|329577911|gb|EGG59332.1| ribosomal protein L35 [Enterococcus faecalis TX1467]
          Length = 66

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+    KR   T  G ++   A   H    ++ K  R  R   ++A  D K++ +
Sbjct: 1  MPKQKTHRGLAKRVKRTGGGGLKRGRAFTSHRFHGKTKKQRRQLRKASMVAKGDYKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|332637332|ref|ZP_08416195.1| 50S ribosomal protein L35 [Weissella cibaria KACC 11862]
          Length = 64

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+ +S KRF  TA G +++  A   H    ++ K  R  RGT ++ +   K
Sbjct: 1  MPKFKTHRASAKRFKKTANGGLKSGNAFTSHRFHGKTKKQRRQLRGTSMMNNTTLK 56


>gi|332686211|ref|YP_004455985.1| 50S ribosomal protein L35p [Melissococcus plutonius ATCC 35311]
 gi|332370220|dbj|BAK21176.1| LSU ribosomal protein L35p [Melissococcus plutonius ATCC 35311]
          Length = 66

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+  S KRF  T  G ++   A   H    ++ K  R  R   ++++ D K++ +
Sbjct: 1  MPKQKTHRGSVKRFKRTGKGGLKRFRAFTSHRFHGKTKKQRRQLRKASMVSTGDYKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|119952987|ref|YP_945196.1| 50S ribosomal protein L35 [Borrelia turicatae 91E135]
 gi|254802435|sp|A1QYY4|RL35_BORT9 RecName: Full=50S ribosomal protein L35
 gi|119861758|gb|AAX17526.1| LSU ribosomal protein L35P [Borrelia turicatae 91E135]
          Length = 65

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT  S+KKR++ T+ GK++ +    RH + K+S+K  R    + +++S + K++ +
Sbjct: 1  MSKMKTCKSAKKRYAFTSKGKIKYKKQNLRHILTKKSSKRRRKLGKSGLVSSFEVKRI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TLLPY 64


>gi|33519813|ref|NP_878645.1| 50S ribosomal protein L35 [Candidatus Blochmannia floridanus]
 gi|54036294|sp|Q7VR69|RL35_BLOFL RecName: Full=50S ribosomal protein L35
 gi|33504158|emb|CAD83420.1| 50S ribosomal subunit protein L35 [Candidatus Blochmannia
          floridanus]
          Length = 65

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT+ S+ KRF   ++ K + + A  RH + K+S K  R+ R   +L+  + +K+++
Sbjct: 1  MPKIKTSRSASKRFKRLSSNKYKFKHAYARHILTKKSTKHKRHLRIKSILSKKNNRKIMK 60

Query: 61 NYLPN 65
           YLP 
Sbjct: 61 -YLPY 64


>gi|326693741|ref|ZP_08230746.1| 50S ribosomal protein L35 [Leuconostoc argentinum KCTC 3773]
          Length = 65

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+ +S KRF  TA G +++ +A   H    ++ K  R+ RGT ++     K   +
Sbjct: 1  MPKMKTHRASAKRFKKTAHGGLKSASAYTSHRFHGKTKKQRRHLRGTHMMDKTTVKTYAK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|29726815|pdb|1NWX|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Abt-773
 gi|29726846|pdb|1NWY|3 Chain 3, Complex Of The Large Ribosomal Subunit From Deinococcus
          Radiodurans With Azithromycin
 gi|61680363|pdb|1XBP|3 Chain 3, Inhibition Of Peptide Bond Formation By Pleuromutilins:
          The Structure Of The 50s Ribosomal Subunit From
          Deinococcus Radiodurans In Complex With Tiamulin
          Length = 65

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++ 
Sbjct: 1  PKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MKL 59

Query: 62 YLPNG 66
           LP G
Sbjct: 60 MLPRG 64


>gi|326496939|dbj|BAJ98496.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326506240|dbj|BAJ86438.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512512|dbj|BAJ99611.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522891|dbj|BAJ88491.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 158

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK  SS K RF     G++R   AGKRH   ++S +  R  R   ++  A AK + +
Sbjct: 96  KMKAPSSMKFRFRTMKDGQIRRWRAGKRHNAHQKSKEAKRRLRKPALVHLAYAKVIKK 153


>gi|227501359|ref|ZP_03931408.1| ribosomal protein L35 [Anaerococcus tetradius ATCC 35098]
 gi|227216458|gb|EEI81868.1| ribosomal protein L35 [Anaerococcus tetradius ATCC 35098]
          Length = 72

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K KT  ++ KRF +T +GK+  + A K H   K+S    R  R   +++S++ K V 
Sbjct: 11 KNKTRRAAVKRFKVTGSGKIMRRKAYKGHLTAKKSPNRKRRLRKATIVSSSEMKNVR 67


>gi|222099842|ref|YP_002534410.1| 50S ribosomal protein L35 [Thermotoga neapolitana DSM 4359]
 gi|254799884|sp|B9K7W1|RL35_THENN RecName: Full=50S ribosomal protein L35
 gi|221572232|gb|ACM23044.1| 50S ribosomal protein L35 [Thermotoga neapolitana DSM 4359]
          Length = 65

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN S+ KRF +T  GK+    A K H   K+    +R  R   V++SAD  +V+R
Sbjct: 1  MPKMKTNRSAAKRFRVTRKGKIIRNHAYKSHKTRKKRRNVLRALRKKDVVSSADKNRVLR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|54020113|ref|YP_115770.1| 50S ribosomal protein L35 [Mycoplasma hyopneumoniae 232]
 gi|161611223|ref|YP_278923.2| 50S ribosomal protein L35 [Mycoplasma hyopneumoniae J]
 gi|161611230|ref|YP_287522.2| 50S ribosomal protein L35 [Mycoplasma hyopneumoniae 7448]
 gi|81680607|sp|Q601E5|RL35_MYCH2 RecName: Full=50S ribosomal protein L35
 gi|148887084|sp|Q4AAK9|RL35_MYCHJ RecName: Full=50S ribosomal protein L35
 gi|158563880|sp|Q4A8P0|RL35_MYCH7 RecName: Full=50S ribosomal protein L35
 gi|53987286|gb|AAV27487.1| 50s ribosomal protein L35 [Mycoplasma hyopneumoniae 232]
 gi|144227474|gb|AAZ44212.2| 50s ribosomal protein L35 [Mycoplasma hyopneumoniae J]
 gi|144575286|gb|AAZ53499.2| 50s ribosomal protein L35 [Mycoplasma hyopneumoniae 7448]
 gi|312601139|gb|ADQ90394.1| 50S ribosomal protein L35 [Mycoplasma hyopneumoniae 168]
          Length = 64

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K KT S+ KKR  +T TGKV+   A + H    ++ K  R +R + ++ ++D K++ +
Sbjct: 5  KFKTKSALKKRIKVTGTGKVKHGHAYRSHLAQSKTTKQKRQSRKSTLMNNSDFKRLKK 62


>gi|254494956|ref|ZP_01052788.2| 50S ribosomal protein L35 [Polaribacter sp. MED152]
 gi|213690538|gb|EAQ42216.2| 50S ribosomal protein L35 [Polaribacter sp. MED152]
          Length = 62

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MKT SS+KKRF +T TGK++ + A K H + K+S K         ++  +D   + +  
Sbjct: 1  MKTKSSAKKRFKVTGTGKIKRKHAFKSHILTKKSKKRKLKLTHDTLVHKSDEPSIKQML 59


>gi|34811582|pdb|1PNU|3 Chain 3, Crystal Structure Of A Streptomycin Dependent Ribosome
          From Escherichia Coli, 50s Subunit Of 70s Ribosome.
          This File, 1pnu, Contains Only Molecules Of The 50s
          Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna,
          And A-Site Trna Are In The Pdb File 1pns.
 gi|34811635|pdb|1PNY|3 Chain 3, Crystal Structure Of The Wild Type Ribosome From E.
          Coli, 50s Subunit Of 70s Ribosome. This File, 1pny,
          Contains Only Molecules Of The 50s Ribosomal Subunit.
          The 30s Subunit Is In The Pdb File 1pnx.
 gi|56966373|pdb|1VOR|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966426|pdb|1VOU|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966479|pdb|1VOW|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966532|pdb|1VOY|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400.
 gi|56966585|pdb|1VP0|5 Chain 5, Crystal Structure Of Five 70s Ribosomes From Escherichia
          Coli In Complex With Protein Y. This File Contains The
          50s Subunit Of One 70s Ribosome. The Entire Crystal
          Structure Contains Five 70s Ribosomes And Is Described
          In Remark 400
          Length = 63

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          PKMKT+  +K+R  IT TGKV A  +GKRH    +S   IR      VLA A+  + ++ 
Sbjct: 1  PKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWAR-MKL 59

Query: 62 YLP 64
           LP
Sbjct: 60 MLP 62


>gi|156388952|ref|XP_001634756.1| predicted protein [Nematostella vectensis]
 gi|156221843|gb|EDO42693.1| predicted protein [Nematostella vectensis]
          Length = 167

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KT  +  KR   T TGK++    GK H MIK+ +K  R  R    ++    K + +  
Sbjct: 105 KRKTCKAVAKRVIRTGTGKLKRWKCGKTHNMIKKRSKNRRQLRKHTYVSKTQLKLLNKML 164


>gi|161611232|ref|YP_278725.2| 50S ribosomal protein L35 [Mycoplasma synoviae 53]
 gi|118573014|sp|Q4A5F7|RL35_MYCS5 RecName: Full=50S ribosomal protein L35
          Length = 62

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT S+ KKR  +TATGK++ + A + H    ++ K  R +R    +  +D K+  
Sbjct: 1  MPKMKTKSALKKRVKVTATGKIKREQAFRSHLAQNKTKKQKRQSRKASFMKRSDFKRFK 59


>gi|294056503|ref|YP_003550161.1| ribosomal protein L35 [Coraliomargarita akajimensis DSM 45221]
 gi|293615836|gb|ADE55991.1| ribosomal protein L35 [Coraliomargarita akajimensis DSM 45221]
          Length = 82

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KT  S  KRF  T TGK+  +  G RH +  +S K  R A  + ++A      +IR  
Sbjct: 21 QKTRKSIAKRFKKTGTGKLLRRTPGHRHLLRNKSVKQRRRAGSSKLVADGQRADLIRAL 79


>gi|256545524|ref|ZP_05472884.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170]
 gi|256398735|gb|EEU12352.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170]
          Length = 66

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT  ++ KRF +T +GK++   A K H   K++    R  R + + +  D K + R  
Sbjct: 5  KIKTKRAAAKRFKVTGSGKIKRHKAYKGHLTAKKTPARKRRLRKSTMASKGDTKNIKRLL 64


>gi|188997587|ref|YP_001931838.1| ribosomal protein L35 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226725074|sp|B2V6V2|RL35_SULSY RecName: Full=50S ribosomal protein L35
 gi|188932654|gb|ACD67284.1| ribosomal protein L35 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 68

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN ++ KR  ITATGKV+    G  H   K+S+K  R  R    +      KV +  
Sbjct: 5  KMKTNRTAAKRLKITATGKVKYTKGGVSHYNTKKSSKRKRQGRKPQYVPKNLEHKV-KAL 63

Query: 63 LPN 65
          LPN
Sbjct: 64 LPN 66


>gi|320335392|ref|YP_004172103.1| 50S ribosomal protein L35 [Deinococcus maricopensis DSM 21211]
 gi|319756681|gb|ADV68438.1| 50S ribosomal protein L35 [Deinococcus maricopensis DSM 21211]
          Length = 66

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT  S+ +R  ITATGKV A  +GKRH    +S   IR      VLA ++  + ++
Sbjct: 1  MPKQKTKKSATRRIKITATGKVMAFKSGKRHQNTGKSGDEIRGKGQGFVLAKSEWAR-MK 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 AMLPKG 65


>gi|34557220|ref|NP_907035.1| 50S ribosomal protein L35 [Wolinella succinogenes DSM 1740]
 gi|54036280|sp|Q7M9L8|RL35_WOLSU RecName: Full=50S ribosomal protein L35
 gi|34482936|emb|CAE09935.1| 50S RIBOSOMAL PROTEIN [Wolinella succinogenes]
          Length = 64

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +     ++  +A K H + K+S K          +  A+   + +
Sbjct: 1  MPKMKTNRGAAKRFKLKKN-LIKRGSAFKSHILTKKSAKRKAGLNEPKYVNDANLDSIKK 59

Query: 61 NY 62
            
Sbjct: 60 LL 61


>gi|322380798|ref|ZP_08054904.1| 50S ribosomal protein L35 [Helicobacter suis HS5]
 gi|321146802|gb|EFX41596.1| 50S ribosomal protein L35 [Helicobacter suis HS5]
          Length = 64

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMKTN  + KRF +     ++  +A K H + K+S +   N      + + + + V
Sbjct: 1  MPKMKTNRGAAKRFKVKKN-LIKRGSAFKSHILTKKSPQRKANLNAPHYVHATNLRSV 57


>gi|311115049|ref|YP_003986270.1| 50S ribosomal protein L35 [Gardnerella vaginalis ATCC 14019]
 gi|310946543|gb|ADP39247.1| 50S ribosomal protein L35 [Gardnerella vaginalis ATCC 14019]
          Length = 61

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MKTNS++ KR  +T TGKV    +  RH +  +S +  R      VLA+A +K + 
Sbjct: 1  MKTNSAASKRVRLTGTGKVMHDGSAMRHNLEHKSARKRRALSADKVLATAQSKNLK 56


>gi|254481763|ref|ZP_05095006.1| ribosomal protein L35 [marine gamma proteobacterium HTCC2148]
 gi|214037892|gb|EEB78556.1| ribosomal protein L35 [marine gamma proteobacterium HTCC2148]
          Length = 64

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++   D   + R
Sbjct: 1  MSKAKVHSGAAKRFKKTAGG-YKRKSANKSHILTKMTTKRKRQLRGTSMIDKNDVVLIDR 59

Query: 61 NY 62
            
Sbjct: 60 MM 61


>gi|148536299|gb|ABQ85702.1| 50S ribosomal protein L35 [Mycoplasma fermentans]
          Length = 66

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA 44
          MPKMKT S+ KKR  IT TGK+  + A + H    ++ K  R A
Sbjct: 23 MPKMKTKSALKKRIKITGTGKIMREQAYRSHLSQNKTTKQKRQA 66


>gi|325479644|gb|EGC82736.1| ribosomal protein L35 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 65

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K KT  ++ KRF +T +GKV  + A K H   K+S    R  R   V++S + K V 
Sbjct: 4  KNKTRRAAVKRFKVTGSGKVMRRKAYKGHLTAKKSPNRKRRLRKATVVSSTELKNVK 60


>gi|256847508|ref|ZP_05552954.1| ribosomal protein L35 [Lactobacillus coleohominis 101-4-CHN]
 gi|256716172|gb|EEU31147.1| ribosomal protein L35 [Lactobacillus coleohominis 101-4-CHN]
          Length = 65

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN ++ KRF  TA G  ++  +   H    ++ K  R  RG  +L   + K+  +
Sbjct: 1  MPKMKTNRAAAKRFKRTAKGGFKSGNSFTSHRFHGKTKKQRRQLRGLSMLDKTNVKRFKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|10177933|dbj|BAB11198.1| unnamed protein product [Arabidopsis thaliana]
          Length = 262

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 25/54 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
           K+K  SS K RF     G +R    GKRH    +S K  R  R   ++  A AK
Sbjct: 111 KIKFYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAK 164


>gi|148655187|ref|YP_001275392.1| 50S ribosomal protein L35 [Roseiflexus sp. RS-1]
 gi|148567297|gb|ABQ89442.1| LSU ribosomal protein L35P [Roseiflexus sp. RS-1]
          Length = 70

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  + KRF +T +GK+   A  + H   + S + +++   T  +  +  +++ R
Sbjct: 1  MPKMKTHKGAAKRFRLTGSGKMVRTAGRRGHFRRRMSLRILQHLDRTFEVHKSVQRRLRR 60

Query: 61 NYLPN 65
            LP 
Sbjct: 61 A-LPY 64


>gi|42523127|ref|NP_968507.1| 50S ribosomal protein L35 [Bdellovibrio bacteriovorus HD100]
 gi|54036263|sp|Q6MMK4|RL35_BDEBA RecName: Full=50S ribosomal protein L35
 gi|39575332|emb|CAE79500.1| 50S ribosomal protein L35 [Bdellovibrio bacteriovorus HD100]
          Length = 63

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KM+T+S +KKR  + ++GKV+ ++   RH     S+K  R    T  +  A+  +V R  
Sbjct: 2  KMRTHSGAKKRLKVLSSGKVKKKSTRMRHLNSHMSSKTKRQLGKTSYVEDANMLQVRRCL 61


>gi|241894788|ref|ZP_04782084.1| ribosomal protein L35 [Weissella paramesenteroides ATCC 33313]
 gi|241872000|gb|EER75751.1| ribosomal protein L35 [Weissella paramesenteroides ATCC 33313]
          Length = 64

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          MPK KT+ +S KRF  TA G +++  A   H    ++ K  R  RGT ++     K
Sbjct: 1  MPKYKTHRASAKRFKKTANGGLKSANAYTSHRFHGKTKKQRRQLRGTSMMNHTTLK 56


>gi|225166106|ref|ZP_03727837.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
 gi|224799648|gb|EEG18146.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
          Length = 64

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           KT  S  KRF +TA GK+  +  G RH +  +S K  R A    ++A   A  + R  L
Sbjct: 2  QKTKKSVAKRFKLTAKGKLVRRTPGFRHLLASKSTKQKRRASQDKLVAEGHAAPLKRC-L 60

Query: 64 PNGI 67
          P G+
Sbjct: 61 PFGL 64


>gi|325283502|ref|YP_004256043.1| 50S ribosomal protein L35 [Deinococcus proteolyticus MRP]
 gi|324315311|gb|ADY26426.1| 50S ribosomal protein L35 [Deinococcus proteolyticus MRP]
          Length = 68

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S+ +R  ITATGKV A  +GKRH    +S   IR      VLA ++  + ++
Sbjct: 1  MPKMKTKKSAVRRIKITATGKVMAFKSGKRHQNTGKSGNEIRGKGKGFVLAKSEWAR-MK 59

Query: 61 NYLPN 65
             P 
Sbjct: 60 AMKPY 64


>gi|257459996|ref|ZP_05625100.1| ribosomal protein L35 [Campylobacter gracilis RM3268]
 gi|257442437|gb|EEV17576.1| ribosomal protein L35 [Campylobacter gracilis RM3268]
          Length = 63

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+   + KRF      K++  +A + H + K S K  RN R    + S +   V +
Sbjct: 1  MPKMKSVRGAVKRFKA-GKNKIKRGSAFRSHILTKMSQKRKRNLREAQYVDSTNVSAVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|158523052|ref|YP_001530922.1| ribosomal protein L35 [Desulfococcus oleovorans Hxd3]
 gi|226724996|sp|A8ZZ72|RL35_DESOH RecName: Full=50S ribosomal protein L35
 gi|158511878|gb|ABW68845.1| ribosomal protein L35 [Desulfococcus oleovorans Hxd3]
          Length = 65

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KTN S+ KRF  T +GK     +   H + K++ K  R+ R + +L S++ K++ R
Sbjct: 1  MQKIKTNRSAAKRFKRTKSGKFVYSKSHGSHILTKKNRKRKRSLRKSHILDSSNNKELKR 60

Query: 61 NY 62
            
Sbjct: 61 LL 62


>gi|312865957|ref|ZP_07726178.1| ribosomal protein L35 [Streptococcus downei F0415]
 gi|311098361|gb|EFQ56584.1| ribosomal protein L35 [Streptococcus downei F0415]
          Length = 66

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPK KT+ +S KRF  T  G ++   A   H    ++ K  R+ R   ++ S D K++ 
Sbjct: 1  MPKQKTHRASAKRFKRTGKGGLKRFRAYTSHRFHGKTKKQRRHLRKAAMVHSGDFKRIK 59


>gi|187918063|ref|YP_001883626.1| 50S ribosomal protein L35 [Borrelia hermsii DAH]
 gi|226713826|sp|B2RZQ0|RL35_BORHD RecName: Full=50S ribosomal protein L35
 gi|119860911|gb|AAX16706.1| LSU ribosomal protein L35P [Borrelia hermsii DAH]
          Length = 65

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M KMKT  S++KR++ T+ GKV+ +    RH + K+S+K  R    + +++S++ K++ +
Sbjct: 1  MSKMKTCKSARKRYAFTSKGKVKYKKQNLRHILTKKSSKRRRKLGKSGLVSSSETKRI-K 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TLLPY 64


>gi|323339584|ref|ZP_08079858.1| 50S ribosomal protein L35 [Lactobacillus ruminis ATCC 25644]
 gi|323092979|gb|EFZ35577.1| 50S ribosomal protein L35 [Lactobacillus ruminis ATCC 25644]
          Length = 67

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KT+ +S KRF  T  G ++   A   H    ++ K  R  R   +++ +D K++ +  
Sbjct: 4  KQKTHRASAKRFKRTGNGGLKRNHAYTSHRFHGKTVKQRRQLRKATMVSGSDMKRIKQML 63


>gi|295397490|ref|ZP_06807573.1| 50S ribosomal protein L35 [Aerococcus viridans ATCC 11563]
 gi|294974290|gb|EFG50034.1| 50S ribosomal protein L35 [Aerococcus viridans ATCC 11563]
          Length = 66

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+ +S KRF  TA+GK++   + + H    ++ K  R  +    + S D K++ +
Sbjct: 1  MPKQKTHRASVKRFKKTASGKLKRSHSERSHRFHGKTKKQRRQHKQATTVHSTDIKRISQ 60

Query: 61 NY 62
            
Sbjct: 61 MM 62


>gi|78044360|ref|YP_360406.1| 50S ribosomal protein L35 [Carboxydothermus hydrogenoformans
          Z-2901]
 gi|148840412|sp|Q3ABS8|RL35_CARHZ RecName: Full=50S ribosomal protein L35
 gi|77996475|gb|ABB15374.1| ribosomal protein L35 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 64

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  ++ KRF  T +GKV+   A   H +  +++K  R  R + +++  D  K+I+
Sbjct: 1  MPKIKTKKAAAKRFKKTGSGKVKHFHAFHSHLLGHKTSKRKRRLRKSAIVSKGD-MKIIK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 KILPY 64


>gi|220931404|ref|YP_002508312.1| ribosomal protein L35 [Halothermothrix orenii H 168]
 gi|219992714|gb|ACL69317.1| ribosomal protein L35 [Halothermothrix orenii H 168]
          Length = 57

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          MPK+KT+    KR   T  GK++   A   H + K++ K  RN R + VL     K+
Sbjct: 1  MPKLKTHKGIAKRIKKTGKGKLKRNKAYHSHLLTKKTGKRKRNLRKSTVLHKTYYKR 57


>gi|262037773|ref|ZP_06011215.1| ribosomal protein L35 [Leptotrichia goodfellowii F0264]
 gi|261748245|gb|EEY35642.1| ribosomal protein L35 [Leptotrichia goodfellowii F0264]
          Length = 68

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T +GK+  + +GK H + K+++K  +      ++     +++ +
Sbjct: 1  MPKMKTHRGTKKRVKVTGSGKLVIKHSGKSHILTKKTHKRKKRLGQDAIVPKGAERRIKK 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|167972618|ref|ZP_02554895.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 5 str. ATCC
          27817]
 gi|167974413|ref|ZP_02556690.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 11 str.
          ATCC 33695]
 gi|167974958|ref|ZP_02557235.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 12 str.
          ATCC 33696]
 gi|167988463|ref|ZP_02570134.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 7 str. ATCC
          27819]
 gi|168362043|ref|ZP_02695222.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 13 str.
          ATCC 33698]
 gi|195867730|ref|ZP_03079731.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 9 str. ATCC
          33175]
 gi|198273327|ref|ZP_03205863.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 4 str. ATCC
          27816]
 gi|209554558|ref|YP_002284627.1| 50S ribosomal protein L35 [Ureaplasma urealyticum serovar 10 str.
          ATCC 33699]
 gi|225550575|ref|ZP_03771524.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 2 str. ATCC
          27814]
 gi|225551083|ref|ZP_03772029.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 8 str. ATCC
          27618]
 gi|226725081|sp|B5ZB37|RL35_UREU1 RecName: Full=50S ribosomal protein L35
 gi|171903494|gb|EDT49783.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 13 str.
          ATCC 33698]
 gi|184209502|gb|EDU06545.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 5 str. ATCC
          27817]
 gi|188018956|gb|EDU56996.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 7 str. ATCC
          27819]
 gi|188997899|gb|EDU66996.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 11 str.
          ATCC 33695]
 gi|195659767|gb|EDX53147.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 12 str.
          ATCC 33696]
 gi|195660585|gb|EDX53841.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 9 str. ATCC
          33175]
 gi|198249847|gb|EDY74627.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 4 str. ATCC
          27816]
 gi|209542059|gb|ACI60288.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 10 str.
          ATCC 33699]
 gi|225378898|gb|EEH01263.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 8 str. ATCC
          27618]
 gi|225379729|gb|EEH02091.1| ribosomal protein L35 [Ureaplasma urealyticum serovar 2 str. ATCC
          27814]
          Length = 64

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          + KT  ++ KRFSIT  GK++ + A + H  + RS K  R+ R   +++++D K+
Sbjct: 5  RQKTKRAAAKRFSITKNGKLKRKHAYRSHLALGRSTKAKRHLRKDAIMSTSDTKR 59


>gi|115483676|ref|NP_001065508.1| Os10g0579500 [Oryza sativa Japonica Group]
 gi|113640040|dbj|BAF27345.1| Os10g0579500 [Oryza sativa Japonica Group]
          Length = 152

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K RF +   G+VR   AGKRH    +S +  R  R   ++  A AK + +
Sbjct: 90  KIKPPSSMKFRFRVMNDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKK 147


>gi|257066831|ref|YP_003153087.1| 50S ribosomal protein L35 [Anaerococcus prevotii DSM 20548]
 gi|256798711|gb|ACV29366.1| ribosomal protein L35 [Anaerococcus prevotii DSM 20548]
          Length = 65

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K KT  ++ KRF +T +GKV  + A K H   K+S    R  R   V++S++ K V 
Sbjct: 4  KNKTRRAAVKRFKVTGSGKVMRRKAYKGHLTAKKSPNRKRRLRKATVVSSSEMKNVK 60


>gi|194246831|ref|YP_002004470.1| 50S ribosomal protein L35 [Candidatus Phytoplasma mali]
 gi|254802465|sp|B3R0P5|RL35_PHYMT RecName: Full=50S ribosomal protein L35
 gi|193807188|emb|CAP18629.1| 50S ribosomal protein L35 [Candidatus Phytoplasma mali]
          Length = 65

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          M K K++S  KKR  I+   K+    A K H    ++ K  R  RG  ++  +D K++ 
Sbjct: 1  MIKKKSHSGLKKRIKISKNKKILRGHAYKNHLAASKTTKQNRQLRGLTMVHKSDVKRIK 59


>gi|119505271|ref|ZP_01627346.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2080]
 gi|119458962|gb|EAW40062.1| 50S ribosomal protein L35 [marine gamma proteobacterium HTCC2080]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K K +S + KRF  TA G  + ++A K H + K + K  R  RGT ++  AD   + R
Sbjct: 1  MSKAKIHSGAAKRFKKTAGG-YKRKSAHKSHILTKMTTKRKRQLRGTSMVDQADKVLIDR 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|12039379|gb|AAG46165.1|AC018727_17 unknown protein [Oryza sativa Japonica Group]
 gi|31433700|gb|AAP55179.1| ribosomal protein L35 containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|125533087|gb|EAY79652.1| hypothetical protein OsI_34796 [Oryza sativa Indica Group]
 gi|125575818|gb|EAZ17102.1| hypothetical protein OsJ_32601 [Oryza sativa Japonica Group]
          Length = 156

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K RF +   G+VR   AGKRH    +S +  R  R   ++  A AK + +
Sbjct: 94  KIKPPSSMKFRFRVMNDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKK 151


>gi|184155786|ref|YP_001844126.1| 50S ribosomal protein L35 [Lactobacillus fermentum IFO 3956]
 gi|227515620|ref|ZP_03945669.1| ribosomal protein L35 [Lactobacillus fermentum ATCC 14931]
 gi|260663497|ref|ZP_05864387.1| 50S ribosomal protein L35 [Lactobacillus fermentum 28-3-CHN]
 gi|226725024|sp|B2GDB4|RL35_LACF3 RecName: Full=50S ribosomal protein L35
 gi|183227130|dbj|BAG27646.1| 50S ribosomal protein L35 [Lactobacillus fermentum IFO 3956]
 gi|227086050|gb|EEI21362.1| ribosomal protein L35 [Lactobacillus fermentum ATCC 14931]
 gi|260552038|gb|EEX25091.1| 50S ribosomal protein L35 [Lactobacillus fermentum 28-3-CHN]
          Length = 65

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT S++ KRF  TA G  ++  +   H    ++ K  R  RG  ++  ++ K+  +
Sbjct: 1  MPKMKTKSAAAKRFKRTAKGGFKSGNSFTSHRFHGKTKKQRRQLRGLSMMDKSNVKRYKK 60


>gi|58259025|ref|XP_566925.1| hypothetical protein CNA04850 [Cryptococcus neoformans var.
          neoformans JEC21]
 gi|57223062|gb|AAW41106.1| hypothetical protein CNA04850 [Cryptococcus neoformans var.
          neoformans JEC21]
          Length = 195

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASA 53
          K+K++S+SKKRF   A+G  +   AGK H     S   +      + + + 
Sbjct: 45 KLKSHSASKKRFFPNASGMFKRAQAGKSHLNTPFSPSKVNRLAKGVYVTNT 95


>gi|256370661|ref|YP_003108486.1| 50S ribosomal protein L35 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009453|gb|ACU52813.1| ribosomal protein L35 [Candidatus Sulcia muelleri SMDSEM]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S +KKRF +   GK++ + + K H + K+ NK  R       +  +D K + +
Sbjct: 1  MLKLKTKSGAKKRFKLIGNGKIKRKKSFKNHLLTKKKNKRKRRLSDFSRVHKSDMKNIKK 60

Query: 61 NY 62
            
Sbjct: 61 QL 62


>gi|224438523|ref|ZP_03659443.1| 50S ribosomal protein L35 [Helicobacter cinaedi CCUG 18818]
 gi|313144950|ref|ZP_07807143.1| 50S ribosomal protein L35 [Helicobacter cinaedi CCUG 18818]
 gi|313129981|gb|EFR47598.1| 50S ribosomal protein L35 [Helicobacter cinaedi CCUG 18818]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S+K   N      + S +   + 
Sbjct: 1  MPKMKTNRGAAKRFKLKKNA-IKRGSAFKSHILTKKSHKRKANLNAPKYVHSTNVDSIK 58


>gi|254456792|ref|ZP_05070220.1| ribosomal protein L35 [Campylobacterales bacterium GD 1]
 gi|207085584|gb|EDZ62868.1| ribosomal protein L35 [Campylobacterales bacterium GD 1]
          Length = 63

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF +   G V+   A + H + K+ +          V++ AD   + 
Sbjct: 1  MPKMKSVKGAVKRFKVKKNGSVKRGTAFRSHILTKQDSDTRSKQNSPKVVSKADEANIK 59


>gi|13357788|ref|NP_078062.1| ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          700970]
 gi|167972005|ref|ZP_02554282.1| ribosomal protein L35 [Ureaplasma parvum serovar 6 str. ATCC
          27818]
 gi|168282375|ref|ZP_02690042.1| ribosomal protein L35 [Ureaplasma parvum serovar 14 str. ATCC
          33697]
 gi|168308529|ref|ZP_02691204.1| ribosomal protein L35 [Ureaplasma parvum serovar 1 str. ATCC
          27813]
 gi|170762449|ref|YP_001752311.1| 50S ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          27815]
 gi|20139830|sp|Q9PQR3|RL35_UREPA RecName: Full=50S ribosomal protein L35
 gi|189042795|sp|B1AIL7|RL35_UREP2 RecName: Full=50S ribosomal protein L35
 gi|11357034|pir||E82914 ribosomal protein L35 UU228 [imported] - Ureaplasma urealyticum
 gi|6899198|gb|AAF30637.1|AE002122_6 ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          700970]
 gi|168828026|gb|ACA33288.1| ribosomal protein L35 [Ureaplasma parvum serovar 3 str. ATCC
          27815]
 gi|171902605|gb|EDT48894.1| ribosomal protein L35 [Ureaplasma parvum serovar 1 str. ATCC
          27813]
 gi|182675772|gb|EDT87677.1| ribosomal protein L35 [Ureaplasma parvum serovar 14 str. ATCC
          33697]
 gi|186700712|gb|EDU18994.1| ribosomal protein L35 [Ureaplasma parvum serovar 6 str. ATCC
          27818]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
          + KT  +  KRFSIT  GK++ + A + H  + RS K  R+ R   +++++D K+
Sbjct: 5  RQKTKRAVAKRFSITKNGKLKRKHAYRSHLALGRSTKAKRHLRKDAIMSTSDTKR 59


>gi|148926391|ref|ZP_01810075.1| 50s ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          CG8486]
 gi|145844783|gb|EDK21888.1| 50s ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          CG8486]
          Length = 63

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +R+ R T  + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRDLRTTKYVHSTNVKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|15611185|ref|NP_222836.1| 50S ribosomal protein L35 [Helicobacter pylori J99]
 gi|15644755|ref|NP_206925.1| 50S ribosomal protein L35 [Helicobacter pylori 26695]
 gi|108562549|ref|YP_626865.1| 50S ribosomal protein L35 [Helicobacter pylori HPAG1]
 gi|188526928|ref|YP_001909615.1| 50S ribosomal protein L35 [Helicobacter pylori Shi470]
 gi|208434083|ref|YP_002265749.1| ribosomal protein L35 [Helicobacter pylori G27]
 gi|210134326|ref|YP_002300765.1| 50S ribosomal protein L35 [Helicobacter pylori P12]
 gi|217031886|ref|ZP_03437388.1| hypothetical protein HPB128_3g5 [Helicobacter pylori B128]
 gi|254778842|ref|YP_003056947.1| 50S ribosomal protein L35 [Helicobacter pylori B38]
 gi|298736933|ref|YP_003729463.1| 50S ribosomal protein L35 [Helicobacter pylori B8]
 gi|308183919|ref|YP_003928052.1| 50S ribosomal protein L35 [Helicobacter pylori SJM180]
 gi|54039203|sp|P66270|RL35_HELPJ RecName: Full=50S ribosomal protein L35
 gi|54041900|sp|P66269|RL35_HELPY RecName: Full=50S ribosomal protein L35
 gi|118573010|sp|Q1CV31|RL35_HELPH RecName: Full=50S ribosomal protein L35
 gi|226725018|sp|B6JPM4|RL35_HELP2 RecName: Full=50S ribosomal protein L35
 gi|226725019|sp|B5Z9Q3|RL35_HELPG RecName: Full=50S ribosomal protein L35
 gi|226725020|sp|B2URV3|RL35_HELPS RecName: Full=50S ribosomal protein L35
 gi|2313210|gb|AAD07195.1| ribosomal protein L35 (rpl35) [Helicobacter pylori 26695]
 gi|4154623|gb|AAD05694.1| 50S RIBOSOMAL PROTEIN L35 [Helicobacter pylori J99]
 gi|107836322|gb|ABF84191.1| ribosomal protein L35 [Helicobacter pylori HPAG1]
 gi|188143168|gb|ACD47585.1| 50S ribosomal protein L35 [Helicobacter pylori Shi470]
 gi|208432012|gb|ACI26883.1| ribosomal protein L35 [Helicobacter pylori G27]
 gi|210132294|gb|ACJ07285.1| ribosomal protein L35 [Helicobacter pylori P12]
 gi|216946355|gb|EEC24960.1| hypothetical protein HPB128_3g5 [Helicobacter pylori B128]
 gi|254000753|emb|CAX28677.1| 50S ribosomal subunit protein A L35 [Helicobacter pylori B38]
 gi|261838991|gb|ACX98756.1| ribosomal protein L35 [Helicobacter pylori 52]
 gi|297379346|gb|ADI34233.1| ribosomal protein L35 [Helicobacter pylori v225d]
 gi|298356127|emb|CBI66999.1| large subunit ribosomal protein L35 [Helicobacter pylori B8]
 gi|307636815|gb|ADN79265.1| LSU ribosomal protein L35p [Helicobacter pylori 908]
 gi|308059839|gb|ADO01735.1| 50S ribosomal protein L35 [Helicobacter pylori SJM180]
 gi|308061415|gb|ADO03303.1| 50S ribosomal protein L35 [Helicobacter pylori Cuz20]
 gi|308062985|gb|ADO04872.1| 50S ribosomal protein L35 [Helicobacter pylori Sat464]
 gi|315586096|gb|ADU40477.1| 50S ribosomal protein L35 [Helicobacter pylori 35A]
 gi|317008797|gb|ADU79377.1| 50S ribosomal protein L35 [Helicobacter pylori India7]
 gi|317010403|gb|ADU84150.1| 50S ribosomal protein L35 [Helicobacter pylori SouthAfrica7]
 gi|317011969|gb|ADU82577.1| 50S ribosomal protein L35 [Helicobacter pylori Lithuania75]
 gi|317013546|gb|ADU80982.1| 50S ribosomal protein L35 [Helicobacter pylori Gambia94/24]
 gi|317176944|dbj|BAJ54733.1| 50S ribosomal protein L35 [Helicobacter pylori F16]
 gi|317179511|dbj|BAJ57299.1| 50S ribosomal protein L35 [Helicobacter pylori F30]
 gi|317179930|dbj|BAJ57716.1| 50S ribosomal protein L35 [Helicobacter pylori F32]
 gi|317181403|dbj|BAJ59187.1| 50S ribosomal protein L35 [Helicobacter pylori F57]
 gi|325995404|gb|ADZ50809.1| 50S ribosomal protein L35 [Helicobacter pylori 2018]
 gi|325997002|gb|ADZ49210.1| 50S ribosomal protein L35 [Helicobacter pylori 2017]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S K   N      +   +A  V+
Sbjct: 1  MPKMKTNRGASKRFKVKKN-LIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVM 58


>gi|225155467|ref|ZP_03723958.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
 gi|224803768|gb|EEG22000.1| ribosomal protein L35 [Opitutaceae bacterium TAV2]
          Length = 64

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           KT  S  KRF IT TGK+  +  G RH +  +S K  R A    ++A   A   ++  L
Sbjct: 2  QKTKKSISKRFKITGTGKMLRRTPGFRHLLASKSTKSKRRASKDKLVAPGHAA-ALKQCL 60

Query: 64 PNGI 67
          P G+
Sbjct: 61 PFGL 64


>gi|237803266|ref|YP_002888460.1| 50S ribosomal protein L35 [Chlamydia trachomatis B/Jali20/OT]
 gi|231274500|emb|CAX11296.1| LSU ribosomal protein L35P [Chlamydia trachomatis B/Jali20/OT]
          Length = 61

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MK+N S   RF +T +G+++   +GKRH + KRS++  RN     ++         R  L
Sbjct: 1  MKSNKSVAARFKLTGSGQLKRTRSGKRHKLSKRSSQQKRNLSKQPLVDQGQVGMYKRMML 60


>gi|28411204|emb|CAD24033.1| putative plastid ribosomal protein L35 [Zea mays]
          Length = 76

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          KMKT+ +S KRF +T  GK+  + AGK+H + K++ K  +     + +  +D   V
Sbjct: 7  KMKTHKASAKRFRVTRRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 62


>gi|242309944|ref|ZP_04809099.1| 50S ribosomal protein L35 [Helicobacter pullorum MIT 98-5489]
 gi|239523241|gb|EEQ63107.1| 50S ribosomal protein L35 [Helicobacter pullorum MIT 98-5489]
          Length = 64

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +     ++  +A K H + K+  + I N      +  A+ + V +
Sbjct: 1  MPKMKTNRGAAKRFKLKKN-LIKRGSAFKSHILTKKRPRKIANLNAPKYVHDANIESVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|83273757|ref|XP_729538.1| ribosomal protein L35 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23487627|gb|EAA21103.1| ribosomal protein L35, putative [Plasmodium yoelii yoelii]
          Length = 168

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K KTN S  KRF IT  GK+  +  G  H + KR++    + R   V+AS    K+++ Y
Sbjct: 106 KPKTNKSIAKRFKITKNGKLIRKKCGGSHMLRKRTSANRTSLRKKTVIAS---NKIVKKY 162


>gi|313681239|ref|YP_004058977.1| LSU ribosomal protein l35p [Sulfuricurvum kujiense DSM 16994]
 gi|313154099|gb|ADR32777.1| LSU ribosomal protein L35P [Sulfuricurvum kujiense DSM 16994]
          Length = 64

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+   + KRF +   G ++  +A + H + K+     R      V+A+ D K + +
Sbjct: 1  MPKMKSVKGAVKRFKVKKNGTIKRGSAFRSHILTKQDAGTRRKQNAPKVVANVDVKAIKK 60


>gi|166154178|ref|YP_001654296.1| 50S ribosomal protein L35 [Chlamydia trachomatis 434/Bu]
 gi|166155053|ref|YP_001653308.1| 50S ribosomal protein L35 [Chlamydia trachomatis
          L2b/UCH-1/proctitis]
 gi|237805187|ref|YP_002889341.1| 50S ribosomal protein L35 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|270285007|ref|ZP_06194401.1| LSU ribosomal protein L35P [Chlamydia muridarum Nigg]
 gi|270289030|ref|ZP_06195332.1| LSU ribosomal protein L35P [Chlamydia muridarum Weiss]
 gi|165930166|emb|CAP03650.1| LSU ribosomal protein L35P [Chlamydia trachomatis 434/Bu]
 gi|165931041|emb|CAP06604.1| LSU ribosomal protein L35P [Chlamydia trachomatis
          L2b/UCH-1/proctitis]
 gi|231273487|emb|CAX10403.1| LSU ribosomal protein L35P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|289525880|emb|CBJ15362.1| LSU ribosomal protein L35P [Chlamydia trachomatis Sweden2]
          Length = 61

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MK+N S   RF +T +G+++    GKRH + KRS++  RN     ++         R  L
Sbjct: 1  MKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKRSSQQKRNLSKQPLVDQGQVGMYKRMML 60


>gi|315641762|ref|ZP_07896776.1| 50S ribosomal protein L35 [Enterococcus italicus DSM 15952]
 gi|315482525|gb|EFU73063.1| 50S ribosomal protein L35 [Enterococcus italicus DSM 15952]
          Length = 66

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK KT+    KR   T  G ++   A   H    ++ K  R  R   ++A  D K++ +
Sbjct: 1  MPKQKTHRGLAKRVKRTGKGGLKRFRAFTSHRFHGKTKKQRRQLRKASMVAKGDYKRIRQ 60

Query: 61 NYL 63
             
Sbjct: 61 QLA 63


>gi|237752909|ref|ZP_04583389.1| 50s ribosomal protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229375176|gb|EEO25267.1| 50s ribosomal protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 64

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +     V+  +A K H + K+  + I N      +  A+ + V +
Sbjct: 1  MPKMKTNRGAAKRFKLKKN-LVKRGSAFKSHILTKKRPRKIANLNAPKYVHDANIESVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|161546632|ref|NP_859975.2| 50S ribosomal protein L35 [Helicobacter hepaticus ATCC 51449]
 gi|54036292|sp|Q7VJ07|RL35_HELHP RecName: Full=50S ribosomal protein L35
          Length = 64

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S++   N      + S +   V 
Sbjct: 1  MPKMKTNRGAAKRFKLKKNA-IKRGSAFKNHILTKKSHQRKANLNAPKYVHSTNVDSVK 58


>gi|15606166|ref|NP_213543.1| ribosomal protein L35 [Aquifex aeolicus VF5]
 gi|6226000|sp|O66982|RL35_AQUAE RecName: Full=50S ribosomal protein L35
 gi|2983363|gb|AAC06950.1| ribosomal protein L35 [Aquifex aeolicus VF5]
          Length = 67

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          KMKTN S+ KRF +TA GK++   +G  H   K+S+K  R+ R    +     K V 
Sbjct: 5  KMKTNRSAAKRFKVTAKGKIKRWKSGGAHYNTKKSSKRKRHLRKHTYVKDNMLKHVK 61


>gi|167751464|ref|ZP_02423591.1| hypothetical protein EUBSIR_02460 [Eubacterium siraeum DSM 15702]
 gi|167655272|gb|EDR99401.1| hypothetical protein EUBSIR_02460 [Eubacterium siraeum DSM 15702]
 gi|291530273|emb|CBK95858.1| LSU ribosomal protein L35P [Eubacterium siraeum 70/3]
 gi|291557088|emb|CBL34205.1| LSU ribosomal protein L35P [Eubacterium siraeum V10Sc8a]
          Length = 68

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 33/58 (56%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT+S +KKRF+I+  GKV+ Q   +RH + +++ K  R  R        +  +V +
Sbjct: 6  KIKTHSGAKKRFNISKNGKVKYQKTNRRHRLTQKATKRKRINRAAGYCDKTNVAEVKK 63


>gi|207092169|ref|ZP_03239956.1| 50S ribosomal protein L35 [Helicobacter pylori HPKX_438_AG0C1]
 gi|207110668|ref|ZP_03244830.1| 50S ribosomal protein L35 [Helicobacter pylori HPKX_438_CA4C1]
 gi|217034630|ref|ZP_03440037.1| hypothetical protein HP9810_881g23 [Helicobacter pylori 98-10]
 gi|216942925|gb|EEC22412.1| hypothetical protein HP9810_881g23 [Helicobacter pylori 98-10]
          Length = 64

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S K   N      +   +   V+
Sbjct: 1  MPKMKTNRGASKRFKVKKN-LIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNVHSVM 58


>gi|45185363|ref|NP_983080.1| ABR133Wp [Ashbya gossypii ATCC 10895]
 gi|44981052|gb|AAS50904.1| ABR133Wp [Ashbya gossypii ATCC 10895]
          Length = 96

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KR+  TA G  +   AG+ HG      + ++   G  + ASA  K++ R  L
Sbjct: 36 MKTHKGAAKRWRKTAGG-YKRSKAGRSHGNTGWGQRALKQLSGRTMAASAHLKRLRR-LL 93

Query: 64 PN 65
          P 
Sbjct: 94 PY 95


>gi|332653951|ref|ZP_08419695.1| ribosomal protein L35 [Ruminococcaceae bacterium D16]
 gi|332517037|gb|EGJ46642.1| ribosomal protein L35 [Ruminococcaceae bacterium D16]
          Length = 69

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMI--KRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT+S +KKRFS+T +GKV+     KRH +    ++ K  R  RGT      +   + R
Sbjct: 5  KIKTHSGAKKRFSLTKSGKVKRAMTKKRHLLNGHGKTTKLKRALRGTTYADKTNEAAIKR 64

Query: 61 NYL 63
            L
Sbjct: 65 MIL 67


>gi|255647366|gb|ACU24149.1| unknown [Glycine max]
          Length = 155

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK+ SS K RF     G +R    GKRH    +S K  R  R   ++ +A  K + +
Sbjct: 93  KMKSYSSFKSRFRAMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYTKVMKK 150


>gi|148536296|gb|ABQ85700.1| 50S ribosomal protein L35 [Mycoplasma caviae]
          Length = 66

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA 44
          MPKMKT S+ KKR  IT TGK+  + A + H    ++ K  R A
Sbjct: 23 MPKMKTKSALKKRIKITGTGKIMREQAYRSHLSQNKTTKQKRQA 66


>gi|227547605|ref|ZP_03977654.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 55813]
 gi|227211860|gb|EEI79756.1| ribosomal protein L35 [Bifidobacterium longum subsp. infantis
          ATCC 55813]
          Length = 61

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 30/55 (54%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MKTNS++ KR  IT TGKV+   +  RH +  +S +  R      VL    AKK+
Sbjct: 1  MKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKL 55


>gi|308182298|ref|YP_003926425.1| 50S ribosomal protein L35 [Helicobacter pylori PeCan4]
 gi|308064483|gb|ADO06375.1| 50S ribosomal protein L35 [Helicobacter pylori PeCan4]
          Length = 64

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S K   N      +   +A  V+
Sbjct: 1  MPKMKTNRGASKRFKVKKN-LIKRGSAFKSHILTKKSPKRKANLNVPKHVHHTNAHSVM 58


>gi|242620021|ref|YP_003002025.1| 50S ribosomal protein L35 [Aureococcus anophagefferens]
 gi|239997266|gb|ACS36789.1| 50S ribosomal protein L35 [Aureococcus anophagefferens]
          Length = 64

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT  S+ KR+  T  GK   +   K H + K+S K  R+     V A  D+K +  
Sbjct: 1  MSKLKTRRSADKRYRKTKNGKFIFKRPYKSHILEKKSPKQRRHMSTMGVAAKGDSKSIA- 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 IMLPY 64


>gi|94984680|ref|YP_604044.1| 50S ribosomal protein L35 [Deinococcus geothermalis DSM 11300]
 gi|145572732|sp|Q1J0V9|RL35_DEIGD RecName: Full=50S ribosomal protein L35
 gi|94554961|gb|ABF44875.1| ribosomal protein L35 [Deinococcus geothermalis DSM 11300]
          Length = 67

 Score = 47.4 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 35/66 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  S  +R  +TATGKV A  +GKRH    +S   IR      VLA ++  ++  
Sbjct: 1  MPKMKTKKSMTRRVKVTATGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKSEWARMKL 60

Query: 61 NYLPNG 66
            L  G
Sbjct: 61 GLLAKG 66


>gi|303273562|ref|XP_003056142.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462226|gb|EEH59518.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 186

 Score = 47.4 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K RF  TATGK   +  GKRH    ++ +     R T ++ ++  + + +
Sbjct: 123 KIKPYSSWKARFRATATGKYARKQKGKRHKASSKTLRQKMLLRATKLVHNSLVQPMKK 180


>gi|269101065|ref|YP_003289213.1| 50S ribosomal protein L35 [Ectocarpus siliculosus]
 gi|266631573|emb|CAV31244.1| Chloroplast 50S ribosomal protein L35 [Ectocarpus siliculosus]
 gi|270118703|emb|CAT18778.1| Chloroplast 50S ribosomal protein L35 [Ectocarpus siliculosus]
          Length = 64

 Score = 47.4 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K   S+KKR+ + A  +   + A K H + K+S K  +N    +V++  D K + +
Sbjct: 1  MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|261837577|gb|ACX97343.1| ribosomal protein L35 [Helicobacter pylori 51]
 gi|332672965|gb|AEE69782.1| 50S ribosomal protein L35 [Helicobacter pylori 83]
          Length = 64

 Score = 47.4 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S K   N      +   +A  V+
Sbjct: 1  MPKMKTNRGASKRFKVKKN-LIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVM 58


>gi|262341225|ref|YP_003284080.1| 50S ribosomal protein L35 [Blattabacterium sp. (Blattella
          germanica) str. Bge]
 gi|262272562|gb|ACY40470.1| 50S ribosomal protein L35 [Blattabacterium sp. (Blattella
          germanica) str. Bge]
          Length = 62

 Score = 47.4 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          M K+KT S SKKRF        + + A K H + K+S +  RN     +L  +D + + +
Sbjct: 1  MTKLKTKSGSKKRFKKNGEWIYKKKHAFKNHLLTKKSKRRKRNLSRFTLLNRSDQQNIKK 60

Query: 61 N 61
           
Sbjct: 61 Q 61


>gi|222823080|ref|YP_002574653.1| 50S ribosomal protein L35 [Campylobacter lari RM2100]
 gi|254802440|sp|B9KEB7|RL35_CAMLR RecName: Full=50S ribosomal protein L35
 gi|222538301|gb|ACM63402.1| 50S ribosomal protein L35 [Campylobacter lari RM2100]
          Length = 63

 Score = 47.4 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +R+ R +  + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRDLRTSKYVHSTNVKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|153950939|ref|YP_001397471.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. doylei
          269.97]
 gi|166231172|sp|A7H1U1|RL35_CAMJD RecName: Full=50S ribosomal protein L35
 gi|152938385|gb|ABS43126.1| ribosomal protein L35 [Campylobacter jejuni subsp. doylei 269.97]
          Length = 63

 Score = 47.4 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +RN R    + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRNLRTAKYVHSTNVKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|310779333|ref|YP_003967666.1| LSU ribosomal protein L35P [Ilyobacter polytropus DSM 2926]
 gi|309748656|gb|ADO83318.1| LSU ribosomal protein L35P [Ilyobacter polytropus DSM 2926]
          Length = 68

 Score = 47.4 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++  +KKR  ITA GK   + +G  H + K+        +   V     A+K +R
Sbjct: 1  MPKMKSHKGTKKRVKITAKGKFVVKHSGTSHILTKKKRNKKNKLKKDFVAGEGSARK-LR 59

Query: 61 NYLPNG 66
            LP G
Sbjct: 60 VLLPTG 65


>gi|242624365|ref|YP_003002283.1| 50S ribosomal protein L35 [Aureoumbra lagunensis]
 gi|239997473|gb|ACS36995.1| 50S ribosomal protein L35 [Aureoumbra lagunensis]
          Length = 64

 Score = 47.4 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          M K+KT  S+ KR+  T TGK   +   K H + K+S K  R+ +   V    DAK + 
Sbjct: 1  MNKLKTRQSASKRYRRTKTGKFVFKRPYKAHILEKKSRKQKRHMKTDGVACKGDAKNIK 59


>gi|227872175|ref|ZP_03990542.1| ribosomal protein L35 [Oribacterium sinus F0268]
 gi|227841958|gb|EEJ52221.1| ribosomal protein L35 [Oribacterium sinus F0268]
          Length = 67

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT  ++ KRF +T TGK+    A K H + K++ K  R  R   V+   + +KV++  
Sbjct: 5  KLKTKRAAAKRFKLTGTGKLVRNKANKSHILTKKTTKRKRTLRKDTVVDHTN-EKVMKKI 63

Query: 63 LPN 65
          LP 
Sbjct: 64 LPY 66


>gi|319938144|ref|ZP_08012542.1| 50S ribosomal protein L35 [Coprobacillus sp. 29_1]
 gi|319806665|gb|EFW03314.1| 50S ribosomal protein L35 [Coprobacillus sp. 29_1]
          Length = 64

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK++S  KKR   T +GK++   A   H    +++K  ++     ++  +D K++  
Sbjct: 1  MPKMKSHSGLKKRLKKTGSGKMKRSHAYISHQSHHKTHKQKKHLAKATLVHPSDMKRIKS 60

Query: 61 NY 62
            
Sbjct: 61 RL 62


>gi|254444647|ref|ZP_05058123.1| ribosomal protein L35 [Verrucomicrobiae bacterium DG1235]
 gi|198258955|gb|EDY83263.1| ribosomal protein L35 [Verrucomicrobiae bacterium DG1235]
          Length = 64

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           KT  S  KRF +T  GK+R ++ G+RH + +++ K  RN      +++     +IR  L
Sbjct: 2  QKTKKSIAKRFKLTGNGKLRRRSPGQRHHLHQKTTKQKRNLNKDKSVSAGRQADLIRG-L 60

Query: 64 PNGI 67
          P+G+
Sbjct: 61 PHGL 64


>gi|77024083|gb|ABA55512.1| chloroplast 50S ribosomal protein L35 [Isochrysis galbana]
          Length = 163

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+K++  +K+RF +   G    +AAGK H  +    + I   R   V+      K +R  
Sbjct: 99  KLKSHKGAKRRFKLRGDGSWTHRAAGKSHLQVGLRRRSILAKRKPRVVKLKGLVKKLRRL 158

Query: 63  LPNG 66
           LP G
Sbjct: 159 LPYG 162


>gi|260777879|ref|ZP_05886772.1| LSU ribosomal protein L35p [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605892|gb|EEX32177.1| LSU ribosomal protein L35p [Vibrio coralliilyticus ATCC BAA-450]
          Length = 50

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLA 51
          MPKMKTN  + KRF  TA G ++ + A KRH + KR+ K  R  R   +L+
Sbjct: 1  MPKMKTNKGAAKRFKKTAGG-IKFKHATKRHILTKRTTKNKRQLRPNAILS 50


>gi|18422571|ref|NP_568647.1| unknown protein [Arabidopsis thaliana]
 gi|21593524|gb|AAM65491.1| unknown [Arabidopsis thaliana]
 gi|26450411|dbj|BAC42320.1| unknown protein [Arabidopsis thaliana]
 gi|28827502|gb|AAO50595.1| unknown protein [Arabidopsis thaliana]
 gi|332007889|gb|AED95272.1| Ribosomal protein L35 [Arabidopsis thaliana]
          Length = 173

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 27/58 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K RF     G +R    GKRH    +S K  R  R   ++  A AK + +
Sbjct: 111 KIKFYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKK 168


>gi|302391181|ref|YP_003827001.1| 50S ribosomal protein L35P [Acetohalobium arabaticum DSM 5501]
 gi|302203258|gb|ADL11936.1| LSU ribosomal protein L35P [Acetohalobium arabaticum DSM 5501]
          Length = 65

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADA 55
          MPKMKT+  +KKRF  T+ GK + +   + H M K+++   R  R    +   D 
Sbjct: 1  MPKMKTHKGAKKRFKKTSKGKYKRKRTKRNHLMTKKNSNKKRKLRKDATVKKCDE 55


>gi|57168368|ref|ZP_00367502.1| ribosomal protein L35 [Campylobacter coli RM2228]
 gi|57237302|ref|YP_178315.1| 50S ribosomal protein L35 [Campylobacter jejuni RM1221]
 gi|57505783|ref|ZP_00371709.1| ribosomal protein L35 [Campylobacter upsaliensis RM3195]
 gi|86151515|ref|ZP_01069730.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153715|ref|ZP_01071918.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|121612551|ref|YP_999957.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|157414541|ref|YP_001481797.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          81116]
 gi|167004913|ref|ZP_02270671.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283955667|ref|ZP_06373160.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 1336]
 gi|305432784|ref|ZP_07401943.1| 50S ribosomal protein L35 [Campylobacter coli JV20]
 gi|315639392|ref|ZP_07894554.1| 50S ribosomal protein L35 [Campylobacter upsaliensis JV21]
 gi|81675640|sp|Q5HWM0|RL35_CAMJR RecName: Full=50S ribosomal protein L35
 gi|166231173|sp|A1VXW6|RL35_CAMJJ RecName: Full=50S ribosomal protein L35
 gi|172047025|sp|A8FK33|RL35_CAMJ8 RecName: Full=50S ribosomal protein L35
 gi|57016056|gb|EAL52844.1| ribosomal protein L35 [Campylobacter upsaliensis RM3195]
 gi|57020176|gb|EAL56850.1| ribosomal protein L35 [Campylobacter coli RM2228]
 gi|57166106|gb|AAW34885.1| ribosomal protein L35 [Campylobacter jejuni RM1221]
 gi|85841862|gb|EAQ59109.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842676|gb|EAQ59888.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|87250204|gb|EAQ73162.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157385505|gb|ABV51820.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 81116]
 gi|283792892|gb|EFC31668.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 1336]
 gi|304444181|gb|EFM36835.1| 50S ribosomal protein L35 [Campylobacter coli JV20]
 gi|307747183|gb|ADN90453.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. jejuni M1]
 gi|315057672|gb|ADT72001.1| LSU ribosomal protein L35p [Campylobacter jejuni subsp. jejuni
          S3]
 gi|315480718|gb|EFU71360.1| 50S ribosomal protein L35 [Campylobacter upsaliensis JV21]
 gi|315930729|gb|EFV09741.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 305]
          Length = 63

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +R+ R    + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|325295459|ref|YP_004281973.1| 50S ribosomal protein L35 [Desulfurobacterium thermolithotrophum
          DSM 11699]
 gi|325065907|gb|ADY73914.1| 50S ribosomal protein L35 [Desulfurobacterium thermolithotrophum
          DSM 11699]
          Length = 65

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 31/63 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+ KR  +TA GK++     K H + K+S K  R  R    L  A A    +
Sbjct: 1  MPKIKTRRSAAKRVKVTAKGKIKHWHPNKSHILTKKSRKRKRKLRKAAYLEGAQAANYKQ 60

Query: 61 NYL 63
            L
Sbjct: 61 LVL 63


>gi|189219985|ref|YP_001940625.1| ribosomal protein L35 [Methylacidiphilum infernorum V4]
 gi|189186843|gb|ACD84028.1| Ribosomal protein L35 [Methylacidiphilum infernorum V4]
          Length = 69

 Score = 47.0 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 34/61 (55%)

Query: 2  PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          P+ KT  +  KRF ++A GK+  + +G+RH    ++ K +R      V+  +D KK++ +
Sbjct: 6  PRRKTKKAVAKRFKVSAKGKILYRGSGRRHLASSKNRKRMRRIGSVKVVDDSDRKKIVES 65

Query: 62 Y 62
           
Sbjct: 66 L 66


>gi|240047800|ref|YP_002961188.1| 50S ribosomal protein L35 [Mycoplasma conjunctivae HRC/581]
 gi|239985372|emb|CAT05385.1| 50S ribosomal protein L35 [Mycoplasma conjunctivae]
          Length = 64

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          K KT S+  KR  +TA+GK++ + A + H    +S K  R +R      S+D K++ 
Sbjct: 5  KSKTKSAITKRIKVTASGKIKHKHAYRSHLAQSKSTKQKRQSRKATTQHSSDFKRIK 61


>gi|307297788|ref|ZP_07577594.1| ribosomal protein L35 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917048|gb|EFN47430.1| ribosomal protein L35 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 67

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+ +S KR+ +T +GK+    +G  H   K+S    R AR   ++     KKV ++ 
Sbjct: 6  KMKTHKASAKRYKVTGSGKIMRNQSGTGHNTGKKSESSRREARKWKLVEGGYEKKVKKSL 65


>gi|227485253|ref|ZP_03915569.1| ribosomal protein L35 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236713|gb|EEI86728.1| ribosomal protein L35 [Anaerococcus lactolyticus ATCC 51172]
          Length = 73

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+KT  ++ KRF +T +GK+  + A K H   K+S    R  R    ++    K V +
Sbjct: 12 KIKTKRAAAKRFKVTGSGKIMRRKAYKGHLTAKKSPNRKRRLRKPAEVSQTVYKNVKK 69


>gi|291457667|ref|ZP_06597057.1| ribosomal protein L35 [Bifidobacterium breve DSM 20213]
 gi|291380720|gb|EFE88238.1| ribosomal protein L35 [Bifidobacterium breve DSM 20213]
          Length = 61

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MKTNS++ KR  IT +GKV    +  RH +  +S +  R      VL    AKK+
Sbjct: 1  MKTNSAASKRARITGSGKVMQAGSAMRHNLEHKSARKRRALSADAVLRGGQAKKL 55


>gi|224417827|ref|ZP_03655833.1| 50S ribosomal protein L35 [Helicobacter canadensis MIT 98-5491]
 gi|253827167|ref|ZP_04870052.1| 50S ribosomal protein L35 [Helicobacter canadensis MIT 98-5491]
 gi|313141368|ref|ZP_07803561.1| 50S ribosomal protein L35 [Helicobacter canadensis MIT 98-5491]
 gi|253510573|gb|EES89232.1| 50S ribosomal protein L35 [Helicobacter canadensis MIT 98-5491]
 gi|313130399|gb|EFR48016.1| 50S ribosomal protein L35 [Helicobacter canadensis MIT 98-5491]
          Length = 64

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKTN  + KRF +     ++  +A K H + K+  + I N      + SA+++ V +
Sbjct: 1  MPKMKTNRGAAKRFKLKKN-LIKRGSAFKSHILTKKRPRKIANLNAPKYVHSANSESVKK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|293401374|ref|ZP_06645517.1| ribosomal protein L35 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305012|gb|EFE46258.1| ribosomal protein L35 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 61

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MK++    KR   T +GK++   A   H    ++ K  R+ R    + + D K++ +  
Sbjct: 1  MKSHRGLAKRIKTTGSGKLKRSRAYTSHRFHGKTQKQKRHLRKASTVHNTDFKRIKQML 59


>gi|206603262|gb|EDZ39742.1| Ribosomal protein L35 [Leptospirillum sp. Group II '5-way CG']
          Length = 65

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K  S++ KRF ++ TGK+R     KRH M  +S+K  R+   T  L    +  + +  
Sbjct: 6  KLKVKSAASKRFFVSGTGKIRYHKTNKRHLMTSKSSKRTRSL-KTGTLEKGQSDNIRKVL 64


>gi|269991260|emb|CAX12438.1| Chloroplast 50S ribosomal protein L35 [Fucus vesiculosus]
          Length = 64

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+K   S+KKR+ +    K   Q A K H + K+ +K  RN    +++  +D K + +
Sbjct: 1  MPKLKVRKSAKKRYKLIKGKKFVRQKAFKGHLLEKKCSKRKRNLSSRVIVNQSDTKAIKK 60

Query: 61 NY 62
            
Sbjct: 61 ML 62


>gi|297791165|ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309302|gb|EFH39726.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 170

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 27/58 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K RF     G +R    GKRH    +S K  R  R   ++  A AK + +
Sbjct: 108 KIKFYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKK 165


>gi|145343736|ref|XP_001416468.1| ribosomal protein L35, chloroplast precursor [Ostreococcus
           lucimarinus CCE9901]
 gi|144576693|gb|ABO94761.1| ribosomal protein L35, chloroplast precursor [Ostreococcus
           lucimarinus CCE9901]
          Length = 129

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
           KMKT  ++ KR+ +TA+GKV  +  GK H    +          
Sbjct: 62  KMKTRKAAAKRYKVTASGKVLHRRPGKAHLNGPKPTTRKARLSH 105


>gi|283955338|ref|ZP_06372837.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 414]
 gi|283793098|gb|EFC31868.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 414]
          Length = 63

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +R+ R    + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNIKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|124516421|gb|EAY57929.1| ribosomal protein L35 [Leptospirillum rubarum]
          Length = 65

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+K  S++ KRF ++ TGK+R     KRH M  +S K  R+   T  L    +  + +  
Sbjct: 6  KLKVKSAASKRFFVSGTGKIRYHKTNKRHLMTSKSAKRTRSL-KTGTLEKGQSDNIRKVL 64


>gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 28/58 (48%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK+ SS K RF     G +R    GKRH    +S K  R  R   ++  A AK + +
Sbjct: 94  KMKSYSSFKSRFRTMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKVMKK 151


>gi|167537191|ref|XP_001750265.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771255|gb|EDQ84924.1| predicted protein [Monosiga brevicollis MX1]
          Length = 165

 Score = 46.6 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KMK   +   RF I    KV+   AG+ H    ++ K +R  R          K ++R  
Sbjct: 102 KMKRKKAMAARFKIVGNDKVKYWRAGRVHNSSGKTKKRLRLLRRPGYAVGPRRKTILRGL 161

Query: 63  LPN 65
           L  
Sbjct: 162 LGY 164


>gi|167461621|ref|ZP_02326710.1| hypothetical protein Plarl_03535 [Paenibacillus larvae subsp.
          larvae BRL-230010]
          Length = 34

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/34 (55%), Positives = 23/34 (67%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMI 34
          MPKMKT+SS K RF IT TGKV+   A + H + 
Sbjct: 1  MPKMKTHSSLKDRFKITGTGKVKRYKAYRNHLLS 34


>gi|32261992|gb|AAP77041.1| ribosomal protein L35 [Helicobacter hepaticus ATCC 51449]
          Length = 81

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKTN  + KRF +     ++  +A K H + K+S++   N      + S +   V 
Sbjct: 18 MPKMKTNRGAAKRFKLKKNA-IKRGSAFKNHILTKKSHQRKANLNAPKYVHSTNVDSVK 75


>gi|268678725|ref|YP_003303156.1| ribosomal protein L35 [Sulfurospirillum deleyianum DSM 6946]
 gi|268616756|gb|ACZ11121.1| ribosomal protein L35 [Sulfurospirillum deleyianum DSM 6946]
          Length = 64

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT   + KRF  T+  K++  AA + H + K+  K +R  +    + + D K V 
Sbjct: 1  MPKMKTVRGAAKRFR-TSKNKIKRGAAFRSHILTKKPTKRMRGLKVAKTVDARDEKSVK 58


>gi|313665132|ref|YP_004047003.1| ribosomal protein L35 [Mycoplasma leachii PG50]
 gi|312949404|gb|ADR24000.1| ribosomal protein L35 [Mycoplasma leachii PG50]
          Length = 63

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  S  KR ++ + G ++   A + H    ++ K  R      +++  D K + 
Sbjct: 1  MPKMKTKKSLAKRVTVKSNGTLKRAKAYRSHRATGKTTKQKRQLGKATIISKVDMKNLK 59


>gi|269123271|ref|YP_003305848.1| 50S ribosomal protein L35 [Streptobacillus moniliformis DSM
          12112]
 gi|268314597|gb|ACZ00971.1| ribosomal protein L35 [Streptobacillus moniliformis DSM 12112]
          Length = 68

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T TGK   + +GK H + K+++K  +      VL    AKKV R
Sbjct: 1  MPKMKTHKGTKKRVKVTGTGKFVVKHSGKSHILTKKTHKRKKRLGKDQVLDGKAAKKVSR 60

Query: 61 NYL 63
             
Sbjct: 61 LLA 63


>gi|160902177|ref|YP_001567758.1| ribosomal protein L35 [Petrotoga mobilis SJ95]
 gi|160359821|gb|ABX31435.1| ribosomal protein L35 [Petrotoga mobilis SJ95]
          Length = 70

 Score = 46.2 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK+KT  S+KKRF +T  GK+    +   H    +++  +R  +  + +      KV +
Sbjct: 6  MPKLKTKGSAKKRFKVTKNGKILRHRSNVGHNTGFKNSSHMRRLKKEVEVPKEIVDKVEK 65

Query: 61 NY 62
          + 
Sbjct: 66 SL 67


>gi|78776407|ref|YP_392722.1| ribosomal protein L35 [Sulfurimonas denitrificans DSM 1251]
 gi|148887126|sp|Q30U44|RL35_SULDN RecName: Full=50S ribosomal protein L35
 gi|78496947|gb|ABB43487.1| LSU ribosomal protein L35P [Sulfurimonas denitrificans DSM 1251]
          Length = 63

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+   + KRF +   G V+   A + H + K+  +       + ++A  D K V 
Sbjct: 1  MPKMKSVKGAVKRFKVKKNGTVKRGTAFRSHILTKQDPQTRTTQHKSKIIAKVDEKNVK 59


>gi|182414170|ref|YP_001819236.1| ribosomal protein L35 [Opitutus terrae PB90-1]
 gi|177841384|gb|ACB75636.1| ribosomal protein L35 [Opitutus terrae PB90-1]
          Length = 64

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           KT  S  KRF +TA GK+  +  G RH +  +S+K  R A    ++A   A  + R  L
Sbjct: 2  QKTKKSIAKRFKLTARGKLVRRTPGFRHLLATKSSKQKRRASRDKLVAEGHAAPLKRA-L 60

Query: 64 PNGI 67
          P G+
Sbjct: 61 PFGL 64


>gi|42560772|ref|NP_975223.1| 50S ribosomal protein L35 [Mycoplasma mycoides subsp. mycoides SC
          str. PG1]
 gi|83319631|ref|YP_424191.1| 50S ribosomal protein L35 [Mycoplasma capricolum subsp.
          capricolum ATCC 27343]
 gi|331703216|ref|YP_004399903.1| 50s ribosomal protein L35 [Mycoplasma mycoides subsp. capri LC
          str. 95010]
 gi|54036264|sp|Q6MU21|RL35_MYCMS RecName: Full=50S ribosomal protein L35
 gi|148887083|sp|Q2SSS2|RL35_MYCCT RecName: Full=50S ribosomal protein L35
 gi|42492268|emb|CAE76865.1| 50S ribosomal protein L35 [Mycoplasma mycoides subsp. mycoides SC
          str. PG1]
 gi|83283517|gb|ABC01449.1| 50S ribosomal protein L35 [Mycoplasma capricolum subsp.
          capricolum ATCC 27343]
 gi|256384357|gb|ACU78927.1| ribosomal protein L35 [Mycoplasma mycoides subsp. capri str.
          GM12]
 gi|256385189|gb|ACU79758.1| ribosomal protein L35 [Mycoplasma mycoides subsp. capri str.
          GM12]
 gi|296455487|gb|ADH21722.1| ribosomal protein L35 [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|301320845|gb|ADK69488.1| ribosomal protein L35 [Mycoplasma mycoides subsp. mycoides SC
          str. Gladysdale]
 gi|328801771|emb|CBW53924.1| 50s ribosomal protein L35 [Mycoplasma mycoides subsp. capri LC
          str. 95010]
          Length = 63

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMKT  S  KR ++ + G ++   A + H    ++ K  R      +++  D K + 
Sbjct: 1  MPKMKTKKSLAKRVTVKSNGTLKRAKAYRSHRATGKTTKQKRQLSKATIISKVDMKNLK 59


>gi|86149635|ref|ZP_01067865.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597415|ref|ZP_01100650.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561907|ref|YP_002343686.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|20139824|sp|Q9PIQ1|RL35_CAMJE RecName: Full=50S ribosomal protein L35
 gi|85839903|gb|EAQ57162.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190476|gb|EAQ94450.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359613|emb|CAL34398.1| 50s ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|284925520|gb|ADC27872.1| 50S ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          IA3902]
          Length = 63

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMK+  S+ KRF +    K++  +A + H + K+  K +R  R    + S + K V +
Sbjct: 1  MPKMKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRGLRTAKYVHSTNVKAVEK 59

Query: 61 NY 62
            
Sbjct: 60 ML 61


>gi|257126073|ref|YP_003164187.1| ribosomal protein L35 [Leptotrichia buccalis C-1013-b]
 gi|257050012|gb|ACV39196.1| ribosomal protein L35 [Leptotrichia buccalis C-1013-b]
          Length = 68

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 34/63 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT+  +KKR  +T +GK+  + +GK H + K+++K  +      +      +K+ +
Sbjct: 1  MPKMKTHKGTKKRVKVTGSGKISLRHSGKSHILTKKTHKRKKRLGQDAIAPKGAERKIKK 60

Query: 61 NYL 63
             
Sbjct: 61 ALA 63


>gi|225463238|ref|XP_002273609.1| PREDICTED: similar to structural constituent of ribosome [Vitis
           vinifera]
          Length = 165

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 8   SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           SS K RF +   G +R    GKRH    +S K  R  R   ++ +A AK + +
Sbjct: 108 SSFKMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKK 160


>gi|225619666|ref|YP_002720923.1| 50S ribosomal protein L35 [Brachyspira hyodysenteriae WA1]
 gi|296127839|ref|YP_003635091.1| ribosomal protein L35 [Brachyspira murdochii DSM 12563]
 gi|300870144|ref|YP_003785015.1| 50S ribosomal protein L35 [Brachyspira pilosicoli 95/1000]
 gi|259647345|sp|C0QZD1|RL35_BRAHW RecName: Full=50S ribosomal protein L35
 gi|225214485|gb|ACN83219.1| rpmI, 50S ribosomal protein L35 [Brachyspira hyodysenteriae WA1]
 gi|296019655|gb|ADG72892.1| ribosomal protein L35 [Brachyspira murdochii DSM 12563]
 gi|300687843|gb|ADK30514.1| 50S ribosomal protein L35 [Brachyspira pilosicoli 95/1000]
          Length = 67

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT S +KKRF  + TGKV+   A   H  + +     R  R   +    +  ++ R  
Sbjct: 4  KLKTKSGAKKRFRFSKTGKVKFAHAFGSHKFLSKRPDTKRKYRKARIADDTNMLEMPR-L 62

Query: 63 LPNG 66
          +P G
Sbjct: 63 MPYG 66


>gi|291460371|ref|ZP_06599761.1| ribosomal protein L35 [Oribacterium sp. oral taxon 078 str.
          F0262]
 gi|291416938|gb|EFE90657.1| ribosomal protein L35 [Oribacterium sp. oral taxon 078 str.
          F0262]
          Length = 79

 Score = 45.4 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 16 ITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
          +TATGK+    A K H + K+S K  R  R  +V    + K  ++  LP 
Sbjct: 30 MTATGKLVRNKANKSHILTKKSTKRKRGLRKDIVTDQTNVK-TMKKILPY 78


>gi|15895627|ref|NP_348976.1| 50S ribosomal protein L35 [Clostridium acetobutylicum ATCC 824]
 gi|20139605|sp|Q97GK6|RL35_CLOAB RecName: Full=50S ribosomal protein L35
 gi|15025371|gb|AAK80316.1|AE007736_6 Ribosomal protein L35 [Clostridium acetobutylicum ATCC 824]
 gi|325509775|gb|ADZ21411.1| 50S ribosomal protein L35 [Clostridium acetobutylicum EA 2018]
          Length = 65

 Score = 45.4 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPKMKT  ++ KRF  T TGK++   A + H + K+S K  RN R    ++    +K ++
Sbjct: 1  MPKMKTKKAAAKRFKATGTGKLKRGKAFRSHILTKKSTKTKRNLRKGGYVSET-QEKTMK 59

Query: 61 NYLPN 65
            LP 
Sbjct: 60 TLLPY 64


>gi|255024279|ref|ZP_05296265.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J1-208]
          Length = 56

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKT+  S KRF  T +GK++ +     H    +S K  R 
Sbjct: 12 MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRK 54


>gi|226529664|ref|NP_001149648.1| ribosomal protein L35 containing protein [Zea mays]
 gi|195628799|gb|ACG36227.1| ribosomal protein L35 containing protein [Zea mays]
 gi|223943669|gb|ACN25918.1| unknown [Zea mays]
          Length = 163

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 8   SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           SS K RF     G+VR   AGKRH    +S +  R  R   ++  A AK + +
Sbjct: 106 SSMKFRFRTMKDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKK 158


>gi|242034929|ref|XP_002464859.1| hypothetical protein SORBIDRAFT_01g027760 [Sorghum bicolor]
 gi|241918713|gb|EER91857.1| hypothetical protein SORBIDRAFT_01g027760 [Sorghum bicolor]
          Length = 164

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 8   SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           SS K RF     G+VR   AGKRH    +S +  R  R   ++  A AK + +
Sbjct: 107 SSMKFRFRTMKDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKK 159


>gi|126138542|ref|XP_001385794.1| hypothetical protein PICST_62530 [Scheffersomyces stipitis CBS
          6054]
 gi|126093072|gb|ABN67765.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 89

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA 44
          KMKT+ ++ KRF  T TG ++ + AG+ HG    S   +R+ 
Sbjct: 29 KMKTHKAAAKRFIKTGTG-IKRKQAGRNHGNGGFSANSLRHL 69


>gi|224071431|ref|XP_002303456.1| predicted protein [Populus trichocarpa]
 gi|222840888|gb|EEE78435.1| predicted protein [Populus trichocarpa]
          Length = 167

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 27/58 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK  SS K+RF     G +R    GK H    +S K  R  R    + +A AK + +
Sbjct: 105 KMKAYSSYKERFRTMNDGTIRRWREGKNHNAHSKSKKSKRRLRQPSTVPAAYAKVMKK 162


>gi|298243923|ref|ZP_06967730.1| ribosomal protein L35 [Ktedonobacter racemifer DSM 44963]
 gi|297556977|gb|EFH90841.1| ribosomal protein L35 [Ktedonobacter racemifer DSM 44963]
          Length = 67

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+ +  KR  +T +GK   +     H    +S+ F ++A     LA+AD +++ R  
Sbjct: 4  KLKTHKAMAKRVQVTGSGKFMRRKVAINHLRTNKSSHFTQSADKKFQLATADTRRLKR-L 62

Query: 63 LPN 65
          LP 
Sbjct: 63 LPY 65


>gi|294791032|ref|ZP_06756190.1| ribosomal protein L35 [Scardovia inopinata F0304]
 gi|294458929|gb|EFG27282.1| ribosomal protein L35 [Scardovia inopinata F0304]
          Length = 64

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+NS++ KR   T+ GK+    +  RH +  +S    R      VLA    K + 
Sbjct: 1  MPKMKSNSAASKRVRTTSKGKLIHNGSAMRHNLENKSAHRRRRMSDNKVLAKTQTKNLK 59


>gi|169334530|ref|ZP_02861723.1| hypothetical protein ANASTE_00933 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169259247|gb|EDS73213.1| hypothetical protein ANASTE_00933 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 64

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK++  + KRF    +G ++ + A + H + K++ K  R  R    +++AD K +
Sbjct: 1  MPKMKSHRGASKRFKRKKSGVIKRKKAFRNHILNKKTTKRKRKLRKGGYVSAADQKTI 58


>gi|254585419|ref|XP_002498277.1| ZYRO0G06490p [Zygosaccharomyces rouxii]
 gi|238941171|emb|CAR29344.1| ZYRO0G06490p [Zygosaccharomyces rouxii]
          Length = 92

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KR+  TA G  +   AG+ HG +  S + ++   G      +  +++ R  L
Sbjct: 33 MKTHKGTAKRWKKTADG-FKRGKAGRNHGNVGWSRRSLKVLSGKTPAHESHIQRLRR-LL 90

Query: 64 PN 65
          P 
Sbjct: 91 PY 92


>gi|148927316|ref|ZP_01810882.1| ribosomal protein L35 [candidate division TM7 genomosp. GTL1]
 gi|147887287|gb|EDK72745.1| ribosomal protein L35 [candidate division TM7 genomosp. GTL1]
          Length = 64

 Score = 44.7 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 31/62 (50%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          MPK K + S+KKRF +T TGKV     GK H + K+     R A  +  +  A  K + R
Sbjct: 1  MPKKKKHGSTKKRFKVTGTGKVLRDRTGKNHLLEKKGESRKRRANTSAEVTGALKKNIKR 60

Query: 61 NY 62
            
Sbjct: 61 AL 62


>gi|296083384|emb|CBI23273.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 44.3 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 8   SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           SS K RF +   G +R    GKRH    +S K  R  R   ++ +A AK + +
Sbjct: 88  SSFKMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKK 140


>gi|253795697|ref|YP_003038793.1| putative 50S ribosomal subunit protein L35 [Candidatus Hodgkinia
          cicadicola Dsem]
 gi|253740005|gb|ACT34340.1| putative 50S ribosomal subunit protein L35 [Candidatus Hodgkinia
          cicadicola Dsem]
          Length = 64

 Score = 44.3 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT S +KKRF   A G V+A  A +RH +  R  K  R  R + V++ AD +K+ R  
Sbjct: 4  KLKTRSGAKKRFRRLAGGGVKAWCACRRHKLYNR-RKTARQQRRSFVISLADVRKIKRVI 62

Query: 63 LP 64
           P
Sbjct: 63 KP 64


>gi|219850023|ref|YP_002464456.1| hypothetical protein Cagg_3162 [Chloroflexus aggregans DSM 9485]
 gi|219544282|gb|ACL26020.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
          Length = 68

 Score = 43.9 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+  +KKRF ITA+GK   Q  G R     R ++  R        + A+ +++++  
Sbjct: 5  KMKTHKGAKKRFKITASGKFL-QQRGVRGNKRNRPSRSQRAWGKDQPTSPAN-RRLLQVA 62

Query: 63 LPNGI 67
          LP G+
Sbjct: 63 LPYGL 67


>gi|225848299|ref|YP_002728462.1| 50S ribosomal protein L35 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643050|gb|ACN98100.1| ribosomal protein L35 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 67

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN ++ KR  ITA GKV+    G  H   K+S+K  R  R           K ++  
Sbjct: 5  KMKTNRTAAKRLKITAKGKVKYTKGGVSHYNTKKSSKRKRQGRRPQYAPKCIEHK-LKAL 63

Query: 63 LPN 65
          LPN
Sbjct: 64 LPN 66


>gi|168702630|ref|ZP_02734907.1| hypothetical protein GobsU_24096 [Gemmata obscuriglobus UQM 2246]
          Length = 68

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K KTN S KKR  +TATGK++    G+RH       K  R  R   ++   D  +V + Y
Sbjct: 4  KNKTNKSVKKRIRVTATGKLKYGKVGRRHLNAHIKTKRKRQLRKAGII--GDRPRVQKKY 61


>gi|47459463|ref|YP_016325.1| 50S ribosomal protein l35 [Mycoplasma mobile 163K]
 gi|81697034|sp|Q6KH17|RL35_MYCMO RecName: Full=50S ribosomal protein L35
 gi|47458793|gb|AAT28114.1| 50S ribosomal protein l35 [Mycoplasma mobile 163K]
          Length = 65

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMK   +  KR  I++TGKV+   A + H    +S K  R ++    +   D K++    
Sbjct: 6  KMKPKKALAKRIKISSTGKVKFGHAFRSHLAQNKSTKQKRQSKHGTFMHPTDYKRLKDLM 65


>gi|71851405|gb|AAZ44014.1| 50S ribosomal protein L35 [Mycoplasma synoviae 53]
          Length = 59

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MKT S+ KKR  +TATGK++ + A + H    ++ K  R +R    +  +D K+  
Sbjct: 1  MKTKSALKKRVKVTATGKIKREQAFRSHLAQNKTKKQKRQSRKASFMKRSDFKRFK 56


>gi|229817384|ref|ZP_04447666.1| hypothetical protein BIFANG_02646 [Bifidobacterium angulatum DSM
          20098]
 gi|229785173|gb|EEP21287.1| hypothetical protein BIFANG_02646 [Bifidobacterium angulatum DSM
          20098]
          Length = 61

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MK+NS++ KR   T TGK+    +  RH +  +S +  R  +   VLA   +KK+ R  
Sbjct: 1  MKSNSAASKRVRRTGTGKLMQAGSAMRHNLEHKSARKRRALKADQVLAGPQSKKLNRML 59


>gi|70930235|ref|XP_737058.1| ribosomal protein L35 [Plasmodium chabaudi chabaudi]
 gi|56512126|emb|CAH84874.1| ribosomal protein L35, putative [Plasmodium chabaudi chabaudi]
          Length = 102

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 26/50 (52%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLAS 52
          K KTN S  KRF IT  GK+  +  G  H + KR++      R   V+AS
Sbjct: 40 KPKTNKSIAKRFKITKNGKLIRKKCGGSHMLRKRTSSNRTALRKRTVIAS 89


>gi|298708555|emb|CBJ30640.1| expressed unknown protein [Ectocarpus siliculosus]
          Length = 74

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 8  SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          SS KKR  IT +G ++   +G RH    +    +R+   T ++     KKV+
Sbjct: 18 SSVKKRVRITGSGNLKRGQSGMRHITGPKPRSRLRSLGQTKLILGKQKKKVL 69


>gi|163845978|ref|YP_001634022.1| hypothetical protein Caur_0383 [Chloroflexus aurantiacus J-10-fl]
 gi|222523704|ref|YP_002568174.1| hypothetical protein Chy400_0410 [Chloroflexus sp. Y-400-fl]
 gi|163667267|gb|ABY33633.1| hypothetical protein Caur_0383 [Chloroflexus aurantiacus J-10-fl]
 gi|222447583|gb|ACM51849.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 68

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 1  MPKMK--TNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK  T+  +KKRF +TA+GK   Q  G R     R ++  R       ++  + +++
Sbjct: 1  MPKMKMKTHKGAKKRFKVTASGKFL-QQRGVRGNKRNRPSRSQRAWGKDQPISPTN-RRM 58

Query: 59 IRNYLPNGI 67
          ++  LP G+
Sbjct: 59 LQTALPYGL 67


>gi|150020816|ref|YP_001306170.1| 50S ribosomal protein L35 [Thermosipho melanesiensis BI429]
 gi|149793337|gb|ABR30785.1| ribosomal protein L35 [Thermosipho melanesiensis BI429]
          Length = 72

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+ S+ KRF +T  GK+  + A   H   K+    +R  +    +++ D  +V+R  
Sbjct: 10 KMKTHKSAAKRFRVTKNGKIIRRHAYAWHKTGKKRRSTLRKLKLETEVSAVDKDRVLRLL 69


>gi|221106676|ref|XP_002160649.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 174

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 30/61 (49%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+K+  +  KRF     G ++    GK H M+K+S+      RG++++      +V+   
Sbjct: 111 KIKSCKAVLKRFRRVRGGYLKRWRPGKHHKMLKKSSWRKFRLRGSILVKRKSHLRVLNKM 170

Query: 63  L 63
           +
Sbjct: 171 M 171


>gi|145341436|ref|XP_001415815.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576038|gb|ABO94107.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 113

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASA 53
           K+K  SS K RF +TA+GK+  +  GKRH    ++ K     R + ++   
Sbjct: 50  KIKPYSSYKGRFQVTASGKILRKRKGKRHCAFAKTPKQRMRLRSSTLVHET 100


>gi|50293037|ref|XP_448951.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528264|emb|CAG61921.1| unnamed protein product [Candida glabrata]
          Length = 95

 Score = 43.5 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KR+  T+TG  +   AG++HG I  S++ +++  G         K++ R  +
Sbjct: 35 MKTHRGALKRWRQTSTG-FKRGIAGRKHGNIGWSHRSLKSLTGRTDAHPTQMKRLRR-LM 92

Query: 64 PN 65
          P 
Sbjct: 93 PY 94


>gi|255026968|ref|ZP_05298954.1| 50S ribosomal protein L35 [Listeria monocytogenes FSL J2-003]
          Length = 45

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRN 43
          MPKMKT+  S KRF  T +GK++ +     H    +S K  R 
Sbjct: 1  MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRK 43


>gi|294787057|ref|ZP_06752311.1| ribosomal protein L35 [Parascardovia denticolens F0305]
 gi|315226706|ref|ZP_07868494.1| 50S ribosomal protein L35 [Parascardovia denticolens DSM 10105]
 gi|294485890|gb|EFG33524.1| ribosomal protein L35 [Parascardovia denticolens F0305]
 gi|315120838|gb|EFT83970.1| 50S ribosomal protein L35 [Parascardovia denticolens DSM 10105]
          Length = 64

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 30/58 (51%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
          MPKMK+NS+  KR   T+ GK+    +  RH +  +S    R      VLA A  KK+
Sbjct: 1  MPKMKSNSALSKRVRTTSKGKMVHNGSAMRHNLENKSASRRRRMSDNKVLAKAQTKKL 58


>gi|50425313|ref|XP_461250.1| DEHA2F20746p [Debaryomyces hansenii CBS767]
 gi|49656919|emb|CAG89639.1| DEHA2F20746p [Debaryomyces hansenii]
          Length = 119

 Score = 42.7 bits (100), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA 44
          KMKT+ ++ KRF  T  G  + + AG+ HG    S   IR  
Sbjct: 59 KMKTHKAAAKRFIKTGNG-FKRKQAGRNHGNGGFSANSIRQL 99


>gi|323507977|emb|CBQ67848.1| related to 50S ribosomal protein L35 [Sporisorium reilianum]
          Length = 139

 Score = 42.7 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 3   KMKTNSSSKKRFSITATGK-------VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADA 55
           K+K++S +KKR+S   +G         +   AGKRH     +   + N  GT +      
Sbjct: 68  KLKSHSGTKKRWSPLGSGSGKAYQLVFKRGLAGKRHLNSGMARDRLNNLGGTALSPRGRI 127

Query: 56  KKVIRNYL 63
            + +R  L
Sbjct: 128 NRTLRRLL 135


>gi|156741419|ref|YP_001431548.1| 50S ribosomal protein L35 [Roseiflexus castenholzii DSM 13941]
 gi|156232747|gb|ABU57530.1| ribosomal protein L35 [Roseiflexus castenholzii DSM 13941]
          Length = 67

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KRF++T TGK+   A  + H   + S + +++   T  +     ++ +R  L
Sbjct: 1  MKTHKGAAKRFTLTGTGKMVRAAGRRGHFRRRMSLRILQHLDRTFEVHKT-VQRRLRRAL 59

Query: 64 PN 65
          P 
Sbjct: 60 PY 61


>gi|71032557|ref|XP_765920.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352877|gb|EAN33637.1| hypothetical protein TP01_0393 [Theileria parva]
          Length = 134

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 23/50 (46%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLAS 52
           K KTN S  KRF ITATGK+  + A  +H    +            ++ S
Sbjct: 67  KPKTNHSVAKRFKITATGKLMYRRATTQHKQRHKRRGAKARLHRNGIITS 116


>gi|154249348|ref|YP_001410173.1| 50S ribosomal protein L35 [Fervidobacterium nodosum Rt17-B1]
 gi|154153284|gb|ABS60516.1| ribosomal protein L35 [Fervidobacterium nodosum Rt17-B1]
          Length = 67

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+ ++ KRF +T  GK+  + A   H   K+    +R  R   V+A +D  +++R  
Sbjct: 5  KMKTSKTAAKRFKVTKNGKIMRRHANAWHKTGKKRRSTMRALRLEDVIAKSDESRILRLL 64


>gi|71003838|ref|XP_756585.1| hypothetical protein UM00438.1 [Ustilago maydis 521]
 gi|46096116|gb|EAK81349.1| predicted protein [Ustilago maydis 521]
          Length = 143

 Score = 42.4 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 3   KMKTNSSSKKRFSITATGK-------VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADA 55
           K+K++S +KKR++   +G         +   AGK H         + N  GT +      
Sbjct: 72  KLKSHSGTKKRWTPLGSGSGKAYQLTFKRGLAGKSHLNSHMPRDRLNNLGGTALSPRGRI 131

Query: 56  KKVIRNYL 63
            + +R  L
Sbjct: 132 NRTLRRLL 139


>gi|50365005|ref|YP_053430.1| 50S ribosomal protein L35 [Mesoplasma florum L1]
 gi|54036253|sp|Q6F1S7|RL35_MESFL RecName: Full=50S ribosomal protein L35
 gi|50363561|gb|AAT75546.1| 50S ribosomal protein L35 [Mesoplasma florum L1]
          Length = 64

 Score = 42.4 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          MPKMK+  S  KR      G ++   A + H    ++ K  R+     ++   D K++ 
Sbjct: 1  MPKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIK 59


>gi|330888318|gb|EGH20979.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. mori str.
          301020]
          Length = 46

 Score = 42.0 bits (98), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 22 VRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          ++ + A K H + K S K  R  RG+ +L  +D  KV R  
Sbjct: 3  IKHKHAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVERML 43


>gi|255070433|ref|XP_002507298.1| predicted protein [Micromonas sp. RCC299]
 gi|226522573|gb|ACO68556.1| predicted protein [Micromonas sp. RCC299]
          Length = 151

 Score = 42.0 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           K+K  SS K+RF IT+TGK+  +  GKRH    +S K     R   ++  A A  + +
Sbjct: 88  KLKPLSSWKRRFQITSTGKILRKQKGKRHKSFSKSRKRRLRLRTPKLVHQASATHIKK 145


>gi|307103987|gb|EFN52243.1| hypothetical protein CHLNCDRAFT_139123 [Chlorella variabilis]
          Length = 79

 Score = 41.6 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+K  SS K+RF +TATGKV     G  H    ++ + +    G  V+    AK V +
Sbjct: 14 KVKPYSSYKRRFKLTATGKVLYPRPGHVHKRFNKTKRQLFELSGMQVMKPRYAKTVKK 71


>gi|331657697|ref|ZP_08358659.1| ribosomal protein L35 [Escherichia coli TA206]
 gi|331055945|gb|EGI27954.1| ribosomal protein L35 [Escherichia coli TA206]
          Length = 49

 Score = 41.6 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 17 TATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
          T  G  + + A  RH + K++ K  R+ R   +++  D   VI   LP 
Sbjct: 1  TGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIAC-LPY 48


>gi|315932043|gb|EFV10996.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni 327]
          Length = 60

 Score = 41.2 bits (96), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MK+  S+ KRF +    K++  +A + H + K+  K +R+ R    + S + K V +  
Sbjct: 1  MKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRDLRTAKYVHSTNVKAVEKML 58


>gi|239617824|ref|YP_002941146.1| ribosomal protein L35 [Kosmotoga olearia TBF 19.5.1]
 gi|239506655|gb|ACR80142.1| ribosomal protein L35 [Kosmotoga olearia TBF 19.5.1]
          Length = 67

 Score = 41.2 bits (96), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          KMKT+ ++ KRF IT +GKV  Q +GK H   K+     R  +    + ++   K I+N
Sbjct: 5  KMKTHKATAKRFKITGSGKVMRQHSGKNHNTGKKKENNRREVKKWEQVKNSPLAKRIKN 63


>gi|125863567|gb|ABN58608.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863577|gb|ABN58617.1| YNL122C [Saccharomyces cerevisiae]
          Length = 115

 Score = 41.2 bits (96), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           MKT+  + KR+  T     +   AG++HG I  S++ ++   G  +   A +K + R  L
Sbjct: 55  MKTHKGTAKRWRRTGN-TFKRGIAGRKHGNIGWSHRSLKALTGRKIAHPAYSKHLKR-LL 112

Query: 64  PN 65
           P 
Sbjct: 113 PY 114


>gi|157364202|ref|YP_001470969.1| 50S ribosomal protein L35 [Thermotoga lettingae TMO]
 gi|157314806|gb|ABV33905.1| ribosomal protein L35 [Thermotoga lettingae TMO]
          Length = 67

 Score = 41.2 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMK + ++ KRF IT +GKV    A  RH   KR    +R  R    LA  D K+V R  
Sbjct: 5  KMKVSKTASKRFKITKSGKVMFNHARTRHTTGKRRRSALRVLRKKDALAKGDEKRVKRLL 64


>gi|215400776|ref|YP_002327537.1| ribosomal protein L35 [Vaucheria litorea]
 gi|194441226|gb|ACF70954.1| ribosomal protein L35 [Vaucheria litorea]
          Length = 66

 Score = 41.2 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K K   + KKR+  T       + A K H + K+S+K  RN   ++V+  +D + + R  
Sbjct: 5  KSKIRKAVKKRYKQTRKNNFIRKKAFKGHILEKKSSKRKRNLSHSVVVTFSDLRAIRRML 64

Query: 63 L 63
          L
Sbjct: 65 L 65


>gi|195952839|ref|YP_002121129.1| ribosomal protein L35 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932451|gb|ACG57151.1| ribosomal protein L35 [Hydrogenobaculum sp. Y04AAS1]
          Length = 67

 Score = 41.2 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKTN +  KRF +TA G ++   A   H   ++     R  R   ++ +   ++ ++  
Sbjct: 4  KMKTNRTMAKRFKLTANGHIKRAKANGSHYNTRKPKDRKRRLRKKTLITNPKVERKLKPL 63

Query: 63 LPN 65
          L N
Sbjct: 64 LQN 66


>gi|125863514|gb|ABN58563.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863524|gb|ABN58572.1| YNL112C [Saccharomyces cerevisiae]
 gi|125863557|gb|ABN58599.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863607|gb|ABN58644.1| YNL122C [Saccharomyces cerevisiae]
 gi|190409108|gb|EDV12373.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
          Length = 115

 Score = 40.8 bits (95), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           MKT+  + KR+  T     +   AG++HG I  S++ ++   G  +   A +K + R  L
Sbjct: 55  MKTHKGTAKRWRRTGN-TFKRGIAGRKHGNIGWSHRSLKALTGRKIAHPAYSKHLKR-LL 112

Query: 64  PN 65
           P 
Sbjct: 113 PY 114


>gi|224138324|ref|XP_002326574.1| predicted protein [Populus trichocarpa]
 gi|222833896|gb|EEE72373.1| predicted protein [Populus trichocarpa]
          Length = 123

 Score = 40.8 bits (95), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 26/58 (44%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
           KMK  SS K RF     G +R    GK H    +S K  R  R    + +A AK + +
Sbjct: 61  KMKAYSSYKDRFRTMNDGTIRRWREGKNHNAHLKSKKSRRRLRQPSTVPAAYAKVMKK 118


>gi|217077272|ref|YP_002334990.1| ribosomal protein L35 [Thermosipho africanus TCF52B]
 gi|217037127|gb|ACJ75649.1| ribosomal protein L35 [Thermosipho africanus TCF52B]
          Length = 67

 Score = 40.8 bits (95), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KMKT+ S+ KRF +T  GK+  + A   H   K+    +R  +    + + D  +V+R  
Sbjct: 5  KMKTHKSAAKRFRVTKNGKIIRRKAYAWHKTGKKRRSTLRRLKVETEVKACDKDRVLRML 64


>gi|283794892|ref|YP_003359245.1| ribosomal protein L35 [Cryptomonas paramecium]
 gi|253981864|gb|ACT46781.1| ribosomal protein L35 [Cryptomonas paramecium]
          Length = 65

 Score = 40.8 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNA 44
          M K+KT  S+KKRF  T       + A K H + K+S++  R  
Sbjct: 1  MSKLKTRHSAKKRFHQTTNQNFMRKKAFKNHFLEKKSSQRKRRL 44


>gi|6324207|ref|NP_014277.1| hypothetical protein YNL122C [Saccharomyces cerevisiae S288c]
 gi|1730770|sp|P53921|YNM2_YEAST RecName: Full=Putative mitochondrial ribosomal protein YNL122C
 gi|239983826|sp|A6ZRW2|YMN2_YEAS7 RecName: Full=Putative mitochondrial ribosomal protein SCY_4673
 gi|1183951|emb|CAA93385.1| N1901 [Saccharomyces cerevisiae]
 gi|1302052|emb|CAA96003.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|51012629|gb|AAT92608.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863484|gb|ABN58536.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863494|gb|ABN58545.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863504|gb|ABN58554.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863536|gb|ABN58581.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863547|gb|ABN58590.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863587|gb|ABN58626.1| YNL122C [Saccharomyces cerevisiae]
 gi|125863597|gb|ABN58635.1| YNL122C [Saccharomyces cerevisiae]
 gi|151944416|gb|EDN62694.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|256273842|gb|EEU08764.1| YNL122C-like protein [Saccharomyces cerevisiae JAY291]
 gi|259149240|emb|CAY82482.1| EC1118_1N9_2377p [Saccharomyces cerevisiae EC1118]
 gi|285814533|tpg|DAA10427.1| TPA: hypothetical protein YNL122C [Saccharomyces cerevisiae S288c]
          Length = 115

 Score = 40.8 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
           MKT+  + KR+  T     +   AG++HG I  S++ ++   G  +   A +K + R  L
Sbjct: 55  MKTHKGTAKRWRRTGN-TFKRGIAGRKHGNIGWSHRSLKALTGRKIAHPAYSKHLKR-LL 112

Query: 64  PN 65
           P 
Sbjct: 113 PY 114


>gi|196232415|ref|ZP_03131268.1| ribosomal protein L35 [Chthoniobacter flavus Ellin428]
 gi|196223487|gb|EDY18004.1| ribosomal protein L35 [Chthoniobacter flavus Ellin428]
          Length = 69

 Score = 40.4 bits (94), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 5  KTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          KT  S+ KRF +TA+GK+  +  G RH    +S+K  R       +      ++    
Sbjct: 9  KTKKSAAKRFKLTASGKMLRRKPGLRHLASSKSSKRKRKLGKAGQVHETMIDRIKECL 66


>gi|50312241|ref|XP_456152.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645288|emb|CAG98860.1| KLLA0F24068p [Kluyveromyces lactis]
          Length = 95

 Score = 40.4 bits (94), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KR+  TA    +   AG+ HG    S   +++  G  +  S    ++ R  L
Sbjct: 35 MKTHKGAAKRWRKTAN-SFKRGKAGRNHGNAGWSRNSLKSLSGRSLADSTHMHRLKR-LL 92

Query: 64 PN 65
          P 
Sbjct: 93 PY 94


>gi|50557386|ref|XP_506101.1| YALI0F31559p [Yarrowia lipolytica]
 gi|49651971|emb|CAG78914.1| YALI0F31559p [Yarrowia lipolytica]
          Length = 95

 Score = 40.4 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
          +KT  +   R  I  +GK+     G++HG    S   +R   G   L     K V + 
Sbjct: 31 VKTKKAVANRIKICGSGKITRGKTGRKHGNTGWSAALLRKKTGMTELTGFQKKHVKKY 88


>gi|315927162|gb|EFV06512.1| ribosomal protein L35 [Campylobacter jejuni subsp. jejuni
          DFVF1099]
          Length = 60

 Score = 40.0 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MK+  S+ KRF +    K++  +A + H + K+  K +R  R    + S + K V +  
Sbjct: 1  MKSVKSAVKRFKV-GKNKIKRGSAFRSHILTKKPAKRMRGLRTAKYVHSTNVKAVEKML 58


>gi|302813577|ref|XP_002988474.1| hypothetical protein SELMODRAFT_127986 [Selaginella
          moellendorffii]
 gi|300143876|gb|EFJ10564.1| hypothetical protein SELMODRAFT_127986 [Selaginella
          moellendorffii]
          Length = 62

 Score = 39.7 bits (92), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%)

Query: 8  SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRN 61
           +S KRF +T  G +  + AGK+H ++K+++K  +     + +  +D   ++R 
Sbjct: 1  KASAKRFKVTGGGILMRRRAGKQHLLVKKNSKRRKRLSKLVPVKRSDYTGIVRA 54


>gi|326429847|gb|EGD75417.1| hypothetical protein PTSG_06493 [Salpingoeca sp. ATCC 50818]
          Length = 208

 Score = 39.7 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 9   SSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
           +   RF +T +G ++    G+ H    +S K  R  R   VL S    K +R  +  
Sbjct: 152 AVASRFKLTKSGLIKYWRRGRVHNSQAKSKKTHRQLRKAKVLRSGTMFKKLRRAMQY 208


>gi|330898077|gb|EGH29496.1| 50S ribosomal protein L35 [Pseudomonas syringae pv. japonica str.
          M301072PT]
          Length = 40

 Score = 39.3 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 26 AAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           A K H + K S K  R  RG+ +L  +D  KV R  
Sbjct: 1  HAFKSHILTKMSTKRKRQLRGSSLLHPSDVAKVERML 37


>gi|320159470|ref|YP_004172694.1| putative 50S ribosomal protein L35 [Anaerolinea thermophila
          UNI-1]
 gi|319993323|dbj|BAJ62094.1| putative 50S ribosomal protein L35 [Anaerolinea thermophila
          UNI-1]
          Length = 78

 Score = 38.9 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          K+KT+ ++ KRF +T +G +     GK H   + S +        + +      K +   
Sbjct: 11 KLKTHKATSKRFRLTGSGVLVRTKGGKSHLRRRTSKRTKALFTEMLPVQGEGIIKRVERL 70

Query: 63 LPN 65
           P 
Sbjct: 71 APY 73


>gi|321309615|ref|YP_004191944.1| 50S ribosomal protein L35 [Mycoplasma haemofelis str. Langford 1]
 gi|319801459|emb|CBY92105.1| ribosomal protein L35 [Mycoplasma haemofelis str. Langford 1]
          Length = 69

 Score = 38.5 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 11 KKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKK 57
           KR  +   GK++ + + + H    +S K  R AR +++L  A  K+
Sbjct: 16 SKRILVLGNGKMKRKHSHRSHLASNKSTKQKRQARSSVILNKAQVKR 62


>gi|328862829|gb|EGG11929.1| hypothetical protein MELLADRAFT_51433 [Melampsora larici-populina
           98AG31]
          Length = 150

 Score = 38.1 bits (88), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 7   NSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLP 64
             S+ KRF +T  G+ +   AGK+H +   S+        T           +R  LP
Sbjct: 50  KPSTSKRFFVTGHGQFKRSQAGKQHLITGTSHIRKEEINKTHTTK-------LRKLLP 100


>gi|153809788|ref|ZP_01962456.1| hypothetical protein RUMOBE_00169 [Ruminococcus obeum ATCC 29174]
 gi|149833966|gb|EDM89046.1| hypothetical protein RUMOBE_00169 [Ruminococcus obeum ATCC 29174]
          Length = 43

 Score = 38.1 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 23 RAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
              A K H + K+S K  RN R   V+ S + K + +  
Sbjct: 1  MRNKAYKSHILTKKSQKRKRNLRKATVVDSTNLKNIKKAL 40


>gi|297623448|ref|YP_003704882.1| 50S ribosomal protein L35 [Truepera radiovictrix DSM 17093]
 gi|297164628|gb|ADI14339.1| ribosomal protein L35 [Truepera radiovictrix DSM 17093]
          Length = 41

 Score = 37.7 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 26 AAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
           +GKRH   K+S K IR  R  +V+A+ DAK++ +  LP 
Sbjct: 2  RSGKRHLNYKKSGKRIRQGRTDLVIAAPDAKRI-KALLPY 40


>gi|255711462|ref|XP_002552014.1| KLTH0B05214p [Lachancea thermotolerans]
 gi|238933392|emb|CAR21576.1| KLTH0B05214p [Lachancea thermotolerans]
          Length = 91

 Score = 37.7 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 4  MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          MKT+  + KR+  T+T   +   AG+ HG        +++  G  +      K + R  L
Sbjct: 31 MKTHKGTAKRWRKTST-SYKRGRAGRNHGNAGWGKSTLKSLDGKTLAHPTHIKHLKR-LL 88

Query: 64 PN 65
          P 
Sbjct: 89 PY 90


>gi|197294238|ref|YP_001798779.1| 50S ribosomal protein L35 [Candidatus Phytoplasma australiense]
 gi|226725045|sp|B1V8Z9|RL35_PHYAS RecName: Full=50S ribosomal protein L35
 gi|171853565|emb|CAM11431.1| 50S ribosomal protein L35 [Candidatus Phytoplasma australiense]
          Length = 65

 Score = 37.3 bits (86), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
          M K K++S  KKR  IT   K+    A K H    ++ K  R  RG + +  +D K++ 
Sbjct: 1  MIKKKSHSGLKKRIKITKKKKLLRGHAYKNHLAASKTTKQNRQLRGVVCVDHSDYKRIK 59


>gi|163790749|ref|ZP_02185175.1| 50S ribosomal protein L35 [Carnobacterium sp. AT7]
 gi|159873929|gb|EDP68007.1| 50S ribosomal protein L35 [Carnobacterium sp. AT7]
          Length = 39

 Score = 37.3 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNK 39
          MPK KT+  S KRF  T  G ++   +   H    +S K
Sbjct: 1  MPKQKTHRGSAKRFKRTGNGGLKRHHSKTSHMFANKSQK 39


>gi|156841458|ref|XP_001644102.1| hypothetical protein Kpol_505p21 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156114737|gb|EDO16244.1| hypothetical protein Kpol_505p21 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 85

 Score = 37.3 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 4  MKTNSSSKKRFSITAT-GKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
          MKT+  + KR+    +    +   +G++HG +  S + +++  G     +    + +R  
Sbjct: 23 MKTHKGTAKRWKFIKSLDTFKRGKSGRQHGNVGWSQRSLKHLSGRTYAHTTHVSR-LRKL 81

Query: 63 LPN 65
          LP 
Sbjct: 82 LPY 84


>gi|308799017|ref|XP_003074289.1| unnamed protein product [Ostreococcus tauri]
 gi|116000460|emb|CAL50140.1| unnamed protein product [Ostreococcus tauri]
          Length = 84

 Score = 37.0 bits (85), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 3  KMKTNSSSKKRFSITATG-KVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIR 60
          K+K+ SS + RF ++ +G K+  +  GKRH    ++ K  R  R T  + +   + + +
Sbjct: 22 KIKSYSSYRFRFKMSGSGRKIMRKQKGKRHCAFAKTPKRRRMLRKTTTVDATLVQPMKK 80


>gi|283769360|ref|ZP_06342259.1| ribosomal protein L35 [Bulleidia extructa W1219]
 gi|283104017|gb|EFC05401.1| ribosomal protein L35 [Bulleidia extructa W1219]
          Length = 73

 Score = 37.0 bits (85), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 11 KKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKV 58
           KR  +T +GK+  Q     H    +++K  ++       +++D K+V
Sbjct: 20 AKRSKLTGSGKISVQHNYVSHFAANKTHKQKKHLAKDTTASASDVKRV 67


>gi|255323670|ref|ZP_05364800.1| ribosomal protein L35 [Campylobacter showae RM3277]
 gi|255299384|gb|EET78671.1| ribosomal protein L35 [Campylobacter showae RM3277]
          Length = 48

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 18 ATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVI 59
             K++  +A + H + K+S    R+ R    + S +   V 
Sbjct: 2  GKNKIKRGSAFRSHILTKKSRNRKRDLRSPQYVDSTNVASVK 43


>gi|254424314|ref|ZP_05038032.1| ribosomal protein L35 [Synechococcus sp. PCC 7335]
 gi|196191803|gb|EDX86767.1| ribosomal protein L35 [Synechococcus sp. PCC 7335]
          Length = 43

 Score = 36.2 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 23 RAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
            + A K H + +++    R       +   D + V    +P 
Sbjct: 1  MRRKAFKNHLLERKNQDRKRKLSKIATVHETDVQNV-ELMMPY 42


>gi|254569414|ref|XP_002491817.1| Putative protein of unknown function [Pichia pastoris GS115]
 gi|238031614|emb|CAY69537.1| Putative protein of unknown function [Pichia pastoris GS115]
 gi|328351683|emb|CCA38082.1| Uncharacterized protein YNL122C [Pichia pastoris CBS 7435]
          Length = 116

 Score = 35.8 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 4   MKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGT---MVLASADAKKVIR 60
           +KT+ ++ KR+  T  G  +   +G++HG    SN+ +    GT       + + K  + 
Sbjct: 52  LKTHRATYKRWRKTGNG-YKRGLSGRKHGNAGWSNRVLGKLVGTCQATSRGAGNQKARLA 110

Query: 61  NYLPN 65
             LPN
Sbjct: 111 KLLPN 115


>gi|241948095|ref|XP_002416770.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223640108|emb|CAX44354.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 89

 Score = 35.8 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLA 51
          KMK++ ++  RF   A+G ++ + AG  HG  + S   ++  RG + ++
Sbjct: 29 KMKSHKAAANRFIKRASG-LKRKQAGVNHGNGRFSYSALKGLRGFVEVS 76


>gi|238879403|gb|EEQ43041.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 89

 Score = 35.4 bits (81), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 3  KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLA 51
          KMK++ ++  RF   A+G ++ + AG  HG  + S   ++  RG + ++
Sbjct: 29 KMKSHKAAANRFIKRASG-LKRKQAGVNHGNGRFSYSALKGLRGFVEVS 76


>gi|71749252|ref|XP_827965.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70833349|gb|EAN78853.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 681

 Score = 35.0 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 17/78 (21%)

Query: 1  MPKMKTNSSSKKRFSITATGKV------------RAQAAGKRHGMIKRSNKFIRNARGTM 48
          MPK+K  S + KR +     KV            +A  A K+ G+  +  K  R      
Sbjct: 1  MPKVK--SGASKRVTSRQRHKVERKKREHKRDLRKAAKAMKKSGLGPKRTKRTRELARLA 58

Query: 49 VL---ASADAKKVIRNYL 63
          +    A  D + ++R  L
Sbjct: 59 LKVSNAHPDKESILRRVL 76


>gi|168010095|ref|XP_001757740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691016|gb|EDQ77380.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 202

 Score = 35.0 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 8   SSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFI 41
           SS KKRF   A G+ +   +GK+H    ++ KF 
Sbjct: 112 SSYKKRFRGMANGEYKRWRSGKQHNAHSKAIKFT 145


>gi|182418941|ref|ZP_02950198.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237669029|ref|ZP_04529013.1| conserved hypothetical protein [Clostridium butyricum E4 str.
          BoNT E BL5262]
 gi|182377224|gb|EDT74792.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657377|gb|EEP54933.1| putative phage protein XkdT [Clostridium butyricum E4 str. BoNT E
          BL5262]
          Length = 346

 Score = 35.0 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 9  SSKKRFSITATGKVRAQAAGKRHGMIKRSNKF 40
          S +KRF  T++GK     A K HG+ K+++K 
Sbjct: 47 SLEKRFVTTSSGKYLEYNA-KDHGVTKKTSKQ 77


>gi|329943113|ref|ZP_08291887.1| ribosomal protein L35 [Chlamydophila psittaci Cal10]
 gi|328814660|gb|EGF84650.1| ribosomal protein L35 [Chlamydophila psittaci Cal10]
          Length = 49

 Score = 35.0 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 16 ITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYL 63
          +T +G+++    GKRH + K+S++  RN     ++         R  L
Sbjct: 1  MTGSGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKRMML 48


>gi|195453202|ref|XP_002073684.1| GK14238 [Drosophila willistoni]
 gi|194169769|gb|EDW84670.1| GK14238 [Drosophila willistoni]
          Length = 176

 Score = 34.6 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
           K KT+ +  KRF     G       G+   M K+S+   R  R 
Sbjct: 83  KRKTSKAVLKRFKRLDWGAWIRTHTGRHKKMFKKSSALRRRLRQ 126


>gi|198450886|ref|XP_001358167.2| GA12267 [Drosophila pseudoobscura pseudoobscura]
 gi|198131237|gb|EAL27304.2| GA12267 [Drosophila pseudoobscura pseudoobscura]
          Length = 175

 Score = 34.6 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
           K KT  +  KRF     G      +G++  + K+SN   R  R 
Sbjct: 82  KRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSNALRRRLRQ 125


>gi|195143671|ref|XP_002012821.1| GL23809 [Drosophila persimilis]
 gi|194101764|gb|EDW23807.1| GL23809 [Drosophila persimilis]
          Length = 175

 Score = 34.6 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARG 46
           K KT  +  KRF     G      +G++  + K+SN   R  R 
Sbjct: 82  KRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSNALRRRLRQ 125


>gi|145492816|ref|XP_001432405.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399516|emb|CAK65008.1| unnamed protein product [Paramecium tetraurelia]
          Length = 165

 Score = 34.6 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 3   KMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           K+  N    KR  I    +++ +  G RH     S   +R  R T  ++  +  K +R  
Sbjct: 68  KIGDNKGVMKRVKIVGPRRLKFKPPGSRHLNRNCSKAILRRMRRTRYISDVNMPK-MRKL 126

Query: 63  LP 64
           LP
Sbjct: 127 LP 128


>gi|328866458|gb|EGG14842.1| hypothetical protein DFA_10715 [Dictyostelium fasciculatum]
          Length = 105

 Score = 34.6 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query: 3  KMKTNSSSKKRFSITATGKVR 23
          K K+ S+ KKRF +T TGKV+
Sbjct: 30 KHKSKSACKKRFMLTKTGKVK 50


>gi|119488084|ref|ZP_01621528.1| 50S ribosomal protein L20 [Lyngbya sp. PCC 8106]
 gi|119455373|gb|EAW36512.1| 50S ribosomal protein L20 [Lyngbya sp. PCC 8106]
          Length = 43

 Score = 34.3 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 23 RAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65
            + A K H +  + +        T  +   DA+ V R  +P 
Sbjct: 1  MRRKAYKSHLLQHKKSSRKSRLSKTTEVHERDAENV-RLMMPY 42


>gi|325990026|ref|YP_004249725.1| 50S ribosomal protein L35 [Mycoplasma suis KI3806]
 gi|323575111|emb|CBZ40773.1| Ribosomal protein L35 [Mycoplasma suis]
          Length = 75

 Score = 33.9 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 9  SSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAK 56
          S  KR  I  +G ++ + + + H    +S K  R  R +++   A  K
Sbjct: 15 SLAKRVVILGSGAIKRKRSHRSHCASAKSTKRKRKLRKSVLFNQAQYK 62


>gi|320528352|ref|ZP_08029514.1| ribosomal protein L35 [Solobacterium moorei F0204]
 gi|320131266|gb|EFW23834.1| ribosomal protein L35 [Solobacterium moorei F0204]
          Length = 73

 Score = 33.9 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 11 KKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNY 62
           KR  +TATGK++ Q     H    +++K   +   +    S+D K+  +  
Sbjct: 20 AKRSKLTATGKLKVQHNFVSHFAANKTHKQKMHLAKSTTAHSSDLKRTRQLL 71


>gi|51209961|ref|YP_063625.1| ribosomal protein L35 [Gracilaria tenuistipitata var. liui]
 gi|68053113|sp|Q6B8T5|RK35_GRATL RecName: Full=50S ribosomal protein L35, chloroplastic
 gi|50657715|gb|AAT79700.1| 50S ribosomal protein L35 [Gracilaria tenuistipitata var. liui]
          Length = 66

 Score = 33.9 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 1  MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASAD 54
          M K++T+ S  KRF   +  K+  + AG+ H + K+S+K  +  R  + L   D
Sbjct: 1  MCKLRTSKSIIKRFKFKSKNKILRRMAGRSHLLQKKSSKRKQKLRKIVNLKKID 54


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.176    0.626 

Lambda     K      H
   0.267   0.0544    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,541,200,289
Number of Sequences: 14124377
Number of extensions: 60874355
Number of successful extensions: 145342
Number of sequences better than 10.0: 1616
Number of HSP's better than 10.0 without gapping: 2877
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 141961
Number of HSP's gapped (non-prelim): 3043
length of query: 67
length of database: 4,842,793,630
effective HSP length: 39
effective length of query: 28
effective length of database: 4,291,942,927
effective search space: 120174401956
effective search space used: 120174401956
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.8 bits)
S2: 77 (33.9 bits)