HHsearch alignment for GI: 254780320 and conserved domain: COG0290
>COG0290 InfC Translation initiation factor 3 (IF-3) [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=359.59 Aligned_cols=136 Identities=49% Similarity=0.842 Sum_probs=133.9
Q ss_pred CHHHHHCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 93378579949999887558779998457888888765432110022222002689740086799999999999960379
Q gi|254780320|r 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 (136)
Q Consensus 1 l~~A~~~~lDLV~vs~~~~PPVcKi~dygK~~ye~~Kk~k~~Kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~ 80 (136)
T Consensus 40 L~lA~e~~LDLV~Ispna~PPVcKImDYGKfkye~~KK~kEakKkQk~i~vKEik~rp~Id~hD~~~K~k~~~rFLe~Gd 119 (176)
T COG0290 40 LKLAEEAGLDLVEISPNAKPPVCKIMDYGKFKYEQKKKAKEAKKKQKQIQVKEIKLRPKIDEHDYETKLKNARRFLEKGD 119 (176)
T ss_pred HHHHHHCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999759988998689999844862052067888888887762574577789996157573308999999999987698
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC
Q ss_conf 19999997097435735689999999998422432036773248769999920469
Q gi|254780320|r 81 KVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKCV 136 (136)
Q Consensus 81 kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~~pk~~Gr~~~~~l~Pkkv 136 (136)
T Consensus 120 kVKvtirfrGRe~~h~elG~~vl~r~~~~~~~~~~ve~~pk~egr~m~m~laPkk~ 175 (176)
T COG0290 120 KVKVTIRFRGREMAHQELGVKVLERVAEDLEDIAKVESEPKMEGRQMIMVLAPKKK 175 (176)
T ss_pred EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCC
T ss_conf 59999998155560699999999999998654415512601178658999744668