HHsearch alignment for GI: 254780320 and conserved domain: pfam00707

>pfam00707 IF3_C Translation initiation factor IF-3, C-terminal domain.
Probab=99.96  E-value=5e-30  Score=200.05  Aligned_cols=87  Identities=52%  Similarity=0.866  Sum_probs=85.1

Q ss_pred             CCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             22200268974008679999999999996037919999997097435735689999999998422432036773248769
Q gi|254780320|r   48 STGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM  127 (136)
Q Consensus        48 ~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~~pk~~Gr~~  127 (136)
T Consensus         1 ~v~~KEir~~~~I~~hDl~~K~k~a~~FL~~G~kVKv~i~frGRE~~~~e~g~~~l~~i~~~l~~~~~ve~~pk~eGr~~   80 (87)
T pfam00707         1 VVQVKEIKLRPKIDEHDLEVKLKHARKFLEKGDKVKVTIRFRGREIAHPELGRELLDRFAEDLEDIATVEKPPKMEGRNM   80 (87)
T ss_pred             CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEE
T ss_conf             95778999726877015999999999999779949999998487565889999999999998551537515876548759


Q ss_pred             EEEEEEC
Q ss_conf             9999204
Q gi|254780320|r  128 IMILSSK  134 (136)
Q Consensus       128 ~~~l~Pk  134 (136)
T Consensus        81 ~~~l~Pk   87 (87)
T pfam00707        81 TMILAPK   87 (87)
T ss_pred             EEEEECC
T ss_conf             9999369