HHsearch results for GI: 254780320 and protein with PDBid: 1i96_V

>1i96_V Translation initiation factor IF3; 30S ribosome; HET: WO2; 4.20A {Thermus thermophilus} SCOP: d.68.1.1
Probab=99.97  E-value=1e-30  Score=202.90  Aligned_cols=87  Identities=39%  Similarity=0.718  Sum_probs=85.3

Q ss_pred             CCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf             20026897400867999999999999603791999999709743573568999999999842243203677324876999
Q gi|254780320|r   50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM  129 (136)
Q Consensus        50 ~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~~pk~~Gr~~~~  129 (136)
                      ++|||||+|+||+|||++|+++|++||++||+|+|+|+|||||++|+|.|.++|++|+++|+++|++|++|+++||+|+|
T Consensus         1 evKEIrl~~~I~~hDl~~K~k~a~kFL~~G~kVKv~v~frGRE~~~~e~g~~~l~~i~~~l~~~~~ve~~pk~eGr~~~~   80 (89)
T 1i96_V            1 EVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNM   80 (89)
T ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEE
T ss_conf             96138962787701699999999999967994999999837656588899999999999710044981477652877999


Q ss_pred             EEEECCC
Q ss_conf             9920469
Q gi|254780320|r  130 ILSSKCV  136 (136)
Q Consensus       130 ~l~Pkkv  136 (136)
                      +|+|+|.
T Consensus        81 ~l~P~k~   87 (89)
T 1i96_V           81 LLAPVKV   87 (89)
T ss_pred             EEECCCC
T ss_conf             9913776