HHSEARCH alignment of GI: 254780320 and SCOP domain: d1i96v_

Alignment

Probab=99.97  E-value=7.9e-31  Score=202.10  Aligned_cols=86  Identities=38%  Similarity=0.713  Sum_probs=84.8

Q ss_pred             CCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf             20026897400867999999999999603791999999709743573568999999999842243203677324876999
Q gi|254780320|r   50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM  129 (136)
Q Consensus        50 ~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~~pk~~Gr~~~~  129 (136)
                      ++|||+|+|+||+|||++|+++|++||++||+|+|+|+|||||++|+|.|.++|++|+++|+++|++|++|+++|++|+|
T Consensus         1 evKEIrl~~~I~~hDl~~K~k~a~~FL~~G~kVKv~v~frGRe~~~~e~g~~~l~~~~~~l~d~~~ve~~pk~~Gr~~~~   80 (86)
T d1i96v_           1 EVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNM   80 (86)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEE
T ss_conf             96149960687711699999999999850780899999836655587889999999999713031870376350888999


Q ss_pred             EEEECC
Q ss_conf             992046
Q gi|254780320|r  130 ILSSKC  135 (136)
Q Consensus       130 ~l~Pkk  135 (136)
                      +|+|+|
T Consensus        81 ~l~P~K   86 (86)
T d1i96v_          81 LLAPVK   86 (86)
T ss_pred             EEEECC
T ss_conf             996089

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: Translation initiation factor IF3, C-terminal domain
family: Translation initiation factor IF3, C-terminal domain
domain: Translation initiation factor IF3, C-terminal domain
species: Thermus thermophilus [TaxId: 274]