BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780320|ref|YP_003064733.1| translation initiation factor IF-3 [Candidatus Liberibacter asiaticus str. psy62] (136 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780320|ref|YP_003064733.1| translation initiation factor IF-3 [Candidatus Liberibacter asiaticus str. psy62] gi|254039997|gb|ACT56793.1| translation initiation factor IF-3 [Candidatus Liberibacter asiaticus str. psy62] Length = 136 Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI Sbjct: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP Sbjct: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 Query: 121 KFEGRQMIMILSSKCV 136 KFEGRQMIMILSSKCV Sbjct: 121 KFEGRQMIMILSSKCV 136 >gi|315122256|ref|YP_004062745.1| translation initiation factor IF-3 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495658|gb|ADR52257.1| translation initiation factor IF-3 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 161 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/134 (67%), Positives = 108/134 (80%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEANLDLVEIDSS P +CK+LDLRKL+YT+QKNA EARKKQKS KEVK+ P I Sbjct: 28 LKKAQEANLDLVEIDSSANPPICKMLDLRKLKYTMQKNAAEARKKQKSVDTKEVKLSPGI 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D +VKL++IDGFLR GCKVK+ V+FRGRE+M+ D G LL+ IK EISR+D EP Sbjct: 88 KSNDYEVKLRSIDGFLRGGCKVKVYVRFRGREMMYPDQGYNLLTKIKNHVSEISRVDYEP 147 Query: 121 KFEGRQMIMILSSK 134 KFEGRQMIMILS K Sbjct: 148 KFEGRQMIMILSPK 161 >gi|222147168|ref|YP_002548125.1| translation initiation factor IF-3 [Agrobacterium vitis S4] gi|221734158|gb|ACM35121.1| translation initiation factor IF-3 [Agrobacterium vitis S4] Length = 151 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 18 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K++ F DG KVK+++KFRGRE+ HQ+LG +LL +KE E+++++ EP Sbjct: 78 DTHDYEVKMKSMSRFFEDGDKVKVTLKFRGREMAHQELGMKLLMQVKEDTVEVAKVEAEP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 KLEGRQMMMVLAPK 151 >gi|319404957|emb|CBI78559.1| translation initiation factor IF-3 [Bartonella sp. AR 15-3] Length = 164 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 103/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA +A LDLVEI + P VCKI+DL KL+Y QK A E RKKQK+ IKE+KMRP + Sbjct: 31 LSMAADAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKTIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|190889925|ref|YP_001976467.1| translation initiation factor IF-3 protein [Rhizobium etli CIAT 652] gi|190695204|gb|ACE89289.1| translation initiation factor IF-3 protein [Rhizobium etli CIAT 652] Length = 168 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 35 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EP Sbjct: 95 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEP 154 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 155 KLEGRQMMMVLAPK 168 >gi|86355918|ref|YP_467810.1| translation initiation factor IF-3 [Rhizobium etli CFN 42] gi|86280020|gb|ABC89083.1| translation initiation factor IF-3 protein [Rhizobium etli CFN 42] Length = 168 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 35 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EP Sbjct: 95 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEP 154 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 155 KLEGRQMMMVLAPK 168 >gi|20532093|sp|Q92ST3|IF3_RHIME RecName: Full=Translation initiation factor IF-3 Length = 177 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 44 LRMADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EP Sbjct: 104 DTHDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEP 163 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 164 KLEGRQMMMVLAPK 177 >gi|15887604|ref|NP_353285.1| translation initiation factor IF-3 [Agrobacterium tumefaciens str. C58] gi|15155147|gb|AAK86070.1| translation initiation factor 3 [Agrobacterium tumefaciens str. C58] Length = 140 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 75/134 (55%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y+ QK A EARKKQK +KE+KMRP I Sbjct: 7 LKMAEEAGLDLVEISPNAEPPVCKILDLGKLKYSTQKKAAEARKKQKIVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +KE I++++ EP Sbjct: 67 DTHDYDVKMKAMNRFFDEGDKVKVTLKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 127 KLEGRQMMMVLAPR 140 >gi|222084528|ref|YP_002543057.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84] gi|221721976|gb|ACM25132.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84] Length = 183 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 50 LRMAEEAGLDLVEISPNAEAPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KAI F +G KVK+++KFRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 110 DTHDYEVKMKAIGRFFEEGDKVKVTLKFRGREMAHQELGMKLLQQVKEDTVEIAKVEAEP 169 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 170 KLEGRQMMMVLAPK 183 >gi|209551835|ref|YP_002283752.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238054433|sp|B5ZXR7|IF3_RHILW RecName: Full=Translation initiation factor IF-3 gi|209537591|gb|ACI57526.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 178 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 45 LRMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 105 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEFAKVEAEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 165 KLEGRQMMMVLAPK 178 >gi|319403531|emb|CBI77112.1| translation initiation factor IF-3 [Bartonella rochalimae ATCC BAA-1498] Length = 164 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 78/134 (58%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 31 LSMAAEAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|325291690|ref|YP_004277554.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3] gi|325059543|gb|ADY63234.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3] Length = 140 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 75/134 (55%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VCKILDL KL+Y+ QK A EARKKQK +KE+KMRP I Sbjct: 7 LKMAEDAGLDLVEISPNAEPPVCKILDLGKLKYSTQKKAAEARKKQKIVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +KE I++++ EP Sbjct: 67 DTHDYDVKMKAMNRFFDEGDKVKVTLKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 127 KLEGRQMMMVLAPK 140 >gi|15964035|ref|NP_384388.1| translation initiation factor IF-3 [Sinorhizobium meliloti 1021] gi|307301181|ref|ZP_07580943.1| translation initiation factor IF-3 [Sinorhizobium meliloti BL225C] gi|307321082|ref|ZP_07600487.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83] gi|15073211|emb|CAC41719.1| Probable translation initiation factor IF-3 protein [Sinorhizobium meliloti 1021] gi|306893254|gb|EFN24035.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83] gi|306903637|gb|EFN34224.1| translation initiation factor IF-3 [Sinorhizobium meliloti BL225C] Length = 143 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 10 LRMADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EP Sbjct: 70 DTHDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEP 129 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 130 KLEGRQMMMVLAPK 143 >gi|17988293|ref|NP_540927.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|23502965|ref|NP_699092.1| translation initiation factor IF-3 [Brucella suis 1330] gi|82700868|ref|YP_415442.1| translation initiation factor IF-3 [Brucella melitensis biovar Abortus 2308] gi|148559884|ref|YP_001259916.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840] gi|161620028|ref|YP_001593915.1| translation initiation factor IF-3 [Brucella canis ATCC 23365] gi|163844133|ref|YP_001628537.1| translation initiation factor IF-3 [Brucella suis ATCC 23445] gi|225626490|ref|ZP_03784529.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo] gi|225853544|ref|YP_002733777.1| translation initiation factor IF-3 [Brucella melitensis ATCC 23457] gi|237816462|ref|ZP_04595455.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A] gi|254690252|ref|ZP_05153506.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|254694739|ref|ZP_05156567.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|254696368|ref|ZP_05158196.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|254700749|ref|ZP_05162577.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|254705121|ref|ZP_05166949.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|254707363|ref|ZP_05169191.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|254709094|ref|ZP_05170905.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|254713480|ref|ZP_05175291.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|254716164|ref|ZP_05177975.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|254718160|ref|ZP_05179971.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|254731282|ref|ZP_05189860.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|256045722|ref|ZP_05448600.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|256060081|ref|ZP_05450263.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|256112443|ref|ZP_05453364.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|256158618|ref|ZP_05456505.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|256254026|ref|ZP_05459562.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|256258505|ref|ZP_05464041.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|256370515|ref|YP_003108026.1| translation initiation factor IF-3 [Brucella microti CCM 4915] gi|260169524|ref|ZP_05756335.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|17984064|gb|AAL53191.1| bacterial protein translation initiation factor 3 ( if-3) [Brucella melitensis bv. 1 str. 16M] gi|23349002|gb|AAN31007.1| translation initiation factor IF-3 [Brucella suis 1330] gi|82616969|emb|CAJ12077.1| Initiation factor 3 [Brucella melitensis biovar Abortus 2308] gi|148371141|gb|ABQ61120.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840] gi|161336839|gb|ABX63144.1| Translation initiation factor IF-3 [Brucella canis ATCC 23365] gi|163674856|gb|ABY38967.1| Translation initiation factor IF-3 [Brucella suis ATCC 23445] gi|225618147|gb|EEH15190.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo] gi|225641909|gb|ACO01823.1| Translation initiation factor IF-3 [Brucella melitensis ATCC 23457] gi|237788529|gb|EEP62744.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A] gi|256000678|gb|ACU49077.1| translation initiation factor IF-3 [Brucella microti CCM 4915] gi|326539834|gb|ADZ88049.1| translation initiation factor IF-3 [Brucella melitensis M5-90] Length = 134 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 1 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 61 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 121 KLEGRQMMMVLAPR 134 >gi|260546221|ref|ZP_05821961.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038] gi|260563021|ref|ZP_05833507.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|260567412|ref|ZP_05837882.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40] gi|260755791|ref|ZP_05868139.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|260759014|ref|ZP_05871362.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|260760739|ref|ZP_05873082.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|260884815|ref|ZP_05896429.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|261215066|ref|ZP_05929347.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|261217936|ref|ZP_05932217.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|261221165|ref|ZP_05935446.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|261314848|ref|ZP_05954045.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|261316593|ref|ZP_05955790.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|261321214|ref|ZP_05960411.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|261324056|ref|ZP_05963253.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|261751258|ref|ZP_05994967.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|261755823|ref|ZP_05999532.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|261759051|ref|ZP_06002760.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|265983114|ref|ZP_06095849.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|265992140|ref|ZP_06104697.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|265993878|ref|ZP_06106435.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|265997125|ref|ZP_06109682.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|265999247|ref|ZP_06111613.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str. 63/9] gi|294851343|ref|ZP_06792016.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026] gi|297247343|ref|ZP_06931061.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str. B3196] gi|260096328|gb|EEW80204.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038] gi|260153037|gb|EEW88129.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|260156930|gb|EEW92010.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40] gi|260669332|gb|EEX56272.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|260671171|gb|EEX57992.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|260675899|gb|EEX62720.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|260874343|gb|EEX81412.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|260916673|gb|EEX83534.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|260919749|gb|EEX86402.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|260923025|gb|EEX89593.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|261293904|gb|EEX97400.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|261295816|gb|EEX99312.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|261300036|gb|EEY03533.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|261303874|gb|EEY07371.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|261739035|gb|EEY27031.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|261741011|gb|EEY28937.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|261745576|gb|EEY33502.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|262551593|gb|EEZ07583.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|262764859|gb|EEZ10780.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|263003206|gb|EEZ15499.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|263092845|gb|EEZ17020.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str. 63/9] gi|264661706|gb|EEZ31967.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|294819932|gb|EFG36931.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026] gi|297174512|gb|EFH33859.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str. B3196] Length = 196 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 63 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 123 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 182 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 183 KLEGRQMMMVLAPR 196 >gi|150398669|ref|YP_001329136.1| translation initiation factor IF-3 [Sinorhizobium medicae WSM419] gi|150030184|gb|ABR62301.1| initiation factor 3 [Sinorhizobium medicae WSM419] Length = 132 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 77/132 (58%), Positives = 100/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP ID Sbjct: 1 MADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EPK Sbjct: 61 HDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKL 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 121 EGRQMMMVLAPK 132 >gi|62290957|ref|YP_222750.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str. 9-941] gi|61226333|sp|P0A3K8|IF3_BRUME RecName: Full=Translation initiation factor IF-3 gi|61226334|sp|P0A3K9|IF3_BRUSU RecName: Full=Translation initiation factor IF-3 gi|61226336|sp|P0A3L0|IF3_BRUAB RecName: Full=Translation initiation factor IF-3 gi|7105706|gb|AAF05835.2|AF196569_1 translation initiation factor 3 [Brucella abortus] gi|62197089|gb|AAX75389.1| InfC, translation initiation factor IF-3 [Brucella abortus bv. 1 str. 9-941] Length = 178 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 45 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 105 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 165 KLEGRQMMMVLAPR 178 >gi|227824121|ref|YP_002828094.1| translation initiation factor IF-3 [Sinorhizobium fredii NGR234] gi|227343123|gb|ACP27341.1| predicted translation initiation factor IF-3 [Sinorhizobium fredii NGR234] Length = 143 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E+ LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 10 LRMAEESGLDLVEIAPNSEPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F DG KVK+++KFRGRE+ HQ+LG +LL +K+ I++++ EP Sbjct: 70 DTHDYEVKMKAMNRFFEDGDKVKVTLKFRGREMAHQELGMKLLLQVKDDTQAIAKVEAEP 129 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 130 KLEGRQMMMVLAPK 143 >gi|241207213|ref|YP_002978309.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861103|gb|ACS58770.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 204 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 71 LKMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 130 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 131 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEP 190 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 191 KLEGRQMMMVLAPK 204 >gi|256030619|ref|ZP_05444233.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] Length = 134 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/134 (55%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQ++ IKE+KMRP I Sbjct: 1 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQRTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 61 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 121 KLEGRQMMMVLAPR 134 >gi|319406445|emb|CBI80085.1| translation initiation factor IF-3 [Bartonella sp. 1-1C] Length = 164 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA +A LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 31 LSMAADAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|265987665|ref|ZP_06100222.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] gi|264659862|gb|EEZ30123.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] Length = 196 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/134 (55%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQ++ IKE+KMRP I Sbjct: 63 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQRTVEIKEIKMRPNI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 123 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 182 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 183 KLEGRQMMMVLAPR 196 >gi|90420462|ref|ZP_01228369.1| translation initiation factor IF-3 [Aurantimonas manganoxydans SI85-9A1] gi|90335190|gb|EAS48943.1| translation initiation factor IF-3 [Aurantimonas manganoxydans SI85-9A1] Length = 189 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VCKILDL KL+Y QK + EAR++QK+ +KE+KMRP I Sbjct: 55 LAMAEEAGLDLVEIVPTANPPVCKILDLGKLKYETQKKSAEARRRQKTIEVKEIKMRPNI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K++ F +G KVK++++FRGRE+ HQ+LG LL+ ++E GEI++++ EP Sbjct: 115 DEHDYETKMKSVRRFFDEGDKVKVTLRFRGREMAHQELGMRLLNRVREETGEIAKVEAEP 174 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 175 KLEGRQMMMVLAPR 188 >gi|49473727|ref|YP_031769.1| translation initiation factor IF-3 [Bartonella quintana str. Toulouse] gi|61213108|sp|Q6G1I3|IF3_BARQU RecName: Full=Translation initiation factor IF-3 gi|49239230|emb|CAF25550.1| Translation initiation factor IF-3 [Bartonella quintana str. Toulouse] Length = 172 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 39 LAMAAEVGLDLVEIVPNTEPPVCKIIDLGKLKYQTQKKAAEIRKKQKVIEIKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYEVKLKAIHRFIGNGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIEAEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|116250034|ref|YP_765872.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. viciae 3841] gi|115254682|emb|CAK05756.1| putative translation initiation factor [Rhizobium leguminosarum bv. viciae 3841] Length = 195 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 62 LRMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 122 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEP 181 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 182 KLEGRQMMMVLAPK 195 >gi|239833158|ref|ZP_04681487.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG 3301] gi|239825425|gb|EEQ96993.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG 3301] gi|326410116|gb|ADZ67181.1| translation initiation factor IF-3 [Brucella melitensis M28] Length = 132 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/132 (56%), Positives = 100/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP ID Sbjct: 1 MAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EPK Sbjct: 61 HDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKL 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 121 EGRQMMMVLAPR 132 >gi|49474873|ref|YP_032914.1| translation initiation factor IF-3 [Bartonella henselae str. Houston-1] gi|61213111|sp|Q6G570|IF3_BARHE RecName: Full=Translation initiation factor IF-3 gi|49237678|emb|CAF26865.1| Translation initiation factor IF-3 [Bartonella henselae str. Houston-1] Length = 172 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 39 LAMAAEVGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKVIEIKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIGNGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M++++K Sbjct: 159 KLEGRQMMMVIAAK 172 >gi|114707132|ref|ZP_01440030.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506] gi|114537328|gb|EAU40454.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506] Length = 217 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 73/135 (54%), Positives = 101/135 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++A LDLVEI + P VCKILDL KL+Y QK A EARK+QK+ +KEVKMRP I Sbjct: 83 LTLAEDAGLDLVEIVPNANPPVCKILDLGKLKYENQKKAAEARKRQKTIEVKEVKMRPNI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+KA+ F DG KVK++++FRGRE+ HQ+LG LL+ ++E EIS+++ EP Sbjct: 143 DDHDYETKMKAVRRFFDDGDKVKVTLRFRGREMAHQELGMRLLNRVREETNEISKVEAEP 202 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ + Sbjct: 203 KLEGRQMMMVLAPRS 217 >gi|319407917|emb|CBI81571.1| translation initiation factor IF-3 [Bartonella schoenbuchensis R1] Length = 172 Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 74/134 (55%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLVEI + P VCKI+DL KL+Y QK A E RKKQK+ +KE+KMRP + Sbjct: 39 LAMAADVGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKTIEVKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKA+ F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYEVKLKAVHRFIDHGNKVKITLRFRGREMAHQDLGMKLLQRVKEDTSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|163867351|ref|YP_001608545.1| translation initiation factor IF-3 [Bartonella tribocorum CIP 105476] gi|189028351|sp|A9ILC8|IF3_BART1 RecName: Full=Translation initiation factor IF-3 gi|161016992|emb|CAK00550.1| translation initiation factor IF-3 [Bartonella tribocorum CIP 105476] Length = 172 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 77/134 (57%), Positives = 99/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+K+RP + Sbjct: 39 LAMAAEAGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKVIEIKEIKVRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIDHGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIELEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|153008139|ref|YP_001369354.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC 49188] gi|166198960|sp|A6WX21|IF3_OCHA4 RecName: Full=Translation initiation factor IF-3 gi|151560027|gb|ABS13525.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC 49188] Length = 178 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 75/132 (56%), Positives = 100/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP ID Sbjct: 47 MAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNIDT 106 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EPK Sbjct: 107 HDYEVKMKAALRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKL 166 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 167 EGRQMMMVLAPR 178 >gi|83944920|ref|ZP_00957286.1| translation initiation factor [Oceanicaulis alexandrii HTCC2633] gi|83851702|gb|EAP89557.1| translation initiation factor [Oceanicaulis alexandrii HTCC2633] Length = 140 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCKI+D KL+Y QK EARKKQK+ +KE+KMRP I Sbjct: 7 LEAAAEVGLDLVEVSPNANPPVCKIVDYGKLKYQEQKKKAEARKKQKTQDVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD QVK KA+ F DG KVK++++FRGRE+ HQ+ G +++ +KE F E+++++ EP Sbjct: 67 DIHDYQVKTKAMTRFFEDGDKVKVTLRFRGREMAHQERGMDVMKRVKEDFSEVAKVELEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+++ + Sbjct: 127 KLEGRQMIMVMAPR 140 >gi|304393066|ref|ZP_07374995.1| translation initiation factor IF-3 [Ahrensia sp. R2A130] gi|303294831|gb|EFL89202.1| translation initiation factor IF-3 [Ahrensia sp. R2A130] Length = 151 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P +CKILD K +Y QK A EARKKQK+ +KE+KMRP I Sbjct: 18 LEMARDAGLDLVEISPTNRPPICKILDFGKYKYAAQKKAAEARKKQKTVEVKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ F +G KVK++++FRGRE+ H +LG +LL +KE EI++++ EP Sbjct: 78 DTHDYEVKMRSVFRFFEEGDKVKVTLRFRGREMAHMNLGMDLLKKVKEDTDEIAKVEAEP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 138 KLEGRQMMMVLAPR 151 >gi|319898238|ref|YP_004158331.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73] gi|319402202|emb|CBI75733.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73] Length = 164 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 74/131 (56%), Positives = 99/131 (75%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP +D+H Sbjct: 34 AADIGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNVDVH 93 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D +VKL+AI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EPKFE Sbjct: 94 DYEVKLRAIRRFIDNGDKVKITLRFRGREMTHQDLGIKLLQRVKENTNEIAKIESEPKFE 153 Query: 124 GRQMIMILSSK 134 GRQ++M+++ K Sbjct: 154 GRQIMMVIAPK 164 >gi|307942620|ref|ZP_07657968.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4] gi|307774259|gb|EFO33472.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4] Length = 154 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 95/133 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A A LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP I Sbjct: 20 MDIAMGAGLDLVEIQPNAQPPVCKILDYGRYKYQAQKKAAEARKKQKTVEIKEIKMRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K + F DG KVK++++FRGRE+ HQDLG +LL ++E EI++++ P Sbjct: 80 DTHDYEVKMKNMLRFFNDGDKVKVTLRFRGREMAHQDLGVKLLHKVREETAEIAKVESNP 139 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 140 KLEGRQMVMVLAP 152 >gi|254500562|ref|ZP_05112713.1| translation initiation factor IF-3, C-terminal domain, putative [Labrenzia alexandrii DFL-11] gi|222436633|gb|EEE43312.1| translation initiation factor IF-3, C-terminal domain, putative [Labrenzia alexandrii DFL-11] Length = 135 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 70/133 (52%), Positives = 96/133 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A +A LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP I Sbjct: 1 MGIAMDAGLDLVEIQPNANPPVCKILDYGRYKYQAQKKAAEARKKQKTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K + F DG KVK++++FRGRE+ HQDLG +LL +++ EI++++ P Sbjct: 61 DTHDYEVKMKNMLRFFNDGDKVKVTLRFRGREMAHQDLGMKLLHKVRDETSEIAKVESHP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 121 KLEGRQMVMVLAP 133 >gi|163757701|ref|ZP_02164790.1| translation initiation factor IF-3 protein [Hoeflea phototrophica DFL-43] gi|162285203|gb|EDQ35485.1| translation initiation factor IF-3 protein [Hoeflea phototrophica DFL-43] Length = 140 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 72/134 (53%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI+S+ VCKI+DL KL+Y QK A EARKKQK+ +KE+KMRP I Sbjct: 7 LAMAEEAGLDLVEINSNGDVPVCKIVDLGKLKYQSQKKASEARKKQKTVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A++ F +G KVK++++FRGRE+ H +LG +LL +K+ EI++++ EP Sbjct: 67 DTHDYDVKMRAMNRFFDEGDKVKVTLRFRGREMAHMELGMKLLQKVKDDTVEIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 127 KLEGRQMMMVLAPK 140 >gi|260463242|ref|ZP_05811444.1| translation initiation factor IF-3 [Mesorhizobium opportunistum WSM2075] gi|259031092|gb|EEW32366.1| translation initiation factor IF-3 [Mesorhizobium opportunistum WSM2075] Length = 134 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP I Sbjct: 1 MLLAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EP Sbjct: 61 DSHDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 121 KLEGRQMMMVLAPR 134 >gi|170742360|ref|YP_001771015.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46] gi|259491510|sp|B0UP34|IF3_METS4 RecName: Full=Translation initiation factor IF-3 gi|168196634|gb|ACA18581.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46] Length = 173 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EA LDLVEI + TP VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LQVAEEAGLDLVEIAPNSTPPVCKLLDYGRYRFNEQKKQAEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGRE+ HQDLG LL +K EI++++ EP Sbjct: 100 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREMAHQDLGLRLLERVKAETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIMIL+ + Sbjct: 160 QLEGRQMIMILAPR 173 >gi|154245880|ref|YP_001416838.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2] gi|238686715|sp|A7IGN8|IF3_XANP2 RecName: Full=Translation initiation factor IF-3 gi|154159965|gb|ABS67181.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2] Length = 174 Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA LDLVEI + P VCKILD + +Y QK A EARKKQK +KE+K+RP I Sbjct: 41 LTLAQEAGLDLVEISPNSAPPVCKILDYGRFKYQNQKKASEARKKQKVVEVKEIKLRPGI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+++++ F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP Sbjct: 101 DTHDYEVKMRSMERFFEEGDKVKVTLRFRGREMAHQDIGFKLLQKLKEDVAAIAKVEAEP 160 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMILS + Sbjct: 161 MLEGRQMIMILSPR 174 >gi|118593811|ref|ZP_01551177.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614] gi|118433606|gb|EAV40271.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614] Length = 152 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 96/133 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A +A LDLVEI + P VCKILD + +Y QK A E RKKQK+ IKE+KMRP I Sbjct: 18 MGIAMDAGLDLVEIQPNANPPVCKILDYGRYKYQAQKKAAETRKKQKTVEIKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K++ F +G KVK++++FRGRE+ HQDLG LL+ ++E EI++++ P Sbjct: 78 DTHDYEVKMKSMLRFFGEGDKVKVTLRFRGREMAHQDLGMNLLNKVREETNEIAKVESAP 137 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 138 KLEGRQMVMVLAP 150 >gi|319780189|ref|YP_004139665.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166077|gb|ADV09615.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 178 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 96/132 (72%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP ID Sbjct: 47 LAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNIDS 106 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EPK Sbjct: 107 HDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKL 166 Query: 123 EGRQMIMILSSK 134 EGRQM+M+LS + Sbjct: 167 EGRQMMMVLSPR 178 >gi|154250663|ref|YP_001411487.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans DS-1] gi|171769438|sp|A7HPJ7|IF3_PARL1 RecName: Full=Translation initiation factor IF-3 gi|154154613|gb|ABS61830.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans DS-1] Length = 173 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 69/134 (51%), Positives = 99/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVE+ + P VCK+LD K +Y QK A EARKKQK+ +KE+KMRP I Sbjct: 40 IRMAEEAGLDLVEVSPNAKPPVCKLLDYGKFKYQAQKKANEARKKQKTVEVKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++A+ F +G KVK++++FRGRE+ HQ+LG LL+ +KE I++++ P Sbjct: 100 DTHDYEVKMRAMLRFFEEGDKVKVTLRFRGREMAHQELGMVLLNKVKEEVEPIAKVELYP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 160 RLEGRQMIMVLAPK 173 >gi|110633028|ref|YP_673236.1| translation initiation factor IF-3 [Mesorhizobium sp. BNC1] gi|110284012|gb|ABG62071.1| bacterial translation initiation factor 3 (bIF-3) [Chelativorans sp. BNC1] Length = 192 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 69/134 (51%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P VCKI DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 59 LRIAEEAGLDLVEVSPNADPPVCKITDLGKLKYQSQKKAAEARKKQKTIEIKEIKMRPNI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VK++++ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EP Sbjct: 119 DIHDYEVKMRSVRRFFEEGDKVKLTLRFRGREMAHLELGMKLLNRVREDVEGIAKVEAEP 178 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 179 KLEGRQMMMVLAPK 192 >gi|85702892|ref|ZP_01033996.1| translation initiation factor [Roseovarius sp. 217] gi|85671820|gb|EAQ26677.1| translation initiation factor [Roseovarius sp. 217] Length = 219 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI S TP VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 84 LEMAEEAGLDLVEISPSATPPVCKIMDFGKYKYEQQKREAEARKKQKVIEVKEIKFRPGT 143 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL+ G KVKI+++FRGRE+ HQDLGR+LL I E ++ RI+ P Sbjct: 144 DTHDYDVKMRSVVKFLQGGDKVKITLRFRGREMAHQDLGRQLLERIAEDIKDVGRIENMP 203 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 204 KMEGRQMIMVIGP 216 >gi|158426068|ref|YP_001527360.1| translation initiation factor IF-3 [Azorhizobium caulinodans ORS 571] gi|172047848|sp|A8HWL0|IF3_AZOC5 RecName: Full=Translation initiation factor IF-3 gi|158332957|dbj|BAF90442.1| translation initiation factor 3 [Azorhizobium caulinodans ORS 571] Length = 174 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 71/132 (53%), Positives = 96/132 (72%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +AQEA LDLVEI + +P VCKILD + +Y QK A EARKKQK +KE+K+RP ID Sbjct: 43 LAQEAGLDLVEISPNSSPPVCKILDFGRFKYQNQKKASEARKKQKVVEVKEIKLRPGIDT 102 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+KA+ F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP Sbjct: 103 HDYDVKMKAMLRFFEEGDKVKVTLRFRGREMAHQDIGYKLLQKLKEDVTNIAKVEAEPML 162 Query: 123 EGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 163 EGRQMIMILAPR 174 >gi|13474222|ref|NP_105790.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099] gi|20138505|sp|Q98CP5|IF3_RHILO RecName: Full=Translation initiation factor IF-3 gi|14024974|dbj|BAB51576.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099] Length = 178 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 69/132 (52%), Positives = 96/132 (72%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP ID Sbjct: 47 LAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNIDS 106 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EPK Sbjct: 107 HDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKL 166 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 167 EGRQMMMVLAPR 178 >gi|39933120|ref|NP_945396.1| translation initiation factor IF-3 [Rhodopseudomonas palustris CGA009] gi|192288474|ref|YP_001989079.1| translation initiation factor IF-3 [Rhodopseudomonas palustris TIE-1] gi|39652745|emb|CAE25484.1| translation initiation factor IF-3 [Rhodopseudomonas palustris CGA009] gi|192282223|gb|ACE98603.1| translation initiation factor IF-3 [Rhodopseudomonas palustris TIE-1] Length = 192 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 59 IKMAMDAGMDLVEISPTSSPPVCKIMDYGKYKYSAQKKAAEARKKQKIVEIKEIKLRPMI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ +P Sbjct: 119 DDHDYEVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDP 178 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 179 RFEGRQVVMVLAPR 192 >gi|163737358|ref|ZP_02144775.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis BS107] gi|161388884|gb|EDQ13236.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis BS107] Length = 144 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQMAEEAGLDLVEISPNATPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 68 DTHDYEVKMRNVYKFLENGDKVKITLRFRGREMAHQNLGRELLLRVAEDIKELGKVENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 128 KMEGRQMIMMIGP 140 >gi|182679072|ref|YP_001833218.1| translation initiation factor IF-3 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634955|gb|ACB95729.1| translation initiation factor IF-3 [Beijerinckia indica subsp. indica ATCC 9039] Length = 219 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/134 (52%), Positives = 94/134 (70%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVEI + TP VCKILD K R+ QK A EARKKQK IKE+K+RP ID Sbjct: 86 RLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQKKAAEARKKQKIVEIKEIKLRPGID 145 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+KA+ F +G KVK++++FRGRE+ HQDLG LL +K G ++++ EP Sbjct: 146 EHDYDTKMKAVKRFFEEGDKVKVTLRFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPS 205 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ + Sbjct: 206 MEGRQMIMVLAPRT 219 >gi|163740975|ref|ZP_02148368.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10] gi|161385966|gb|EDQ10342.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10] Length = 137 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNATPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DTHDYEVKMRNVYKFLENGDKVKITLRFRGREMAHQNLGRELLLRVAEDIKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|121601938|ref|YP_989588.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583] gi|166198949|sp|A1UUD5|IF3_BARBK RecName: Full=Translation initiation factor IF-3 gi|120614115|gb|ABM44716.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583] Length = 173 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 96/135 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+K+RP + Sbjct: 39 LAMAANIGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAETRKKQKIIEIKEIKLRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIEHGNKVKITLRFRGREMAHQDLGVKLLERMKEDVSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSKC 135 K E RQM+M+++ K Sbjct: 159 KLENRQMMMVIAPKS 173 >gi|159043698|ref|YP_001532492.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12] gi|157911458|gb|ABV92891.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12] Length = 202 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 70/133 (52%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 67 MRMAEEAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKTIDVKEVKFRPNT 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QVK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 127 DTHDYQVKMRNVFKFLEGGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEIGKVENMP 186 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 187 KMEGRQMVMMIGP 199 >gi|27375821|ref|NP_767350.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA 110] gi|39931279|sp|Q89WH7|IF3_BRAJA RecName: Full=Translation initiation factor IF-3 gi|27348959|dbj|BAC45975.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA 110] Length = 179 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA +DLVEI + +P VCKI+D K +Y+ QK A EARK+QK+ IKE+K+RP+I Sbjct: 46 IKMAQEAGMDLVEISPNTSPPVCKIMDYGKYKYSAQKKAAEARKRQKTVEIKEIKLRPMI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL IK E+++++ + Sbjct: 106 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDA 165 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 166 RFEGRQVVMVLAPR 179 >gi|259416882|ref|ZP_05740802.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B] gi|259348321|gb|EEW60098.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B] Length = 143 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 7 MQMAEEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 67 DTHDYDVKMRNVIKFLENGDKVKVTLRFRGREMAHQNLGRELLQRVAEDIKELGKVENMP 126 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 127 KMEGRQMIMMIGP 139 >gi|86747192|ref|YP_483688.1| translation initiation factor IF-3 [Rhodopseudomonas palustris HaA2] gi|86570220|gb|ABD04777.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris HaA2] Length = 145 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 67/134 (50%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI +V+P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 12 IKMAMEAGMDLVEISPNVSPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMI 71 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + Sbjct: 72 DDHDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDA 131 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 132 RFEGRQVVMVLAPR 145 >gi|323137355|ref|ZP_08072433.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242] gi|322397342|gb|EFX99865.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242] Length = 175 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA A LDLVEI + TP VCKILD + R+ QK A EARKKQK +KE+K+RP I Sbjct: 42 LAMADSAGLDLVEIAPNSTPPVCKILDYGRFRFAEQKKAAEARKKQKVVEVKEIKLRPGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGREI HQD+G LL+ +K +++++ EP Sbjct: 102 DEHDYDVKMKAVRRFFEEGDKVKVTLRFRGREIAHQDIGYRLLTRVKAETANLAKVELEP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 162 SMEGRQMVMVLAPR 175 >gi|298293871|ref|YP_003695810.1| translation initiation factor IF-3 [Starkeya novella DSM 506] gi|296930382|gb|ADH91191.1| translation initiation factor IF-3 [Starkeya novella DSM 506] Length = 174 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 94/132 (71%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ+A LDLVEI + P VCKILD + +Y QK A EARKKQ IKE+K+RP ID Sbjct: 43 MAQDAGLDLVEIAPNSVPPVCKILDYGRFKYQNQKKANEARKKQHVVEIKEIKLRPGIDT 102 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+KAI F +G KVK++++FRGRE+ HQ+LG +LL+ +KE I++++ EP Sbjct: 103 HDYDVKMKAIHRFFDEGDKVKVTLRFRGREMAHQELGYKLLNKVKEELATIAKVESEPSL 162 Query: 123 EGRQMIMILSSK 134 EGRQM M+L+ + Sbjct: 163 EGRQMTMVLAPR 174 >gi|99081604|ref|YP_613758.1| translation initiation factor 3 [Ruegeria sp. TM1040] gi|99037884|gb|ABF64496.1| bacterial translation initiation factor 3 (bIF-3) [Ruegeria sp. TM1040] Length = 137 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DTHDYDVKMRNVIKFLENGDKVKVTLRFRGREMAHQNLGRELLQRVAEDIKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|328541818|ref|YP_004301927.1| translation initiation factor IF-3 [polymorphum gilvum SL003B-26A1] gi|326411570|gb|ADZ68633.1| Predicted translation initiation factor IF-3 [Polymorphum gilvum SL003B-26A1] Length = 132 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 67/128 (52%), Positives = 95/128 (74%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EA LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP ID+HD Sbjct: 2 EAGLDLVEIQPNAEPPVCKILDYGRFKYQSQKKAAEARKKQKTVEIKEIKMRPNIDIHDY 61 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +VK+K++ F +G KVK++++FRGRE+ HQDLG +LL +++ EI++++ P+ EGR Sbjct: 62 EVKMKSMLRFFSEGDKVKVTLRFRGREMAHQDLGMKLLMKVRDETAEIAKVESAPRLEGR 121 Query: 126 QMIMILSS 133 QM+M+L+ Sbjct: 122 QMVMVLAP 129 >gi|46203017|ref|ZP_00052215.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 173 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/134 (51%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEAGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 100 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|91974650|ref|YP_567309.1| translation initiation factor IF-3 [Rhodopseudomonas palustris BisB5] gi|91681106|gb|ABE37408.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisB5] Length = 132 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 67/132 (50%), Positives = 99/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI +V+P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+ID Sbjct: 1 MAMEAGMDLVEISPNVSPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMIDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + +F Sbjct: 61 HDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDARF 120 Query: 123 EGRQMIMILSSK 134 EGRQ++M+L+ + Sbjct: 121 EGRQVVMVLAPR 132 >gi|84687222|ref|ZP_01015103.1| translation initiation factor [Maritimibacter alkaliphilus HTCC2654] gi|84664810|gb|EAQ11293.1| translation initiation factor [Rhodobacterales bacterium HTCC2654] Length = 164 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + TP VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 29 MELAEQAGLDLVEISPNATPPVCKIMDFGKFKYETQKREAEARKKQKTIEVKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VK+K + FL G KVK++++FRGRE+ HQ+LGR+LL + E EI +++ P Sbjct: 89 DVHDYDVKMKNVVKFLEKGDKVKVTLRFRGREMAHQNLGRDLLERVAEDVKEIGKVENMP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 149 KMEGRQMIMMIGP 161 >gi|149202824|ref|ZP_01879796.1| translation initiation factor IF-3 [Roseovarius sp. TM1035] gi|149144106|gb|EDM32140.1| translation initiation factor IF-3 [Roseovarius sp. TM1035] Length = 209 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI S TP VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 74 LEMAEEAGLDLVEISPSATPPVCKIMDFGKYKYEQQKREAEARKKQHIIEIKEIKFRPGT 133 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL+ G KVKI+++FRGRE+ HQDLGR+LL I + E+ R++ P Sbjct: 134 DTHDYDVKMRSVVKFLQGGDKVKITLRFRGREMAHQDLGRQLLERIADDIKEVGRVENMP 193 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 194 KMEGRQMIMVIGP 206 >gi|84515522|ref|ZP_01002884.1| translation initiation factor [Loktanella vestfoldensis SKA53] gi|84510805|gb|EAQ07260.1| translation initiation factor [Loktanella vestfoldensis SKA53] Length = 136 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 1 MQMAEEAGLDLVEISPNAVPPVCKIMDFGKFKYETQKKEAEARKKQKIIEIKEIKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVKI+++FRGRE+ HQ+LGR+LL + E E +++ P Sbjct: 61 DSHDYEVKMRSVFKFLENGDKVKITLRFRGREMAHQELGRQLLERVAEDTKETGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|329848409|ref|ZP_08263437.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19] gi|328843472|gb|EGF93041.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19] Length = 151 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ + P VCKILD K R+ QK EARKKQK IKE+K+RP I Sbjct: 18 LEAAEEAGLDLVEVSPTADPPVCKILDYGKFRFQEQKKKAEARKKQKVVEIKEIKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VK KA+ F +G KVK++++FRGRE+ H +LG +LL+ +K F ++++ EP Sbjct: 78 DIHDYEVKAKAMTRFFEEGDKVKVTLRFRGREMAHPELGMKLLNKVKADFEPTTKVEYEP 137 Query: 121 KFEGRQMIMILSSK 134 + EG+QMIMIL+ K Sbjct: 138 RMEGKQMIMILAPK 151 >gi|126729631|ref|ZP_01745444.1| translation initiation factor IF-3 [Sagittula stellata E-37] gi|126709750|gb|EBA08803.1| translation initiation factor IF-3 [Sagittula stellata E-37] Length = 137 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+ A LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MEMAERAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD QVK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + + EI +++ P Sbjct: 61 DIHDYQVKMRNVMKFLENGDKVKVTLRFRGREMAHQNLGRELLERVADDVKEIGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGP 133 >gi|254475440|ref|ZP_05088826.1| translation initiation factor IF-3 [Ruegeria sp. R11] gi|214029683|gb|EEB70518.1| translation initiation factor IF-3 [Ruegeria sp. R11] Length = 144 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 70/133 (52%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQLAEEAGLDLVEISPNANPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QVK+K + FL +G KVK++++FRGRE+ HQ+LGR+LL + E E+ +++ P Sbjct: 68 DTHDYQVKMKNVFKFLENGDKVKVTLRFRGREMAHQNLGRDLLLRVAEDIKELGKVENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 128 KMEGRQMIMMIAP 140 >gi|294677127|ref|YP_003577742.1| translation initiation factor IF [Rhodobacter capsulatus SB 1003] gi|294475947|gb|ADE85335.1| translation initiation factor IF-3 [Rhodobacter capsulatus SB 1003] Length = 141 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 8 MQMAEEAGLDLVEISPTAVPPVCKIMDFGKFKYEQQKKEAEARKKQKVIEIKEIKFRPGT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVK++++FRGRE+ HQ LG ELL+ + G+ +++ P Sbjct: 68 DTHDYEVKMRSVMKFLEEGDKVKVTLRFRGREMAHQQLGMELLNRVVGDVGDAGKVESMP 127 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 128 KLEGRQMVMMIAPK 141 >gi|220924608|ref|YP_002499910.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS 2060] gi|219949215|gb|ACL59607.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS 2060] Length = 176 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVEI + +P VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 43 LQLAEEVGLDLVEIAPNSSPPVCKLLDYGRYRFNEQKKQAEARKRQKTVEVKEIKLRPGI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGRE+ HQDLG LL +K ++++++ EP Sbjct: 103 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREMAHQDLGLRLLERVKAETQDVAKVESEP 162 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIMIL+ + Sbjct: 163 QLEGRQMIMILAPR 176 >gi|115522528|ref|YP_779439.1| translation initiation factor IF-3 [Rhodopseudomonas palustris BisA53] gi|115516475|gb|ABJ04459.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisA53] Length = 151 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 18 IKMAAEAGLDLVEISPNTAPPVCKIMDYGKFKYSAQKKAAEARKKQKVVEIKEIKLRPMI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQD+G +LL +K E ++++ + Sbjct: 78 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQDIGIKLLEKVKTDVAEFAKVEQDA 137 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 138 RFEGRQVVMVLAPR 151 >gi|163851051|ref|YP_001639094.1| translation initiation factor IF-3 [Methylobacterium extorquens PA1] gi|163662656|gb|ABY30023.1| translation initiation factor IF-3 [Methylobacterium extorquens PA1] Length = 176 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 43 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 103 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 162 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 163 MLEGRQMIMILAPR 176 >gi|218529881|ref|YP_002420697.1| translation initiation factor IF-3 [Methylobacterium chloromethanicum CM4] gi|240138185|ref|YP_002962657.1| Translation initiation factor IF-3 [Methylobacterium extorquens AM1] gi|254560745|ref|YP_003067840.1| translation initiation factor IF-3 [Methylobacterium extorquens DM4] gi|259491507|sp|B7KV98|IF3_METC4 RecName: Full=Translation initiation factor IF-3 gi|218522184|gb|ACK82769.1| translation initiation factor IF-3 [Methylobacterium chloromethanicum CM4] gi|240008154|gb|ACS39380.1| Translation initiation factor IF-3 [Methylobacterium extorquens AM1] gi|254268023|emb|CAX23894.1| Translation initiation factor IF-3 [Methylobacterium extorquens DM4] Length = 173 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/134 (50%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 100 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|217976828|ref|YP_002360975.1| translation initiation factor IF-3 [Methylocella silvestris BL2] gi|217502204|gb|ACK49613.1| translation initiation factor IF-3 [Methylocella silvestris BL2] Length = 175 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+EA LDLVEI + P VCKILD K R+ QK + EARKKQK IKE+K+RP I Sbjct: 42 LQSAEEAGLDLVEIVPTANPPVCKILDYGKFRFLEQKKSAEARKKQKIVEIKEIKLRPGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KA+ F +G KVK++++FRGRE+ HQDLG LL +K I++++ EP Sbjct: 102 DEHDYDTKMKAVRRFFEEGDKVKVTLRFRGREMAHQDLGFRLLERVKNETVTIAKVEAEP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 162 SMEGRQMVMVLAPK 175 >gi|260433905|ref|ZP_05787876.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis ITI-1157] gi|260417733|gb|EEX10992.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis ITI-1157] Length = 144 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 70/133 (52%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A +A LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQLAADAGLDLVEISPNANPPVCKIMDFGKYKYETQKREAEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +I+ P Sbjct: 68 DTHDYEVKMRNVVKFLEKGDKVKVTLRFRGREMAHQNLGRELLQRVAEDVKEIGKIENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 128 KMEGRQMIMMIGP 140 >gi|296446966|ref|ZP_06888901.1| translation initiation factor IF-3 [Methylosinus trichosporium OB3b] gi|296255533|gb|EFH02625.1| translation initiation factor IF-3 [Methylosinus trichosporium OB3b] Length = 175 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/131 (51%), Positives = 93/131 (70%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ A LDLVEI + P VCK+LD K R+ QK A EARKKQK +KE+K+RP ID H Sbjct: 45 AEAAGLDLVEIAPNSEPPVCKLLDYGKFRFLEQKKAAEARKKQKIVEVKEIKLRPGIDEH 104 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D +VK+KA+ F +G KVK++++FRGREI HQD+G L++ +K I++++ EP E Sbjct: 105 DYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGYRLMTRVKAETANIAKVELEPSME 164 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ + Sbjct: 165 GRQMIMVLAPR 175 >gi|254488522|ref|ZP_05101727.1| translation initiation factor IF-3 [Roseobacter sp. GAI101] gi|214045391|gb|EEB86029.1| translation initiation factor IF-3 [Roseobacter sp. GAI101] Length = 228 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA++A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 92 MEMAEDAGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 151 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++ + FL +G KVKI+++FRGRE+ HQ+LGR+LL + E E+ R++ P Sbjct: 152 DTNDYQVKMRNVFKFLDNGDKVKITLRFRGREMAHQNLGRQLLERVAEDTKEVGRVENFP 211 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 212 KMEGRQMVMLIGP 224 >gi|90421865|ref|YP_530235.1| initiation factor 3 [Rhodopseudomonas palustris BisB18] gi|90103879|gb|ABD85916.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisB18] Length = 132 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 97/132 (73%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+ID Sbjct: 1 MAAEAGMDLVEISPNTNPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMIDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K E ++++ + +F Sbjct: 61 HDYEVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKNDVAEYAKVEQDARF 120 Query: 123 EGRQMIMILSSK 134 EGRQ++M+L+ + Sbjct: 121 EGRQVVMVLAPR 132 >gi|218459867|ref|ZP_03499958.1| translation initiation factor IF-3 [Rhizobium etli Kim 5] Length = 122 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 90/122 (73%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 EI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP ID HD +VK+KA+ Sbjct: 1 EISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEVKMKAM 60 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EPK EGRQM+M+L+ Sbjct: 61 GRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEPKLEGRQMMMVLA 120 Query: 133 SK 134 K Sbjct: 121 PK 122 >gi|254452075|ref|ZP_05065512.1| translation initiation factor IF-3 [Octadecabacter antarcticus 238] gi|198266481|gb|EDY90751.1| translation initiation factor IF-3 [Octadecabacter antarcticus 238] Length = 137 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNAAPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E +++ P Sbjct: 61 DINDYDVKMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEQGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|84502675|ref|ZP_01000794.1| translation initiation factor [Oceanicola batsensis HTCC2597] gi|84389070|gb|EAQ01868.1| translation initiation factor [Oceanicola batsensis HTCC2597] Length = 164 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A++A LDLVEI + TP VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 29 MALAEQAELDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKTIEVKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 89 DTHDYDVKMRNVVKFLEKGDKVKVTLRFRGREMAHQNLGRELLERVAEDVREIGKVENMP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 149 KMEGRQMIMMIGP 161 >gi|149913793|ref|ZP_01902325.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b] gi|149812077|gb|EDM71908.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b] Length = 136 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MEMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQDLGR+LL + E ++ +++ P Sbjct: 61 DTHDYDVKMRNVFRFLENGDKVKITLRFRGREMAHQDLGRDLLHRVAEDVKDLGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMVIGP 133 >gi|188580866|ref|YP_001924311.1| translation initiation factor IF-3 [Methylobacterium populi BJ001] gi|259491508|sp|B1ZGB8|IF3_METPB RecName: Full=Translation initiation factor IF-3 gi|179344364|gb|ACB79776.1| translation initiation factor IF-3 [Methylobacterium populi BJ001] Length = 173 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 67/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ E+++++ EP Sbjct: 100 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEVAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|83952033|ref|ZP_00960765.1| translation initiation factor [Roseovarius nubinhibens ISM] gi|83837039|gb|EAP76336.1| translation initiation factor [Roseovarius nubinhibens ISM] Length = 136 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 68/135 (50%), Positives = 93/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 1 MEMAEEAGLDLVEISPNANPPVCKIMDFGKYKYEQQKRESEARKKQKVIEVKEIKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVKI+++FRGRE+ HQDLGR+LL + + +++ P Sbjct: 61 DTHDYEVKMRSVMKFLENGDKVKITMRFRGREMAHQDLGRQLLQRVSGDIEGVGKVENMP 120 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIMI++ Sbjct: 121 KMEGRQMIMIIAPAA 135 >gi|254465435|ref|ZP_05078846.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I] gi|206686343|gb|EDZ46825.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I] Length = 137 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 70/133 (52%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MDMAAEAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E +I +++ P Sbjct: 61 DTHDYEVKMRNVFKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKDIGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|126740453|ref|ZP_01756141.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6] gi|126718589|gb|EBA15303.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6] Length = 200 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 64 MDLANEAGLDLVEISPNAKPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 124 DTHDYEVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKEIGKVENMP 183 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 184 KMEGRQMIMMIGP 196 >gi|316931436|ref|YP_004106418.1| translation initiation factor IF-3 [Rhodopseudomonas palustris DX-1] gi|315599150|gb|ADU41685.1| translation initiation factor IF-3 [Rhodopseudomonas palustris DX-1] Length = 179 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 46 IKMAMDAGMDLVEISPTSSPPVCKIMDYGKYKYSAQKKAAEARKKQKIVEIKEIKLRPMI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + Sbjct: 106 DDHDYDVKMKAMLRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDA 165 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 166 RFEGRQVVMVLAPR 179 >gi|254474280|ref|ZP_05087670.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062] gi|211956654|gb|EEA91864.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062] Length = 155 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKILD + +Y QK A EARKKQK IKE+KMRP I Sbjct: 20 LAMAVEQGLDLVEIAPNSQPPVCKILDYGRYKYQAQKKAAEARKKQKIVEIKEIKMRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + F G KVK++++FRGRE+ HQDLG +LL +KE +I++++ P Sbjct: 80 DTHDYEVKMRNMMRFFESGDKVKVTLRFRGREMAHQDLGMKLLLKVKEETQDIAKVESHP 139 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 140 KLEGRQMMMVLAP 152 >gi|89067761|ref|ZP_01155215.1| translation initiation factor [Oceanicola granulosus HTCC2516] gi|89046731|gb|EAR52786.1| translation initiation factor [Oceanicola granulosus HTCC2516] Length = 136 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A LDLVEI + +P VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 1 MQLAEDAGLDLVEISPNASPPVCKIMDFGKFKYEQQKRESEARKKQKTIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL G KVK++++FRGRE+ HQDLGR LL + + EI +++ P Sbjct: 61 DTHDYDVKMRNVFKFLESGDKVKVTLRFRGREMAHQDLGRRLLERVADDVQEIGKVENMP 120 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGPTA 135 >gi|148251836|ref|YP_001236421.1| translation initiation factor IF-3 [Bradyrhizobium sp. BTAi1] gi|146404009|gb|ABQ32515.1| bacterial translation initiation factor 3 (bIF-3) [Bradyrhizobium sp. BTAi1] Length = 200 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 67 IKMAAEAGMDLVEISPNNSPPVCKIMDYGKYKYSAQKKAAEARKKQKVVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 127 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+L+ + Sbjct: 187 KFEGRQVVMVLAPR 200 >gi|146337304|ref|YP_001202352.1| translation initiation factor IF-3 [Bradyrhizobium sp. ORS278] gi|146190110|emb|CAL74102.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS278] Length = 200 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 67 IKMAAEAGMDLVEISPNNSPPVCKIMDYGKYKYSAQKKAAEARKKQKVVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 127 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+L+ + Sbjct: 187 KFEGRQVVMVLAPR 200 >gi|307294660|ref|ZP_07574502.1| translation initiation factor IF-3 [Sphingobium chlorophenolicum L-1] gi|306879134|gb|EFN10352.1| translation initiation factor IF-3 [Sphingobium chlorophenolicum L-1] Length = 177 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/134 (50%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ +KE+KMRP I Sbjct: 44 MERAYELGLDLVEVSPTADPPVCKFLDIGKYKYEAQKKANIARKTQKTQELKEIKMRPNI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K + F+ DG KVKI+++FRGRE+ HQ LG +LL + E GEI++++ P Sbjct: 104 DDHDYDTKMKKVHDFIGDGDKVKITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 164 RMEGRQMLMVLAPK 177 >gi|83943233|ref|ZP_00955693.1| translation initiation factor [Sulfitobacter sp. EE-36] gi|83954368|ref|ZP_00963088.1| translation initiation factor [Sulfitobacter sp. NAS-14.1] gi|83841405|gb|EAP80575.1| translation initiation factor [Sulfitobacter sp. NAS-14.1] gi|83846241|gb|EAP84118.1| translation initiation factor [Sulfitobacter sp. EE-36] Length = 201 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 65 MEMAVDAGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ R++ P Sbjct: 125 DTNDYDVKMRNVFKFLDNGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEVGRVENFP 184 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 185 KMEGRQMVMLIGP 197 >gi|254439352|ref|ZP_05052846.1| translation initiation factor IF-3 [Octadecabacter antarcticus 307] gi|198254798|gb|EDY79112.1| translation initiation factor IF-3 [Octadecabacter antarcticus 307] Length = 137 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA EA LDLVEI + TP VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MQMADEAGLDLVEISPNATPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + + +++ P Sbjct: 61 DINDYDVKMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAADTTDQGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|126735563|ref|ZP_01751308.1| translation initiation factor IF-3 [Roseobacter sp. CCS2] gi|126714750|gb|EBA11616.1| translation initiation factor IF-3 [Roseobacter sp. CCS2] Length = 136 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MEMADDAGLDLVEISPNANPPVCKIMDYGKFKYETQKKEAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ LGRELL + E E +++ P Sbjct: 61 DNHDYEVKMRNVFKFLDNGDKVKITLRFRGREMAHQQLGRELLERVAEDTKEAGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|85374713|ref|YP_458775.1| translation initiation factor IF-3 [Erythrobacter litoralis HTCC2594] gi|84787796|gb|ABC63978.1| translation initiation factor 3 [Erythrobacter litoralis HTCC2594] Length = 172 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE L+LVE+ + P V K LD+ K RY QK A ARK QK+ IKEVKMRP I Sbjct: 39 MEQAQEKGLNLVEVSPNADPPVAKFLDVGKYRYEAQKKANLARKTQKTQDIKEVKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ ++ F+ +G KVK++++FRGRE+ HQ+LG +LL+ +++ EI++++ P Sbjct: 99 DTHDYDVKMRNVNKFIENGDKVKVTLRFRGREMAHQNLGMDLLNRVRDDVEEIAKVEAFP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RLEGRQMLMVLAPK 172 >gi|114765978|ref|ZP_01444992.1| translation initiation factor IF-3 [Pelagibaca bermudensis HTCC2601] gi|114541792|gb|EAU44830.1| translation initiation factor IF-3 [Roseovarius sp. HTCC2601] Length = 136 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MELAEQAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VK++ + FL G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DIHDYDVKMRNVLKFLEKGDKVKITLRFRGREMAHQNLGRELLERVAEDVKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|260426749|ref|ZP_05780728.1| translation initiation factor IF-3 [Citreicella sp. SE45] gi|260421241|gb|EEX14492.1| translation initiation factor IF-3 [Citreicella sp. SE45] Length = 235 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/133 (50%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + P VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 100 MELAEQAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEIKFRPGT 159 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 160 DTHDYDVKMRNVLKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDVKELGKVENMP 219 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 220 KMEGRQMIMMIGP 232 >gi|254510306|ref|ZP_05122373.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium KLH11] gi|221534017|gb|EEE37005.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium KLH11] Length = 137 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA + LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAADVGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E ++ +I+ P Sbjct: 61 DTHDYDVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKDLGKIENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|163731400|ref|ZP_02138847.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149] gi|161394854|gb|EDQ19176.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149] Length = 164 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 29 MEMANDAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E R++ P Sbjct: 89 DTNDYDVKMRNVFKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEAGRVENFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 149 KMEGRQMVMLIGP 161 >gi|170749563|ref|YP_001755823.1| translation initiation factor IF-3 [Methylobacterium radiotolerans JCM 2831] gi|259491509|sp|B1M6P9|IF3_METRJ RecName: Full=Translation initiation factor IF-3 gi|170656085|gb|ACB25140.1| translation initiation factor IF-3 [Methylobacterium radiotolerans JCM 2831] Length = 173 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVEI + P VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LNLAEEVGLDLVEIAPNSVPPVCKLLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K++ F +G KVK++++FRGRE+ HQD+G LL +K EI++++ EP Sbjct: 100 DKHDYDTKMKSVHRFFEEGDKVKVTLRFRGREMAHQDIGLRLLERVKSETAEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|294084801|ref|YP_003551561.1| initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322] gi|292664376|gb|ADE39477.1| Initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322] Length = 171 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 95/131 (72%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ +V P VCKILD K +Y QK A E RKKQK +KE+K+RP ID H Sbjct: 41 AEDFGLDLVEVQPNVDPPVCKILDYGKYKYEAQKRANETRKKQKIIEVKEIKLRPNIDEH 100 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A++ FL G KVK++++FRGRE+ HQ+LG +L +++ ++++++ PK E Sbjct: 101 DYQVKMRAVNKFLGSGDKVKVTLRFRGREMAHQELGANVLKRVRDETEDVAKVESHPKME 160 Query: 124 GRQMIMILSSK 134 GRQMIM+++ K Sbjct: 161 GRQMIMVIAPK 171 >gi|85710710|ref|ZP_01041774.1| translation initiation factor 3 [Erythrobacter sp. NAP1] gi|85687888|gb|EAQ27893.1| translation initiation factor 3 [Erythrobacter sp. NAP1] Length = 172 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ L+LVE+ + P VCK LD+ K RY QK A ARK QK+ IKEVKMRP I Sbjct: 39 VEQAQDKGLNLVEVSPNADPPVCKFLDVGKYRYEAQKKANAARKTQKTQDIKEVKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ ++ F+ G KVK++++FRGRE+ HQ LG +LL ++E EI++++ P Sbjct: 99 DTHDYDVKMRNVNKFIDQGDKVKVTLRFRGREMAHQHLGMDLLKRVQEDVEEIAKVEAFP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RLEGRQMLMVLAPK 172 >gi|110680169|ref|YP_683176.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh 114] gi|109456285|gb|ABG32490.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh 114] Length = 164 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 29 MEMAMDAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E R++ P Sbjct: 89 DTNDYDVKMRNVFRFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEAGRVENFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 149 KMEGRQMVMLIGP 161 >gi|315498629|ref|YP_004087433.1| translation initiation factor if-3 [Asticcacaulis excentricus CB 48] gi|315416641|gb|ADU13282.1| translation initiation factor IF-3 [Asticcacaulis excentricus CB 48] Length = 173 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 89/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ + P VCKILD K R+ QK EARKKQK IKE+K+RP ID HD +V Sbjct: 47 GLDLVEVSPTADPPVCKILDYGKYRFQEQKKKAEARKKQKVVEIKEIKLRPNIDKHDYEV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F +G KVK++++FRGRE+ H +LG +LL+ +K F ++++ EPK EGRQM Sbjct: 107 KAKAMTRFFEEGDKVKVTLRFRGREMAHPELGMKLLNQVKADFEATTKVEYEPKMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ K Sbjct: 167 IMILAPK 173 >gi|190575250|ref|YP_001973095.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia K279a] gi|190013172|emb|CAQ46805.1| putative translation initiation factor IF-3 [Stenotrophomonas maltophilia K279a] Length = 180 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 44 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKASEAKKKTKQVEIKEVKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + GFL DG K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 104 DEGDYQIKLRKMRGFLEDGDKIKVNIRFRGREMSHQELGREMANRIETDLGEDIVIESRP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 164 RLEGRQMVMMIAPK 177 >gi|163746608|ref|ZP_02153966.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45] gi|161380493|gb|EDQ04904.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45] Length = 137 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MEMAEEAGLDLVEISPNAKPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL G KVKI+++FRGRE+ HQ+LGRELL + +I R++ P Sbjct: 61 DTNDYDVKMRNVFKFLEGGDKVKITLRFRGREMAHQNLGRELLERVAADTKDIGRVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMVIGP 133 >gi|255262498|ref|ZP_05341840.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62] gi|255104833|gb|EET47507.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62] Length = 136 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/133 (50%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA +A LDLVEI + +P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MDMAVDAGLDLVEISPNASPPVCKIMDFGKFKYETQKKEAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E +++ P Sbjct: 61 DTNDYDVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEYGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|294010777|ref|YP_003544237.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S] gi|292674107|dbj|BAI95625.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S] Length = 177 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVE+ + P VCK LD+ K +Y QK A ARK Q++ IKE+KMRP ID H Sbjct: 47 AYEIGLDLVEVSPNADPPVCKFLDIGKYKYEAQKKANLARKTQRTQEIKEIKMRPNIDDH 106 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K + F+ +G KVKI+++FRGRE+ HQ LG +LL + E GEI++++ P+ E Sbjct: 107 DYDTKMKKVHDFIGEGDKVKITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYPRME 166 Query: 124 GRQMIMILSSK 134 GRQM+M+L+ K Sbjct: 167 GRQMLMVLAPK 177 >gi|326387119|ref|ZP_08208729.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens DSM 19370] gi|326208300|gb|EGD59107.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens DSM 19370] Length = 159 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K RY QK A ARK Q++ IKE+KMRP I Sbjct: 26 IEQAAEVGLDLVEVSPNADPPVCKFLDVGKYRYEAQKKANAARKTQRTQEIKEIKMRPNI 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKL+ + F+ +G KVK++++FRGRE+ HQ LG LL +++ EI++++ P Sbjct: 86 DDHDYDVKLRNVHRFIEEGDKVKVTLRFRGRELSHQQLGMNLLRRVQDDVAEIAKVEAFP 145 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+LS K Sbjct: 146 RMEGRQMLMVLSPK 159 >gi|312113313|ref|YP_004010909.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC 17100] gi|311218442|gb|ADP69810.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC 17100] Length = 173 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 94/131 (71%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLVEI + V KI+D K ++ QK A EARKKQK+ +KE+K+RP ID + Sbjct: 43 AQEAGLDLVEIAVNGEVPVTKIMDFGKYKFQAQKKAAEARKKQKTVEVKEIKLRPNIDTN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK+++I F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP+ E Sbjct: 103 DYNVKMRSIKKFFEEGDKVKVTLRFRGREMAHQDIGMQLLLQVKEETTAIAKVELEPRLE 162 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ + Sbjct: 163 GRQMIMVLAPR 173 >gi|86137521|ref|ZP_01056098.1| translation initiation factor [Roseobacter sp. MED193] gi|85825856|gb|EAQ46054.1| translation initiation factor [Roseobacter sp. MED193] Length = 137 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/133 (50%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MDMANEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL G KVKI+++FRGRE+ HQ+LGR+LL + E ++ +++ P Sbjct: 61 DTNDYSVKMRNVFKFLEAGDKVKITLRFRGREMAHQNLGRQLLERVAEDVKDMGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGP 133 >gi|92115709|ref|YP_575438.1| translation initiation factor IF-3 [Nitrobacter hamburgensis X14] gi|91798603|gb|ABE60978.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter hamburgensis X14] Length = 171 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMDAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQD+G +LL +K ++++ + Sbjct: 98 DDHDYNVKMKAMQRFFEEGDKVKITLRYRGREMAHQDIGTKLLDKVKTDVAAYAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|83309440|ref|YP_419704.1| translation initiation factor 3 [Magnetospirillum magneticum AMB-1] gi|82944281|dbj|BAE49145.1| Translation initiation factor 3 [Magnetospirillum magneticum AMB-1] Length = 173 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/132 (49%), Positives = 95/132 (71%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVE+ + P VCKILD K +Y QK ARKKQK +KEVK+RP ID Sbjct: 42 MAEEAGLDLVEVSPNADPPVCKILDFGKFKYEDQKKKNAARKKQKVIEVKEVKLRPNIDD 101 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK++++ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +++ PK Sbjct: 102 HDYDVKMRSMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLERVRDDLEDLGKVEQIPKM 161 Query: 123 EGRQMIMILSSK 134 EGRQM+M++S+K Sbjct: 162 EGRQMVMVISAK 173 >gi|94495623|ref|ZP_01302203.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58] gi|94425011|gb|EAT10032.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58] Length = 140 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ +KE+KMRP I Sbjct: 7 IEQAYEIGLDLVEVSPNADPPVCKFLDIGKFKYEAQKKANIARKTQKTQELKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K + F+ DG KVKI+++FRGRE+ HQ LG LL + E EI++++ P Sbjct: 67 DDHDYETKMKKVHDFIGDGDKVKITLRFRGRELSHQQLGMNLLQRVAENVQEIAKVEAYP 126 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 127 RMEGRQMLMVLAPK 140 >gi|319942328|ref|ZP_08016643.1| translation initiation factor IF-3 [Sutterella wadsworthensis 3_1_45B] gi|319804201|gb|EFW01101.1| translation initiation factor IF-3 [Sutterella wadsworthensis 3_1_45B] Length = 135 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A +DLVE+ + P VC+++D K RY QK A EA+ KQK IKEVK RP D Sbjct: 1 MAEDAGVDLVEVAPNAVPPVCRLMDYGKFRYQEQKKAQEAKAKQKVVQIKEVKFRPATDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q KL+++ FL DG K KI+++FRGRE+ HQ G +L+ ++E +I++++ PK Sbjct: 61 NDFQTKLRSLKRFLEDGDKAKITLRFRGREMAHQQFGTQLMDRVREELVDIAQVEHAPKL 120 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L+ K Sbjct: 121 EGRQMIMVLAPK 132 >gi|146276385|ref|YP_001166544.1| translation initiation factor IF-3 [Rhodobacter sphaeroides ATCC 17025] gi|145554626|gb|ABP69239.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides ATCC 17025] Length = 194 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 59 MSMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + + E+ +++ Sbjct: 119 DTHDFDVKMRSVLKFLGEGDKVKVTLRFRGREMAHQELGLELLNRVAAQVSEAEVGKVEA 178 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 179 MPKLEGRQMVMMIAPK 194 >gi|85714127|ref|ZP_01045116.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A] gi|85699253|gb|EAQ37121.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A] Length = 171 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMEAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 98 DDHDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKADVAAFAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|126726282|ref|ZP_01742123.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2150] gi|126704145|gb|EBA03237.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2150] Length = 171 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 68/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 36 MEQAEQAGLDLVEISPNANPPVCKIMDFGKYKYEQQKRESEARKKQKIIEIKEIKFRPNT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E+ +I+ P Sbjct: 96 DKHDYGVKMRNVFKFLENGDKVKITMRFRGREMAHQNLGRELLERVAADVVELGKIENMP 155 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 156 KMEGRQMIMMIGP 168 >gi|194366577|ref|YP_002029187.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia R551-3] gi|194349381|gb|ACF52504.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia R551-3] Length = 180 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 44 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKASEAKKKTKQVEIKEVKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + GFL +G K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 104 DEGDYQIKLRKMRGFLEEGDKIKVNIRFRGREMSHQELGREMANRIETDLGEDIVIESRP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 164 RLEGRQMVMMIAPK 177 >gi|75674268|ref|YP_316689.1| translation initiation factor IF-3 [Nitrobacter winogradskyi Nb-255] gi|74419138|gb|ABA03337.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter winogradskyi Nb-255] Length = 171 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMEAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 98 DDHDYNVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKADVSAYAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|23016432|ref|ZP_00056188.1| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 173 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 95/132 (71%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVE+ + P VCKILD K +Y QK ARKKQK +KE+K+RP ID Sbjct: 42 MAEEAGLDLVEVSPNADPPVCKILDFGKFKYEDQKKKNAARKKQKVIEVKEIKLRPNIDD 101 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK++++ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +++ PK Sbjct: 102 HDYGVKMRSMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLEKVRDDLEDLGKVEQVPKM 161 Query: 123 EGRQMIMILSSK 134 EGRQM+M++S+K Sbjct: 162 EGRQMVMVISAK 173 >gi|56697480|ref|YP_167848.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3] gi|81676179|sp|Q5LQ58|IF3_SILPO RecName: Full=Translation initiation factor IF-3 gi|56679217|gb|AAV95883.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3] Length = 182 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/125 (52%), Positives = 87/125 (69%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP D HD +VK Sbjct: 54 LDLVEISPNATPPVCKIMDFGKYKYEQQKRESEARKKQKIIEVKEVKFRPNTDTHDYEVK 113 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 ++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +I+ PK EGRQMI Sbjct: 114 MRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKEMGKIENMPKMEGRQMI 173 Query: 129 MILSS 133 M++ Sbjct: 174 MMIGP 178 >gi|254420070|ref|ZP_05033794.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3] gi|196186247|gb|EDX81223.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3] Length = 162 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI S+ P V KILD K R+ QK E RK+QK +KE+K+RP I Sbjct: 29 LEAAEEAGMDLVEIVSTSEPPVAKILDYGKHRFQEQKKKAEQRKRQKVVELKEIKLRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++ F EI++++ P Sbjct: 89 DTHDYEVKAKAMHRFFDEGDKVKVTLRFRGREMAHPELGMKLLNKVQADFDEIAKVEFAP 148 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIMIL+ + Sbjct: 149 KMEGRQMIMILAPR 162 >gi|288959314|ref|YP_003449655.1| translation initiation factor IF-3 [Azospirillum sp. B510] gi|288911622|dbj|BAI73111.1| translation initiation factor IF-3 [Azospirillum sp. B510] Length = 187 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 93/131 (70%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVE+ P VCKILD K +Y QK A EARKKQK +KE+K+RP ID + Sbjct: 57 AEDAGLDLVEVAPQAEPPVCKILDYGKFKYEAQKKANEARKKQKIIEVKEIKLRPNIDDN 116 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A FL +G KVK++++FRGRE+ HQDLG +L +++ E+++++ PK E Sbjct: 117 DYDVKMRAARRFLEEGDKVKVTMRFRGREMAHQDLGMNVLVRVRDALDELAKVEQMPKLE 176 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ + Sbjct: 177 GRQMIMVLAPR 187 >gi|299133291|ref|ZP_07026486.1| translation initiation factor IF-3 [Afipia sp. 1NLS2] gi|298593428|gb|EFI53628.1| translation initiation factor IF-3 [Afipia sp. 1NLS2] Length = 200 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + P VCKI+D K ++ QK A EARKKQK IKE+K+RP+I Sbjct: 67 VKMAMDAGMDLVEISPNNNPPVCKIMDYGKYKFQAQKKAAEARKKQKIVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K +I++++ + Sbjct: 127 DDHDYDVKMRAMLRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKAAVADIAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 187 RFEGRQVVMVLAPR 200 >gi|303257522|ref|ZP_07343534.1| translation initiation factor IF-3 [Burkholderiales bacterium 1_1_47] gi|331000213|ref|ZP_08323897.1| translation initiation factor IF-3 [Parasutterella excrementihominis YIT 11859] gi|302859492|gb|EFL82571.1| translation initiation factor IF-3 [Burkholderiales bacterium 1_1_47] gi|329572379|gb|EGG54032.1| translation initiation factor IF-3 [Parasutterella excrementihominis YIT 11859] Length = 177 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA++DLVE+ + P VC+++D K RY QK A E + KQK +KEVK RP Sbjct: 41 LAMAEEADVDLVEVAPNARPPVCRLMDYGKFRYQEQKKAQEQKAKQKVIQVKEVKFRPQT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+A+ FL DG K K+++++RGRE+ HQ+ G +LL+ +KE +I++++ P Sbjct: 101 DKNDYDTKLRALTRFLADGNKAKVTLRYRGREMAHQEFGTDLLNKVKEDLADIAQVESFP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 161 KLEGRQMIMVLAPK 174 >gi|253577273|ref|ZP_04854592.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843387|gb|EES71416.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 164 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/134 (51%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAMDLNLDLVNVAPTAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL+DG KVK SV+FRGREI H D+G+++L +K+ EIS ++ P Sbjct: 90 EEHDFQTKLRNVIKFLKDGDKVKCSVRFRGREITHADIGKKILDRVKDEVAEISNVERVP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|310815870|ref|YP_003963834.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25] gi|308754605|gb|ADO42534.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25] Length = 136 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 88/131 (67%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLVEI + P VCKI+D K +Y QK EAR+ QK IKEVK RP D Sbjct: 2 LAEEAGLDLVEISPNAVPPVCKIMDFGKYKYETQKKEAEARRNQKVIEIKEVKFRPNTDT 61 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK++++ FL +G KVK++++FRGRE+ HQDLGR+LL + E +++ PK Sbjct: 62 HDYDVKMRSVLKFLGEGDKVKVTLRFRGREMAHQDLGRQLLDRVAEDVKAEGKVESMPKL 121 Query: 123 EGRQMIMILSS 133 EGRQM+M++ Sbjct: 122 EGRQMVMMIGP 132 >gi|209966089|ref|YP_002299004.1| translation initiation factor IF-3 InfC [Rhodospirillum centenum SW] gi|209959555|gb|ACJ00192.1| translation initiation factor IF-3 InfC [Rhodospirillum centenum SW] Length = 144 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 94/131 (71%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVE+ + P VCKILD K +Y QK A EARKKQK +KEVK+RP ID H Sbjct: 14 AEEAGLDLVEVSPNADPPVCKILDYGKFKYEAQKKANEARKKQKIIEVKEVKLRPNIDDH 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D +K++ + FL +G KVK++++FRGRE+ HQDLG +L +++ ++++++ PK E Sbjct: 74 DYDIKMRNMRRFLEEGDKVKVTMRFRGREMAHQDLGMVILVKVRDTLEDLAKVEQMPKLE 133 Query: 124 GRQMIMILSSK 134 G+QMIM+L+ + Sbjct: 134 GKQMIMVLAPR 144 >gi|221638348|ref|YP_002524610.1| translation initiation factor IF-3 [Rhodobacter sphaeroides KD131] gi|332560369|ref|ZP_08414691.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N] gi|221159129|gb|ACM00109.1| Translation initiation factor IF-3 [Rhodobacter sphaeroides KD131] gi|332278081|gb|EGJ23396.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N] Length = 136 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 1 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 61 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 120 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 121 MPKLEGRQMVMMIAPK 136 >gi|3122257|sp|O33567|IF3_RHOS4 RecName: Full=Translation initiation factor IF-3 gi|2370447|emb|CAA75028.1| translation initiation factor 3 [Rhodobacter sphaeroides] Length = 181 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 46 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 106 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 165 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 166 MPKLEGRQMVMMIAPK 181 >gi|149185627|ref|ZP_01863943.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21] gi|148830847|gb|EDL49282.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21] Length = 140 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 93/133 (69%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A E L+LVE+ + P VCK LD+ K RY QK A ARK QK+ IKEVKMRP ID Sbjct: 8 EQANELGLNLVEVSPNADPPVCKFLDVGKYRYEAQKKANLARKTQKTQDIKEVKMRPNID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK++ ++ F+ +G KVK +++FRGRE+ HQ LG +LL+ +++ EI++++ P+ Sbjct: 68 DHDYDVKMRNVNKFIENGDKVKCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPR 127 Query: 122 FEGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 128 LEGRQMVMVLAPK 140 >gi|300021917|ref|YP_003754528.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans ATCC 51888] gi|299523738|gb|ADJ22207.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans ATCC 51888] Length = 176 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 67/131 (51%), Positives = 88/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + LDLVEI P VCKILD K ++ QK A EARK QK +KE+KMRP ID H Sbjct: 46 AGDVGLDLVEISPDAEPPVCKILDFGKFKFQEQKKAAEARKNQKIVELKEIKMRPGIDDH 105 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+AI F +G KVKI+++FRGRE+ H LG +L +K I++++ EP+FE Sbjct: 106 DYDVKLRAIKRFFEEGDKVKITLRFRGREMAHSQLGMAVLQRVKVDTEAIAKVESEPRFE 165 Query: 124 GRQMIMILSSK 134 GRQM+M+L+ K Sbjct: 166 GRQMVMVLAPK 176 >gi|332798665|ref|YP_004460164.1| Translation initiation factor IF-3 [Tepidanaerobacter sp. Re1] gi|332696400|gb|AEE90857.1| Translation initiation factor IF-3 [Tepidanaerobacter sp. Re1] Length = 189 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE LDLV+I S P VCKI+D K +Y K EARKKQK +KE++M P I Sbjct: 50 LHYAQEVQLDLVKISSDAKPPVCKIMDFGKYKYEQSKREKEARKKQKVINVKEIRMNPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV+LK FL+DG KVK+S++FRGR++ H LG E+L+ + E E+ ++ P Sbjct: 110 DEHDFQVRLKNTIKFLKDGDKVKVSIRFRGRQMTHTKLGEEVLNRVVENISEVGVVEKPP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+++ K Sbjct: 170 KMEGRNMVMVIAPK 183 >gi|77462485|ref|YP_351989.1| translation initiation factor IF-3 [Rhodobacter sphaeroides 2.4.1] gi|126461362|ref|YP_001042476.1| translation initiation factor IF-3 [Rhodobacter sphaeroides ATCC 17029] gi|77386903|gb|ABA78088.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides 2.4.1] gi|126103026|gb|ABN75704.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides ATCC 17029] Length = 194 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 59 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 119 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 178 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 179 MPKLEGRQMVMMIAPK 194 >gi|225076639|ref|ZP_03719838.1| hypothetical protein NEIFLAOT_01689 [Neisseria flavescens NRL30031/H210] gi|224952045|gb|EEG33254.1| hypothetical protein NEIFLAOT_01689 [Neisseria flavescens NRL30031/H210] Length = 134 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|254524881|ref|ZP_05136936.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14] gi|219722472|gb|EED40997.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14] Length = 154 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 18 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKANEAKKKSKQVEIKEVKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL DG K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 78 DEGDYQIKLRKMREFLEDGDKIKVNIRFRGREMSHQELGREMANRIEADLGEDIVIESRP 137 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPK 151 >gi|313896162|ref|ZP_07829715.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137 str. F0430] gi|312974961|gb|EFR40423.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137 str. F0430] Length = 188 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPNARPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERMGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKA 165 >gi|209883596|ref|YP_002287453.1| translation initiation factor IF-3 [Oligotropha carboxidovorans OM5] gi|209871792|gb|ACI91588.1| translation initiation factor IF-3 [Oligotropha carboxidovorans OM5] Length = 200 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/131 (47%), Positives = 95/131 (72%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + +DLVEI + +P VCKI+D K ++ QK A EARKKQK IKE+K+RP+ID H Sbjct: 70 AADLGMDLVEISPNNSPPVCKIMDYGKYKFQAQKKAAEARKKQKIVEIKEIKLRPMIDDH 129 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A+ F +G KVKI++++RGRE+ HQDLG +LL +K ++++++ + KFE Sbjct: 130 DYDVKMRAMLRFFEEGDKVKITLRYRGREMAHQDLGTKLLEKVKAAVADVAKVEQDAKFE 189 Query: 124 GRQMIMILSSK 134 GRQ++M+L+ + Sbjct: 190 GRQVVMVLAPR 200 >gi|284799643|ref|ZP_05984465.2| translation initiation factor IF-3 [Neisseria subflava NJ9703] gi|284797593|gb|EFC52940.1| translation initiation factor IF-3 [Neisseria subflava NJ9703] Length = 184 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 49 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 109 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFP 168 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 169 KMEGRQMVMMIAPK 182 >gi|241758599|ref|ZP_04756714.1| translation initiation factor IF-3 [Neisseria flavescens SK114] gi|241321251|gb|EER57423.1| translation initiation factor IF-3 [Neisseria flavescens SK114] Length = 155 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPK 153 >gi|320529199|ref|ZP_08030291.1| translation initiation factor IF-3 [Selenomonas artemidis F0399] gi|320138829|gb|EFW30719.1| translation initiation factor IF-3 [Selenomonas artemidis F0399] Length = 214 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 57 LRMAEEQHLDLVEVAPNARPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 117 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERMGDLVSIERGA 176 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 177 KLEGKNMTMILSPKA 191 >gi|238927111|ref|ZP_04658871.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531] gi|238885091|gb|EEQ48729.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531] Length = 188 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFAEEGNKVKVTIMFRGRELSHPELGRAVLDRVSERLGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKV 165 >gi|254292437|ref|YP_003058460.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814] gi|254040968|gb|ACT57763.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814] Length = 179 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/134 (54%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+ P+V KILD KLR+ QK A+KKQK+ +KE+KMRP I Sbjct: 46 LDAAREAGLDLVEVSGGSQPTVVKILDYGKLRFEEQKKRAAAKKKQKAADLKEIKMRPNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F DG KVK++++FRGRE+ HQ LG ELL +KE F EIS+++ EP Sbjct: 106 DTHDYEVKKKAMTRFFDDGDKVKVTLRFRGREMAHQQLGMELLQRVKEDFAEISKVETEP 165 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+LS + Sbjct: 166 KLEGRQMTMVLSPR 179 >gi|269213638|ref|ZP_05982444.2| translation initiation factor IF-3 [Neisseria cinerea ATCC 14685] gi|269145721|gb|EEZ72139.1| translation initiation factor IF-3 [Neisseria cinerea ATCC 14685] Length = 134 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLVDGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|255066458|ref|ZP_05318313.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256] gi|288576251|ref|ZP_05978465.2| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996] gi|255049338|gb|EET44802.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256] gi|288565906|gb|EFC87466.1| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996] Length = 134 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|319637848|ref|ZP_07992614.1| translation initiation factor IF-3 [Neisseria mucosa C102] gi|317401003|gb|EFV81658.1| translation initiation factor IF-3 [Neisseria mucosa C102] Length = 155 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPK 153 >gi|294670481|ref|ZP_06735361.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307760|gb|EFE49003.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 142 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|298369383|ref|ZP_06980701.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014 str. F0314] gi|298283386|gb|EFI24873.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014 str. F0314] Length = 155 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPK 153 >gi|254460765|ref|ZP_05074181.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2083] gi|206677354|gb|EDZ41841.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium HTCC2083] Length = 134 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 87/131 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP D Sbjct: 1 MAEEVGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNTDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D +VK++ + FL +G KVK++++FRGRE+ H +LGRELL + E R++ PK Sbjct: 61 NDYEVKMRNVYKFLENGDKVKVTLRFRGREMAHLNLGRELLERVAADTKEHGRVENFPKM 120 Query: 123 EGRQMIMILSS 133 EGRQM+M++ Sbjct: 121 EGRQMVMLIGP 131 >gi|329118119|ref|ZP_08246831.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC BAA-1200] gi|327465779|gb|EGF12052.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC BAA-1200] Length = 134 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 91/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDFGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIEQFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|87200551|ref|YP_497808.1| translation initiation factor IF-3 [Novosphingobium aromaticivorans DSM 12444] gi|87136232|gb|ABD26974.1| bacterial translation initiation factor 3 (bIF-3) [Novosphingobium aromaticivorans DSM 12444] Length = 173 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDLVE+ + P VCK LD+ K RY QK A ARK QK+ IKE+KMRP I Sbjct: 40 IEQAADVGLDLVEVSPNADPPVCKFLDVGKFRYEAQKKANLARKSQKTQEIKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ + F+ +G KVKI+++FRGRE+ HQ LG LL +++ EI++++ P Sbjct: 100 DDHDYETKMRNVVKFIGEGDKVKITLRFRGRELSHQQLGMNLLRKVQDDVAEIAKVEAFP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 160 RMEGRQMLMVLAPK 173 >gi|304436954|ref|ZP_07396917.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369905|gb|EFM23567.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 188 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERLGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKV 165 >gi|332967751|gb|EGK06857.1| translation initiation factor IF3 [Desmospora sp. 8437] Length = 166 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLV + P VC+I+D K RY K EARK QK+ IKE++ P I Sbjct: 29 LRLAREADLDLVNVAPKAKPPVCRIMDYGKYRYEQSKREKEARKNQKTIQIKEIRFSPSI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ KL+ + FL +G KVK++++FRGREI HQD+GR +L+ + E EI ++ P Sbjct: 89 EEHDVNTKLRNVKKFLSNGDKVKLTIRFRGREITHQDIGRRILNRMAEEVKEIGDVERYP 148 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMILS K Sbjct: 149 KMEGRHMIMILSPK 162 >gi|296536618|ref|ZP_06898694.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC 49957] gi|296263052|gb|EFH09601.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC 49957] Length = 162 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E +DL+EI + P VCKI D K +Y QK A EARKKQK IKE+K+RP ID H Sbjct: 32 AYELGMDLLEISPNAVPPVCKITDYGKYKYEQQKKANEARKKQKIVEIKEIKVRPNIDDH 91 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A F+ +G KVK++++FRGRE+ HQDLG ++L I+ E+++++ P+ E Sbjct: 92 DYDVKMRAAKSFIEEGDKVKVTLRFRGREMAHQDLGVKVLERIRTELAELAKVEQMPRLE 151 Query: 124 GRQMIMILSSK 134 RQMIM+L+ K Sbjct: 152 NRQMIMVLAPK 162 >gi|285017865|ref|YP_003375576.1| translation initiation factor if-3 [contains: if-3l; if-3s] protein [Xanthomonas albilineans GPE PC73] gi|283473083|emb|CBA15588.1| probable translation initiation factor if-3 [contains: if-3l; if-3s] protein [Xanthomonas albilineans] Length = 153 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 18 LAMAEEDGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKEIKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 78 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRP 137 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPK 151 >gi|319943476|ref|ZP_08017758.1| translation initiation factor IF3 [Lautropia mirabilis ATCC 51599] gi|319743291|gb|EFV95696.1| translation initiation factor IF3 [Lautropia mirabilis ATCC 51599] Length = 191 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 93/133 (69%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+EA++DLVEI + TP VC+++D K RY QK A EA+ +QK IKEVK RP D Sbjct: 56 RMAEEADVDLVEIAPNATPPVCRLMDYGKFRYQEQKRAAEAKARQKVVQIKEVKFRPQTD 115 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL+DG KVKI+++FRGRE+ HQ+ G LL ++ EI++++ P+ Sbjct: 116 DGDYNIKLRNMISFLQDGDKVKITLRFRGREMAHQEFGIRLLERVRNDIEEIAQVESMPR 175 Query: 122 FEGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 176 LEGRQMVMMVAPK 188 >gi|161869663|ref|YP_001598830.1| translation initiation factor IF-3 [Neisseria meningitidis 053442] gi|239998485|ref|ZP_04718409.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|240013610|ref|ZP_04720523.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI18] gi|240016049|ref|ZP_04722589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA6140] gi|240080191|ref|ZP_04724734.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|240112404|ref|ZP_04726894.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|240115144|ref|ZP_04729206.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|240117428|ref|ZP_04731490.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|240120680|ref|ZP_04733642.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID24-1] gi|240122984|ref|ZP_04735940.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|240125236|ref|ZP_04738122.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|240127690|ref|ZP_04740351.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|260441038|ref|ZP_05794854.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|161595216|gb|ABX72876.1| translation initiation factor IF-3 [Neisseria meningitidis 053442] Length = 136 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 1 MAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 61 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 121 KMEGRQMVMMIAPK 134 >gi|148555658|ref|YP_001263240.1| translation initiation factor IF-3 [Sphingomonas wittichii RW1] gi|148500848|gb|ABQ69102.1| bacterial translation initiation factor 3 (bIF-3) [Sphingomonas wittichii RW1] Length = 169 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 36 IEQAQEAGLDLVEVSPNADPPVCKFLDVGKFKYEAQKKANLARKSQKTQEIKEIKMRPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K I F+ +G KVK++++FRGRE+ H LG ++L ++ E ++++ P Sbjct: 96 DDHDYETKMKKIHEFIDEGDKVKVTLRFRGRELAHGQLGMQVLQRVQADMAETAKVEQFP 155 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 156 RMEGRQMLMVIAPK 169 >gi|103485760|ref|YP_615321.1| translation initiation factor IF-3 [Sphingopyxis alaskensis RB2256] gi|98975837|gb|ABF51988.1| bacterial translation initiation factor 3 (bIF-3) [Sphingopyxis alaskensis RB2256] Length = 173 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 40 IEQAAEVGLDLVEVSPNADPPVCKFLDVGKYKYEAQKKANLARKSQKTQEIKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+K + FL +G KVK++++FRGRE+ H LG +L + E E+++++ P Sbjct: 100 DDHDFDVKMKKVFDFLEEGDKVKMTMRFRGREMSHTQLGLNVLQRVAELTAEVAKVEAHP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 160 RTEGRQMLMVLAPK 173 >gi|302381459|ref|YP_003817282.1| translation initiation factor IF-3 [Brevundimonas subvibrioides ATCC 15264] gi|302192087|gb|ADK99658.1| translation initiation factor IF-3 [Brevundimonas subvibrioides ATCC 15264] Length = 188 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/126 (50%), Positives = 91/126 (72%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV+I S+ P V KILD K R+ QK EARK+QK +KE+K+RP ID+HD +VK Sbjct: 63 MDLVQIVSTSEPPVAKILDYGKFRFQEQKKKAEARKRQKVVELKEIKLRPNIDIHDYEVK 122 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++ F EI++++ P+ EGRQMI Sbjct: 123 AKAMHRFFDEGDKVKVTLRFRGREMAHPELGMKLLNKVQADFDEIAKVEYAPRMEGRQMI 182 Query: 129 MILSSK 134 MIL+ K Sbjct: 183 MILAPK 188 >gi|296133380|ref|YP_003640627.1| translation initiation factor IF-3 [Thermincola sp. JR] gi|296031958|gb|ADG82726.1| translation initiation factor IF-3 [Thermincola potens JR] Length = 173 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE +LDLVE+ S P VC+I+D K +Y K EARKKQK +KE+K+RP I Sbjct: 38 LRFAQEKDLDLVEVAPSAKPPVCRIMDYGKYKYEQSKREKEARKKQKIINVKEIKLRPNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K I FL+DG KVK++V FRGRE+ H DLG++LL + ++ +I+ ++ +P Sbjct: 98 EAHDLVTKTNNIVRFLKDGDKVKVTVMFRGREMAHTDLGKQLLDKVVDQLKDITIVERQP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 158 KVEGRNMVMILAPK 171 >gi|167461622|ref|ZP_02326711.1| translation initiation factor IF-3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383962|ref|ZP_08057692.1| translation initiation factor IF-3-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151439|gb|EFX44626.1| translation initiation factor IF-3-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 166 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A +ANLDLV + + P VC+I+D K RY +QK EARK QK +KE+++ I Sbjct: 30 LQIAADANLDLVNVAPTAKPPVCRIMDYGKYRYEMQKKEKEARKNQKVVDLKEIRLSASI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL+DG KVK SV+FRGREI H ++G+++L + EI+ ++ P Sbjct: 90 DEHDFQTKLRNAIKFLKDGDKVKASVRFRGREIAHSEIGKKVLERMAAETAEIASVERAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|78042833|ref|YP_360407.1| translation initiation factor IF-3 [Carboxydothermus hydrogenoformans Z-2901] gi|77994948|gb|ABB13847.1| translation initiation factor IF-3 [Carboxydothermus hydrogenoformans Z-2901] Length = 169 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 66/135 (48%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D K RY K EARKKQK +KE+K+RP I Sbjct: 35 LKIAEEMELDLVEIAPTAKPPVCKIMDYGKYRYQQSKKEKEARKKQKIINVKEIKIRPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKL+ + FL DG KVK++V FRGRE+ H ++ ELL+ + + G I+ ++ Sbjct: 95 EEHDFQVKLRNVLRFLEDGDKVKVTVMFRGRELSHPEIAYELLNKMAQEVGSIAVVERPA 154 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 155 KLEGRNMIMILAPKS 169 >gi|319786722|ref|YP_004146197.1| translation initiation factor IF-3 [Pseudoxanthomonas suwonensis 11-1] gi|317465234|gb|ADV26966.1| translation initiation factor IF-3 [Pseudoxanthomonas suwonensis 11-1] Length = 189 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCK++D K ++ +QK A EA+KK + IKEVK RPV Sbjct: 54 LRLAEEEGLDLVEIQPNADPPVCKVMDFGKFKFEMQKKANEAKKKSRQVEIKEVKFRPVT 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGR++ + I+ GE I+ P Sbjct: 114 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGRQMAARIEGDLGEDIVIESRP 173 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 174 RLEGRQMVMMIAPK 187 >gi|325919877|ref|ZP_08181867.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas gardneri ATCC 19865] gi|325549661|gb|EGD20525.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas gardneri ATCC 19865] Length = 147 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 14 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ S I+ GE I+ P+ E Sbjct: 74 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMASRIEADLGEDIVIESRPRLE 133 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 134 GRQMVMMIAPK 144 >gi|260887110|ref|ZP_05898373.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|330839117|ref|YP_004413697.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|260863172|gb|EEX77672.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|329746881|gb|AEC00238.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] Length = 193 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/135 (48%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK IKEVK+RP I Sbjct: 53 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKYRYEQQKREKEAKKKQKIVTIKEVKLRPNI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL +G KVK+++ FRGRE+ H +LGRE+L+ + +R E+ I+ + Sbjct: 113 EQHDFDVKLKNALRFLEEGNKVKVTIMFRGRELSHPELGREVLNKVADRLKELVSIERDA 172 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MIL+ K Sbjct: 173 KLEGKNMTMILAPKA 187 >gi|260575175|ref|ZP_05843175.1| translation initiation factor IF-3 [Rhodobacter sp. SW2] gi|259022435|gb|EEW25731.1| translation initiation factor IF-3 [Rhodobacter sp. SW2] Length = 226 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/129 (48%), Positives = 86/129 (66%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EA LDLVEI + P VCKI+D K +Y QK EARKKQ KE+K RP D HD Sbjct: 98 EAGLDLVEISPNAEPPVCKIMDFGKYKYEQQKREAEARKKQHIIETKEIKFRPGTDTHDY 157 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + GE +++ P+ EGR Sbjct: 158 DVKMRSVLKFLEEGDKVKVTLRFRGREMAHQELGLELLNRVAADVGEAGKVESMPRLEGR 217 Query: 126 QMIMILSSK 134 QM+M++ K Sbjct: 218 QMVMMIGPK 226 >gi|218288922|ref|ZP_03493173.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius LAA1] gi|258512136|ref|YP_003185570.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241011|gb|EED08188.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius LAA1] gi|257478862|gb|ACV59181.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 154 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + + P VC+I+D K +Y K E+RK QK +KEV+M P I Sbjct: 17 LRLAEERNLDLVNVAPNAKPPVCRIMDYGKFKYEQSKRERESRKHQKVVLLKEVRMTPNI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL VKLK + FL +G KVK+SV+FRGREI HQ++G+ELL + + E + ++ P Sbjct: 77 DEHDLNVKLKNVLKFLSEGSKVKVSVRFRGREITHQNIGQELLERLAKSAEEHAIVERAP 136 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 137 KLEGRHMVMILAPK 150 >gi|59800744|ref|YP_207456.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA 1090] gi|121634518|ref|YP_974763.1| translation initiation factor IF-3 [Neisseria meningitidis FAM18] gi|218767843|ref|YP_002342355.1| translation initiation factor IF-3 [Neisseria meningitidis Z2491] gi|54037381|sp|P65138|IF3_NEIMB RecName: Full=Translation initiation factor IF-3 gi|54041111|sp|P65137|IF3_NEIMA RecName: Full=Translation initiation factor IF-3 gi|75507420|sp|Q5F9U3|IF3_NEIG1 RecName: Full=Translation initiation factor IF-3 gi|166198958|sp|A1KSY3|IF3_NEIMF RecName: Full=Translation initiation factor IF-3 gi|59717639|gb|AAW89044.1| putative translation initiation factor IF-3 [Neisseria gonorrhoeae FA 1090] gi|120866224|emb|CAM09964.1| putative translation initiation factor IF-3 [Neisseria meningitidis FAM18] gi|121051851|emb|CAM08157.1| putative translation initiation factor IF-3 [Neisseria meningitidis Z2491] Length = 173 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 38 LAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 98 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 157 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 158 KMEGRQMVMMIAPK 171 >gi|260892436|ref|YP_003238533.1| translation initiation factor IF-3 [Ammonifex degensii KC4] gi|260864577|gb|ACX51683.1| translation initiation factor IF-3 [Ammonifex degensii KC4] Length = 165 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ P VCKI+D K +Y + K EARKKQ+ +KEVK+RP I Sbjct: 20 LRIAEERGLDLVEVAPQARPPVCKIMDYGKYKYEMSKRDREARKKQRLVTVKEVKLRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK + + FL+DG KVK+++ FRGREI+H LG LL +KE + ++ P Sbjct: 80 EEHDFQVKARNVIRFLKDGDKVKVTIMFRGREIIHPQLGERLLERLKEEVAAVGVVERAP 139 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 140 KLEGRNMVMILAPK 153 >gi|194098021|ref|YP_002001069.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945] gi|254804602|ref|YP_003082823.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14] gi|269214427|ref|ZP_05986527.2| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970] gi|304387977|ref|ZP_07370149.1| translation initiation factor IF3 [Neisseria meningitidis ATCC 13091] gi|193933311|gb|ACF29135.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945] gi|254668144|emb|CBA04771.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14] gi|254674304|emb|CBA10088.1| translation initiation factor IF-3 [Neisseria meningitidis alpha275] gi|269209845|gb|EEZ76300.1| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970] gi|304337976|gb|EFM04114.1| translation initiation factor IF3 [Neisseria meningitidis ATCC 13091] gi|308388910|gb|ADO31230.1| putative translation initiation factor IF-3 [Neisseria meningitidis alpha710] gi|316983702|gb|EFV62683.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76] gi|317163763|gb|ADV07304.1| translation initiation factor 3 [Neisseria gonorrhoeae TCDC-NG08107] gi|319410090|emb|CBY90426.1| translation initiation factor IF-3 [Neisseria meningitidis WUE 2594] gi|325127773|gb|EGC50681.1| translation initiation factor IF-3 [Neisseria meningitidis N1568] gi|325133765|gb|EGC56421.1| translation initiation factor IF-3 [Neisseria meningitidis M13399] gi|325137876|gb|EGC60451.1| translation initiation factor IF-3 [Neisseria meningitidis ES14902] gi|325197940|gb|ADY93396.1| translation initiation factor IF-3 [Neisseria meningitidis G2136] gi|325200595|gb|ADY96050.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76] gi|325202483|gb|ADY97937.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240149] gi|325203808|gb|ADY99261.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240355] Length = 134 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 90/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|15676619|ref|NP_273763.1| translation initiation factor IF-3 [Neisseria meningitidis MC58] gi|254493204|ref|ZP_05106375.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291] gi|268594344|ref|ZP_06128511.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|268596340|ref|ZP_06130507.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|268598467|ref|ZP_06132634.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|268600820|ref|ZP_06134987.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|268603125|ref|ZP_06137292.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|268681606|ref|ZP_06148468.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|268683834|ref|ZP_06150696.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|268686075|ref|ZP_06152937.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|291044370|ref|ZP_06570079.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|293399556|ref|ZP_06643709.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62] gi|313668801|ref|YP_004049085.1| translation initiation factor IF-3 [Neisseria lactamica ST-640] gi|7225947|gb|AAF41134.1| translation initiation factor 3 [Neisseria meningitidis MC58] gi|226512244|gb|EEH61589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291] gi|261392910|emb|CAX50491.1| translation initiation factor IF-3 [Neisseria meningitidis 8013] gi|268547733|gb|EEZ43151.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|268550128|gb|EEZ45147.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|268582598|gb|EEZ47274.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|268584951|gb|EEZ49627.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|268587256|gb|EEZ51932.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|268621890|gb|EEZ54290.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|268624118|gb|EEZ56518.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|268626359|gb|EEZ58759.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|291011264|gb|EFE03260.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|291610125|gb|EFF39247.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62] gi|313006263|emb|CBN87725.1| putative translation initiation factor IF-3 [Neisseria lactamica 020-06] gi|325131826|gb|EGC54526.1| translation initiation factor IF-3 [Neisseria meningitidis M6190] gi|325136056|gb|EGC58666.1| translation initiation factor IF-3 [Neisseria meningitidis M0579] gi|325140124|gb|EGC62653.1| translation initiation factor IF-3 [Neisseria meningitidis CU385] gi|325144076|gb|EGC66384.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240013] gi|325206437|gb|ADZ01890.1| translation initiation factor IF-3 [Neisseria meningitidis M04-240196] gi|325207765|gb|ADZ03217.1| translation initiation factor IF-3 [Neisseria meningitidis NZ-05/33] Length = 155 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPK 153 >gi|332187437|ref|ZP_08389175.1| translation initiation factor IF-3 [Sphingomonas sp. S17] gi|332012598|gb|EGI54665.1| translation initiation factor IF-3 [Sphingomonas sp. S17] Length = 172 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 39 MAQAQELGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKSQKTQEIKEIKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K + F+ +G KVK++++FRGRE+ H LG +L + E+ E+++++ P Sbjct: 99 DDHDYDTKMKKVVEFIGEGDKVKVTMRFRGRELSHGQLGMNVLQRVAEQVAEVAKVEAYP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RMEGRQMLMVLAPK 172 >gi|241762459|ref|ZP_04760536.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753471|ref|YP_003226364.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241372961|gb|EER62628.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552834|gb|ACV75780.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 169 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+K+RP I Sbjct: 36 MEQAQEVGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKTQKTQEIKEIKLRPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K I FL DG KVK++++FRGRE+ H LG +++ ++ EI++++ P Sbjct: 96 DQHDYDTKMKKIVQFLEDGDKVKVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHP 155 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 156 RMEGRQMLMVVAPK 169 >gi|21231897|ref|NP_637814.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767975|ref|YP_242737.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. 8004] gi|188991101|ref|YP_001903111.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. B100] gi|21113621|gb|AAM41738.1| initiation factor IF-3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573307|gb|AAY48717.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. 8004] gi|167732861|emb|CAP51055.1| Initiation factor IF-3 [Xanthomonas campestris pv. campestris] Length = 159 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 26 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P+ E Sbjct: 86 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRPRLE 145 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 146 GRQMVMMIAPK 156 >gi|56552802|ref|YP_163641.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ZM4] gi|61213066|sp|Q5NL80|IF3_ZYMMO RecName: Full=Translation initiation factor IF-3 gi|56544376|gb|AAV90530.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ZM4] Length = 179 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+K+RP I Sbjct: 46 MEQAQEVGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKTQKTQEIKEIKLRPNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K I FL DG KVK++++FRGRE+ H LG +++ ++ EI++++ P Sbjct: 106 DQHDYDTKMKKIVQFLEDGDKVKVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHP 165 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 166 RMEGRQMLMVVAPK 179 >gi|292670653|ref|ZP_06604079.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541] gi|292647680|gb|EFF65652.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541] Length = 188 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 90/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPNAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + +R G++ ++ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSDRLGDLVTVERGA 150 Query: 121 KFEGRQMIMILS 132 K EG+ M MILS Sbjct: 151 KLEGKNMTMILS 162 >gi|325917698|ref|ZP_08179889.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas vesicatoria ATCC 35937] gi|325536092|gb|EGD07897.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas vesicatoria ATCC 35937] Length = 154 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 21 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 80 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P+ E Sbjct: 81 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRPRLE 140 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 141 GRQMVMMIAPK 151 >gi|24211783|sp|Q8P7Z3|IF3_XANCP RecName: Full=Translation initiation factor IF-3 Length = 182 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 49 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 108 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P+ E Sbjct: 109 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRPRLE 168 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 169 GRQMVMMIAPK 179 >gi|309378778|emb|CBX22604.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 134 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 90/132 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P+ Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPRM 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPK 132 >gi|258544547|ref|ZP_05704781.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC 15826] gi|258520178|gb|EEV89037.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC 15826] Length = 135 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E +LDLVE+ ++ P VC+I+D K R+ QK EARK QK IKE+K RP Sbjct: 1 MNAAYEQDLDLVEVAANAAPPVCRIMDYGKFRFEQQKKQQEARKNQKRIQIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ ++ FL DG K K++V+FRGRE+ HQ LG+ELL+ I+ E+ ++ + Sbjct: 61 DEGDYQVKLRNLNRFLADGDKAKVTVRFRGREMAHQGLGQELLTRIEADLAEVGVVEQKA 120 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+ + K Sbjct: 121 GMEGRQMVMVFAPK 134 >gi|237653685|ref|YP_002889999.1| translation initiation factor IF-3 [Thauera sp. MZ1T] gi|237624932|gb|ACR01622.1| translation initiation factor IF-3 [Thauera sp. MZ1T] Length = 173 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI P VCK++D K +Y QK A EAR KQK +KEVK+RP Sbjct: 37 LNMAEEAGLDLVEIAPMAVPPVCKLMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D Q+KL+ + FL +G K K++++FRGRE+ HQ+ G L +K E+ +++ P Sbjct: 97 DENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERVKADLEELGQVEQMP 156 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIMI++ K Sbjct: 157 KMEGRQMIMIIAPK 170 >gi|313902056|ref|ZP_07835469.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter subterraneus DSM 13965] gi|313467665|gb|EFR63166.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter subterraneus DSM 13965] Length = 194 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E N+DLVE+ P VC+I+D K +Y K EARK+QK IKEVKMRP I Sbjct: 29 LRMAYERNMDLVEVAPQARPPVCRIMDYGKFKYEQAKRDREARKRQKIVDIKEVKMRPRI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL+ FL DG KVK ++ FRGREI+H DLGR++L + +I+ I+ P Sbjct: 89 DQHDFEVKLRNARRFLEDGDKVKATIMFRGREIVHADLGRQVLERLARAVEDIATIERRP 148 Query: 121 KFEGRQMIMILSSK 134 EGR M M+L+ + Sbjct: 149 VVEGRNMTMVLAPR 162 >gi|85858498|ref|YP_460700.1| translation initiation factor 3 [Syntrophus aciditrophicus SB] gi|85721589|gb|ABC76532.1| translation initiation factor 3 (IF-3) [Syntrophus aciditrophicus SB] Length = 181 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 88/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ S+ TP VC+I+D K RY K ARK Q + +KE+++RP ++ H Sbjct: 50 ARKEGLDLVEVASTSTPPVCRIMDYGKFRYQQSKKLQVARKSQSTIQVKEIRLRPKVEEH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DLQVK+K I FL KVK+SV FRGREI D+GR+LL +IK G+ ID +PK E Sbjct: 110 DLQVKIKHIRKFLEQHDKVKVSVLFRGREIAFTDIGRKLLEDIKNNLGDSCNIDQQPKLE 169 Query: 124 GRQMIMILSSK 134 GR M+M+LS K Sbjct: 170 GRNMVMVLSPK 180 >gi|296117436|ref|ZP_06836024.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC 23769] gi|295976038|gb|EFG82828.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC 23769] Length = 173 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 91/131 (69%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP ID + Sbjct: 43 AYASGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNIDEN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L ++ EI++++ PK E Sbjct: 103 DYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGIKVLERVRSEMDEIAKVEHMPKLE 162 Query: 124 GRQMIMILSSK 134 RQMIM+L+ + Sbjct: 163 NRQMIMVLAPR 173 >gi|317121665|ref|YP_004101668.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter marianensis DSM 12885] gi|315591645|gb|ADU50941.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter marianensis DSM 12885] Length = 196 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E NLDLVE+ P VC+I+D K +Y K EAR++QK IKEVKMRP I Sbjct: 29 LRMAYERNLDLVEVAPQARPPVCRIMDYGKYKYEQAKRDREARRRQKIVDIKEVKMRPRI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL+ FL DG KVK ++ FRGREI+H DLGR++L + + +I+ ++ P Sbjct: 89 DQHDFEVKLRNARRFLEDGDKVKATIMFRGREIVHADLGRQVLERLAKAVEDIATVERRP 148 Query: 121 KFEGRQMIMILSSK 134 EGR M M+L+ + Sbjct: 149 VVEGRNMTMVLAPR 162 >gi|71083145|ref|YP_265864.1| translation initiation factor IF-3 [Candidatus Pelagibacter ubique HTCC1062] gi|91762424|ref|ZP_01264389.1| translation initiation factor [Candidatus Pelagibacter ubique HTCC1002] gi|71062258|gb|AAZ21261.1| translation initiation factor IF-3 [Candidatus Pelagibacter ubique HTCC1062] gi|91718226|gb|EAS84876.1| translation initiation factor [Candidatus Pelagibacter ubique HTCC1002] Length = 181 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 88/131 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDL+EI + P VCKI+D+ K +Y QK A A+KKQK +KE+KMRPV Sbjct: 48 ISMAKEQGLDLIEIAPNAKPPVCKIIDMGKFKYDAQKKANVAKKKQKIVLLKEIKMRPVT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K F+ G KVK +++F+GRE+ H LGREL+ IK +I +++ P Sbjct: 108 ETHDYDFKVKNAKKFIGKGDKVKFTIRFKGRELQHSHLGRELMDKIKADMQDIGKVELHP 167 Query: 121 KFEGRQMIMIL 131 KF+G+QMIM++ Sbjct: 168 KFDGKQMIMVI 178 >gi|149912409|ref|ZP_01900952.1| translation initiation factor IF-3 [Moritella sp. PE36] gi|149804512|gb|EDM64601.1| translation initiation factor IF-3 [Moritella sp. PE36] Length = 146 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVEI + P VC+++D K Y K+ E +KKQ +KE+K RP Sbjct: 11 LAIAEEANLDLVEISPNAEPPVCRVMDYGKFIYEKSKSVKEQKKKQVRVQVKEIKFRPGT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G K KI+++FRGRE+ HQ LG +LL+ IKE EI+ ++ P Sbjct: 71 DIGDYQVKLRNLTRFLEEGNKAKITLRFRGREMAHQSLGFDLLNRIKEDLKEIAVVEAFP 130 Query: 121 KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 131 KMEGRQAVMVLAPK 144 >gi|187477892|ref|YP_785916.1| translation initiation factor IF-3 [Bordetella avium 197N] gi|115422478|emb|CAJ49003.1| translation initiation factor IF-3 [Bordetella avium 197N] Length = 165 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++A++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQADVDLVEIAPNADPPVCRLMDFGKFKYQEQKRQAEARSKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLTELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMVLAPK 153 >gi|21243324|ref|NP_642906.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv. citri str. 306] gi|78048350|ref|YP_364525.1| translation initiation factor IF-3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|21108866|gb|AAM37442.1| initiation factor IF-3 [Xanthomonas axonopodis pv. citri str. 306] gi|78036780|emb|CAJ24473.1| Initiation factor IF-3 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 159 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 26 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P+ E Sbjct: 86 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLE 145 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 146 GRQMVMMIAPK 156 >gi|58582809|ref|YP_201825.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624683|ref|YP_452055.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711589|ref|ZP_02242796.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188577598|ref|YP_001914527.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427403|gb|AAW76440.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368623|dbj|BAE69781.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522050|gb|ACD59995.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 159 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 26 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P+ E Sbjct: 86 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDEIVIESRPRLE 145 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 146 GRQMVMMIAPK 156 >gi|294626196|ref|ZP_06704802.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667580|ref|ZP_06732795.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927168|ref|ZP_08188431.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas perforans 91-118] gi|292599548|gb|EFF43679.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292602700|gb|EFF46136.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325542481|gb|EGD13960.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas perforans 91-118] Length = 147 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 14 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P+ E Sbjct: 74 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLE 133 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 134 GRQMVMMIAPK 144 >gi|24211784|sp|Q8PJE2|IF3_XANAC RecName: Full=Translation initiation factor IF-3 Length = 182 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 49 AEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 108 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P+ E Sbjct: 109 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLE 168 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 169 GRQMVMMIAPK 179 >gi|330994119|ref|ZP_08318047.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1] gi|329758586|gb|EGG75102.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1] Length = 193 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A LDL+EI + P V K+LD K +Y QK EARKKQK IKEVK+RP ID + Sbjct: 63 AYSVGLDLLEISPNAEPPVAKVLDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNIDEN 122 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L I+ E+++++ PK E Sbjct: 123 DYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGVKVLERIRTEMDELAKVEHMPKLE 182 Query: 124 GRQMIMILSSK 134 RQMIM+L+ + Sbjct: 183 NRQMIMVLAPR 193 >gi|121535636|ref|ZP_01667442.1| translation initiation factor IF-3 [Thermosinus carboxydivorans Nor1] gi|121305806|gb|EAX46742.1| translation initiation factor IF-3 [Thermosinus carboxydivorans Nor1] Length = 167 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVE+ P VC+I+D K +Y QK EA+KKQK +KEVK+RP I Sbjct: 31 LRLAGEQQLDLVEVAPQAKPPVCRIMDFGKFKYEQQKRDKEAKKKQKIITVKEVKIRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL DG KVK+++ FRGRE+ H +LG+++L+ + I+ ++ EP Sbjct: 91 EEHDFNVKIKHAQRFLEDGDKVKVTIMFRGRELSHPELGKQVLTKMANELKNIAAVEREP 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ MIMIL+ K Sbjct: 151 KLEGKNMIMILAPKT 165 >gi|306842770|ref|ZP_07475412.1| translation initiation factor IF-3 [Brucella sp. BO2] gi|306287114|gb|EFM58619.1| translation initiation factor IF-3 [Brucella sp. BO2] Length = 109 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 83/109 (76%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +DL KL+Y QK A EARKKQK+ IKE+KMRP ID HD +VK+KA F +G KVK++ Sbjct: 1 MDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ+LG +LL +KE EI++++ EPK EGRQM+M+L+ + Sbjct: 61 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAPR 109 >gi|323141059|ref|ZP_08075964.1| translation initiation factor IF-3 [Phascolarctobacterium sp. YIT 12067] gi|322414435|gb|EFY05249.1| translation initiation factor IF-3 [Phascolarctobacterium sp. YIT 12067] Length = 167 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLVEI + P VC+I+D K RY QK EARKKQK+ IKEVK+RP I Sbjct: 31 LKLALENHLDLVEIAPTAKPPVCRIMDYGKYRYEQQKREKEARKKQKTFDIKEVKLRPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK K FL DG KVK+++ FRGRE+ H +LG LL+ + ++ EI+ ++ P Sbjct: 91 EDHDFNVKYKNAVRFLEDGDKVKVTIMFRGRELSHPELGEVLLNRMAQQLKEIAVVERVP 150 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMI++ K Sbjct: 151 KLEGKNMIMIVAPK 164 >gi|289661761|ref|ZP_06483342.1| translation initiation factor IF-3 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668712|ref|ZP_06489787.1| translation initiation factor IF-3 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 159 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 88/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV D Sbjct: 26 ADEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P+ E Sbjct: 86 DYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLE 145 Query: 124 GRQMIMILSSK 134 GRQM+M+++ K Sbjct: 146 GRQMVMMIAPK 156 >gi|51892229|ref|YP_074920.1| translation initiation factor IF-3 [Symbiobacterium thermophilum IAM 14863] gi|51855918|dbj|BAD40076.1| translation initiation factor IF-3 [Symbiobacterium thermophilum IAM 14863] Length = 199 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++AQE LDLVE+ + P VCK++D + +Y K EARKKQK IKEVKMRP I Sbjct: 52 FRIAQERGLDLVEVAPNAKPPVCKLMDYGRYKYEQAKREREARKKQKVITIKEVKMRPNI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+ + + FLRDG KVK ++ FRGRE++H LG+E+L + E +I ++ P Sbjct: 112 DDHDFAVRQRQAESFLRDGDKVKATIMFRGREVVHAQLGKEVLDRLLETVKDICVVERPP 171 Query: 121 KFEGRQMIMILSSKC 135 + EGR MIMIL+ K Sbjct: 172 RLEGRNMIMILAPKA 186 >gi|326402655|ref|YP_004282736.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301] gi|325049516|dbj|BAJ79854.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301] Length = 156 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVEI + P VCK+LD K +Y QK EARKKQK IKE+K+RP ID + Sbjct: 26 AGEVGLDLVEISPNADPPVCKLLDYGKFKYEQQKKKNEARKKQKVIEIKEIKVRPNIDEN 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+A+ F+ DG KVK++++FRGRE+ HQ+LG ++L I+ ++++ PK E Sbjct: 86 DYQVKLRAMKSFIGDGDKVKVTLRFRGREMAHQELGVKVLERIRLDMETDTKVEQMPKME 145 Query: 124 GRQMIMILSSK 134 RQMIM+LS + Sbjct: 146 NRQMIMVLSPR 156 >gi|148259429|ref|YP_001233556.1| translation initiation factor IF-3 [Acidiphilium cryptum JF-5] gi|146401110|gb|ABQ29637.1| bacterial translation initiation factor 3 (bIF-3) [Acidiphilium cryptum JF-5] Length = 144 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVEI + P VCK+LD K +Y QK EARKKQK IKE+K+RP ID + Sbjct: 14 AGEVGLDLVEISPNADPPVCKLLDYGKFKYEQQKKKNEARKKQKVIEIKEIKVRPNIDEN 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+A+ F+ DG KVK++++FRGRE+ HQ+LG ++L I+ ++++ PK E Sbjct: 74 DYQVKLRAMKSFIGDGDKVKVTLRFRGREMAHQELGVKVLERIRLDMETDTKVEQMPKME 133 Query: 124 GRQMIMILSSK 134 RQMIM+LS + Sbjct: 134 NRQMIMVLSPR 144 >gi|258515612|ref|YP_003191834.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans DSM 771] gi|257779317|gb|ACV63211.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans DSM 771] Length = 164 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+E L+LVEI P VC+I+D K +Y K E RKKQ+ +KEVK+RP I Sbjct: 29 MRLAEEKQLELVEIAPQAKPPVCRIMDYGKYKYEQSKREKETRKKQRIISVKEVKLRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK K FL+DG KVK+++ FRGREI+H +LG++LL + E+ +I+ ++ P Sbjct: 89 EEHDFEVKAKNAVRFLKDGDKVKVTIMFRGREIVHTNLGQQLLVKMAEQVKDIATVERHP 148 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 149 KLEGKNMIMILAPK 162 >gi|270290437|ref|ZP_06196662.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4] gi|304384682|ref|ZP_07367028.1| translation initiation factor IF3 [Pediococcus acidilactici DSM 20284] gi|270281218|gb|EFA27051.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4] gi|304328876|gb|EFL96096.1| translation initiation factor IF3 [Pediococcus acidilactici DSM 20284] Length = 166 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLD+V + P V KI+D K R+ QK EARKKQK+ IKE+++ P I Sbjct: 30 IQIAEEANLDVVVVSPKAKPPVAKIMDYGKYRFEQQKKKREARKKQKTVSIKEIRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+D+GR++L + E +I+RI+ P Sbjct: 90 DTNDFNTKLKNAKKFLGKGDKVRVSIRFKGRAITHKDIGRKVLERMAEETSDIARIEARP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ Sbjct: 150 KMDGRSMFLVLAPNA 164 >gi|297617666|ref|YP_003702825.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus DSM 12680] gi|297145503|gb|ADI02260.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus DSM 12680] Length = 157 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A E NLDLVE+ P VC+++D K RY K EARKKQK +KEVKMRP I Sbjct: 18 LQRAIEKNLDLVEVAPGAKPPVCRLMDFGKFRYEQSKRDKEARKKQKVITVKEVKMRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK K FL++G KVK+++ FRGREI H LG+EL E ++ I+ EP Sbjct: 78 DHHDFLVKAKNARRFLQNGDKVKVTIMFRGREISHAQLGQELCMRFAEELSSLASIEREP 137 Query: 121 KFEGRQMIMILSSK 134 + EG+ MIMIL+ + Sbjct: 138 RVEGKNMIMILTPR 151 >gi|261408924|ref|YP_003245165.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|329922246|ref|ZP_08277948.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] gi|261285387|gb|ACX67358.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|328942283|gb|EGG38553.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] Length = 164 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/135 (48%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDLNLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL+DG KVK SV+FRGREI H ++G+++L +K ++ I+ +P Sbjct: 90 EEHDYQTKLRNVVKFLKDGDKVKCSVRFRGREITHANIGQKILERVKTEVADLCVIERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKA 164 >gi|269792335|ref|YP_003317239.1| translation initiation factor IF-3 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099970|gb|ACZ18957.1| translation initiation factor IF-3 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 194 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 90/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ P VCKI+D K R+ QK +ARKKQKS +KE+KMRP I Sbjct: 27 LRMAEERELDLVEVAPLAKPPVCKIMDYGKYRFQQQKRDKDARKKQKSQALKEIKMRPKI 86 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD K+KA+ FL DG +VK+SV FRGRE+ D GRE+L +++ ++ +++ EP Sbjct: 87 DVHDYTFKVKAVRSFLEDGHRVKVSVFFRGREMAFLDRGREVLDRVRKDVEDLGKVEMEP 146 Query: 121 KFEGRQMIMILS 132 + EG M M+++ Sbjct: 147 RMEGSYMRMMIA 158 >gi|163857145|ref|YP_001631443.1| translation initiation factor IF-3 [Bordetella petrii DSM 12804] gi|163260873|emb|CAP43175.1| translation initiation factor IF-3 [Bordetella petrii] Length = 165 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++A++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQADVDLVEIAPNADPPVCRLMDYGKFKYQEQKRQAEARAKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLTELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 140 KLEGRQMVMVLAPR 153 >gi|323702722|ref|ZP_08114383.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans DSM 574] gi|323532385|gb|EGB22263.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans DSM 574] Length = 145 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ P VC+I+D K +Y K EA+KKQ+ +KEVK+RP I Sbjct: 7 LRIAEERQLDLVEVAPQAKPPVCRIMDFGKFKYEQSKREKEAKKKQRIIQVKEVKLRPRI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK+K + FL+DG KVK ++ FRGREI+H +LG+ LL+ + E ++ ++ +P Sbjct: 67 EEHDYQVKVKHAERFLKDGDKVKATIMFRGREIVHTELGQNLLNKLAEDLKDLCTVERQP 126 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 127 KLEGKNMIMILAPK 140 >gi|119945878|ref|YP_943558.1| translation initiation factor IF-3 [Psychromonas ingrahamii 37] gi|119864482|gb|ABM03959.1| bacterial translation initiation factor 3 (bIF-3) [Psychromonas ingrahamii 37] Length = 182 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E++LDLVEI + P VC+I++ K Y K+ E RK QK +KE+K RP Sbjct: 46 LNMAVESDLDLVEISPNAEPPVCRIMNYGKFLYEKTKSVKEQRKNQKQVQLKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G K K+++++RGRE+ HQ LG +LL+ IK EIS ++ P Sbjct: 106 DIGDYQVKLRNLTRFLEEGNKAKVTLRYRGREMAHQSLGIDLLNRIKADLAEISVVESFP 165 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 166 KMEGRQMVMVLGPK 179 >gi|162147244|ref|YP_001601705.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|209544294|ref|YP_002276523.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|161785821|emb|CAP55392.1| Translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|209531971|gb|ACI51908.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] Length = 173 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/131 (49%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP ID + Sbjct: 43 AYAVGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNIDEN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L I+ E ++++ PK E Sbjct: 103 DYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGIKVLERIRTEMDEQAKVEQMPKLE 162 Query: 124 GRQMIMILSSK 134 RQMIM+LS + Sbjct: 163 NRQMIMVLSPR 173 >gi|91205116|ref|YP_537471.1| translation initiation factor IF-3 [Rickettsia bellii RML369-C] gi|91068660|gb|ABE04382.1| Translation initiation factor IF-3 [Rickettsia bellii RML369-C] Length = 147 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/133 (49%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K RY +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNADPPVCKILDFGKFRYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+D+G EL I+ +++ID + Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKDVGEELFKRIEVGLEGLAKIDQQA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|149926878|ref|ZP_01915137.1| Initiation factor 3 [Limnobacter sp. MED105] gi|149824430|gb|EDM83648.1| Initiation factor 3 [Limnobacter sp. MED105] Length = 156 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +DLVEI P V K++D K RY QK A EA+ KQK IKE+K RP Sbjct: 20 LRMAEEGGVDLVEIAPQAVPPVAKLMDYGKFRYQEQKKAAEAKSKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K K++++FRGRE+ HQD+G LL ++ EI +++ P Sbjct: 80 DDGDYNVKLRNLTRFLEDGDKCKVTLRFRGREMAHQDIGARLLERVRTDLEEIGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ + Sbjct: 140 KMEGRQMVMMIAPR 153 >gi|169831542|ref|YP_001717524.1| translation initiation factor IF-3 [Candidatus Desulforudis audaxviator MP104C] gi|169638386|gb|ACA59892.1| translation initiation factor IF-3 [Candidatus Desulforudis audaxviator MP104C] Length = 187 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ S P VC+I+D K +Y K EARKKQ+ IKEVK+RP I Sbjct: 50 LRLAEEKGLDLVEVASQARPVVCRIMDFGKYKYEQSKRDKEARKKQRIITIKEVKLRPGI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + FL+DG KVK+++ FRGREI+H LG++LL + E+ E++ I+ P Sbjct: 110 EDHDFQTKARNAVRFLKDGDKVKVTLVFRGREIVHPHLGQQLLKKLAEQVEELAVIERAP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ + Sbjct: 170 KLEGRNMIMILAPR 183 >gi|296135846|ref|YP_003643088.1| translation initiation factor IF-3 [Thiomonas intermedia K12] gi|295795968|gb|ADG30758.1| translation initiation factor IF-3 [Thiomonas intermedia K12] Length = 144 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ ++DLVEI + +P VC+++D K +Y QK EAR KQK IKEVK RP Sbjct: 8 LRLAEQHDVDLVEIAPTASPPVCRLMDYGKFKYEEQKKNHEARSKQKQIQIKEVKFRPAT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K K+S++FRGREI HQD+G +L +K ++ +++ P Sbjct: 68 DDGDYQIKLRNLRRFLEEGDKGKVSLRFRGREITHQDIGMRVLERVKADVEDVGQVEQMP 127 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM++S K Sbjct: 128 KLEGRQMIMVISPK 141 >gi|255659699|ref|ZP_05405108.1| translation initiation factor IF-3 [Mitsuokella multacida DSM 20544] gi|260848273|gb|EEX68280.1| translation initiation factor IF-3 [Mitsuokella multacida DSM 20544] Length = 174 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK IKEVK+RP I Sbjct: 18 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKYRYEQQKREKEAKKKQKVINIKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK F+ +G KVK+++ FRGRE+ H +LG+E+LS + G+ I+ Sbjct: 78 EQHDFDVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGKEVLSRVAAALGDAVSIERNA 137 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MI++ K Sbjct: 138 KLEGKNMTMIVAPKV 152 >gi|325288436|ref|YP_004264617.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophobotulus glycolicus DSM 8271] gi|324963837|gb|ADY54616.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophobotulus glycolicus DSM 8271] Length = 173 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/133 (50%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A E LDLVEI + P VCK++D K +Y K E RKKQK IKEVK+RP I Sbjct: 35 MQIAGEKELDLVEIAPTAKPPVCKLMDYGKYKYEQAKKDKETRKKQKIVEIKEVKLRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K + FL+DG KVK+++ FRGREIMH + GR L + E G S I+ EP Sbjct: 95 ETHDFETKARNAQRFLQDGDKVKVTIMFRGREIMHPEQGRVLCIRLAEFVGTDSTIEREP 154 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 155 KVEGRNMVMILTP 167 >gi|323339585|ref|ZP_08079859.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC 25644] gi|323092980|gb|EFZ35578.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC 25644] Length = 166 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++ANLDLV + P V KI+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 30 LQMAEQANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVINVKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+++GRE+L E +++ ++ +P Sbjct: 90 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKEIGREVLDRFAEETSDVATVESKP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPKA 164 >gi|294340010|emb|CAZ88374.1| protein chain initiation factor IF-3 [Thiomonas sp. 3As] Length = 165 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ ++DLVEI + +P VC+++D K +Y QK EAR KQK IKEVK RP Sbjct: 29 LRLAEQHDVDLVEIAPTASPPVCRLMDYGKFKYEEQKKNHEARAKQKQIQIKEVKFRPAT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K K+S++FRGREI HQD+G +L +K ++ +++ P Sbjct: 89 DDGDYQIKLRNLRRFLEEGDKGKVSLRFRGREITHQDIGMRVLERVKADVEDVGQVEQMP 148 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM++S K Sbjct: 149 KLEGRQMIMVISPK 162 >gi|329891068|ref|ZP_08269411.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC 11568] gi|328846369|gb|EGF95933.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC 11568] Length = 173 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/127 (48%), Positives = 88/127 (69%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLV+I ++ VCKILD K R+ QK EARK+QK +KE+K+RP ID HD V Sbjct: 47 GLDLVQIVANAETPVCKILDYGKHRFQEQKKKAEARKRQKVVELKEIKLRPNIDTHDYDV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F DG KVK++++FRGRE+ H +LG +L++ ++ F E ++++ PK EGRQM Sbjct: 107 KAKAMHRFFDDGDKVKVTIRFRGREMAHPELGMKLMNKVQADFEEEAKVEFAPKMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|114566617|ref|YP_753771.1| hypothetical protein Swol_1090 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337552|gb|ABI68400.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 179 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/134 (50%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +AQE LDLVE+ S P VC+++D K R+ K EARKKQ+ IKEVKMRP I Sbjct: 31 MDLAQEKELDLVEVAPSAKPPVCRLMDYGKYRFEQSKREKEARKKQRIISIKEVKMRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK K FL G KVK+++ FRGREI H D+G +L + E+ +IS I+ P Sbjct: 91 EEHDFQVKAKNARKFLSGGDKVKLTIMFRGREITHPDIGEKLSLKLTEQLSDISTIEKMP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M+ IL K Sbjct: 151 KVEGRNMVTILVPK 164 >gi|312898389|ref|ZP_07757779.1| translation initiation factor IF-3 [Megasphaera micronuciformis F0359] gi|310620308|gb|EFQ03878.1| translation initiation factor IF-3 [Megasphaera micronuciformis F0359] Length = 167 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 89/131 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A+E +LDLVEI ++ P VC+I++ K RY QK EA+KKQK +KEVK+RP I+ Sbjct: 32 QIAEERHLDLVEIAANAKPPVCRIMNYGKYRYEQQKREKEAKKKQKVLTLKEVKLRPNIE 91 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+KA FL +G KVK+++ FRGRE+ H +LG +LL + E++ ++ PK Sbjct: 92 DHDFYVKMKAAQRFLDEGSKVKVTIMFRGREMSHPELGEKLLIRFADELKEVAHVEKAPK 151 Query: 122 FEGRQMIMILS 132 EGR M M+++ Sbjct: 152 IEGRNMTMVIA 162 >gi|293604690|ref|ZP_06687090.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC 43553] gi|292816859|gb|EFF75940.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC 43553] Length = 167 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQSDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMVLAPK 153 >gi|238650229|ref|YP_002916080.1| translation initiation factor IF-3 [Rickettsia peacockii str. Rustic] gi|238624327|gb|ACR47033.1| translation initiation factor IF-3 [Rickettsia peacockii str. Rustic] Length = 157 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 66/133 (49%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIIVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+SS Sbjct: 140 KMEGKQMIMIVSS 152 >gi|121605746|ref|YP_983075.1| translation initiation factor IF-3 [Polaromonas naphthalenivorans CJ2] gi|120594715|gb|ABM38154.1| bacterial translation initiation factor 3 (bIF-3) [Polaromonas naphthalenivorans CJ2] Length = 174 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI + P VC+++D K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEISPTAVPPVCRLMDYGKFKYAEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLDDGDKCKITLRFRGREITHQELGLALLARIRDELADLILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 144 KLEGRQMVMMIAP 156 >gi|88810666|ref|ZP_01125923.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231] gi|88792296|gb|EAR23406.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231] Length = 177 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+D + P VC++++ K ++ K ARKKQK IKEVK RP Sbjct: 40 LNSAEEAGLDLVELDGNADPPVCRVMNYGKWKFEQSKKQQAARKKQKQVQIKEVKFRPGT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVK++++FRGRE+ HQ+LG ELL ++ E+ I+ P Sbjct: 100 DEGDYQVKLRNLKRFLEDGDKVKVTLRFRGREMAHQELGLELLERVESDLMELGAIEQRP 159 Query: 121 KFEGRQMIMILSSK 134 + EGR M+M+LS K Sbjct: 160 RMEGRLMVMMLSPK 173 >gi|311105447|ref|YP_003978300.1| translation initiation factor IF-3 [Achromobacter xylosoxidans A8] gi|310760136|gb|ADP15585.1| translation initiation factor IF-3 [Achromobacter xylosoxidans A8] Length = 166 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQSDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMVLAPK 153 >gi|310640924|ref|YP_003945682.1| translation initiation factor if-3 [Paenibacillus polymyxa SC2] gi|309245874|gb|ADO55441.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] Length = 165 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA +ANLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDANLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRSNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + + FL +G KVK SV+FRGREI H ++G+++L +K ++ ++ +P Sbjct: 90 EEHDYQTKFRNVVKFLNEGDKVKCSVRFRGREITHANVGQKILERVKTEVADLCTVERQP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|308049558|ref|YP_003913124.1| bacterial translation initiation factor 3 (bIF-3) [Ferrimonas balearica DSM 9799] gi|307631748|gb|ADN76050.1| bacterial translation initiation factor 3 (bIF-3) [Ferrimonas balearica DSM 9799] Length = 172 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA A LDLVEI + P VC+++D K Y K A E RKK K +KE+K RP Sbjct: 36 LDMAAAAELDLVEISPNAEPPVCRVMDYGKFLYEKSKAANEQRKKTKQIQVKELKFRPGT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G KVK++++FRGRE+ HQ LG +LL+ IK+ E+++++ P Sbjct: 96 DVGDYQVKLRNLVRFLEEGDKVKVTLRFRGREMAHQQLGFDLLNRIKDDTAELAQVESFP 155 Query: 121 KFEGRQMIMILSSK 134 K EGRQ IM+L+ K Sbjct: 156 KMEGRQAIMVLAPK 169 >gi|157827551|ref|YP_001496615.1| translation initiation factor IF-3 [Rickettsia bellii OSU 85-389] gi|157802855|gb|ABV79578.1| translation initiation factor IF-3 [Rickettsia bellii OSU 85-389] Length = 147 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNAEPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+D+G EL I+ +++ID + Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKDVGEELFKRIEVGLEGLAKIDQQA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|91787976|ref|YP_548928.1| translation initiation factor 3 [Polaromonas sp. JS666] gi|91697201|gb|ABE44030.1| bacterial translation initiation factor 3 (bIF-3) [Polaromonas sp. JS666] Length = 177 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI + P VC+++D K +Y QK A EA+ KQK IKE+K RP Sbjct: 24 LRLAGEADVDLVEISPTAVPPVCRLMDYGKFKYAEQKKAAEAKSKQKVIEIKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLEEGDKCKITLRFRGREITHQELGLALLARIRDELADLIVVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 144 KLEGRQMVMMIAP 156 >gi|71908289|ref|YP_285876.1| translation initiation factor 3 [Dechloromonas aromatica RCB] gi|71847910|gb|AAZ47406.1| bacterial translation initiation factor 3 (bIF-3) [Dechloromonas aromatica RCB] Length = 137 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 86/131 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVEI + P VC+I+D K +Y QK A EA+ KQK +KE+K+RP D Sbjct: 1 MAEEAGVDLVEIAPTAKPPVCRIMDYGKFKYQEQKRAHEAKLKQKQVQVKEIKLRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q+KL+ + FL +G KVK++++FRGRE+ HQ+ G L IK + ++ PK Sbjct: 61 NDYQIKLRNMTRFLEEGDKVKVTLRFRGREMAHQEFGMRQLERIKADLDAVGAVEQMPKM 120 Query: 123 EGRQMIMILSS 133 EGRQMIMI+ Sbjct: 121 EGRQMIMIIGP 131 >gi|15604388|ref|NP_220904.1| translation initiation factor IF-3 [Rickettsia prowazekii str. Madrid E] gi|6225540|sp|Q9ZD19|IF3_RICPR RecName: Full=Translation initiation factor IF-3 gi|3861080|emb|CAA14980.1| TRANSLATION INITIATION FACTOR IF-3 (infC) [Rickettsia prowazekii] Length = 185 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|269837202|ref|YP_003319430.1| translation initiation factor IF-3 [Sphaerobacter thermophilus DSM 20745] gi|269786465|gb|ACZ38608.1| translation initiation factor IF-3 [Sphaerobacter thermophilus DSM 20745] Length = 204 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ + +P VC+++D K RY + E+RKKQ++ +KEV++RP I Sbjct: 49 LEMARERGLDLVEVQPNASPPVCRLMDYGKFRYEESRRERESRKKQRAVVVKEVRLRPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K + FL+ G KVKI+V FRGREI HQD+G LL+ + E+ ++ +D P Sbjct: 109 DDHDLNTKGRQAYRFLQSGDKVKITVLFRGREIAHQDIGEGLLNRLAEQLAPVAVVDQPP 168 Query: 121 KFEGRQMIMILSSKC 135 EGR M+M+LS K Sbjct: 169 HMEGRTMVMMLSPKA 183 >gi|317403270|gb|EFV83788.1| translation initiation factor IF-3 [Achromobacter xylosoxidans C54] Length = 166 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++ ++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQNDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMVLAPK 153 >gi|292572144|gb|ADE30059.1| Translation initiation factorI F-3 [Rickettsia prowazekii Rp22] Length = 168 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 32 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 92 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 151 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 152 KMEGKQMIMIVSP 164 >gi|308068135|ref|YP_003869740.1| translation initiation factor IF-3 [Paenibacillus polymyxa E681] gi|305857414|gb|ADM69202.1| Translation initiation factor IF-3 [Paenibacillus polymyxa E681] Length = 165 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA +ANLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDANLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRSNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + + FL +G KVK SV+FRGREI H ++G+++L +K ++ ++ +P Sbjct: 90 EEHDYQTKFRNVVKFLNEGDKVKCSVRFRGREITHANVGQKILERVKLEVADLCTVERQP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|94676969|ref|YP_588909.1| translation initiation factor IF-3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220119|gb|ABF14278.1| translation initiation factor IF-3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 171 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/135 (50%), Positives = 94/135 (69%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI S+ P VC+I+D K Y K+ E +KKQK T IKE+K RP I Sbjct: 35 LEKAEEAGVDLVEISSNAEPPVCRIMDYGKFLYEKSKSNKEQKKKQKITHIKEIKFRPGI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVK++ + FL +G KVKI+++FRGRE+ HQ LG E+L+ I+E +I+ ++ P Sbjct: 95 DESDYQVKIRNLMRFLIEGDKVKITLRFRGREMAHQKLGIEVLNRIREDLNDIALLESLP 154 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIMIL+ K Sbjct: 155 NKIEGRQMIMILAPK 169 >gi|15892688|ref|NP_360402.1| translation initiation factor IF-3 [Rickettsia conorii str. Malish 7] gi|34580403|ref|ZP_00141883.1| translation initiation factor IF-3 [Rickettsia sibirica 246] gi|229586780|ref|YP_002845281.1| translation initiation factor IF-3 [Rickettsia africae ESF-5] gi|15619861|gb|AAL03303.1| translation initiation factor IF-3 [Rickettsia conorii str. Malish 7] gi|28261788|gb|EAA25292.1| translation initiation factor IF-3 [Rickettsia sibirica 246] gi|228021830|gb|ACP53538.1| Translation initiation factor IF-3 [Rickettsia africae ESF-5] Length = 157 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 140 KMEGKQMIMIVSP 152 >gi|90407012|ref|ZP_01215202.1| translation initiation factor 3 [Psychromonas sp. CNPT3] gi|90311883|gb|EAS39978.1| translation initiation factor 3 [Psychromonas sp. CNPT3] Length = 185 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 85/132 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A + NLDLVEI + P VC+I++ K Y K+A E RKKQ +KE+K RP D Sbjct: 51 LAFDQNLDLVEISPNAEPPVCRIMNYGKFLYEKSKSAKEQRKKQVQVQLKEIKFRPGTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL +G K K+++++RGRE+ HQ LG LL+ IK EIS ++ PK Sbjct: 111 GDYQVKLRNLTRFLTEGNKAKVTLRYRGREMAHQSLGLNLLNRIKADLAEISNVESFPKM 170 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L K Sbjct: 171 EGRQMVMVLGPK 182 >gi|20138491|sp|Q92HK6|IF3_RICCN RecName: Full=Translation initiation factor IF-3 Length = 186 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|51473712|ref|YP_067469.1| translation initiation factor IF-3 [Rickettsia typhi str. Wilmington] gi|61213099|sp|Q68WK5|IF3_RICTY RecName: Full=Translation initiation factor IF-3 gi|51460024|gb|AAU03987.1| translation initiation factor IF-3 [Rickettsia typhi str. Wilmington] Length = 185 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYENKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIISP 181 >gi|315649038|ref|ZP_07902132.1| translation initiation factor IF-3 [Paenibacillus vortex V453] gi|315275719|gb|EFU39073.1| translation initiation factor IF-3 [Paenibacillus vortex V453] Length = 164 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDLNLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL++G KVK SV+FRGREI H ++G+++L +K ++ I+ +P Sbjct: 90 EEHDYQTKLRNVVKFLKEGDKVKCSVRFRGREITHANIGQKILERVKVEVADLCVIERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKA 164 >gi|289523103|ref|ZP_06439957.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503646|gb|EFD24810.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 168 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 85/132 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLVE+ P VC+I+D K RY QK EARKKQK +KE+KMRP I Sbjct: 19 LEMAETRGLDLVEVAPQANPPVCRIMDYGKYRYQQQKRDKEARKKQKVQTVKEIKMRPKI 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KAI FL G +VK+S+ FRGRE+ D GRE+L +K+ + + D +P Sbjct: 79 DEHDYNFKVKAIKDFLGSGHRVKVSIFFRGREMAFLDKGREVLERVKKDCEGLGKADSDP 138 Query: 121 KFEGRQMIMILS 132 K EGR M M+L+ Sbjct: 139 KMEGRYMRMMLA 150 >gi|71275166|ref|ZP_00651453.1| Initiation factor 3 [Xylella fastidiosa Dixon] gi|71898247|ref|ZP_00680421.1| Initiation factor 3 [Xylella fastidiosa Ann-1] gi|170731157|ref|YP_001776590.1| translation initiation factor IF-3 [Xylella fastidiosa M12] gi|71163975|gb|EAO13690.1| Initiation factor 3 [Xylella fastidiosa Dixon] gi|71731986|gb|EAO34043.1| Initiation factor 3 [Xylella fastidiosa Ann-1] gi|167965950|gb|ACA12960.1| translation initiation factor IF-3 [Xylella fastidiosa M12] Length = 147 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 130 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 131 RLEGRQMVMMVAPR 144 >gi|121997231|ref|YP_001002018.1| translation initiation factor IF-3 [Halorhodospira halophila SL1] gi|121588636|gb|ABM61216.1| bacterial translation initiation factor 3 (bIF-3) [Halorhodospira halophila SL1] Length = 156 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 85/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLVEID + P VC+ +D K ++ K ARKKQK +KEVK RP D Sbjct: 23 AENEGLDLVEIDGNADPPVCRAMDYGKFKFEQSKKQQAARKKQKQIQVKEVKFRPGTDEG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG+ LL ++E G++ +D P+ E Sbjct: 83 DFQVKLRNLRRFLEEGDKAKVTIRFRGREMAHQELGKRLLDRLEEELGDVGTVDQRPRME 142 Query: 124 GRQMIMILSSK 134 GR M+M++S + Sbjct: 143 GRLMVMMMSPR 153 >gi|15837339|ref|NP_298027.1| translation initiation factor IF-3 [Xylella fastidiosa 9a5c] gi|9105627|gb|AAF83547.1|AE003916_1 initiation factor IF-3 [Xylella fastidiosa 9a5c] Length = 159 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 142 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 143 RLEGRQMVMMVAPR 156 >gi|33592590|ref|NP_880234.1| translation initiation factor IF-3 [Bordetella pertussis Tohama I] gi|33596581|ref|NP_884224.1| translation initiation factor IF-3 [Bordetella parapertussis 12822] gi|33601134|ref|NP_888694.1| translation initiation factor IF-3 [Bordetella bronchiseptica RB50] gi|39931243|sp|Q7VY63|IF3_BORPE RecName: Full=Translation initiation factor IF-3 gi|39931247|sp|Q7W911|IF3_BORPA RecName: Full=Translation initiation factor IF-3 gi|39931250|sp|Q7WKF6|IF3_BORBR RecName: Full=Translation initiation factor IF-3 gi|33572236|emb|CAE41787.1| translation initiation factor IF-3 [Bordetella pertussis Tohama I] gi|33573282|emb|CAE37263.1| translation initiation factor IF-3 [Bordetella parapertussis] gi|33575569|emb|CAE32647.1| translation initiation factor IF-3 [Bordetella bronchiseptica RB50] gi|332382007|gb|AEE66854.1| translation initiation factor IF-3 [Bordetella pertussis CS] Length = 164 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP Sbjct: 20 FRLSEQSDVDLVEIAPNADPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPAT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ P Sbjct: 80 DEGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLIELAQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 140 KLEGRQMVMVLAPR 153 >gi|157828566|ref|YP_001494808.1| translation initiation factor IF-3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933280|ref|YP_001650069.1| translation initiation factor IF-3 [Rickettsia rickettsii str. Iowa] gi|157801047|gb|ABV76300.1| translation initiation factor IF-3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908367|gb|ABY72663.1| bacterial protein translation initiation factor 3 (IF-3) [Rickettsia rickettsii str. Iowa] Length = 157 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIIVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 140 KMEGKQMIMIVSP 152 >gi|28199782|ref|NP_780096.1| translation initiation factor IF-3 [Xylella fastidiosa Temecula1] gi|28057903|gb|AAO29745.1| initiation factor IF-3 [Xylella fastidiosa Temecula1] Length = 154 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 18 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 78 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 137 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 138 RLEGRQMVMMVAPR 151 >gi|182682532|ref|YP_001830692.1| translation initiation factor IF-3 [Xylella fastidiosa M23] gi|182632642|gb|ACB93418.1| translation initiation factor IF-3 [Xylella fastidiosa M23] gi|307578810|gb|ADN62779.1| translation initiation factor IF-3 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 147 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 130 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 131 RLEGRQMVMMVAPR 144 >gi|157964578|ref|YP_001499402.1| translation initiation factor IF-3 [Rickettsia massiliae MTU5] gi|157844354|gb|ABV84855.1| Translation initiation factor IF-3 [Rickettsia massiliae MTU5] Length = 193 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 56 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KLK I FL+DG KVKIS+ F+GREI+H+++G+ L I+ + +ID Sbjct: 116 SIGDFETKLKKIKEFLKDGDKVKISLWFKGREILHKEVGQALFKRIEIGLAGLVKIDQHA 175 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 176 KMEGKQMIMIVSP 188 >gi|303248735|ref|ZP_07334988.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans JJ] gi|302489900|gb|EFL49828.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans JJ] Length = 161 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP Sbjct: 20 LRMAQEKGLDLVEVAPNADPPVCRIMDFGRFKYQQQKKLQEARKKASTVQLKEIKVRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL +G + K++V FRGREI+H+D G +LS + G++++++ EP Sbjct: 80 DEHDYQTKLKHIRRFLEEGDRCKVTVFFRGREIVHKDRGVLILSRVVADLGDLAKVEQEP 139 Query: 121 KFEGRQMIMILSSK 134 + EGR M M+L+ + Sbjct: 140 RTEGRMMTMLLAPQ 153 >gi|37521325|ref|NP_924702.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421] gi|39931208|sp|Q7NJS6|IF3_GLOVI RecName: Full=Translation initiation factor IF-3 gi|35212322|dbj|BAC89697.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421] Length = 199 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 64 LRIAEERNLDLVVVSEDAQPPVCRIMDYGKYKFEQEKRAKEARKKQHTADVKEVKMRYTI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV+L+ FL+DG KVK ++ FRGREI H +L ++LL + EI + EP Sbjct: 124 GEHDYQVRLRDTIRFLKDGDKVKATIMFRGREIQHANLAKDLLMQLAADSAEIGEVQQEP 183 Query: 121 KFEGRQMIMILSSK 134 EGR MIMILS K Sbjct: 184 SVEGRNMIMILSPK 197 >gi|14194837|sp|Q9PFE1|IF3_XYLFA RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 44 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 104 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 164 RLEGRQMVMMVAPR 177 >gi|218658944|ref|ZP_03514874.1| translation initiation factor IF-3 [Rhizobium etli IE4771] Length = 111 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/108 (57%), Positives = 78/108 (72%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP ID HD +V Sbjct: 1 GLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEV 60 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 K+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI+R Sbjct: 61 KMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAR 108 >gi|16125301|ref|NP_419865.1| translation initiation factor IF-3 [Caulobacter crescentus CB15] gi|221234038|ref|YP_002516474.1| translation initiation factor IF-3 [Caulobacter crescentus NA1000] gi|20138514|sp|Q9A9D9|IF3_CAUCR RecName: Full=Translation initiation factor IF-3 gi|254803485|sp|B8H312|IF3_CAUCN RecName: Full=Translation initiation factor IF-3 gi|13422345|gb|AAK23033.1| translation initiation factor IF-3 [Caulobacter crescentus CB15] gi|220963210|gb|ACL94566.1| bacterial protein translation initiation factor 3 (IF-3) [Caulobacter crescentus NA1000] Length = 173 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/127 (50%), Positives = 89/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID HD V Sbjct: 47 GLDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKVVELKEIKLRPNIDSHDYDV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F +G KVK++++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQM Sbjct: 107 KAKAMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLQKVKADFDEVAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|32129608|sp|Q87AB3|IF3_XYLFT RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 44 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 104 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 164 RLEGRQMVMMVAPR 177 >gi|295690589|ref|YP_003594282.1| translation initiation factor IF-3 [Caulobacter segnis ATCC 21756] gi|295432492|gb|ADG11664.1| translation initiation factor IF-3 [Caulobacter segnis ATCC 21756] Length = 173 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/126 (50%), Positives = 91/126 (72%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID+HD +VK Sbjct: 48 LDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKVVELKEIKLRPNIDVHDYEVK 107 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 K++ F +G KVK++++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQMI Sbjct: 108 AKSMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLLKVKADFDEVAKVEYEPRMEGRQMI 167 Query: 129 MILSSK 134 MIL+ + Sbjct: 168 MILAPR 173 >gi|152980044|ref|YP_001353178.1| translation initiation factor IF-3 [Janthinobacterium sp. Marseille] gi|151280121|gb|ABR88531.1| translation initiation factor IF-3 [Janthinobacterium sp. Marseille] Length = 154 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 18 FRLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKIILVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K+ +++ P Sbjct: 78 DDGDYNIKLRNLIKFLEDGDKTKITLRFRGREMAHQDIGVRMLERLKQDLEPYGQVEQWP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+LS K Sbjct: 138 KMEGRQMIMVLSPK 151 >gi|89054259|ref|YP_509710.1| translation initiation factor IF-3 [Jannaschia sp. CCS1] gi|88863808|gb|ABD54685.1| bacterial translation initiation factor 3 (bIF-3) [Jannaschia sp. CCS1] Length = 221 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/122 (49%), Positives = 81/122 (66%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VEI + P VCKI+D K +Y QK EARKKQK+ IKEVKMRP D HD K+ Sbjct: 97 VEISPNADPPVCKIMDFGKYKYETQKREAEARKKQKTIDIKEVKMRPGTDDHDFNRKVTD 156 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 FL G KVK++++FRGRE+ HQ+LGRE+L + +R I +I+ P+ EGRQM+M++ Sbjct: 157 AVKFLEGGDKVKVTLRFRGREMAHQNLGREMLEKVVDRIEGIGKIESMPRMEGRQMVMMI 216 Query: 132 SS 133 + Sbjct: 217 NP 218 >gi|116492467|ref|YP_804202.1| translation initiation factor 3 [Pediococcus pentosaceus ATCC 25745] gi|116102617|gb|ABJ67760.1| bacterial translation initiation factor 3 (bIF-3) [Pediococcus pentosaceus ATCC 25745] Length = 166 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 87/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EANLD+V + P V KI+D K R+ QK EARKKQK+ IKE+++ P I Sbjct: 30 ISMAEEANLDVVVVSPKAKPPVAKIMDYGKYRFEQQKKQREARKKQKTVSIKEIRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+++GR++L + + +++R++ P Sbjct: 90 DTNDFNTKLKNATKFLSKGDKVRVSIRFKGRAITHKEIGRKVLERMAKETSDVARVEVHP 149 Query: 121 KFEGRQMIMILS 132 K +GR M ++LS Sbjct: 150 KMDGRSMFLVLS 161 >gi|258543037|ref|YP_003188470.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01] gi|329115644|ref|ZP_08244366.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001] gi|256634115|dbj|BAI00091.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01] gi|256637175|dbj|BAI03144.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-03] gi|256640227|dbj|BAI06189.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-07] gi|256643284|dbj|BAI09239.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-22] gi|256646339|dbj|BAI12287.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-26] gi|256649392|dbj|BAI15333.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-32] gi|256652378|dbj|BAI18312.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655436|dbj|BAI21363.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-12] gi|326695072|gb|EGE46791.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001] Length = 162 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 90/131 (68%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A LDL+EI + P V KILD K +Y QK EA+KKQK IKEVK+RP ID + Sbjct: 32 AYSVGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEAKKKQKVIEIKEVKVRPNIDEN 91 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A+ F+ +G KVK++++FRGRE+ HQ+LG ++L I+ E+++++ P+ E Sbjct: 92 DYQVKMRAVKTFIGEGDKVKVTLRFRGREMAHQELGIKVLERIRGEMDEVAKVEQMPRLE 151 Query: 124 GRQMIMILSSK 134 RQMIM+L+ + Sbjct: 152 NRQMIMVLAPR 162 >gi|187931726|ref|YP_001891711.1| translation initiation factor IF-3 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712635|gb|ACD30932.1| translation initiation factor IF-3 [Francisella tularensis subsp. mediasiatica FSC147] Length = 170 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 35 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKRAQAKKNQKQTQVKEVKLRPVT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 95 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 154 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 155 KLEGRQMIMVLGPK 168 >gi|302342264|ref|YP_003806793.1| translation initiation factor IF-3 [Desulfarculus baarsii DSM 2075] gi|301638877|gb|ADK84199.1| translation initiation factor IF-3 [Desulfarculus baarsii DSM 2075] Length = 170 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P VC+++D K +Y K EA+KKQ T +KEVKMRP I Sbjct: 37 LKIAQEAGLDLVEVAPNAAPPVCRVMDYGKYKYEQAKKLQEAKKKQAQTQVKEVKMRPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++ + FL + +VK++V+FRGREI + + G LL+ + E E++ +D P Sbjct: 97 DENDFQVKMRNVQRFLEERNRVKVTVQFRGREIAYAEAGERLLARVAETVQEMASVDAPP 156 Query: 121 KFEGRQMIMILSSK 134 GR M MIL+ K Sbjct: 157 SRMGRLMHMILAPK 170 >gi|104781107|ref|YP_607605.1| translation initiation factor IF-3 [Pseudomonas entomophila L48] gi|123079218|sp|Q1IC14|IF3_PSEE4 RecName: Full=Translation initiation factor IF-3 gi|95110094|emb|CAK14799.1| protein chain initiation factor IF-3 [Pseudomonas entomophila L48] Length = 183 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAQPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDKAKISLRFRGREMAHQELGMELLKRVETDLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPK 180 >gi|58039290|ref|YP_191254.1| protein translation initiation factor 3 [Gluconobacter oxydans 621H] gi|58001704|gb|AAW60598.1| Bacterial protein translation initiation factor 3 (IF-3) [Gluconobacter oxydans 621H] Length = 173 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/127 (48%), Positives = 86/127 (67%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP HD Q Sbjct: 47 GLDLLEISPTAVPPVVKILDYGKFKYEQQKKKNEARKKQKVIEIKEVKVRPGTGEHDFQT 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KLKAI FL +G KVKIS++F+GRE+ HQ+LG ++L I++ E ++++ P+ E RQM Sbjct: 107 KLKAIHSFLDEGDKVKISLRFKGREMAHQELGIKMLERIRQEVEEKAKVEQMPRLENRQM 166 Query: 128 IMILSSK 134 +M+++ + Sbjct: 167 LMVIAPR 173 >gi|56475897|ref|YP_157486.1| translation initiation factor IF-3 [Aromatoleum aromaticum EbN1] gi|61213067|sp|Q5P7X6|IF3_AZOSE RecName: Full=Translation initiation factor IF-3 gi|56311940|emb|CAI06585.1| translation initiation factor IF-3 [Aromatoleum aromaticum EbN1] Length = 173 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/127 (48%), Positives = 83/127 (65%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI P VC+++D K +Y QK A EAR KQK IKEVK+RP D +D Q+ Sbjct: 44 GLDLVEIAPMAQPPVCRVMDFGKFKYQEQKKAHEARLKQKQVQIKEVKLRPATDENDYQI 103 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ+ G L +K EI +++ PK EGRQM Sbjct: 104 KLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERVKADLEEIGQVEQMPKMEGRQM 163 Query: 128 IMILSSK 134 IM++S K Sbjct: 164 IMVISPK 170 >gi|170721152|ref|YP_001748840.1| translation initiation factor IF-3 [Pseudomonas putida W619] gi|229486011|sp|B1J6U5|IF3_PSEPW RecName: Full=Translation initiation factor IF-3 gi|169759155|gb|ACA72471.1| translation initiation factor IF-3 [Pseudomonas putida W619] Length = 183 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPK 180 >gi|148548432|ref|YP_001268534.1| translation initiation factor IF-3 [Pseudomonas putida F1] gi|167034476|ref|YP_001669707.1| translation initiation factor IF-3 [Pseudomonas putida GB-1] gi|37999407|sp|Q88K26|IF3_PSEPK RecName: Full=Translation initiation factor IF-3 gi|166198967|sp|A5W5E0|IF3_PSEP1 RecName: Full=Translation initiation factor IF-3 gi|189028356|sp|B0KKR7|IF3_PSEPG RecName: Full=Translation initiation factor IF-3 gi|148512490|gb|ABQ79350.1| bacterial translation initiation factor 3 (bIF-3) [Pseudomonas putida F1] gi|166860964|gb|ABY99371.1| translation initiation factor IF-3 [Pseudomonas putida GB-1] gi|313499445|gb|ADR60811.1| InfC [Pseudomonas putida BIRD-1] Length = 183 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPK 180 >gi|332653950|ref|ZP_08419694.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16] gi|332517036|gb|EGJ46641.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16] Length = 147 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLV+I + P VCK++D K R+ K EARK Q+ IKE++M P I Sbjct: 7 LRMAEEQNLDLVKISPNAVPPVCKLMDYGKYRFEQTKREKEARKNQRVVEIKEIRMSPSI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VKL+ FL +G + K++V+FRGRE+ H ++G++LL E GE + +D P Sbjct: 67 DVNDFNVKLRNAQKFLSEGNRCKVTVRFRGREMAHTNIGQDLLLKFAESCGETAVMDKSP 126 Query: 121 KFEGRQMIMILSSK 134 K EGR M + LS K Sbjct: 127 KLEGRHMSIFLSPK 140 >gi|157825815|ref|YP_001493535.1| translation initiation factor IF-3 [Rickettsia akari str. Hartford] gi|157799773|gb|ABV75027.1| translation initiation factor IF-3 [Rickettsia akari str. Hartford] Length = 147 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|126215722|sp|Q4ULG2|IF3_RICFE RecName: Full=Translation initiation factor IF-3 Length = 185 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A+LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERASLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGPIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|167645161|ref|YP_001682824.1| translation initiation factor IF-3 [Caulobacter sp. K31] gi|189028352|sp|B0SY03|IF3_CAUSK RecName: Full=Translation initiation factor IF-3 gi|167347591|gb|ABZ70326.1| translation initiation factor IF-3 [Caulobacter sp. K31] Length = 173 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/126 (50%), Positives = 90/126 (71%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID+HD VK Sbjct: 48 LDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKIVELKEIKLRPNIDIHDYDVK 107 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 K++ F +G KVK++++FRGRE+ H +LG +LL +K F EI++++ EP+ EGRQMI Sbjct: 108 AKSMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLLKVKADFDEIAKVEYEPRMEGRQMI 167 Query: 129 MILSSK 134 MIL+ + Sbjct: 168 MILAPR 173 >gi|67459152|ref|YP_246776.1| translation initiation factor IF-3 [Rickettsia felis URRWXCal2] gi|67004685|gb|AAY61611.1| Translation initiation factor IF-3 [Rickettsia felis URRWXCal2] Length = 147 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A+LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERASLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGPIKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|26989189|ref|NP_744614.1| translation initiation factor IF-3 [Pseudomonas putida KT2440] gi|325276811|ref|ZP_08142512.1| translation initiation factor IF-3 [Pseudomonas sp. TJI-51] gi|24984028|gb|AAN68078.1|AE016439_13 translation initiation factor IF-3 [Pseudomonas putida KT2440] gi|324098049|gb|EGB96194.1| translation initiation factor IF-3 [Pseudomonas sp. TJI-51] Length = 177 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 41 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KMEGRQLMMVIAPK 174 >gi|325295460|ref|YP_004281974.1| translation initiation factor IF-3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065908|gb|ADY73915.1| Translation initiation factor IF-3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 174 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVE+ + P VC+I+D K +Y QK EA+KKQK+ +K VK+RP Sbjct: 39 LQLAKEQGLDLVEVSPNANPPVCRIMDYGKYKYQQQKKMHEAKKKQKTIEVKTVKVRPRT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQV++K FL G KVK V FRGRE H +LG L I E +I+ I+ +P Sbjct: 99 DEHDLQVRIKQTRKFLEKGNKVKAVVMFRGREQAHIELGEAQLMKIYEAVQDIAEIEKKP 158 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 159 KKEGRDMIMILAPK 172 >gi|251795320|ref|YP_003010051.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] gi|247542946|gb|ACS99964.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] Length = 193 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA + +LDLV + + P VC+I+D K RY QK EARK QK +KEV R I Sbjct: 57 MQMAIDLSLDLVNVAPTAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDLKEVWFRANI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + + FL +G KVK SV+FRGREI H +G+++L + + EI ++ P Sbjct: 117 DEHDYQTKFRNVVKFLGEGDKVKASVRFRGREIAHAAIGQKILDRLAQEVAEICSVERAP 176 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 177 KLEGRSMIMILAPKS 191 >gi|300767160|ref|ZP_07077072.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180380|ref|YP_003924508.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ST-III] gi|300494979|gb|EFK30135.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045871|gb|ADN98414.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 166 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A+LDLV + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 30 MQIAEDASLDLVLVAPKAKPPVARIMDYGKYRFEQQKKDREARKKQKVVSIKEVRLSPAI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK + FL G KV++S++F+GR I H+D+GR++L+ + E E S ++ P Sbjct: 90 DTNDFNTKLKHAEKFLSKGDKVRVSIRFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLVLAPKT 164 >gi|121610034|ref|YP_997841.1| translation initiation factor IF-3 [Verminephrobacter eiseniae EF01-2] gi|121554674|gb|ABM58823.1| bacterial translation initiation factor 3 (bIF-3) [Verminephrobacter eiseniae EF01-2] Length = 179 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYHIKMRNIRRFLADGDKCKITLRFRGREITHQELGLALLNRIRDELADVIIVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|239905698|ref|YP_002952437.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1] gi|239795562|dbj|BAH74551.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1] Length = 185 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP Sbjct: 44 LRMAQEKGLDLVEVAPNAEPPVCRIMDFGRFKYQQQKKLQEARKKATTVQLKEIKVRPKT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I F+ +G + K++V FRGREI+H+D G +L+ + GE+ +++ EP Sbjct: 104 DEHDYQTKLKHIRRFIEEGDRCKVTVFFRGREIVHKDRGLTILTRVVADLGELIKVEQEP 163 Query: 121 KFEGRQMIMILSSK 134 + EGR M M+L+ + Sbjct: 164 RTEGRMMTMLLAPQ 177 >gi|297583668|ref|YP_003699448.1| translation initiation factor IF-3 [Bacillus selenitireducens MLS10] gi|297142125|gb|ADH98882.1| translation initiation factor IF-3 [Bacillus selenitireducens MLS10] Length = 168 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ A+LDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LEMAQNADLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GRE+L + E +IS I+ +P Sbjct: 91 EEHDFNTKLRNARKFLTKGDKVKAAIRFRGRAITHSEIGREVLMRMAEECKDISTIESKP 150 Query: 121 KFEGRQMIMILS 132 K EGR M +IL+ Sbjct: 151 KMEGRSMFLILA 162 >gi|197106433|ref|YP_002131810.1| translation initiation factor IF-3 protein [Phenylobacterium zucineum HLK1] gi|238690134|sp|B4R9C1|IF3_PHEZH RecName: Full=Translation initiation factor IF-3 gi|196479853|gb|ACG79381.1| translation initiation factor IF-3 protein [Phenylobacterium zucineum HLK1] Length = 173 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/127 (50%), Positives = 90/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARKKQK +KE+K+RP ID HD +V Sbjct: 47 GLDLVEIVPNADPPVCKILDYGKFKFQEQKKKNEARKKQKVVELKEIKLRPNIDQHDYEV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K +++ F +G KVKI+++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQM Sbjct: 107 KARSMHRFFEEGDKVKITLRFRGRELAHPELGMKLLQKVKVDFEEVAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|28378229|ref|NP_785121.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1] gi|254556436|ref|YP_003062853.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1] gi|38257838|sp|Q88WU8|IF3_LACPL RecName: Full=Translation initiation factor IF-3 gi|28271064|emb|CAD63969.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1] gi|254045363|gb|ACT62156.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1] Length = 173 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A+LDLV + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 MQIAEDASLDLVLVAPKAKPPVARIMDYGKYRFEQQKKDREARKKQKVVSIKEVRLSPAI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK + FL G KV++S++F+GR I H+D+GR++L+ + E E S ++ P Sbjct: 97 DTNDFNTKLKHAEKFLSKGDKVRVSIRFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYP 156 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPKT 171 >gi|225181660|ref|ZP_03735100.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT 1] gi|225167641|gb|EEG76452.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT 1] Length = 140 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E NLDLV + S P VC+I+D K ++ K EARK QK+ +KEVK+RP I Sbjct: 5 LRIAGEKNLDLVAVSLSAKPPVCRIMDFGKYKFEQSKREKEARKNQKTITMKEVKVRPNI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKLK FL +G KVK +V FRGREI H +LG++LL I + ++ ++ P Sbjct: 65 EEHDFQVKLKNARRFLENGDKVKATVMFRGREITHPELGQKLLLRIAKDVEDLGNVERVP 124 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 125 KVEGRNMIMILTPKT 139 >gi|193222338|emb|CAL61955.2| Translation initiation factor IF-3 [Herminiimonas arsenicoxydans] Length = 156 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK IKEVK RP Sbjct: 20 FRLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKVILIKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K +++ P Sbjct: 80 DDGDYNIKLRNLIKFLDDGDKTKITLRFRGREMAHQDIGFRMLERLKADLEPYGQVEQFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+LS K Sbjct: 140 KMEGRQMIMVLSPK 153 >gi|83594817|ref|YP_428569.1| translation initiation factor 3 [Rhodospirillum rubrum ATCC 11170] gi|83577731|gb|ABC24282.1| bacterial translation initiation factor 3 (bIF-3) [Rhodospirillum rubrum ATCC 11170] Length = 173 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/131 (51%), Positives = 92/131 (70%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ A LDLVEI + P VCKILDL K +Y QK EA+KKQK IKE+K+RP ID H Sbjct: 43 AEAAGLDLVEISPNAEPPVCKILDLGKFKYEAQKKKNEAKKKQKVIEIKEIKLRPNIDEH 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A FL +G KVK++++FRGRE+ HQDLG +L + E ++++++ PK E Sbjct: 103 DYDVKMRAAKRFLEEGDKVKVTMRFRGREMAHQDLGMNVLKRVSEDVADLAKVEQHPKLE 162 Query: 124 GRQMIMILSSK 134 GRQMIM+++ K Sbjct: 163 GRQMIMVMAPK 173 >gi|167629866|ref|YP_001680365.1| translation initiation factor if-3 [Heliobacterium modesticaldum Ice1] gi|167592606|gb|ABZ84354.1| translation initiation factor if-3 [Heliobacterium modesticaldum Ice1] Length = 181 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE+NLDLVE+ + P VC+I+D K ++ K EARKKQK IKEVK+RP I Sbjct: 18 LRIAQESNLDLVEVAPTARPPVCRIMDYGKYKFEQSKREREARKKQKIVSIKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K + FL DG KVK+++ FRGREI H +LGR+L + E S ++ + Sbjct: 78 EDHDFDTKARNAIRFLEDGDKVKVTIMFRGREITHPELGRQLCVRLAEVCRPYSNVERDA 137 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 138 KVEGRNMIMILAPKA 152 >gi|160946417|ref|ZP_02093626.1| hypothetical protein PEPMIC_00377 [Parvimonas micra ATCC 33270] gi|158447533|gb|EDP24528.1| hypothetical protein PEPMIC_00377 [Parvimonas micra ATCC 33270] Length = 134 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA E LDLV I + P VCKILD K RY K E+RKKQK +KE+++ P ID Sbjct: 1 MANEKKLDLVNISPNANPPVCKILDYGKYRYDSLKKEKESRKKQKVINVKEIRLTPSIDK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD++VK K + FL+ G KVK+SV+FRGRE+ H D+G+ +L KE E ++ + Sbjct: 61 HDIEVKAKHANNFLKAGDKVKVSVRFRGRELGHTDIGKVVLDKFKELTQEFGNVEKDSVM 120 Query: 123 EGRQMIMILSSK 134 EGR M M LS K Sbjct: 121 EGRNMTMFLSPK 132 >gi|134095005|ref|YP_001100080.1| protein chain initiation factor IF-3 [Herminiimonas arsenicoxydans] Length = 154 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK IKEVK RP Sbjct: 18 FRLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKVILIKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K +++ P Sbjct: 78 DDGDYNIKLRNLIKFLDDGDKTKITLRFRGREMAHQDIGFRMLERLKADLEPYGQVEQFP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+LS K Sbjct: 138 KMEGRQMIMVLSPK 151 >gi|114328277|ref|YP_745434.1| protein translation initiation factor 3 [Granulibacter bethesdensis CGDNIH1] gi|114316451|gb|ABI62511.1| bacterial Protein Translation Initiation Factor 3 (IF-3) [Granulibacter bethesdensis CGDNIH1] Length = 173 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/131 (45%), Positives = 88/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A LDL+EI + P V KILD K +Y QK EARK+QK IKE+K+RP ID + Sbjct: 43 AYAVGLDLLEISPNAEPPVVKILDYGKFKYEQQKKKNEARKRQKVIEIKEIKVRPNIDEN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK++A+ F+ +G KVK++++FRGRE+ HQ+LG +L I+E ++++ PK E Sbjct: 103 DYQVKMRAMRSFISEGDKVKVTLRFRGREMAHQELGARVLQRIREELDAETKVEQMPKME 162 Query: 124 GRQMIMILSSK 134 RQM+M+L+ + Sbjct: 163 NRQMVMVLAPR 173 >gi|332525937|ref|ZP_08402078.1| translation initiation factor 3 [Rubrivivax benzoatilyticus JA2] gi|332109488|gb|EGJ10411.1| translation initiation factor 3 [Rubrivivax benzoatilyticus JA2] Length = 156 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 20 LRMAGELDVDLVEIAATADPPVCRLMDYGKFKYQEQKKAAEAKSKQKVIEVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 D D +K++ + F+ DG K K++++FRGREI HQD+G LL I++ +++ ++ Sbjct: 80 DEGDYAIKMRNLRRFIAEDGDKGKVTLRFRGREITHQDIGMRLLERIRDELADVAVVEHM 139 Query: 120 PKFEGRQMIMILSSK 134 PK EGRQMIM+L+ K Sbjct: 140 PKLEGRQMIMVLAPK 154 >gi|284053146|ref|ZP_06383356.1| translation initiation factor IF-3 [Arthrospira platensis str. Paraca] gi|291570597|dbj|BAI92869.1| translation initiation factor IF-3 [Arthrospira platensis NIES-39] Length = 181 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE LDLV + P VC+I+D K +Y +K EARKKQ + +KEVKMR I Sbjct: 43 MKLAQEKELDLVLVSDKADPPVCRIMDYGKFKYEQEKKVREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L RELL + E E + + P Sbjct: 103 DDHDYQVRVNQAKRFLKSGDKVKATIMFRGREIQHSNLARELLKRMAEDLEEHAEVQQSP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+L+ K Sbjct: 163 KQEGRSMMMLLAPK 176 >gi|254429698|ref|ZP_05043405.1| translation initiation factor IF-3 [Alcanivorax sp. DG881] gi|196195867|gb|EDX90826.1| translation initiation factor IF-3 [Alcanivorax sp. DG881] Length = 186 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI P VC+I+D K + ++ A E RKKQ+ T +KE+K RP Sbjct: 47 LEKATSQQLDLVEISPGAEPPVCRIMDYGKHLFEAKQKAKEGRKKQRQTQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D +VKL+ + FL G K KI+++FRGRE+ HQ+LGRELL+ +++ E + ++ P Sbjct: 107 DVGDYEVKLRNLIRFLEAGDKTKITIRFRGREMAHQELGRELLARVEKDLEEYAHVEQRP 166 Query: 121 KFEGRQMIMILS 132 EGRQMIM+L Sbjct: 167 NMEGRQMIMVLG 178 >gi|194289384|ref|YP_002005291.1| translation initiation factor if-3 [Cupriavidus taiwanensis LMG 19424] gi|193223219|emb|CAQ69224.1| Translation initiation factor IF-3 [Cupriavidus taiwanensis LMG 19424] Length = 140 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + TP V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 4 LRLAEDKDLDLVEIAPNATPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K EI +++ P Sbjct: 64 DDGDYNVKLRNLKRFLEDGDKTKITLRFRGREMAHQEIGARMLERLKADLEEIGQVEQMP 123 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 124 KMEGRQMVMVLAPK 137 >gi|237745471|ref|ZP_04575951.1| translation initiation factor IF-3 [Oxalobacter formigenes HOxBLS] gi|229376822|gb|EEO26913.1| translation initiation factor IF-3 [Oxalobacter formigenes HOxBLS] Length = 156 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A+EA++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 20 FKLAEEADVDLVEIAPNARPPVCRLMDYGKFKYAEQKKAHEAKLKQKVISVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K K++++FRGRE+ HQD+G +L +K+ +++ P Sbjct: 80 DEGDYNIKLRNLIKFLEDGDKCKVTLRFRGREMAHQDIGFRMLERLKQDLDPYGQVEQFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 140 KMEGRQMVMVLAPR 153 >gi|134299470|ref|YP_001112966.1| translation initiation factor IF-3 [Desulfotomaculum reducens MI-1] gi|134052170|gb|ABO50141.1| bacterial translation initiation factor 3 (bIF-3) [Desulfotomaculum reducens MI-1] Length = 145 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ + P VC+I+D K +Y K EA+K+Q+ +KEVK+RP I Sbjct: 7 LRLAEEKQLDLVEVAAQAKPPVCRIMDYGKFKYEQSKREKEAKKRQRIIQVKEVKLRPRI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K K + FL+DG KVK+++ FRGREI+H +LGR LL + + +I ++ P Sbjct: 67 EDHDYSTKSKNAERFLKDGDKVKVTIMFRGREIVHTELGRALLERLAQDLKDICIVERHP 126 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 127 KLEGKNMIMILAPK 140 >gi|293376472|ref|ZP_06622701.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909] gi|325842041|ref|ZP_08167578.1| translation initiation factor IF-3 [Turicibacter sp. HGF1] gi|292644894|gb|EFF62975.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909] gi|325489763|gb|EGC92119.1| translation initiation factor IF-3 [Turicibacter sp. HGF1] Length = 195 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E NLDLV + P VC+I+D K RY Q++A EARK Q +KEV++ P I Sbjct: 60 LRAASEQNLDLVCVAPQANPIVCRIMDYGKYRYEQQRHAREARKNQVVVSLKEVRLSPNI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KVK+SV+F+GREI H + GR +L+ E EI+ ++ P Sbjct: 120 DQHDFNTKLKNAQKFLSKGDKVKVSVRFKGREIAHTEFGRNVLTRFAEGCAEIADLESNP 179 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 180 KLDGRSMFLVLAPK 193 >gi|148544465|ref|YP_001271835.1| translation initiation factor 3 [Lactobacillus reuteri DSM 20016] gi|184153830|ref|YP_001842171.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112] gi|227363107|ref|ZP_03847242.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3] gi|325682787|ref|ZP_08162303.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A] gi|148531499|gb|ABQ83498.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus reuteri DSM 20016] gi|183225174|dbj|BAG25691.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112] gi|227071825|gb|EEI10113.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3] gi|324977137|gb|EGC14088.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A] Length = 170 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEEANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTITVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV+IS++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRISLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAPAA 165 >gi|114319928|ref|YP_741611.1| translation initiation factor 3 [Alkalilimnicola ehrlichii MLHE-1] gi|114226322|gb|ABI56121.1| bacterial translation initiation factor 3 (bIF-3) [Alkalilimnicola ehrlichii MLHE-1] Length = 146 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 58/127 (45%), Positives = 87/127 (68%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVE+D++ P VC+I+D K ++ K A ARKKQK +KEVK RP D D +V Sbjct: 17 GMDLVELDANAKPPVCRIMDYGKFKFEQSKKAQAARKKQKQIQVKEVKFRPGTDEGDYKV 76 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL DG K K++++FRGRE+ HQDLG +LL+ +++ +I+ +D PK EGR M Sbjct: 77 KLRNLRRFLEDGDKAKVTLRFRGREMAHQDLGLKLLNRVEQDLEDIATVDQRPKMEGRLM 136 Query: 128 IMILSSK 134 +M++S + Sbjct: 137 VMMMSPR 143 >gi|294101705|ref|YP_003553563.1| translation initiation factor IF-3 [Aminobacterium colombiense DSM 12261] gi|293616685|gb|ADE56839.1| translation initiation factor IF-3 [Aminobacterium colombiense DSM 12261] Length = 178 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLVE+ VC+ILD K RY +QK +ARKKQK +KE+KMRP I Sbjct: 23 LRMAEERNLDLVEVAPQAKVPVCRILDYGKYRYQLQKKEKDARKKQKGQTLKEIKMRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KA+ FL+ G +VK+S+ FRGRE+ D GR +L+ + + +++ EP Sbjct: 83 DEHDYNFKVKAVMNFLKCGHRVKVSIFFRGREMAFLDKGRNVLARVVHDTESLGKVEAEP 142 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 143 RMEGRYMRMMLTP 155 >gi|284048034|ref|YP_003398373.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM 20731] gi|283952255|gb|ADB47058.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM 20731] Length = 177 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI P VC+I+D K Y QK EARK+Q++ +KEVK+R I Sbjct: 41 LHLAEEKHLDLVEIAPKAKPPVCRIMDYGKYLYEQQKREKEARKRQRTIDVKEVKLRIRI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK K FL+ G KVK+++ FRGRE+ H +LG +LL+ + ++ EI+ ++ +P Sbjct: 101 EDHDFEVKTKNAIRFLQGGDKVKVTIMFRGREMTHPELGEQLLNRMADQLQEIATVERKP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMI++ K Sbjct: 161 KLEGRNMIMIVAPKS 175 >gi|110834702|ref|YP_693561.1| translation initiation factor IF-3 [Alcanivorax borkumensis SK2] gi|110647813|emb|CAL17289.1| Translation initiation factor IF-3 [Alcanivorax borkumensis SK2] Length = 186 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI P VC+I+D K + ++ A E RKKQ+ T +KE+K RP Sbjct: 47 LEKATSKQLDLVEISPGAEPPVCRIMDYGKHLFEAKQKAKEGRKKQRQTQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+ + FL G K KI+V+FRGRE+ HQ+LGRELL+ I++ E ++ P Sbjct: 107 DIGDYDVKLRNLIRFLEAGDKAKITVRFRGREMAHQELGRELLARIEKDLEEYGSVEQRP 166 Query: 121 KFEGRQMIMILS 132 EGRQMIM+L Sbjct: 167 NMEGRQMIMVLG 178 >gi|194466647|ref|ZP_03072634.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23] gi|227543932|ref|ZP_03973981.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A] gi|300909681|ref|ZP_07127142.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112] gi|194453683|gb|EDX42580.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23] gi|227186083|gb|EEI66154.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A] gi|300893546|gb|EFK86905.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112] Length = 170 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEEANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTITVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV+IS++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRISLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAPAA 165 >gi|83590593|ref|YP_430602.1| translation initiation factor 3 [Moorella thermoacetica ATCC 39073] gi|83573507|gb|ABC20059.1| bacterial translation initiation factor 3 (bIF-3) [Moorella thermoacetica ATCC 39073] Length = 154 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +DLVE+ + P VC+I+D K +Y K EARKKQ+ IKEVK+R I Sbjct: 20 LRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKREREARKKQRIINIKEVKLRLNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK + FL+DG KVK+++ FRGREI H DLG +L + ++ +++ I+ P Sbjct: 80 EEHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLKLCQRVADQVADLASIEKPP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MIL+ K Sbjct: 140 KVEGRNMTMILAPKS 154 >gi|332284529|ref|YP_004416440.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7] gi|330428482|gb|AEC19816.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7] Length = 163 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q++++ +DLVEI + P VC+++D K +Y QK EA+ KQK +KEVK RP Sbjct: 20 LQLSEQHEVDLVEIAPNAAPPVCRLMDYGKFKYQEQKRQQEAKAKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + F+ +G K K++++FRGRE+ HQ+LG +L +++ E+ +++ P Sbjct: 80 DEGDYQVKLRNLRRFIEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLAELCQVEAMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 140 KLEGRQMVMVLAPR 153 >gi|255019924|ref|ZP_05291998.1| Translation initiation factor 3 [Acidithiobacillus caldus ATCC 51756] gi|254970583|gb|EET28071.1| Translation initiation factor 3 [Acidithiobacillus caldus ATCC 51756] Length = 145 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ A+LDLVEI P VC+I+D K R+ K EAR+KQK + +KE+K RP D Sbjct: 13 AESADLDLVEIAPQANPPVCRIMDYGKYRFQESKRQHEARRKQKQSQVKEIKFRPRTDDA 72 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q+KL+ I FL DG +VKI+++FRGRE+ H +LG E+L+ +++ E+ ++ P+ E Sbjct: 73 DYQIKLRNIVRFLEDGDRVKITLRFRGREMTHPELGMEVLNRVEKDLLEMGVVEQRPRME 132 Query: 124 GRQMIMILSSK 134 GRQM+M+++ + Sbjct: 133 GRQMVMVIAPR 143 >gi|163795475|ref|ZP_02189442.1| Initiation factor 3 [alpha proteobacterium BAL199] gi|159179461|gb|EDP63992.1| Initiation factor 3 [alpha proteobacterium BAL199] Length = 144 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 95/131 (72%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ + P VCKILD K +Y QK EA+KKQK +KE+KMRP ID H Sbjct: 14 AEQFGLDLVEVSPNADPPVCKILDFGKFKYEAQKKKNEAKKKQKVIEVKEIKMRPNIDDH 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q K+++++ FL DG KVK++++FRGRE+ HQ++G +L +++ GE+++I+ P+ E Sbjct: 74 DYQTKMRSVNRFLEDGDKVKLTMRFRGREMAHQEIGLNVLKRVQDDLGELAKIEAHPRLE 133 Query: 124 GRQMIMILSSK 134 GRQM+M+++ + Sbjct: 134 GRQMVMVVAPR 144 >gi|154500000|ref|ZP_02038038.1| hypothetical protein BACCAP_03657 [Bacteroides capillosus ATCC 29799] gi|150271598|gb|EDM98855.1| hypothetical protein BACCAP_03657 [Bacteroides capillosus ATCC 29799] Length = 200 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLV+I + P VCK++D K ++ QK EARK Q+ IKEV+M P I Sbjct: 60 LEKAMEQGLDLVKISPTAVPPVCKLMDYGKFKFEQQKREKEARKNQRVVEIKEVRMSPGI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ FL DG +VK++V+FRGRE+ H ++G++LL E+ E++ +D +P Sbjct: 120 DVNDFNVKVRNAQKFLADGDRVKVTVRFRGREMAHTEIGKDLLLKFAEQCAEVATLDKDP 179 Query: 121 KFEGRQMIMILSSK 134 K +GR M + LSSK Sbjct: 180 KLDGRHMSIFLSSK 193 >gi|91776354|ref|YP_546110.1| translation initiation factor 3 [Methylobacillus flagellatus KT] gi|91710341|gb|ABE50269.1| bacterial translation initiation factor 3 (bIF-3) [Methylobacillus flagellatus KT] Length = 153 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/131 (45%), Positives = 86/131 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA+ DLVEI +P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 18 AEEADTDLVEIAPQASPPVCRLMDYGKYKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 77 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ + FL++G K K++++FRGREI HQ++G LL ++ E + ++ PK E Sbjct: 78 DYQVKLRNLIRFLQEGDKAKVTLRFRGREITHQEIGLALLRRVEADLAEYAVVEQFPKME 137 Query: 124 GRQMIMILSSK 134 GRQM+M+LS + Sbjct: 138 GRQMVMVLSPQ 148 >gi|312879875|ref|ZP_07739675.1| bacterial translation initiation factor 3 (bIF-3) [Aminomonas paucivorans DSM 12260] gi|310783166|gb|EFQ23564.1| bacterial translation initiation factor 3 (bIF-3) [Aminomonas paucivorans DSM 12260] Length = 229 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVE+ P VC+I+D K R+ QK +ARKKQK+ +KE+KMRP I Sbjct: 53 LQLAEERELDLVEVAPLAKPPVCRIMDYGKYRFQQQKRDKDARKKQKNQSVKEMKMRPKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD K+KA+ FL DG +VK+SV FRGRE+ D GRE+L ++ +++ EP Sbjct: 113 DVHDYTFKVKAVCAFLEDGHRVKVSVFFRGREMAFLDRGREVLDRVRRDIEGFGKVEMEP 172 Query: 121 KFEGRQMIMILSS 133 + EG M M+++ Sbjct: 173 RMEGSYMRMMIAP 185 >gi|300311295|ref|YP_003775387.1| translation initiation factor protein [Herbaspirillum seropedicae SmR1] gi|300074080|gb|ADJ63479.1| translation initiation factor protein [Herbaspirillum seropedicae SmR1] Length = 156 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++EA +DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 20 LRLSEEAEVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G +L +K +++ P Sbjct: 80 DDGDYNIKLRNLTKFLEDGDKTKITLRFRGREMAHQEIGMRMLERLKADLEPYGQVEQFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|283851378|ref|ZP_06368660.1| translation initiation factor IF-3 [Desulfovibrio sp. FW1012B] gi|283573328|gb|EFC21306.1| translation initiation factor IF-3 [Desulfovibrio sp. FW1012B] Length = 140 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/131 (45%), Positives = 85/131 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP D Sbjct: 1 MAQEKGLDLVEVAPNAEPPVCRIMDFGRFKYQQQKKLQEARKKSTTVLLKEIKVRPKTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK I FL +G + K++V FRGREI+H+D G +L + GE ++++ EP+ Sbjct: 61 HDYQTKLKHIRRFLEEGDRCKVTVFFRGREIVHKDRGLIILHRVVADLGETAKVEQEPRT 120 Query: 123 EGRQMIMILSS 133 EGR M M+L+ Sbjct: 121 EGRMMTMLLAP 131 >gi|224367574|ref|YP_002601737.1| InfC [Desulfobacterium autotrophicum HRM2] gi|223690290|gb|ACN13573.1| InfC [Desulfobacterium autotrophicum HRM2] Length = 192 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+E+++DLVE+ + P VCKI+D + +Y + K EARKKQK IKE+K+RP Sbjct: 59 LQKARESHMDLVEVSPNAQPPVCKIMDYGRYKYELTKKHQEARKKQKGFQIKEIKVRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K I F+ + KVK+++ FRGREI R++L + E E ++++ P Sbjct: 119 DSHDLETKVKHIQKFINNRDKVKVTLVFRGREITLSQQARDVLERVAEMTSEFAQVEQFP 178 Query: 121 KFEGRQMIMILSSK 134 KFEGR M M+LS K Sbjct: 179 KFEGRTMTMVLSPK 192 >gi|319778288|ref|YP_004129201.1| Translation initiation factor 3 [Taylorella equigenitalis MCE9] gi|317108312|gb|ADU91058.1| Translation initiation factor 3 [Taylorella equigenitalis MCE9] Length = 142 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/130 (44%), Positives = 87/130 (66%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E + DLVEI + VC+++D K +Y QK EA+ KQK +KE+K RP D Sbjct: 8 AEEEDTDLVEIAPNADVPVCRLMDYGKFKYQEQKRLQEAKSKQKIVQVKEIKFRPGTDEG 67 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ + F+ DG K K++++FRGRE+ HQDLG ++L ++E G++ ++ PKFE Sbjct: 68 DYQVKLRNLKRFIEDGDKAKVTLRFRGREMAHQDLGMKVLERVREDLGDLITVESMPKFE 127 Query: 124 GRQMIMILSS 133 GRQMIM+++ Sbjct: 128 GRQMIMVVAP 137 >gi|114568677|ref|YP_755357.1| translation initiation factor 3 [Maricaulis maris MCS10] gi|114339139|gb|ABI64419.1| bacterial translation initiation factor 3 (bIF-3) [Maricaulis maris MCS10] Length = 201 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/127 (49%), Positives = 93/127 (73%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ + P VCKI+D KL+Y QK EA+KKQK+ IKE+KMRP ID+HD QV Sbjct: 75 GLDLVEVSPNADPPVCKIVDYGKLKYQDQKKKAEAKKKQKTVEIKEIKMRPNIDIHDYQV 134 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F G KVK++++FRGRE+ HQ+ G ++++ +KE F E+++++ EPK EGR M Sbjct: 135 KTKAMHRFFEAGDKVKVTLRFRGREMAHQNRGMDIMNRVKEDFDEVAKVEFEPKLEGRLM 194 Query: 128 IMILSSK 134 +M+++ + Sbjct: 195 VMVMAPR 201 >gi|326317188|ref|YP_004234860.1| translation initiation factor IF-3 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374024|gb|ADX46293.1| translation initiation factor IF-3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 173 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLVDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ++G LL+ I++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQEIGLALLNRIRDDLGDTILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|239814877|ref|YP_002943787.1| translation initiation factor IF-3 [Variovorax paradoxus S110] gi|239801454|gb|ACS18521.1| translation initiation factor IF-3 [Variovorax paradoxus S110] Length = 181 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 91/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVE+ ++ P VC++++ K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEVVAAANPPVCRLIEYGKFKYHEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQ+LG LL I++ G++ ++ P Sbjct: 84 DDGDYNIKMRNIKRFLEEGDKCKITLRFRGREITHQELGLALLQRIRDELGDLIVVEQFP 143 Query: 121 KFEGRQMIMILS 132 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIA 155 >gi|90961471|ref|YP_535387.1| translation initiation factor IF-3 [Lactobacillus salivarius UCC118] gi|90820665|gb|ABD99304.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Lactobacillus salivarius UCC118] Length = 174 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ANLDLV + P V KI+D K R+ +QK EARKKQK IKEV++ P I Sbjct: 38 LKMAEDANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVVNIKEVRLSPTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+D+GR++L+ E +++ ++ + Sbjct: 98 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKDIGRDVLNRFAEATEDVATVESKA 157 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 158 KMDGRSMFLMLAPKT 172 >gi|120611522|ref|YP_971200.1| translation initiation factor 3 [Acidovorax citrulli AAC00-1] gi|120589986|gb|ABM33426.1| bacterial translation initiation factor 3 (bIF-3) [Acidovorax citrulli AAC00-1] Length = 173 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLVDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ++G LL+ I++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQEIGLALLNRIRDDLGDTIVVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|261855918|ref|YP_003263201.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus c2] gi|261836387|gb|ACX96154.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus c2] Length = 190 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/131 (45%), Positives = 88/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVE+ ++ P VCKI+D K ++ K EARKKQK +KE+K RP + H Sbjct: 57 AAEVELDLVEVAANANPPVCKIMDYGKFKFQQSKKLAEARKKQKQIEVKEIKFRPGTEDH 116 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVK+++I FL +G KVKI+++FRGRE+ H+++ LL I++ E++ ++ PK E Sbjct: 117 DYQVKMRSILRFLEEGDKVKITLRFRGREMAHKEVAGVLLDRIEQDLIELATVEQRPKME 176 Query: 124 GRQMIMILSSK 134 GRQ+ M+LS K Sbjct: 177 GRQVTMVLSPK 187 >gi|227890561|ref|ZP_04008366.1| protein translation initiation factor 3 [Lactobacillus salivarius ATCC 11741] gi|301300334|ref|ZP_07206539.1| translation initiation factor IF-3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867499|gb|EEJ74920.1| protein translation initiation factor 3 [Lactobacillus salivarius ATCC 11741] gi|300214323|gb|ADJ78739.1| Translation initiation factor IF-3 [Lactobacillus salivarius CECT 5713] gi|300852070|gb|EFK79749.1| translation initiation factor IF-3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 189 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ANLDLV + P V KI+D K R+ +QK EARKKQK IKEV++ P I Sbjct: 53 LKMAEDANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVVNIKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+D+GR++L+ E +++ ++ + Sbjct: 113 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKDIGRDVLNRFAEATEDVATVESKA 172 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 173 KMDGRSMFLMLAPKT 187 >gi|269925882|ref|YP_003322505.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC BAA-798] gi|269789542|gb|ACZ41683.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC BAA-798] Length = 181 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVE+ + P VC+++D K RY K E+RK QK IKEV+++P I Sbjct: 18 LDLARQKGLDLVEVAPNANPPVCRLMDYGKFRYEQTKKERESRKSQKQIVIKEVRLKPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDLQ K K FL +G KVK++V+FRGRE++H ++G+EL+ + + G+ + I+ +P Sbjct: 78 DVHDLQTKAKQARNFLEEGDKVKVTVQFRGREVVHPEIGQELVQRLMDLIGDAATIEQQP 137 Query: 121 KFEGRQMIMILSSK 134 K +G+ M +L+ + Sbjct: 138 KLDGKNMTALLAPR 151 >gi|294793960|ref|ZP_06759097.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44] gi|294455530|gb|EFG23902.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44] Length = 172 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 99 ENHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|119897371|ref|YP_932584.1| translation initiation factor IF-3 [Azoarcus sp. BH72] gi|119669784|emb|CAL93697.1| translation initiation factor IF-3 [Azoarcus sp. BH72] Length = 156 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/127 (48%), Positives = 83/127 (65%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI P VCKI+D K +Y QK A EAR KQK +KEVK+RP D +D Q+ Sbjct: 27 GLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGTDENDYQI 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ+ G L IK E+ +++ PK EGRQM Sbjct: 87 KLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERIKADLEELGQVEQMPKMEGRQM 146 Query: 128 IMILSSK 134 IM+++ K Sbjct: 147 IMVIAPK 153 >gi|296270015|ref|YP_003652647.1| translation initiation factor IF-3 [Thermobispora bispora DSM 43833] gi|296092802|gb|ADG88754.1| translation initiation factor IF-3 [Thermobispora bispora DSM 43833] Length = 199 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ ++ P VCK++D K +Y A EAR+ Q T +KE+K+RP I Sbjct: 35 LRLAQEADLDLVEVAATARPPVCKLMDYGKWKYESAMKAREARRNQAQTVVKEIKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 95 DPHDYETKKGHVERFLRGGDKVKVTIMFRGREQSRPELGYRLLQRLAEDVAELGYVESQP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 155 KQDGRNMIMVIGP 167 >gi|319794590|ref|YP_004156230.1| translation initiation factor if-3 [Variovorax paradoxus EPS] gi|315597053|gb|ADU38119.1| translation initiation factor IF-3 [Variovorax paradoxus EPS] Length = 182 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVE+ ++ P VC++++ K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEVVAAANPPVCRLIEYGKFKYHEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQ+LG LL I++ G+ ++ P Sbjct: 84 DDGDYNIKMRNIKRFLEEGDKCKITLRFRGREITHQELGLALLQRIRDELGDTIMVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|256751282|ref|ZP_05492162.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus CCSD1] gi|256749837|gb|EEU62861.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus CCSD1] Length = 141 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 8 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 68 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 127 Query: 122 FEGRQMIMILSSK 134 EGR +IM+L+ + Sbjct: 128 MEGRNLIMVLTPR 140 >gi|167037184|ref|YP_001664762.1| translation initiation factor IF-3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307267647|ref|ZP_07549109.1| translation initiation factor IF-3 [Thermoanaerobacter wiegelii Rt8.B1] gi|326391475|ref|ZP_08213010.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus JW 200] gi|166856018|gb|ABY94426.1| translation initiation factor IF-3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306917336|gb|EFN47648.1| translation initiation factor IF-3 [Thermoanaerobacter wiegelii Rt8.B1] gi|325992501|gb|EGD50958.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus JW 200] Length = 141 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 8 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPTIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL++G KVK++++FRGRE H L +LL E I+ P Sbjct: 68 DHDFGVKLKSAIKFLKEGNKVKVTIRFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPN 127 Query: 122 FEGRQMIMILSSKC 135 EGR ++M+L+ K Sbjct: 128 IEGRNLMMVLTPKS 141 >gi|116333672|ref|YP_795199.1| translation initiation factor 3 [Lactobacillus brevis ATCC 367] gi|116099019|gb|ABJ64168.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus brevis ATCC 367] Length = 155 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 87/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLD+V + P V +I+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 18 LQIAEDANLDVVLVAPKAKPPVARIMDYGKYRFELQKKQREARKKQKVVSVKEVRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+D+GRE+L+ + +++ ++ P Sbjct: 78 DTNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKDIGREVLNRMAAETADVATVEQRP 137 Query: 121 KFEGRQMIMILS 132 K +GR M ++LS Sbjct: 138 KMDGRSMFLMLS 149 >gi|27262220|gb|AAN87391.1| protein translation initiation factor 3 [Heliobacillus mobilis] Length = 168 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE NLDLVE+ P VC+I+D K ++ K EARKKQK IKEVK+RP I Sbjct: 17 LRMAQERNLDLVEVAPMAKPPVCRIMDYGKYKFEQSKREREARKKQKIVNIKEVKLRPNI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D K + FL DG KVK+++ FRGREI H +LGR+L + E IS ++ + Sbjct: 77 EDNDFDTKARNAIRFLEDGDKVKVTIMFRGREITHPELGRQLCVRLAEVCKPISNVERDA 136 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 137 KVEGRNMIMILTPKA 151 >gi|240146871|ref|ZP_04745472.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82] gi|257200969|gb|EEU99253.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82] gi|291536060|emb|CBL09172.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia intestinalis M50/1] gi|291538553|emb|CBL11664.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia intestinalis XB6B4] Length = 165 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EARKKQK +KE+++ P I Sbjct: 30 MKLAEEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEARKKQKVVELKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVKI+++FRGRE+ H + + +L + E E++ ++ P Sbjct: 90 DSNDLNTKMNAAKKFLSKGDKVKITLRFRGREMAHMNASKHILDDFAESLAEVAVVEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 150 KVEGRSISMVLAEK 163 >gi|157803732|ref|YP_001492281.1| translation initiation factor IF-3 [Rickettsia canadensis str. McKiel] gi|157784995|gb|ABV73496.1| translation initiation factor IF-3 [Rickettsia canadensis str. McKiel] Length = 147 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLVEI + P VCKILD K +Y +K EARKK K +KE+K +P I Sbjct: 11 LDMADKVGLDLVEISPNAEPPVCKILDFGKFKYESKKRLHEARKKHKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGNKVKISLWFKGREILHKEVGQELFKRIEIGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIISP 143 >gi|89893013|ref|YP_516500.1| hypothetical protein DSY0267 [Desulfitobacterium hafniense Y51] gi|89332461|dbj|BAE82056.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 191 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 85/132 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLVEI + P VCKI+D K +Y K EARKKQK+ IKEVK+RP I+ Sbjct: 56 RIAAEKSLDLVEIAPTAKPPVCKIMDYGKYKYEQAKRDKEARKKQKTMEIKEVKLRPNIE 115 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL DG KVK+++ FRGRE+ H +LGR L + E + I+ +PK Sbjct: 116 DHDFETKARNAQRFLNDGDKVKVTIMFRGREVTHPELGRTLCLRLAEFCKAEANIERDPK 175 Query: 122 FEGRQMIMILSS 133 EGR MIMIL+ Sbjct: 176 LEGRNMIMILAP 187 >gi|282850467|ref|ZP_06259846.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745] gi|282579960|gb|EFB85364.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745] Length = 174 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 41 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 101 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 160 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 161 KLEGRNMTMILVSK 174 >gi|51598451|ref|YP_072639.1| translation initiation factor IF-3 [Borrelia garinii PBi] gi|61213093|sp|Q662H4|IF3_BORGA RecName: Full=Translation initiation factor IF-3 gi|51573022|gb|AAU07047.1| translation initiation factor 3 [Borrelia garinii PBi] Length = 186 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG ++L++I E+ GE++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYDILNSILEKVGEVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|241764279|ref|ZP_04762309.1| translation initiation factor IF-3 [Acidovorax delafieldii 2AN] gi|241366348|gb|EER60878.1| translation initiation factor IF-3 [Acidovorax delafieldii 2AN] Length = 177 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/131 (47%), Positives = 87/131 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ+LG LL+ I++ + I+ P Sbjct: 84 DDGDYNIKMRNIRRFLADGDKCKITLRFRGREITHQELGLALLNRIRDELADSIIIEQFP 143 Query: 121 KFEGRQMIMIL 131 K EGRQMIM++ Sbjct: 144 KLEGRQMIMMI 154 >gi|219684579|ref|ZP_03539522.1| translation initiation factor IF-3 [Borrelia garinii PBr] gi|219685803|ref|ZP_03540612.1| translation initiation factor IF-3 [Borrelia garinii Far04] gi|219671941|gb|EED28995.1| translation initiation factor IF-3 [Borrelia garinii PBr] gi|219672636|gb|EED29666.1| translation initiation factor IF-3 [Borrelia garinii Far04] Length = 186 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG ++L++I E+ GE++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYDILNSILEKVGEVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|253998430|ref|YP_003050493.1| translation initiation factor IF-3 [Methylovorus sp. SIP3-4] gi|253985109|gb|ACT49966.1| translation initiation factor IF-3 [Methylovorus sp. SIP3-4] Length = 174 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/130 (46%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA++DLVEI P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 40 AEEADIDLVEIAPQAQPPVCRLMDYGKFKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 99 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+++ FL++G K KI+++FRGREI HQ+LG LL ++ E + ++ PK E Sbjct: 100 DYQVKLRSLIRFLQEGDKAKITLRFRGREITHQELGLALLKRVEADLQEHAVVEQFPKME 159 Query: 124 GRQMIMILSS 133 GRQM+M+L Sbjct: 160 GRQMVMVLGP 169 >gi|167040677|ref|YP_001663662.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514] gi|289578712|ref|YP_003477339.1| translation initiation factor IF-3 [Thermoanaerobacter italicus Ab9] gi|300914718|ref|ZP_07132034.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561] gi|166854917|gb|ABY93326.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514] gi|289528425|gb|ADD02777.1| translation initiation factor IF-3 [Thermoanaerobacter italicus Ab9] gi|300889653|gb|EFK84799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561] Length = 152 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 19 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 79 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 138 Query: 122 FEGRQMIMILSSK 134 EGR +IM+L+ + Sbjct: 139 MEGRNLIMVLTPR 151 >gi|219666284|ref|YP_002456719.1| translation initiation factor IF-3 [Desulfitobacterium hafniense DCB-2] gi|219536544|gb|ACL18283.1| translation initiation factor IF-3 [Desulfitobacterium hafniense DCB-2] Length = 198 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 85/132 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLVEI + P VCKI+D K +Y K EARKKQK+ IKEVK+RP I+ Sbjct: 63 RIAAEKSLDLVEIAPTAKPPVCKIMDYGKYKYEQAKRDKEARKKQKTMEIKEVKLRPNIE 122 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL DG KVK+++ FRGRE+ H +LGR L + E + I+ +PK Sbjct: 123 DHDFETKARNAQRFLNDGDKVKVTIMFRGREVTHPELGRTLCLRLAEFCKAEANIERDPK 182 Query: 122 FEGRQMIMILSS 133 EGR MIMIL+ Sbjct: 183 LEGRNMIMILAP 194 >gi|313200505|ref|YP_004039163.1| translation initiation factor if-3 [Methylovorus sp. MP688] gi|312439821|gb|ADQ83927.1| translation initiation factor IF-3 [Methylovorus sp. MP688] Length = 154 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/130 (46%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA++DLVEI P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 20 AEEADIDLVEIAPQAQPPVCRLMDYGKFKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+++ FL++G K KI+++FRGREI HQ+LG LL ++ E + ++ PK E Sbjct: 80 DYQVKLRSLIRFLQEGDKAKITLRFRGREITHQELGLALLKRVEADLQEHAVVEQFPKME 139 Query: 124 GRQMIMILSS 133 GRQM+M+L Sbjct: 140 GRQMVMVLGP 149 >gi|302878339|ref|YP_003846903.1| translation initiation factor IF-3 [Gallionella capsiferriformans ES-2] gi|302581128|gb|ADL55139.1| translation initiation factor IF-3 [Gallionella capsiferriformans ES-2] Length = 164 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/136 (43%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI P VC+I+D K +Y K EA+ KQK +KE+K RP Sbjct: 26 LRLAGEAELDLVEISPMADPPVCRIMDFGKFKYAESKKQHEAKLKQKQVQVKEIKFRPGT 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G L+ ++ E + ++ P Sbjct: 86 DDGDYNIKLRNLTKFLLDGDKTKITLRFRGREMAHQEIGMRLIERVRNDLEEYAVVEQFP 145 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQM+M+LS K Sbjct: 146 KMEGRQMVMVLSPKAA 161 >gi|259503613|ref|ZP_05746515.1| initiation factor IF3 [Lactobacillus antri DSM 16041] gi|312868767|ref|ZP_07728959.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3] gi|259168437|gb|EEW52932.1| initiation factor IF3 [Lactobacillus antri DSM 16041] gi|311095753|gb|EFQ54005.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3] Length = 170 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEDANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTVTVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV++S++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRVSLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAPAA 165 >gi|302389961|ref|YP_003825782.1| bacterial translation initiation factor 3 (bIF-3) [Thermosediminibacter oceani DSM 16646] gi|302200589|gb|ADL08159.1| bacterial translation initiation factor 3 (bIF-3) [Thermosediminibacter oceani DSM 16646] Length = 192 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV++ P VCKI+D K +Y K EARK QK IKE++M P I Sbjct: 53 LKIAQERQLDLVKVAPQAKPPVCKIMDYGKYKYEQSKREKEARKNQKVISIKEIRMSPNI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QV++K FL DG KVK++++FRGREI H LG E+L + + E ++ P Sbjct: 113 EEHDFQVRVKNALRFLDDGNKVKVTIRFRGREITHTQLGEEVLKRLADSVKEKGIVEKPP 172 Query: 121 KFEGRQMIMILSSK 134 EGR M+MILS K Sbjct: 173 VIEGRNMVMILSPK 186 >gi|257092826|ref|YP_003166467.1| translation initiation factor IF-3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045350|gb|ACV34538.1| translation initiation factor IF-3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 183 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVEI P VC+I+D K +Y QK EA+ KQK +KEVK RP Sbjct: 47 LSLAEEAGLDLVEIAPMAQPPVCRIVDFGKFKYQEQKRQHEAKLKQKQVQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D Q+KL+ + FL + KVK++++FRGRE+ HQD+G + I+ E++ ++ P Sbjct: 107 DENDYQIKLRNMTRFLEEEDKVKVTLRFRGREMAHQDIGMRQIERIRADLQEMAVVEQMP 166 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 167 KMEGRQMVMVLTP 179 >gi|223889247|ref|ZP_03623835.1| translation initiation factor IF-3 [Borrelia burgdorferi 64b] gi|225549824|ref|ZP_03770788.1| translation initiation factor IF-3 [Borrelia burgdorferi 118a] gi|223885280|gb|EEF56382.1| translation initiation factor IF-3 [Borrelia burgdorferi 64b] gi|225369632|gb|EEG99081.1| translation initiation factor IF-3 [Borrelia burgdorferi 118a] Length = 186 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I GFL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|239947716|ref|ZP_04699469.1| translation initiation factor IF-3 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921992|gb|EER22016.1| translation initiation factor IF-3 [Rickettsia endosymbiont of Ixodes scapularis] Length = 148 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+D KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDRDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG QMIMI+S Sbjct: 131 KMEGNQMIMIVSP 143 >gi|119490629|ref|ZP_01623034.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] gi|119453794|gb|EAW34951.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] Length = 178 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR ID Sbjct: 44 RLAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKRAREAKKKQHNADVKEVKMRYKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD QV+++ + FL+ G KVK ++ FRGREI H +L +ELL+ + GE++ + PK Sbjct: 104 DHDYQVRVRQAERFLKSGDKVKATIMFRGREIQHSNLAKELLNRMATDLGELAEVQQYPK 163 Query: 122 FEGRQMIMILSSK 134 EGR M+M+LS K Sbjct: 164 QEGRTMMMLLSPK 176 >gi|15594535|ref|NP_212324.1| translation initiation factor IF-3 [Borrelia burgdorferi B31] gi|195941921|ref|ZP_03087303.1| translation initiation factor IF-3 [Borrelia burgdorferi 80a] gi|216264263|ref|ZP_03436255.1| translation initiation factor IF-3 [Borrelia burgdorferi 156a] gi|218249678|ref|YP_002374718.1| translation initiation factor IF-3 [Borrelia burgdorferi ZS7] gi|221217563|ref|ZP_03589033.1| translation initiation factor IF-3 [Borrelia burgdorferi 72a] gi|224532816|ref|ZP_03673431.1| translation initiation factor IF-3 [Borrelia burgdorferi WI91-23] gi|224534076|ref|ZP_03674659.1| translation initiation factor IF-3 [Borrelia burgdorferi CA-11.2a] gi|225548524|ref|ZP_03769572.1| translation initiation factor IF-3 [Borrelia burgdorferi 94a] gi|225552487|ref|ZP_03773427.1| translation initiation factor IF-3 [Borrelia sp. SV1] gi|226320901|ref|ZP_03796452.1| translation initiation factor IF-3 [Borrelia burgdorferi 29805] gi|226321508|ref|ZP_03797034.1| translation initiation factor IF-3 [Borrelia burgdorferi Bol26] gi|3913890|sp|O51208|IF3_BORBU RecName: Full=Translation initiation factor IF-3 gi|226707353|sp|B7J1C3|IF3_BORBZ RecName: Full=Translation initiation factor IF-3 gi|2688074|gb|AAC66571.1| translation initiation factor 3 (infC) [Borrelia burgdorferi B31] gi|215980736|gb|EEC21543.1| translation initiation factor IF-3 [Borrelia burgdorferi 156a] gi|218164866|gb|ACK74927.1| translation initiation factor IF-3 [Borrelia burgdorferi ZS7] gi|221192626|gb|EEE18843.1| translation initiation factor IF-3 [Borrelia burgdorferi 72a] gi|224512205|gb|EEF82591.1| translation initiation factor IF-3 [Borrelia burgdorferi WI91-23] gi|224512775|gb|EEF83143.1| translation initiation factor IF-3 [Borrelia burgdorferi CA-11.2a] gi|225370787|gb|EEH00222.1| translation initiation factor IF-3 [Borrelia burgdorferi 94a] gi|225371485|gb|EEH00915.1| translation initiation factor IF-3 [Borrelia sp. SV1] gi|226232697|gb|EEH31450.1| translation initiation factor IF-3 [Borrelia burgdorferi Bol26] gi|226233673|gb|EEH32403.1| translation initiation factor IF-3 [Borrelia burgdorferi 29805] gi|312148032|gb|ADQ30691.1| translation initiation factor IF-3 [Borrelia burgdorferi JD1] gi|312148999|gb|ADQ29070.1| translation initiation factor IF-3 [Borrelia burgdorferi N40] Length = 186 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I GFL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|292493206|ref|YP_003528645.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4] gi|291581801|gb|ADE16258.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4] Length = 165 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA DLVEI P VC+I+D K + K ARKKQK IKEVK RP Sbjct: 31 LRVAEEAGRDLVEIAPQAQPPVCRIMDYGKYLFEESKKRQAARKKQKQIQIKEVKFRPGT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL++G K K+S++FRGRE+ HQ+LG +LL +++ E ++ P Sbjct: 91 EEGDYQVKLRNLVRFLKEGDKAKVSLRFRGRELAHQELGLKLLERVRDDLAEYGTVEQNP 150 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 151 KREGRQMVMVLAPK 164 >gi|302035783|ref|YP_003796105.1| translation initiation factor IF-3 [Candidatus Nitrospira defluvii] gi|300603847|emb|CBK40179.1| Translation initiation factor IF-3 [Candidatus Nitrospira defluvii] Length = 168 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 89/131 (67%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE DLVE+ + P VC+I+D K ++ + K ++R+ QKST +KE+K+RP D H Sbjct: 38 AQEGGYDLVEVAPTSQPPVCRIMDYGKYKFELSKKDHQSRRHQKSTQVKEIKLRPRTDKH 97 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL++K++ I FL DG K K+++ +RGRE+ +Q++GR +++++ + E ++ P+ E Sbjct: 98 DLEIKIRQIKEFLADGNKTKVTLTYRGREMANQEMGRTMMASVIKECTEAGTVEFAPRME 157 Query: 124 GRQMIMILSSK 134 GR +IMIL+ K Sbjct: 158 GRSLIMILAPK 168 >gi|303230813|ref|ZP_07317560.1| translation initiation factor IF-3 [Veillonella atypica ACS-049-V-Sch6] gi|302514573|gb|EFL56568.1| translation initiation factor IF-3 [Veillonella atypica ACS-049-V-Sch6] Length = 184 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 51 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 111 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 170 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 171 KLEGRNMTMILVSK 184 >gi|297544946|ref|YP_003677248.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|307724048|ref|YP_003903799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513] gi|296842721|gb|ADH61237.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|307581109|gb|ADN54508.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513] Length = 183 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 50 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 110 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 169 Query: 122 FEGRQMIMILSSK 134 EGR +IM+L+ + Sbjct: 170 MEGRNLIMVLTPR 182 >gi|291614197|ref|YP_003524354.1| translation initiation factor IF-3 [Sideroxydans lithotrophicus ES-1] gi|291584309|gb|ADE11967.1| translation initiation factor IF-3 [Sideroxydans lithotrophicus ES-1] Length = 172 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI P VC+I+D+ K +Y K EA+ KQK IKE+K RP Sbjct: 37 LRMADEAELDLVEIAPLAEPPVCRIMDIGKFKYAEAKKQHEAKLKQKQVQIKEIKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G +L+ IK E ++ P Sbjct: 97 DEGDYNIKLRNLIKFLGDGDKTKITLRFRGREMAHQEIGMKLIERIKGDLDEYGVVEQFP 156 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 157 KMEGRQMVMVLGPK 170 >gi|17546297|ref|NP_519699.1| translation initiation factor protein [Ralstonia solanacearum GMI1000] gi|20138471|sp|Q8XZ28|IF3_RALSO RecName: Full=Translation initiation factor IF-3 gi|17428594|emb|CAD15280.1| probable translation initiation factor if-3 protein [Ralstonia solanacearum GMI1000] Length = 178 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRTKITLRFRGREMAHQEIGARMLDRLKTDLEEFGQVEQMP 161 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 162 KMEGRQMVMMLAPK 175 >gi|187929056|ref|YP_001899543.1| translation initiation factor IF-3 [Ralstonia pickettii 12J] gi|187725946|gb|ACD27111.1| translation initiation factor IF-3 [Ralstonia pickettii 12J] Length = 173 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A +A+ KQK +KEVK RP Sbjct: 37 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHDAKLKQKVIQVKEVKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL+ FL DG +VK++++FRGRE+ HQ+LG +L IK E +++ P Sbjct: 97 DDNDYGVKLRNATRFLEDGDRVKVTLRFRGREMAHQELGMRVLERIKSDLEEFGQVEQMP 156 Query: 121 KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 157 KMEGRQAVMMLAPK 170 >gi|242278820|ref|YP_002990949.1| translation initiation factor IF-3 [Desulfovibrio salexigens DSM 2638] gi|242121714|gb|ACS79410.1| translation initiation factor IF-3 [Desulfovibrio salexigens DSM 2638] Length = 154 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ LDLVE+ P VCKI+D K +Y QK EA+KKQ IKEVK RP Sbjct: 19 LEIAQDRGLDLVEVAEKANPPVCKIMDYGKFKYQQQKRKQEAKKKQTVIQIKEVKFRPKT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL G + K+++ FRGREI+H+D G +L +KE +IS+++ P Sbjct: 79 DEHDYQTKLKHIRRFLEGGDRCKVTIFFRGREIVHKDRGLAVLERVKEETQDISKMEQAP 138 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 139 RSEGRTMNMMLAP 151 >gi|113867358|ref|YP_725847.1| translation initiation factor 3 [Ralstonia eutropha H16] gi|113526134|emb|CAJ92479.1| translation initiation factor 3 (IF-3) [Ralstonia eutropha H16] Length = 140 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 4 LRLAEDKDLDLVEIAPNAVPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K EI +++ P Sbjct: 64 DDGDYNVKLRNLKRFLEDGDKTKITLRFRGREMAHQEIGARMLERLKADLEEIGQVEQMP 123 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 124 KMEGRQMVMVLAPK 137 >gi|303229418|ref|ZP_07316208.1| translation initiation factor IF-3 [Veillonella atypica ACS-134-V-Col7a] gi|302515954|gb|EFL57906.1| translation initiation factor IF-3 [Veillonella atypica ACS-134-V-Col7a] Length = 182 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 49 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 109 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 169 KLEGRNMTMILVSK 182 >gi|320115602|ref|YP_004185761.1| translation initiation factor IF-3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319928693|gb|ADV79378.1| translation initiation factor IF-3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 183 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 50 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL++G KVK++++FRGRE H L +LL E I+ P Sbjct: 110 DHDFGVKLKSAIKFLKEGNKVKVTIRFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPN 169 Query: 122 FEGRQMIMILSSKC 135 EGR ++M+L+ K Sbjct: 170 IEGRNLMMVLTPKS 183 >gi|238018997|ref|ZP_04599423.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748] gi|313893048|ref|ZP_07826625.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158 str. F0412] gi|237864481|gb|EEP65771.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748] gi|313442401|gb|EFR60816.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158 str. F0412] Length = 172 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 99 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|298492834|ref|YP_003723011.1| translation initiation factor IF-3 ['Nostoc azollae' 0708] gi|298234752|gb|ADI65888.1| translation initiation factor IF-3 ['Nostoc azollae' 0708] Length = 177 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/137 (47%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL ELL + E FGE+ + Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEELLKRMASDLEPFGEVQQA- 161 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 162 --PKKEGRNMMMLISPK 176 >gi|199597226|ref|ZP_03210658.1| Translation initiation factor 3 (IF-3) [Lactobacillus rhamnosus HN001] gi|199592030|gb|EDZ00105.1| Translation initiation factor 3 (IF-3) [Lactobacillus rhamnosus HN001] Length = 137 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 1 MAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 61 GEADFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 120 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 121 KMDGRSMFLMLAPRA 135 >gi|20808119|ref|NP_623290.1| translation initiation factor IF3 [Thermoanaerobacter tengcongensis MB4] gi|22095768|sp|Q8R9C2|IF3_THETN RecName: Full=Translation initiation factor IF-3 gi|20516706|gb|AAM24894.1| Translation initiation factor IF3 [Thermoanaerobacter tengcongensis MB4] Length = 180 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I + P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 46 KIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPNIE 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL+DG KVK++++FRGRE H L +LL E E ++ P Sbjct: 106 DHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLAEDLLKRFAEELREYGNVEKAPS 165 Query: 122 FEGRQMIMILSSK 134 +GR M+M+++ K Sbjct: 166 MDGRNMMMVIAPK 178 >gi|227530472|ref|ZP_03960521.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC 49540] gi|227349577|gb|EEJ39868.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC 49540] Length = 170 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + P+V +I+D K RY +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEDANLDLVLVAPKARPAVARIMDYGKYRYEMQKKEREARKKQKTVTVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV++S++FRGR I H+D+GR+++ + + +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRVSLRFRGRAITHKDIGRDMIERMAKETEDIATVVQRP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAPAA 165 >gi|291523567|emb|CBK81860.1| bacterial translation initiation factor 3 (bIF-3) [Coprococcus catus GD/7] Length = 165 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EANLDLV+I + P VCKI+D K RY + EARKKQK+ +KE+++ P I Sbjct: 30 MKLAREANLDLVKIAPTAKPPVCKIIDYGKYRYEQARREKEARKKQKTIEVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++V+FRGRE+ H +G+ +L + ++ +I+ ID Sbjct: 90 DTNDLNTKVNQARKFVSGGNKVKVAVRFRGRELAHTAVGKTILEDFAQKLSDIAVIDKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EG+ M+M L K Sbjct: 150 KLEGKSMVMFLVEK 163 >gi|116495180|ref|YP_806914.1| translation initiation factor 3 [Lactobacillus casei ATCC 334] gi|191638688|ref|YP_001987854.1| Translation initiation factor IF-3 [Lactobacillus casei BL23] gi|227534804|ref|ZP_03964853.1| translation initiation factor IF3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239632061|ref|ZP_04675092.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066743|ref|YP_003788766.1| translation initiation factor 3 [Lactobacillus casei str. Zhang] gi|116105330|gb|ABJ70472.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus casei ATCC 334] gi|190712990|emb|CAQ66996.1| Translation initiation factor IF-3 [Lactobacillus casei BL23] gi|227187560|gb|EEI67627.1| translation initiation factor IF3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526526|gb|EEQ65527.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439150|gb|ADK18916.1| Translation initiation factor 3 (IF-3) [Lactobacillus casei str. Zhang] gi|327382729|gb|AEA54205.1| Translation initiation factor IF-3 [Lactobacillus casei LC2W] gi|327385916|gb|AEA57390.1| Translation initiation factor IF-3 [Lactobacillus casei BD-II] Length = 154 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 18 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + EI+ ++ P Sbjct: 78 GEADFNTRLKNATKFLEKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKEIAAVETHP 137 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 138 KMDGRSMFLMLAPRA 152 >gi|160893268|ref|ZP_02074056.1| hypothetical protein CLOL250_00814 [Clostridium sp. L2-50] gi|156865351|gb|EDO58782.1| hypothetical protein CLOL250_00814 [Clostridium sp. L2-50] Length = 164 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLV+I P VCKI+D K RY + + EARKKQK+ IKEV++ P I Sbjct: 30 LKLAKEAELDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEARKKQKTMEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ FL G KVK++++FRGRE+ H + + +L E+ +I+ ID Sbjct: 90 DTNDLNTKVNQARKFLTHGDKVKVTLRFRGRELAHVEQTKGILDEFAEKLSDIAVIDKPA 149 Query: 121 KFEGRQMIMILSSK 134 KFEGR MIM L+ K Sbjct: 150 KFEGRSMIMFLTEK 163 >gi|300691316|ref|YP_003752311.1| translation initiation factor IF-3 [Ralstonia solanacearum PSI07] gi|299078376|emb|CBJ51026.1| Translation initiation factor IF-3 [Ralstonia solanacearum PSI07] Length = 178 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRTKITLRFRGREMAHQEIGVRMLDRLKADLEEFGQVEQMP 161 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 162 KMEGRQMVMMLAPK 175 >gi|159901151|ref|YP_001547398.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus ATCC 23779] gi|159894190|gb|ABX07270.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus ATCC 23779] Length = 219 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +LDLVE+ + +P VC+++D K RY K EARK QK +KE++M+P Sbjct: 47 LDMAHDRDLDLVEVAPNASPPVCRLMDYGKYRYEQTKKEREARKNQKQVELKEIRMQPRT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQVK+ FL +G KVK SV+FRGREI H ++GRE+L I E + ++ +P Sbjct: 107 DTHDLQVKVNNARRFLEEGHKVKFSVRFRGREITHPEIGREMLEQIAEDLRDHGVLEQKP 166 Query: 121 KFEGRQMIMILSS 133 EGR +I++ Sbjct: 167 TLEGRAYSLIMAP 179 >gi|332981194|ref|YP_004462635.1| translation initiation factor 3 (bIF-3) [Mahella australiensis 50-1 BON] gi|332698872|gb|AEE95813.1| bacterial translation initiation factor 3 (bIF-3) [Mahella australiensis 50-1 BON] Length = 167 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV + TP VC+I+D K +Y K EA+K Q+ IKE+++ I Sbjct: 30 LELAQRKQLDLVNVAPQATPPVCRIMDYGKYKYEAIKQEKEAKKNQRIIDIKEIRLSTTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ VK+K FL++G KVK++V+FRGR+I H D+ E+L N E+ E+ I+ P Sbjct: 90 EEHDIDVKIKNAIKFLKNGDKVKVTVRFRGRQITHPDIAAEILKNFAEKVAEVGTIEKAP 149 Query: 121 KFEGRQMIMILSSKC 135 + +GR M+MIL+ K Sbjct: 150 QMDGRNMLMILTPKA 164 >gi|291547119|emb|CBL20227.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus sp. SR1/5] Length = 164 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQEA LDLV+I P VCKI+D K RY + + EARKKQK+ +KEV++ P I Sbjct: 30 MAKAQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEARKKQKTIDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL+ K+ A FL G +VK++++FRGRE+ H R +L + + +I+ ++ P Sbjct: 90 DTNDLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMSSSRHVLDDFADLLSDIATVEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 150 KVEGRSMTMFLTEK 163 >gi|118580722|ref|YP_901972.1| translation initiation factor IF-3 [Pelobacter propionicus DSM 2379] gi|118503432|gb|ABK99914.1| bacterial translation initiation factor 3 (bIF-3) [Pelobacter propionicus DSM 2379] Length = 154 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A++ LDLVE+ + TP VC+I+D K +Y K E+RKKQ +KE+K+RP D Sbjct: 19 ELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESRKKQAHVEVKEIKLRPKTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K+K + FL +G K K+++ FRGREI H D+GR ++ +I+ I+ +P+ Sbjct: 79 DHDLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVIQRFAAELEDIAIIETQPR 138 Query: 122 FEGRQMIMILSSK 134 +GR M MI++ K Sbjct: 139 VDGRNMYMIVAPK 151 >gi|288553676|ref|YP_003425611.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4] gi|288544836|gb|ADC48719.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4] Length = 167 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ NLDLV + + P VC+I+D K RY QK EARKKQK +KEV++ P I Sbjct: 31 LEMAQNVNLDLVCVAPAAKPPVCRIMDYGKFRYEQQKKDKEARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H +GR +L + + +++ I+ +P Sbjct: 91 EDHDFNTKLRNARKFLEKGDKVKAAIRFRGRAITHSQIGRVVLERLAKECEDVAVIEAKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M +IL+ K Sbjct: 151 KMEGRSMFLILAPK 164 >gi|172058199|ref|YP_001814659.1| translation initiation factor IF-3 [Exiguobacterium sibiricum 255-15] gi|171990720|gb|ACB61642.1| translation initiation factor IF-3 [Exiguobacterium sibiricum 255-15] Length = 176 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLV + TP VCKI+D K R+ +QK E RK QK +KEV++ P I Sbjct: 40 LRLAEEADLDLVMVAPQATPPVCKIMDYGKYRFELQKKDKETRKNQKVIQMKEVRLSPTI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D Q K + FL +G KVK S++FRGR I H ++GR +L + E I+ P Sbjct: 100 EENDFQTKFRNAKKFLENGNKVKASIRFRGRAITHSEIGRRVLERLATELSEFGVIEQRP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 160 KMEGRSMFLVLAPK 173 >gi|254446924|ref|ZP_05060391.1| translation initiation factor IF-3 [gamma proteobacterium HTCC5015] gi|198263063|gb|EDY87341.1| translation initiation factor IF-3 [gamma proteobacterium HTCC5015] Length = 146 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 84/132 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLVEI + P VC+++D K ++ K A A+K QK +KEVK RP D Sbjct: 11 KIAEEAALDLVEIVPNAKPPVCRVMDYGKYKFEQSKKANNAKKNQKQIKVKEVKFRPGTD 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL + FL G K K++++FRGREI H +LGR+LL I+ E + ++ PK Sbjct: 71 DGDYNVKLNNLKRFLEKGDKAKVTLRFRGREITHHELGRDLLKRIEGDLEEYASVEQFPK 130 Query: 122 FEGRQMIMILSS 133 EGRQMIMIL+ Sbjct: 131 MEGRQMIMILAP 142 >gi|77919020|ref|YP_356835.1| translation initiation factor IF-3 [Pelobacter carbinolicus DSM 2380] gi|77545103|gb|ABA88665.1| bacterial translation initiation factor 3 (bIF-3) [Pelobacter carbinolicus DSM 2380] Length = 146 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVE+ + P VC+I+D K +Y K EA+KK IKEVKMRP Sbjct: 11 LRAAEERGLDLVEVSPNANPPVCRIMDYGKYKYQASKRLAEAKKKSARVDIKEVKMRPKT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKL+ FL G KVK++V FRGRE+ H + G +L+ + E G+ +++ P Sbjct: 71 EEHDFQVKLRNAMRFLEAGNKVKVTVMFRGREVTHPEFGFDLMKRVAEEVGDAGQVEMSP 130 Query: 121 KFEGRQMIMILSSK 134 + GR M M+++ K Sbjct: 131 RMAGRFMTMVIAPK 144 >gi|304415439|ref|ZP_07396088.1| translation initiation factor IF-3 [Candidatus Regiella insecticola LSR1] gi|304282703|gb|EFL91217.1| translation initiation factor IF-3 [Candidatus Regiella insecticola LSR1] Length = 182 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K A E +KKQK IKE+K RP Sbjct: 45 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYVKSKTAQEQKKKQKVVHIKEIKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +KE E + ++ P Sbjct: 105 DESDYKVKLRNLIRFLEDGDKTKITLRFRGREMAHQQIGIDVLNRLKEDLSEWAVVESFP 164 Query: 121 -KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 165 SRVEGRQMVMVLAPK 179 >gi|224826513|ref|ZP_03699614.1| translation initiation factor IF-3 [Lutiella nitroferrum 2002] gi|224601114|gb|EEG07296.1| translation initiation factor IF-3 [Lutiella nitroferrum 2002] Length = 174 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E ++DLVEI + P VCK++D K +Y K EA+ KQK IKEVK RP Sbjct: 39 MAAAEELDIDLVEISPTAQPPVCKLMDYGKFKYEQSKKRHEAKLKQKQVQIKEVKFRPGT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 99 DDGDYGVKLRNLVRFLSDGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 159 RLEGRQMVMMIAPK 172 >gi|319790150|ref|YP_004151783.1| translation initiation factor IF-3 [Thermovibrio ammonificans HB-1] gi|317114652|gb|ADU97142.1| translation initiation factor IF-3 [Thermovibrio ammonificans HB-1] Length = 142 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVE+ + P VC+I+D K +Y +QK EA+KKQK+ +K VK+RP Sbjct: 7 LELARDKGLDLVEVSPNANPPVCRIMDFGKYKYQMQKKMHEAKKKQKTVEVKTVKVRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+QV++K + F+ G KVK V FRGRE H ++G L I E +I+ ++ +P Sbjct: 67 DEHDMQVRIKQVRRFIEKGDKVKAVVMFRGREQAHLEIGEAQLMKIYEAVKDIAEMERKP 126 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 127 KKEGRDMIMILAPK 140 >gi|304439755|ref|ZP_07399653.1| translation initiation factor IF3 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371742|gb|EFM25350.1| translation initiation factor IF3 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 184 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLV+I P VC+I+D K RY + K E++KKQK IKE++ P I Sbjct: 46 LDLAIEKRLDLVKIAPQAKPPVCRIMDYGKYRYELIKREKESKKKQKVISIKEIRFTPSI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K GFL+ G +VK+SV+FRGRE+ H +LGRE+L N E + +D +P Sbjct: 106 EDHDLRTKANQTIGFLKRGDRVKVSVRFRGRELGHTELGREVLDNFVELISDNGVVDKKP 165 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 166 KMEGRSMVMFLNPK 179 >gi|254410410|ref|ZP_05024189.1| translation initiation factor IF-3 [Microcoleus chthonoplastes PCC 7420] gi|196182616|gb|EDX77601.1| translation initiation factor IF-3 [Microcoleus chthonoplastes PCC 7420] Length = 175 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 41 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ A FL+ G KVK ++ FRGREI H +L +LL + +++ + P Sbjct: 101 DDHDYQVRVNAARRFLKSGDKVKATITFRGREIQHANLAEDLLKRMATDLQDVAEVQQAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LSSK Sbjct: 161 KREGRNMMMLLSSK 174 >gi|209523635|ref|ZP_03272189.1| translation initiation factor IF-3 [Arthrospira maxima CS-328] gi|209496040|gb|EDZ96341.1| translation initiation factor IF-3 [Arthrospira maxima CS-328] Length = 180 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE LDLV + P VC+I+D K +Y +K EARKKQ + +KEVKMR I Sbjct: 43 MKLAQEKELDLVLVSDKADPPVCRIMDYGKFKYEQEKKVREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L RELL + E + + P Sbjct: 103 DDHDYQVRVNQAKRFLKSGDKVKATIMFRGREIQHSNLARELLKRMAVDLEEHAEVQQSP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+L+ K Sbjct: 163 KQEGRSMMMLLAPK 176 >gi|317129890|ref|YP_004096172.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM 2522] gi|315474838|gb|ADU31441.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM 2522] Length = 166 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ ANLDLV + + P VC+I+D K RY QK EARK QK KEV++ P I Sbjct: 30 LEMAQNANLDLVMVAPNAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIINTKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H +G+ +L + +I+ ++ +P Sbjct: 90 EEHDFNTKLRNARKFLTKGDKVKAAIRFRGRAITHSQIGKVVLEKLASECEDIATVEQKP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR M +ILS K Sbjct: 150 KMEGRSMFLILSPKA 164 >gi|331701569|ref|YP_004398528.1| translation initiation factor IF-3 [Lactobacillus buchneri NRRL B-30929] gi|329128912|gb|AEB73465.1| Translation initiation factor IF-3 [Lactobacillus buchneri NRRL B-30929] Length = 173 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 35 LQLAEDADLDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++S++F+GR I H+D+GR++L + +++ + P Sbjct: 95 DVNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKDIGRKVLDRMAAETADVATVTQRP 154 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 155 KMDGRSMFLMLSPK 168 >gi|269798229|ref|YP_003312129.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008] gi|269094858|gb|ACZ24849.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008] Length = 182 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 49 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ + E + I+ Sbjct: 109 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFADELKETASIEKAA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 169 KLEGRNMTMILVSK 182 >gi|294792090|ref|ZP_06757238.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27] gi|294457320|gb|EFG25682.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27] Length = 172 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ + E + I+ Sbjct: 99 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFADELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|186686412|ref|YP_001869608.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|238691747|sp|B2IY66|IF3_NOSP7 RecName: Full=Translation initiation factor IF-3 gi|186468864|gb|ACC84665.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] Length = 177 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/137 (47%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV I P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLISDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + E FGE+ + Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGELQQA- 161 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 162 --PKKEGRNMMMLISPK 176 >gi|144899403|emb|CAM76267.1| Initiation factor 3 [Magnetospirillum gryphiswaldense MSR-1] Length = 173 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/132 (49%), Positives = 95/132 (71%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVE+ + P VCKILD K +Y QK EA+KKQK +KE+K+RP ID Sbjct: 42 MAEEAGLDLVEVSPNADPPVCKILDYGKFKYEAQKKKAEAKKKQKVIEVKEIKLRPNIDD 101 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D VK++A+ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +I+ PK Sbjct: 102 NDYGVKMRAMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLERVRDDLEDLGKIEQVPKM 161 Query: 123 EGRQMIMILSSK 134 EGRQM+M++S K Sbjct: 162 EGRQMVMVVSPK 173 >gi|158321005|ref|YP_001513512.1| translation initiation factor IF-3 [Alkaliphilus oremlandii OhILAs] gi|158141204|gb|ABW19516.1| translation initiation factor IF-3 [Alkaliphilus oremlandii OhILAs] Length = 142 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K +Y + K EARK QK +KEV++ P I+ Sbjct: 8 KLANGKNLDLVKIAPQANPPVCKIMDFGKYKYELSKKEKEARKNQKIVDVKEVRLSPSIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL VK FL++G KVK+++KFRGRE+ + G+ ++ E+S ++ EPK Sbjct: 68 SHDLSVKANNASKFLKNGDKVKVTMKFRGRELANTTKGQTIIKQFASILEEVSTVEKEPK 127 Query: 122 FEGRQMIMILSSK 134 EG+Q+IMIL+ K Sbjct: 128 LEGKQLIMILAPK 140 >gi|332968644|gb|EGK07697.1| translation initiation factor IF3 [Psychrobacter sp. 1501(2011)] Length = 167 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 65/130 (50%), Positives = 87/130 (66%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ NLDLVE+ P VCKI+D ++ Y ++ A EA+K QK T +KE+K+RP D Sbjct: 34 ARDDNLDLVELVPDAKPPVCKIMDYKRYLYDQKQKAKEAKKNQKQTQLKEMKLRPSTDEA 93 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ I FL D KVK++++FRGRE+ HQDLGR+ L I E EIS ++ PK E Sbjct: 94 DYQVKLRKIISFLEDQDKVKVTIRFRGREMAHQDLGRQQLERIIEDTAEISNVEQHPKME 153 Query: 124 GRQMIMILSS 133 GRQM M+L Sbjct: 154 GRQMGMLLGP 163 >gi|94310106|ref|YP_583316.1| translation initiation factor 3 [Cupriavidus metallidurans CH34] gi|93353958|gb|ABF08047.1| protein chain initiation factor IF-3 [Cupriavidus metallidurans CH34] Length = 154 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + TP V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 18 LRLAEDKDLDLVEIAPNATPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L +K E+ +++ P Sbjct: 78 DDGDYNVKLRNLRRFLEEGDKTKITLRFRGREMAHQEIGARVLERLKADLEELGQVEQMP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 KMEGRQMVMVLAPK 151 >gi|15615702|ref|NP_244006.1| translation initiation factor IF-3 [Bacillus halodurans C-125] gi|10175762|dbj|BAB06859.1| translation initiation factor IF-3 [Bacillus halodurans C-125] Length = 190 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ NLDLV + + P VC+I+D K RY QK EARKKQK+ +KEV++ P I Sbjct: 54 LDMARNVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKDKEARKKQKTINVKEVRLSPTI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GR +L + + +I+ ++ +P Sbjct: 114 EDHDFNTKLRNARKFLSKGDKVKAAIRFRGRAITHSEIGRNVLERLAKECEDIAIVEAKP 173 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 174 KMEGRSMFLVLAPKT 188 >gi|227498536|ref|ZP_03928680.1| translation initiation factor IF-3 [Acidaminococcus sp. D21] gi|226903992|gb|EEH89910.1| translation initiation factor IF-3 [Acidaminococcus sp. D21] Length = 175 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + +LDLVEI P VC+I+D K +Y QK EARK+QK+ +KEVK+R I Sbjct: 39 LELAAQHHLDLVEIAPKAKPPVCRIMDYGKYQYEQQKREKEARKRQKTVDVKEVKLRIRI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK K FL G KVK ++ FRGRE+ H +LG ELL+ + + +I+ I+ +P Sbjct: 99 EEHDFDVKTKNAIRFLEGGDKVKATIMFRGRELTHPELGEELLNKMAVKLQDIAVIERKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+MI++ K Sbjct: 159 KLEGRNMVMIVAPKS 173 >gi|14194834|sp|Q9K867|IF3_BACHD RecName: Full=Translation initiation factor IF-3 Length = 171 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ NLDLV + + P VC+I+D K RY QK EARKKQK+ +KEV++ P I Sbjct: 35 LDMARNVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKDKEARKKQKTINVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GR +L + + +I+ ++ +P Sbjct: 95 EDHDFNTKLRNARKFLSKGDKVKAAIRFRGRAITHSEIGRNVLERLAKECEDIAIVEAKP 154 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 155 KMEGRSMFLVLAPKT 169 >gi|222056446|ref|YP_002538808.1| translation initiation factor IF-3 [Geobacter sp. FRC-32] gi|221565735|gb|ACM21707.1| translation initiation factor IF-3 [Geobacter sp. FRC-32] Length = 154 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 17 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQVQVQLKEVKLRPKT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + FL +G K KI+V FRGREI HQ+LG L N +I ++ + Sbjct: 77 DEHDLQFKIKHVRRFLEEGNKAKITVVFRGREITHQELGMSALDNFASELQDIGIVEVKQ 136 Query: 121 KFEGRQMIMILSSKC 135 K EGR M +I++ K Sbjct: 137 KMEGRSMFIIVAPKT 151 >gi|298244242|ref|ZP_06968048.1| translation initiation factor IF-3 [Ktedonobacter racemifer DSM 44963] gi|297551723|gb|EFH85588.1| translation initiation factor IF-3 [Ktedonobacter racemifer DSM 44963] Length = 216 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVE+ +V P VCK++D + +Y K EARK+QK +KE+++RP Sbjct: 45 LDIARERDLDLVEVSPNVVPPVCKLMDYGRFKYDQNKKENEARKRQKIVTVKEIRLRPRT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD++VK + I FL +G +VK+SV+FRG E+ H ++GR LL +I E I+ P Sbjct: 105 DDHDIEVKTRKIQQFLAEGDRVKVSVQFRGAEMRHPEIGRRLLDDIAEVLKGTVTIERTP 164 Query: 121 KFEGRQMIMILS 132 EGR M MILS Sbjct: 165 SMEGRMMSMILS 176 >gi|313884895|ref|ZP_07818647.1| translation initiation factor IF-3 [Eremococcus coleocola ACS-139-V-Col8] gi|312619586|gb|EFR31023.1| translation initiation factor IF-3 [Eremococcus coleocola ACS-139-V-Col8] Length = 175 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLV + + P V +I+D K R+ +QK E RK QK +KE+++ P I Sbjct: 40 LTIAESFELDLVLVSPNAQPPVARIMDYGKYRFELQKKEKEQRKNQKVVNVKEIRLSPSI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL G KVK+S++FRGR I H+DLGR++L + E E++ ++ +P Sbjct: 100 EEHDYQTKLRQAIKFLEKGDKVKVSIRFRGRAITHKDLGRDVLEDFIEDTAEVATVESKP 159 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MIL+ Sbjct: 160 KMEGRSMFMILAPSA 174 >gi|75908259|ref|YP_322555.1| translation initiation factor IF-3 [Anabaena variabilis ATCC 29413] gi|20138475|sp|Q8YNE3|IF3_ANASP RecName: Full=Translation initiation factor IF-3 gi|123758829|sp|Q3MBH6|IF3_ANAVT RecName: Full=Translation initiation factor IF-3 gi|75701984|gb|ABA21660.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena variabilis ATCC 29413] Length = 177 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + E FGE+ + Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQA- 161 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 162 --PKKEGRNMMMLISPK 176 >gi|299066587|emb|CBJ37777.1| Translation initiation factor IF-3 [Ralstonia solanacearum CMR15] Length = 183 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 47 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 107 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEYAQVEQMP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 167 KMEGRQMVMMLMPK 180 >gi|54298705|ref|YP_125074.1| translation initiation factor IF-3 [Legionella pneumophila str. Paris] gi|61213079|sp|Q5X1H4|IF3_LEGPA RecName: Full=Translation initiation factor IF-3 gi|53752490|emb|CAH13922.1| Translation initiation factor IF-3 [Legionella pneumophila str. Paris] Length = 178 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ LDLVEI + P VC+I+D K + + K EARKKQK +KE+K RP Sbjct: 42 LRAAEESGLDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ Sbjct: 102 EDGDYQVKLRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAVVEQHA 161 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+LS K Sbjct: 162 KREGRQLLMVLSPK 175 >gi|229552545|ref|ZP_04441270.1| translation initiation factor IF3 [Lactobacillus rhamnosus LMS2-1] gi|258508742|ref|YP_003171493.1| translation initiation factor 3 [Lactobacillus rhamnosus GG] gi|258539918|ref|YP_003174417.1| translation initiation factor IF-3 infC [Lactobacillus rhamnosus Lc 705] gi|229314097|gb|EEN80070.1| translation initiation factor IF3 [Lactobacillus rhamnosus LMS2-1] gi|257148669|emb|CAR87642.1| Translation initiation factor IF-3 [Lactobacillus rhamnosus GG] gi|257151594|emb|CAR90566.1| Translation initiation factor IF-3 [Lactobacillus rhamnosus Lc 705] gi|259650048|dbj|BAI42210.1| translation initiation factor IF-3 [Lactobacillus rhamnosus GG] Length = 154 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 18 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 78 GEADFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 137 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 138 KMDGRSMFLMLAPRA 152 >gi|17232115|ref|NP_488663.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] gi|17133760|dbj|BAB76322.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] Length = 204 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 70 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + E FGE+ + Sbjct: 130 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQA- 188 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 189 --PKKEGRNMMMLISPK 203 >gi|290968292|ref|ZP_06559834.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1 str. 28L] gi|290781651|gb|EFD94237.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1 str. 28L] Length = 154 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 90/132 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A+E +LDLVE+ + P VC+I++ K RY QK EA+KKQK +KEVK+RP I+ Sbjct: 19 QIAEERHLDLVEVAPNGKPPVCRIMNYGKYRYEQQKREKEAKKKQKVLVLKEVKLRPNIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+KA FL DG KVK+++ FRGRE+ H +LGR+LL + E + ++ EPK Sbjct: 79 DHDFYVKMKAAQRFLGDGSKVKVTIMFRGREMSHPELGRDLLIRFADELKESAHVEKEPK 138 Query: 122 FEGRQMIMILSS 133 EGR M M++++ Sbjct: 139 IEGRNMTMVMAT 150 >gi|54295555|ref|YP_127970.1| translation initiation factor IF-3 [Legionella pneumophila str. Lens] gi|61213076|sp|Q5WT83|IF3_LEGPL RecName: Full=Translation initiation factor IF-3 gi|53755387|emb|CAH16883.1| Translation initiation factor IF-3 [Legionella pneumophila str. Lens] Length = 178 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ LDLVEI + P VC+I+D K + + K EARKKQK +KE+K RP Sbjct: 42 LRAAEESGLDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ Sbjct: 102 EDGDYQVKLRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHA 161 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+LS K Sbjct: 162 KREGRQLLMVLSPK 175 >gi|329904274|ref|ZP_08273746.1| Translation initiation factor 3 [Oxalobacteraceae bacterium IMCC9480] gi|327548051|gb|EGF32783.1| Translation initiation factor 3 [Oxalobacteraceae bacterium IMCC9480] Length = 154 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +MA+EAN+DLVEI + P V +++D K +Y QK A EA+ +QK +KEVK RP Sbjct: 18 FRMAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKRAHEAKLRQKIILVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL +G K KI+++FRGRE+ HQD+G +L +K +++ P Sbjct: 78 DDGDYGIKLRNLIKFLDEGDKTKITLRFRGREMAHQDIGVRMLERLKLDLEPYGQVEQWP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 138 KMEGRQMIMVLAPK 151 >gi|288963151|ref|YP_003453430.1| translation initiation factor IF-3 [Azospirillum sp. B510] gi|288915403|dbj|BAI76886.1| translation initiation factor IF-3 [Azospirillum sp. B510] Length = 154 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 86/123 (69%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VE+ P VCKILD K R+ QK A EARKKQK +KE+K+RP ID HD VK+++ Sbjct: 32 VEVAPQADPPVCKILDYGKFRFEEQKKANEARKKQKIIELKEIKLRPNIDDHDYDVKMRS 91 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ +G KVK++++FRGRE+ HQDLG +L ++++ +I++++ P+ EGR M+M+L Sbjct: 92 AIRFIEEGDKVKMTMRFRGREMAHQDLGLNVLVRVRDQLQDIAKVEQMPRVEGRMMVMVL 151 Query: 132 SSK 134 + + Sbjct: 152 APR 154 >gi|462398|sp|P33319|IF3_PROVU RecName: Full=Translation initiation factor IF-3 gi|150892|gb|AAC36812.1| translation initiation factor IF3 [Proteus vulgaris] Length = 179 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K E +K+QK +KEVK RP Sbjct: 43 LEKAEEAGADLVEISPNAEPPVCRIMDYGKFLYEKSKTLKEQKKEQKVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ I++ E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIRQDLDELATVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 NKIEGRQMIMVLAPK 177 >gi|326201563|ref|ZP_08191434.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] gi|325988163|gb|EGD48988.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] Length = 173 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K + + K EARK QK IKEV++ P I+ Sbjct: 40 KLANSKNLDLVKIAPQGVPPVCKIMDYGKYMFELAKKEKEARKNQKIISIKEVRVSPSIE 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+DG KVK+SVKFRGRE+ + +G E+L +E ++ ++ PK Sbjct: 100 DHDFEFKVKNAYKFLKDGDKVKVSVKFRGREMHYTSIGNEILGKFEEAVKDVGTVEKRPK 159 Query: 122 FEGRQMIMILSSK 134 EG+ MIMIL+ K Sbjct: 160 LEGKSMIMILNPK 172 >gi|111115013|ref|YP_709631.1| translation initiation factor IF-3 [Borrelia afzelii PKo] gi|216263783|ref|ZP_03435777.1| translation initiation factor IF-3 [Borrelia afzelii ACA-1] gi|123047048|sp|Q0SNX3|IF3_BORAP RecName: Full=Translation initiation factor IF-3 gi|110890287|gb|ABH01455.1| translation initiation factor 3 [Borrelia afzelii PKo] gi|215979827|gb|EEC20649.1| translation initiation factor IF-3 [Borrelia afzelii ACA-1] Length = 186 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|156741418|ref|YP_001431547.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM 13941] gi|156232746|gb|ABU57529.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM 13941] Length = 225 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLVE+ + P VC+ILD K RY K EARK QK +K++++ P D Sbjct: 51 MAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVDVKQIRLEPKTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HDL VK K FL DG KVK +++FRGREI HQ++G E+L + E ++S ++ P Sbjct: 111 HDLDVKAKQARRFLLDGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDVSVVEQRPTM 170 Query: 123 EGRQMIMILSS 133 EGR + ++L+ Sbjct: 171 EGRVLTLLLAP 181 >gi|56964454|ref|YP_176185.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16] gi|61213073|sp|Q5WEI6|IF3_BACSK RecName: Full=Translation initiation factor IF-3 gi|56910697|dbj|BAD65224.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16] Length = 167 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ NLDLV + + P VC+I+D K RY QK EARK QK IKEV++ P I Sbjct: 31 LEMAQRVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKEKEARKNQKVITIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KL+ FL G KVK S++FRGR I H +GR++L + + +I+ I+ P Sbjct: 91 EANDFNTKLRNARKFLEKGDKVKASIRFRGRAITHSQIGRDVLERLAKECEDIATIEARP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++++ K Sbjct: 151 KMEGRSMFLVMAPKT 165 >gi|284033334|ref|YP_003383265.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836] gi|283812627|gb|ADB34466.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836] Length = 240 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ ++ P VCK++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 46 LRLAQEADLDLVEVAATARPPVCKLMDFGKYKYETAQKARESRRNQTNTVIKEMKLRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 106 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGFRLLQRLAEDVSELGFVESSP 165 Query: 121 KFEGRQMIMILSS 133 + +GR MIM+L Sbjct: 166 RQDGRNMIMVLGP 178 >gi|229829199|ref|ZP_04455268.1| hypothetical protein GCWU000342_01286 [Shuttleworthia satelles DSM 14600] gi|229792362|gb|EEP28476.1| hypothetical protein GCWU000342_01286 [Shuttleworthia satelles DSM 14600] Length = 191 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV++ P VCKI+D K RY + + A EA++KQK +KE++M P ID Sbjct: 57 KLADEAKLDLVKVAPQAKPPVCKIIDYGKYRYEMARKAKEAKRKQKQIELKEIRMSPNID 116 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K KA FL G KVKI+++FRGRE+ H R +L E +I+ +D PK Sbjct: 117 SNDLMTKTKAARKFLEKGNKVKITLRFRGREMAHVSASRHILEEFAESLEDIASVDKAPK 176 Query: 122 FEGRQMIMILSSK 134 EGR M ++L+ K Sbjct: 177 MEGRSMSLVLAVK 189 >gi|239625927|ref|ZP_04668958.1| translation initiation factor IF-3 [Clostridiales bacterium 1_7_47_FAA] gi|239520157|gb|EEQ60023.1| translation initiation factor IF-3 [Clostridiales bacterium 1_7_47FAA] Length = 164 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+A LDLV+I + P VCKI+D K RY + + EARKKQK IKEV++ P I Sbjct: 30 LKMAQDAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEARKKQKVIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ ID Sbjct: 90 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMYKSKYILDDFAESLKDIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|296163126|ref|ZP_06845897.1| translation initiation factor IF-3 [Burkholderia sp. Ch1-1] gi|295886628|gb|EFG66475.1| translation initiation factor IF-3 [Burkholderia sp. Ch1-1] Length = 156 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP Sbjct: 20 FRMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKVVQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ P Sbjct: 80 DDGDYNVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|148655186|ref|YP_001275391.1| translation initiation factor IF-3 [Roseiflexus sp. RS-1] gi|148567296|gb|ABQ89441.1| bacterial translation initiation factor 3 (bIF-3) [Roseiflexus sp. RS-1] Length = 238 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVE+ + P VC+ILD K RY K EARK QK +K++++ P Sbjct: 62 LSMAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVEVKQIRLEPKT 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+VK K FL +G KVK +++FRGREI HQ++G E+L + E +IS ++ P Sbjct: 122 DDHDLEVKAKQARRFLLEGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDISVVEQRP 181 Query: 121 KFEGRQMIMILS 132 EGR + ++L+ Sbjct: 182 TMEGRVLTLLLA 193 >gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis mellifera] Length = 283 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA L+L+E+ + P V KI+D K +Y QK EARKKQK IKE+K+RP I Sbjct: 150 LKMAYAVGLNLLEVSPNADPPVAKIVDYGKFKYEQQKKKNEARKKQKVIDIKEIKVRPNI 209 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVKL A F+ G KVKI+++FRGRE+ HQ+LG +LL ++ E+++ + Sbjct: 210 DENDYQVKLNAAKRFIAGGDKVKITLRFRGREMAHQELGVQLLDRLRVDMEEVAKPEQTS 269 Query: 121 KFEGRQMIMILSSK 134 K E RQMIM+L ++ Sbjct: 270 KIENRQMIMVLVAR 283 >gi|300703879|ref|YP_003745481.1| translation initiation factor if-3 [Ralstonia solanacearum CFBP2957] gi|299071542|emb|CBJ42866.1| Translation initiation factor IF-3 [Ralstonia solanacearum CFBP2957] Length = 178 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 161 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 162 KMEGRQMVMMLMPK 175 >gi|260424667|ref|ZP_05732874.2| translation initiation factor IF-3 [Dialister invisus DSM 15470] gi|260402756|gb|EEW96303.1| translation initiation factor IF-3 [Dialister invisus DSM 15470] Length = 172 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++E LDLVE+ + P VC+I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 38 IRLSEEKGLDLVEVAPNGKPPVCRIMNYGKYRYEQQKRDKEAKKKQKVFQLKEVKLRPNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL DG KVK+++ FRGRE+ H +LG E+L + G+ + P Sbjct: 98 EDHDFYVKLKNAQRFLADGNKVKVTIMFRGREMTHPELGGEVLERFAKELGDSIVREKPP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M++ K Sbjct: 158 KLEGRNMTMVVGPKA 172 >gi|83748298|ref|ZP_00945323.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Ralstonia solanacearum UW551] gi|207742947|ref|YP_002259339.1| translation initiation factor if-3 protein [Ralstonia solanacearum IPO1609] gi|83725030|gb|EAP72183.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Ralstonia solanacearum UW551] gi|206594342|emb|CAQ61269.1| translation initiation factor if-3 protein [Ralstonia solanacearum IPO1609] Length = 183 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 47 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 107 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 167 KMEGRQMVMMLMPK 180 >gi|258404182|ref|YP_003196924.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM 5692] gi|257796409|gb|ACV67346.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM 5692] Length = 173 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 83/132 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA+E LDLVE+ P VCK++D K +Y +K EA+KKQ +KEVK RP D Sbjct: 38 QMAEEQGLDLVEVSPKARPPVCKVMDYGKYQYEQKKRTQEAKKKQTQVQLKEVKFRPKTD 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD Q K++ I FL G + K+++ FRGREI+H+D G+E+L ++ E ++++ + + Sbjct: 98 EHDYQTKVRHIQRFLEKGDRCKVTIFFRGREIVHKDRGQEILDRVQRDLAEEAKVEQQAR 157 Query: 122 FEGRQMIMILSS 133 EGR M M L+ Sbjct: 158 VEGRTMSMTLAP 169 >gi|224534224|ref|ZP_03674802.1| translation initiation factor IF-3 [Borrelia spielmanii A14S] gi|224514326|gb|EEF84642.1| translation initiation factor IF-3 [Borrelia spielmanii A14S] Length = 186 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG +L +I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYGILDSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|218779645|ref|YP_002430963.1| translation initiation factor IF-3 [Desulfatibacillum alkenivorans AK-01] gi|218761029|gb|ACL03495.1| translation initiation factor IF-3 [Desulfatibacillum alkenivorans AK-01] Length = 174 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ + LDLVE+ + +P VCKI+D K +Y K EA+KK S +KE+K+RP Sbjct: 38 LSVAEASGLDLVEVSPNASPPVCKIMDYGKFKYQQTKKLQEAKKKASSFSVKEIKVRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K+ I FL + KVK++V FRGREI D GR +L +++ E + ++ P Sbjct: 98 GDHDLDTKIGHIKRFLANNDKVKVTVMFRGREIAFADRGRAMLKRVQDATAEFAVVEQFP 157 Query: 121 KFEGRQMIMILSSKC 135 KFEGR MIM+L+ K Sbjct: 158 KFEGRTMIMVLAPKA 172 >gi|207724052|ref|YP_002254450.1| translation initiation factor if-3 (partial sequence) protein [Ralstonia solanacearum MolK2] gi|206589261|emb|CAQ36223.1| probable translation initiation factor if-3 (partial sequence) protein [Ralstonia solanacearum MolK2] Length = 268 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 132 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 191 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 192 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 251 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L K Sbjct: 252 KMEGRQMVMMLMPK 265 >gi|115311715|sp|Q39VS8|IF3_GEOMG RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQSHVVVKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + F+ +G K K+++ FRGREI H + G L + +I+ I+ +P Sbjct: 96 DEHDLQFKIKHVRRFIEEGNKAKVTLVFRGREITHMEFGVRALERVASEIEDIAVIEMKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|317487454|ref|ZP_07946241.1| translation initiation factor IF-3 [Bilophila wadsworthia 3_1_6] gi|316921313|gb|EFV42612.1| translation initiation factor IF-3 [Bilophila wadsworthia 3_1_6] Length = 178 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 86/131 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLVE+ ++ P VC+++D K +Y QK EA+K+Q IKE+K+RP D Sbjct: 33 MAKEHGLDLVEVAATADPPVCRVMDYGKFKYETQKKKQEAKKRQTVVQIKEIKVRPKTDD 92 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K++ I FL DG +VK++V FRGREI+H+D G +L + ++ +++ EP+ Sbjct: 93 HDFETKVRHIKRFLEDGDRVKVTVFFRGREIVHKDRGLSILERVIADTKDVGKVEQEPRA 152 Query: 123 EGRQMIMILSS 133 EGR + M+L+ Sbjct: 153 EGRTLQMLLTP 163 >gi|78222624|ref|YP_384371.1| translation initiation factor IF-3 [Geobacter metallireducens GS-15] gi|78193879|gb|ABB31646.1| bacterial translation initiation factor 3 (bIF-3) [Geobacter metallireducens GS-15] Length = 143 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 7 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQSHVVVKEVKLRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + F+ +G K K+++ FRGREI H + G L + +I+ I+ +P Sbjct: 67 DEHDLQFKIKHVRRFIEEGNKAKVTLVFRGREITHMEFGVRALERVASEIEDIAVIEMKP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 127 KMEGRSMFMIVAPKV 141 >gi|187918064|ref|YP_001883627.1| translation initiation factor IF-3 [Borrelia hermsii DAH] gi|238689282|sp|B2RZQ1|IF3_BORHD RecName: Full=Translation initiation factor IF-3 gi|119860912|gb|AAX16707.1| bacterial protein translation initiation factor 3 (IF-3) [Borrelia hermsii DAH] Length = 186 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLVE+ +V P VCKI+D K ++ K E RK QK +KEV+M+P I Sbjct: 49 MRCARDAELDLVEVSPNVLPPVCKIIDYGKYKFHQGKRQKEQRKNQKIIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K + I GFL++G KVK++++FRGRE+ H LG +L I ER G+ + I P Sbjct: 109 DTHDLDFKYRNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILEGILERIGDANYILESP 168 Query: 121 -KFEGRQMIMILSSKC 135 K EG+ M ++++ K Sbjct: 169 AKMEGKTMFLVIAPKS 184 >gi|299144128|ref|ZP_07037208.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518613|gb|EFI42352.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 135 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV + + P VC+I+D K RY + K EA+KKQK +KE+++ P I+ Sbjct: 1 MAEEKKLDLVNVSPNSKPPVCRIMDYGKYRYDMIKKEREAKKKQKVINVKELRLTPSIET 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL+ K FL++G +VKISV+FRGRE+ H ++G+++L + E E +D +PK Sbjct: 61 NDLKTKANRAKEFLQNGDRVKISVRFRGREMGHTEMGKDVLDDFVELISEYGVVDKKPKI 120 Query: 123 EGRQMIMILSSKC 135 EG+ MIM LS K Sbjct: 121 EGKSMIMFLSPKT 133 >gi|328957060|ref|YP_004374446.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4] gi|328673384|gb|AEB29430.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4] Length = 173 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLV + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 37 LKLAEEANLDLVLVAPKAKPPVARIMDYGKFRFEQQKKEREARKNQKVISIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+ +G+E+L + + +IS I+ Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKSIGKEVLDRLAKETADISTIESAA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M +IL+ K Sbjct: 157 KMDGRSMFLILAPK 170 >gi|91784427|ref|YP_559633.1| translation initiation factor 3 [Burkholderia xenovorans LB400] gi|91688381|gb|ABE31581.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia xenovorans LB400] Length = 156 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP Sbjct: 20 FRMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKIVQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ P Sbjct: 80 DDGDYNVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|119510904|ref|ZP_01630027.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414] gi|119464432|gb|EAW45346.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414] Length = 177 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL LL + + + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEHLLKRMAKDLEPLGELQQAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPK 176 >gi|72162465|ref|YP_290122.1| translation initiation factor 3 [Thermobifida fusca YX] gi|71916197|gb|AAZ56099.1| bacterial translation initiation factor 3 (bIF-3) [Thermobifida fusca YX] Length = 179 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V K++D K +Y A EARK Q ST IKE+K+RP I Sbjct: 23 LRLAQEADLDLVEVAPTARPPVAKLMDYGKFKYESAVKAREARKNQSSTVIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVK+++ FRGRE +LG LL + E E+ +++ + Sbjct: 83 DQHDYETKKGHVERFLRSGDKVKVTIMFRGREQSRPELGYRLLRRLAEDVQELGQVESQA 142 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L Sbjct: 143 KQDGRNMVMVLGP 155 >gi|282896200|ref|ZP_06304223.1| Initiation factor 3 [Raphidiopsis brookii D9] gi|281198889|gb|EFA73767.1| Initiation factor 3 [Raphidiopsis brookii D9] Length = 177 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LRLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL LL+ + E FGEI + Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAETLLNRMATDLEPFGEIQQA- 161 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 162 --PKKEGRNMMMLISPK 176 >gi|282855602|ref|ZP_06264916.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455] gi|282586532|gb|EFB91786.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455] Length = 193 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/124 (48%), Positives = 78/124 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ P VC+ILD K RY QK +ARKKQK +KE+KMRP ID H Sbjct: 53 AEERELDLVEVAPDGNPPVCRILDFGKYRYQQQKRDKDARKKQKVQALKEIKMRPKIDEH 112 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K KA+ FL G +VK+S+ FRGRE+ D GRE+++ + + R+D EP+ E Sbjct: 113 DYDFKTKAVVKFLESGHRVKVSIFFRGREMAFLDKGREVINRVAADCAAVGRMDEEPRME 172 Query: 124 GRQM 127 GR M Sbjct: 173 GRYM 176 >gi|225024915|ref|ZP_03714107.1| hypothetical protein EIKCOROL_01803 [Eikenella corrodens ATCC 23834] gi|224942319|gb|EEG23528.1| hypothetical protein EIKCOROL_01803 [Eikenella corrodens ATCC 23834] Length = 193 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 58 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ + FL DG KVKI+++FRGRE+ HQ LG +LL +K E++ ++ P Sbjct: 118 DEGDYQIKMRNVTRFLTDGDKVKITLRFRGREMAHQHLGAQLLERVKADLAEVAAVEQFP 177 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 178 KMEGRQMVMMVAPK 191 >gi|317124675|ref|YP_004098787.1| bacterial translation initiation factor 3 (bIF-3) [Intrasporangium calvum DSM 43043] gi|315588763|gb|ADU48060.1| bacterial translation initiation factor 3 (bIF-3) [Intrasporangium calvum DSM 43043] Length = 209 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLVE+ P V K++D K +Y A EARK Q +T IKE+K+RP I Sbjct: 34 LRLAEEANLDLVEVAPMAKPPVAKLMDFGKFKYEAAMKAREARKNQVNTVIKEIKLRPKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+++ FRGRE +LGR LL + + E+ ++ P Sbjct: 94 DPHDYGTKKGHVERFLKAGDKVKVTIMFRGREQSRPELGRRLLERLADDIAELGYVESAP 153 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 154 KQDGRNMIMVIGP 166 >gi|284006266|emb|CBA71502.1| translation initiation factor IF-3 [Arsenophonus nasoniae] Length = 171 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQ+ +KE+K RP Sbjct: 35 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSLKEQKKKQRVIQVKEIKFRPGT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ IK ++S ++ P Sbjct: 95 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIDMLNRIKNDLDDMSVVESFP 154 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 155 SKIEGRQMIMVLAPK 169 >gi|160872850|ref|ZP_02062982.1| translation initiation factor IF-3 [Rickettsiella grylli] gi|159121649|gb|EDP46987.1| translation initiation factor IF-3 [Rickettsiella grylli] Length = 168 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 86/131 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA+LDLVEI + P VC+I++ K + + K +KKQK +KEVK RPV + Sbjct: 34 AEEASLDLVEIAPTAIPPVCRIMNYGKYLFELSKQRTAQKKKQKRIQLKEVKFRPVTEEG 93 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ + FL+ G K KI+V+FRGREI H LG +L+ +++ + ID +PK E Sbjct: 94 DYQVKLRNLIRFLQQGDKAKITVRFRGREIAHLHLGAKLIERLEKDLAAYAAIDDKPKME 153 Query: 124 GRQMIMILSSK 134 GRQM++++S K Sbjct: 154 GRQMVLVVSPK 164 >gi|311031378|ref|ZP_07709468.1| translation initiation factor IF-3 [Bacillus sp. m3-13] Length = 167 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LEIAARANLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKDKEARKNQKVISLKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E+S I+ P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSAACAEVSTIESHP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M +IL+ K Sbjct: 151 KMDGRSMFLILAPK 164 >gi|23099607|ref|NP_693073.1| translation initiation factor IF-3 [Oceanobacillus iheyensis HTE831] gi|22777837|dbj|BAC14108.1| translation initiation factor IF-3 [Oceanobacillus iheyensis HTE831] Length = 168 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV+ P I Sbjct: 31 LDIATTRNLDLVLVAPNAKPPVCRIMDYGKYRFEQQKKEKEARKKQKVINVKEVRFTPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KLK FL G KVK +V+FRGR I H++LGRE+L E ++ I+ +P Sbjct: 91 GDHDFETKLKNARKFLEKGDKVKAAVRFRGRAITHKELGREVLDRFAEEVKDLGTIETKP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 151 KMEGRNMFMMVAP 163 >gi|194017400|ref|ZP_03056012.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061] gi|194011268|gb|EDW20838.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061] Length = 154 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 18 LEIATKANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKDKEARKNQKIISLKEVRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 78 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 137 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 138 KMDGRSMFLMLAPK 151 >gi|220905883|ref|YP_002481194.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425] gi|219862494|gb|ACL42833.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425] Length = 179 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I++ K ++ +K A EARKKQ + +KEVKMR I Sbjct: 45 LRIAQEKELDLVLVAEKAEPPVCRIINYGKYKFEQEKKAREARKKQHTADVKEVKMRYRI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +V++ + FL+DG KVK ++ F+GREI H L ELL+ + ++ I P Sbjct: 105 DEHDYKVRINHAERFLKDGDKVKATITFKGREIQHSHLAEELLNRMAADLQAVAEIQQAP 164 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM+L+ K Sbjct: 165 KKEGRNMIMLLAPK 178 >gi|187924731|ref|YP_001896373.1| translation initiation factor IF-3 [Burkholderia phytofirmans PsJN] gi|187715925|gb|ACD17149.1| translation initiation factor IF-3 [Burkholderia phytofirmans PsJN] Length = 156 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP Sbjct: 20 FRMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKIVQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ P Sbjct: 80 DDGDYNVKLRNLIRFLDDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|294508833|ref|YP_003572892.1| translation initiation factor IF-3 [Salinibacter ruber M8] gi|294345162|emb|CBH25940.1| Translation initiation factor IF-3 [Salinibacter ruber M8] Length = 200 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 60/130 (46%), Positives = 82/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ P VCKILD K RY QK RKK KS +KE++ RP + H Sbjct: 67 ARDHELDLVEVAPDADPPVCKILDYGKYRYEKQKEEQRRRKKSKSMEMKELRFRPRTEEH 126 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+ FL DG KVK V+F+GR+I+++D G +LL + E EI+RID +P+ E Sbjct: 127 DFNFKVDHAREFLEDGNKVKAYVQFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQPEME 186 Query: 124 GRQMIMILSS 133 GR+M+MIL+ Sbjct: 187 GRRMVMILAP 196 >gi|229543584|ref|ZP_04432644.1| translation initiation factor IF-3 [Bacillus coagulans 36D1] gi|229328004|gb|EEN93679.1| translation initiation factor IF-3 [Bacillus coagulans 36D1] Length = 213 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P V +I+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 76 LEIAARANLDLVLVAPNAKPPVARIMDYGKYRFEMQKKDREARKKQKIINVKEVRLSPTI 135 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+D+G+ +L E E++ ++ +P Sbjct: 136 EEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKDIGQRVLDRFAEACAEVATVESKP 195 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 196 KMDGRSMFLVLAPKT 210 >gi|29427472|sp|Q8EPF5|IF3_OCEIH RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV+ P I Sbjct: 35 LDIATTRNLDLVLVAPNAKPPVCRIMDYGKYRFEQQKKEKEARKKQKVINVKEVRFTPGI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KLK FL G KVK +V+FRGR I H++LGRE+L E ++ I+ +P Sbjct: 95 GDHDFETKLKNARKFLEKGDKVKAAVRFRGRAITHKELGREVLDRFAEEVKDLGTIETKP 154 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 155 KMEGRNMFMMVAP 167 >gi|74317026|ref|YP_314766.1| translation initiation factor 3 [Thiobacillus denitrificans ATCC 25259] gi|74056521|gb|AAZ96961.1| initiation factor 3 [Thiobacillus denitrificans ATCC 25259] Length = 155 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA+LDLVEI + P V KI+D K +Y K EA+ KQK IKE+K RP Sbjct: 20 LRQAEEADLDLVEIAPTAQPPVAKIMDYGKFKYQESKKQHEAKLKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K KI+++FRGRE+ HQ++G L + E++ ++ P Sbjct: 80 DEGDYQIKLRNLIKFLEEGDKTKITLRFRGREMAHQEIGMAQLRRVSTDLAELAVVEQFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+L+ K Sbjct: 140 KMEGRQLVMMLAPK 153 >gi|163790750|ref|ZP_02185176.1| translation initiation factor IF-3 [Carnobacterium sp. AT7] gi|159873930|gb|EDP68008.1| translation initiation factor IF-3 [Carnobacterium sp. AT7] Length = 173 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLV + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 37 LKLAEEANLDLVLVAPKAKPPVARIMDHGKFRFEQQKKEREARKNQKVISIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+ +G+E+L + + +IS I+ Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKGIGKEVLDRLAKETADISTIESAA 156 Query: 121 KFEGRQMIMILSSKC 135 K +GR M +IL+ K Sbjct: 157 KMDGRSMFLILAPKT 171 >gi|282901427|ref|ZP_06309352.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505] gi|281193706|gb|EFA68678.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505] Length = 177 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/137 (45%), Positives = 88/137 (64%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LRLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRID 117 + HD V++K + FL+DG KVK +V FRGREI H DL LL+ + E FGE+ + Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAETLLNRMATDLEPFGEVQQA- 161 Query: 118 CEPKFEGRQMIMILSSK 134 PK EGR M+M++S K Sbjct: 162 --PKKEGRNMMMLISPK 176 >gi|332701962|ref|ZP_08422050.1| Translation initiation factor IF-3 [Desulfovibrio africanus str. Walvis Bay] gi|332552111|gb|EGJ49155.1| Translation initiation factor IF-3 [Desulfovibrio africanus str. Walvis Bay] Length = 175 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 82/131 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE+ + P VC+I+D K +Y QK ARKK IKE+K RP Sbjct: 38 LRTAQEQGLDLVEVAPNSEPPVCRIMDYGKYKYEQQKKTQGARKKSSQVQIKEIKFRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I F+ DG + K + FRGREI+H+D G +L + E +I++++ EP Sbjct: 98 DEHDYQTKVKHIRRFIEDGDRCKAVIFFRGREIVHKDRGLVILKRVAEDLKDIAKVEQEP 157 Query: 121 KFEGRQMIMIL 131 +FEGR M M+L Sbjct: 158 QFEGRTMNMML 168 >gi|209516674|ref|ZP_03265527.1| translation initiation factor IF-3 [Burkholderia sp. H160] gi|295677047|ref|YP_003605571.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1002] gi|307730401|ref|YP_003907625.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1003] gi|323526735|ref|YP_004228888.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1001] gi|209502949|gb|EEA02952.1| translation initiation factor IF-3 [Burkholderia sp. H160] gi|295436890|gb|ADG16060.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1002] gi|307584936|gb|ADN58334.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1003] gi|323383737|gb|ADX55828.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1001] Length = 156 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +M+++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP Sbjct: 20 FRMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ P Sbjct: 80 DDGDYNVKLRNLVRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|227497641|ref|ZP_03927859.1| possible translation initiation factor IF3 [Actinomyces urogenitalis DSM 15434] gi|226832912|gb|EEH65295.1| possible translation initiation factor IF3 [Actinomyces urogenitalis DSM 15434] Length = 194 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ P VCK++D K +Y A +AR+ Q +T +KEV+ RP I Sbjct: 20 LRLAEEAGLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEVQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ ++ FL+ G KVK V+FRGRE +LG LL + E G++ ++ P Sbjct: 80 DQHDYATKMGHVERFLKGGDKVKCVVRFRGREQSRPELGIRLLQRVAEEIGDLGTVESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GRQM+M+L+ Sbjct: 140 RQDGRQMVMVLAP 152 >gi|260655004|ref|ZP_05860492.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1] gi|260630319|gb|EEX48513.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1] Length = 182 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LD+VE+ P VC+++D K RY QK +ARKKQK +KE+KMRP I Sbjct: 41 IHIASERELDVVEVAPDGKPPVCRVMDYGKYRYQQQKRVKDARKKQKVQALKEMKMRPKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K +AI FL G +VK+SV FRGRE+ D GR++L+ + E+ R++ EP Sbjct: 101 DEHDYDFKTRAIAKFLETGHRVKVSVFFRGREMAFLDKGRDVLNRVAADVAEVGRMEGEP 160 Query: 121 KFEGRQMIMILSS 133 + EGR M + + Sbjct: 161 RMEGRYMRAMFAP 173 >gi|257871007|ref|ZP_05650660.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2] gi|257805171|gb|EEV33993.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2] Length = 173 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLD+V + + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 LQIAERANLDVVLVAPNAKPPVARIMDYGKYRFEQQKKDREARKKQKVINIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +++ ++ +P Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADLASVEQKP 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 157 KMDGRSMFLVLSPK 170 >gi|83815747|ref|YP_446894.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855] gi|83757141|gb|ABC45254.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855] Length = 153 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/130 (46%), Positives = 82/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ P VCKILD K RY QK RKK KS +KE++ RP + H Sbjct: 20 ARDHELDLVEVAPDADPPVCKILDYGKYRYEKQKEEQRRRKKSKSMEMKELRFRPRTEEH 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+ FL DG KVK V+F+GR+I+++D G +LL + E EI+RID +P+ E Sbjct: 80 DFNFKVDHAREFLEDGNKVKAYVQFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQPEME 139 Query: 124 GRQMIMILSS 133 GR+M+MIL+ Sbjct: 140 GRRMVMILAP 149 >gi|317052583|ref|YP_004113699.1| translation initiation factor IF-3 [Desulfurispirillum indicum S5] gi|316947667|gb|ADU67143.1| translation initiation factor IF-3 [Desulfurispirillum indicum S5] Length = 156 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVE+ + P VCKI+D K Y K EA+K QK IKEVK RP I Sbjct: 20 LEAAHNRGLDLVEVAPAAKPPVCKIMDFGKFAYEQSKKQKEAKKNQKLIVIKEVKFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL DG KVK+++ +RGRE+ H ++GRE+L+ + + ++ P Sbjct: 80 EEHDYNFKLKHAQRFLEDGAKVKVTIMYRGREMAHTEIGREILNKVVADMEGLCTVEAPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M M+L+ Sbjct: 140 KLEGRNMTMMLAP 152 >gi|114799954|ref|YP_759158.1| translation initiation factor IF-3 [Hyphomonas neptunium ATCC 15444] gi|122942761|sp|Q0C535|IF3_HYPNA RecName: Full=Translation initiation factor IF-3 gi|114740128|gb|ABI78253.1| translation initiation factor IF-3 [Hyphomonas neptunium ATCC 15444] Length = 180 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 63/127 (49%), Positives = 90/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLVE+ + V KILD KLR+ +K ARKKQKS+ +KE+K+RP ID HD +V Sbjct: 54 SMDLVEVSAGQETPVVKILDYGKLRFEERKKKAAARKKQKSSELKEIKIRPNIDTHDYEV 113 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K +AI F +G KVKI+++FRGRE+ HQ LG ELL +K+ F E ++++ EPK EG+QM Sbjct: 114 KARAIARFFEEGDKVKITLRFRGREMAHQHLGMELLEKVKKDFEETAKVELEPKLEGKQM 173 Query: 128 IMILSSK 134 M+L+ + Sbjct: 174 TMVLAPR 180 >gi|82701622|ref|YP_411188.1| translation initiation factor IF-3 [Nitrosospira multiformis ATCC 25196] gi|82409687|gb|ABB73796.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosospira multiformis ATCC 25196] Length = 184 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 83/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA +DLVEI + P VC+++D K RY K EA+ KQK IKEVK RP D Sbjct: 22 LAEEAEVDLVEIAPTAKPPVCRLMDYGKFRYQESKKKHEAKLKQKQIQIKEVKFRPNTDE 81 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D +KL+ + FL +G K KI+++FRGRE+ HQ+ G LL IK + ++ PK Sbjct: 82 GDYNIKLRNLISFLDEGDKAKITLRFRGREMAHQEFGVRLLERIKGDLESHAIVEQFPKM 141 Query: 123 EGRQMIMILSSK 134 EGRQM+M+LS + Sbjct: 142 EGRQMVMVLSPR 153 >gi|220928736|ref|YP_002505645.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|219999064|gb|ACL75665.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 164 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K + + K EARK QK IKEV+ P I+ Sbjct: 31 KLANSKNLDLVKIAPQGVPPVCKIMDYGKYLFELAKKEKEARKNQKIISIKEVRFSPSIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+DG KVK+SVKFRGRE+ + +G ++L E ++ ++ PK Sbjct: 91 NHDFEFKVKNAYKFLKDGDKVKVSVKFRGREMHYTSIGNQILDKFAEAVKDVGTVERRPK 150 Query: 122 FEGRQMIMILSSK 134 EG+ MIMIL+ K Sbjct: 151 LEGKSMIMILNPK 163 >gi|16079939|ref|NP_390765.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] gi|238054379|sp|P55872|IF3_BACSU RecName: Full=Translation initiation factor IF-3 gi|1770007|emb|CAA99616.1| translation initiation factor IF3 [Bacillus subtilis] gi|2635352|emb|CAB14847.1| initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] Length = 173 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 36 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKEKEARKNQKIINLKEVRLSPTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 96 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 155 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 156 KMDGRSMFLMLAPK 169 >gi|221310829|ref|ZP_03592676.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] gi|221315154|ref|ZP_03596959.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320072|ref|ZP_03601366.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324354|ref|ZP_03605648.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. SMY] gi|296331561|ref|ZP_06874030.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675480|ref|YP_003867152.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii str. W23] gi|308174583|ref|YP_003921288.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7] gi|321312421|ref|YP_004204708.1| translation initiation factor IF-3 [Bacillus subtilis BSn5] gi|291485321|dbj|BAI86396.1| translation initiation factor IF-3 [Bacillus subtilis subsp. natto BEST195] gi|296151156|gb|EFG92036.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413724|gb|ADM38843.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii str. W23] gi|307607447|emb|CBI43818.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7] gi|320018695|gb|ADV93681.1| translation initiation factor IF-3 [Bacillus subtilis BSn5] gi|328554506|gb|AEB24998.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens TA208] gi|328912910|gb|AEB64506.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens LL3] Length = 167 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 30 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKEKEARKNQKIINLKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPK 163 >gi|39996616|ref|NP_952567.1| translation initiation factor IF-3 [Geobacter sulfurreducens PCA] gi|81702455|sp|Q74D03|IF3_GEOSL RecName: Full=Translation initiation factor IF-3 gi|39983497|gb|AAR34890.1| translation initiation factor IF-3 [Geobacter sulfurreducens PCA] gi|307634866|gb|ADI84352.2| translation initiation factor IF-3 [Geobacter sulfurreducens KN400] Length = 172 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EARKKQ +KEVK+RP Sbjct: 36 LALAEARQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEARKKQSHVQVKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K + F+ +G K K+++ FRGREI H + G L + +I+ ++ +P Sbjct: 96 DEHDLMTKIKHVRRFIEEGNKAKVTLVFRGREITHLEFGSRALDRVAAELEDIAVVEFKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|256847509|ref|ZP_05552955.1| translation initiation factor IF-3 [Lactobacillus coleohominis 101-4-CHN] gi|256716173|gb|EEU31148.1| translation initiation factor IF-3 [Lactobacillus coleohominis 101-4-CHN] Length = 174 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 87/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + P+V +I+D K R+ +QK EARK QK+ +KE+++ P I Sbjct: 31 LQLAEDADLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKNQKTQAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL + F+ G KV++S++FRGR I H+D+GR+++ + + +I+ + P Sbjct: 91 DTNDFNVKLNRVRKFIAKGDKVRVSLRFRGRAITHKDIGRDMIEKMADETKDIATVVQRP 150 Query: 121 KFEGRQMIMILS 132 K EGR M + L+ Sbjct: 151 KMEGRSMFLTLA 162 >gi|224531854|ref|ZP_03672486.1| translation initiation factor IF-3 [Borrelia valaisiana VS116] gi|224511319|gb|EEF81725.1| translation initiation factor IF-3 [Borrelia valaisiana VS116] Length = 186 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL++G KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILTFLKEGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|238021045|ref|ZP_04601471.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147] gi|237868025|gb|EEP69031.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147] Length = 155 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 MSMAEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL DG KVKI+++FRGRE+ HQ +G +LL +K E ++I+ P Sbjct: 80 DDGDYNIKMRKVREFLTDGDKVKITLRFRGREMAHQQIGAQLLERVKADVAEEAQIESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMMLAPK 153 >gi|254498719|ref|ZP_05111435.1| truncated translation initiation factor IF-3 [Legionella drancourtii LLAP12] gi|254352047|gb|EET10866.1| truncated translation initiation factor IF-3 [Legionella drancourtii LLAP12] Length = 129 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 84/126 (66%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQDLG ++L I++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQDLGMKILERIQQDTADVAVVEQHAKREGRQLL 120 Query: 129 MILSSK 134 M+LS K Sbjct: 121 MVLSPK 126 >gi|225389792|ref|ZP_03759516.1| hypothetical protein CLOSTASPAR_03540 [Clostridium asparagiforme DSM 15981] gi|225044150|gb|EEG54396.1| hypothetical protein CLOSTASPAR_03540 [Clostridium asparagiforme DSM 15981] Length = 183 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A LDLV+I + P VCKI+D K RY + EARKKQK IKEV++ P I Sbjct: 49 LKLAQDAELDLVKIAPTAKPPVCKIIDYGKFRYENARKEKEARKKQKVIEIKEVRLSPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ +D Sbjct: 109 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMYKSKYILDDFAESLADIAVVDKPS 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 169 KVEGRSMVMFLTAK 182 >gi|254468803|ref|ZP_05082209.1| translation initiation factor IF-3 [beta proteobacterium KB13] gi|207087613|gb|EDZ64896.1| translation initiation factor IF-3 [beta proteobacterium KB13] Length = 157 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 81/130 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + + DLVEI P VC+++D K +Y K EAR KQK+ +KEVK RP D Sbjct: 10 ADDFDTDLVEIAPKAEPPVCRLMDYGKFKYAQSKKLHEARMKQKNVQVKEVKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL DG K K++++FRGREI HQ LG +LL ++ E + ++ PK E Sbjct: 70 DYNVKLRNLIRFLTDGDKAKVTLRFRGREIAHQQLGMDLLKRVETDLEEYAVVEQFPKME 129 Query: 124 GRQMIMILSS 133 GRQM+M+LS Sbjct: 130 GRQMVMVLSP 139 >gi|116747873|ref|YP_844560.1| translation initiation factor IF-3 [Syntrophobacter fumaroxidans MPOB] gi|116696937|gb|ABK16125.1| translation initiation factor IF-3 [Syntrophobacter fumaroxidans MPOB] Length = 171 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVE+ + P VCKI+D K +Y K EA+KKQ +KEVK+RP Sbjct: 37 LELAAQDELDLVEVAPNADPPVCKIMDYGKFKYQQNKRTQEAKKKQTVIQVKEVKIRPKT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL VK++ I FL K K+++ FRGREI + D G ++L ++E E + I+ P Sbjct: 97 DEHDLLVKIRHIKRFLAQKDKAKVTILFRGREIAYTDQGTKVLERVREELKEDAVIEQPP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+MIL+ K Sbjct: 157 KMEGRNMVMILAPKA 171 >gi|325982724|ref|YP_004295126.1| Translation initiation factor IF-3 [Nitrosomonas sp. AL212] gi|325532243|gb|ADZ26964.1| Translation initiation factor IF-3 [Nitrosomonas sp. AL212] Length = 184 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 84/131 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A++A +DLVEI + P VC+++D K RY K +A+ KQK IKE+K RP D Sbjct: 33 LAEDAGVDLVEIAPTAQPPVCRLMDYGKFRYQESKKKHDAKLKQKQVQIKEIKFRPNTDE 92 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D +KL+ + FL +G KVK++++FRGRE+ HQ+ G LL +K+ + ++ PK Sbjct: 93 GDYNIKLRNLISFLDEGDKVKVTLRFRGREMAHQEFGMRLLERVKDDLESFAIVEQFPKM 152 Query: 123 EGRQMIMILSS 133 EGRQM+M+LS Sbjct: 153 EGRQMVMVLSP 163 >gi|296283260|ref|ZP_06861258.1| translation initiation factor IF-3 [Citromicrobium bathyomarinum JL354] Length = 113 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/113 (49%), Positives = 81/113 (71%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 +CK LD+ K RY QK A ARK QK+ IKEVKMRP ID HD VK++ + F+ +G K Sbjct: 1 MCKFLDVGKHRYEAQKKANLARKTQKTQDIKEVKMRPNIDTHDYDVKMRNVVKFIENGDK 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 VK +++FRGRE+ HQ LG +LL+ +++ EI++++ P+ EGRQM+M+L+ K Sbjct: 61 VKCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPRLEGRQMLMVLAPK 113 >gi|256394619|ref|YP_003116183.1| translation initiation factor IF-3 [Catenulispora acidiphila DSM 44928] gi|256360845|gb|ACU74342.1| translation initiation factor IF-3 [Catenulispora acidiphila DSM 44928] Length = 250 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P V K++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LRLAQEQDLDLVEVAATARPPVVKVMDYGKYKYESALKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LGR LLS + E E+ ++ P Sbjct: 95 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGRRLLSKLAEDVAELGFVEFAP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|294501488|ref|YP_003565188.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551] gi|295706836|ref|YP_003599911.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319] gi|294351425|gb|ADE71754.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551] gi|294804495|gb|ADF41561.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319] Length = 167 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + ++ P VC+I+D K RY Q+ EARK QK +KEV++ P I Sbjct: 31 LEIASRVNLDLVMVAANAKPPVCRIMDYGKFRYEQQRKEREARKNQKVVNLKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+ +G+++L + ++S ++ P Sbjct: 91 DEHDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKGIGQKVLERFSQACEDVSSVESAP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|257867128|ref|ZP_05646781.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC30] gi|257873462|ref|ZP_05653115.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC10] gi|257877206|ref|ZP_05656859.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC20] gi|325568471|ref|ZP_08144838.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC 12755] gi|257801184|gb|EEV30114.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC30] gi|257807626|gb|EEV36448.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC10] gi|257811372|gb|EEV40192.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC20] gi|325158240|gb|EGC70393.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC 12755] Length = 173 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLD+V + + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 LQIAERANLDVVLVAPNAKPPVARIMDYGKFRFEQQKKDREARKKQKVINIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +++ ++ +P Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADLATVEQKP 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPK 170 >gi|154687021|ref|YP_001422182.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens FZB42] gi|311069382|ref|YP_003974305.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942] gi|154352872|gb|ABS74951.1| InfC [Bacillus amyloliquefaciens FZB42] gi|310869899|gb|ADP33374.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942] Length = 167 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 30 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKDKEARKNQKIINLKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPK 163 >gi|262091710|gb|ACY25300.1| translation initiation factor IF-3 [uncultured actinobacterium] Length = 239 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLVE+ + P VC+I+D K RY + E+RKK +KEVK RP I Sbjct: 67 LERARTAELDLVEVAAQADPPVCRIMDYGKFRYEESQRLKESRKKTVQITMKEVKFRPKI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K++ + FL +G KVK++++FRGRE+ H +LGR++L + E+ G I+R+D Sbjct: 127 GKGDFDTKVRHMHEFLGEGHKVKVTLQFRGREVAHPELGRKILDAVIEQLGPIARVDTMA 186 Query: 121 KFEGRQMIMILSSK 134 + EGR M M+LS + Sbjct: 187 RLEGRNMTMVLSPE 200 >gi|262091799|gb|ACY25387.1| bacterial translation initiation factor 3 [uncultured actinobacterium] Length = 177 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E LDLVEI P VCKI+D K +Y + + A EAR+ Q +KEV+M P I Sbjct: 18 LKMADEVGLDLVEIAPDANPPVCKIMDFGKYKYEVAQKAREARQNQTHIVVKEVRMTPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K ++ FL+ G KVK+++KFRGRE +LG ++L + E E+ ++ P Sbjct: 78 ENHDYETKRSQVEKFLKGGDKVKVTMKFRGREQTRPELGYKMLQRLAEDIAEVGFVEFAP 137 Query: 121 KFEGRQMIMILSS 133 K EGR M M+L Sbjct: 138 KQEGRNMTMVLGP 150 >gi|184155787|ref|YP_001844127.1| translation initiation factor IF-3 [Lactobacillus fermentum IFO 3956] gi|227515619|ref|ZP_03945668.1| translation initiation factor IF3 [Lactobacillus fermentum ATCC 14931] gi|260663496|ref|ZP_05864386.1| translation initiation factor IF-3 [Lactobacillus fermentum 28-3-CHN] gi|183227131|dbj|BAG27647.1| translation initiation factor IF-3 [Lactobacillus fermentum IFO 3956] gi|227086049|gb|EEI21361.1| translation initiation factor IF3 [Lactobacillus fermentum ATCC 14931] gi|260552037|gb|EEX25090.1| translation initiation factor IF-3 [Lactobacillus fermentum 28-3-CHN] Length = 169 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A LDLV + P+V +I+D K R+ +QK EARK QK+ +KE+++ P I Sbjct: 31 LQLAEDAGLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKNQKTVAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL + F+ G +V++S++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLGRVRKFIEKGDQVRVSLRFRGRAITHKDIGRDMIERMAEETKDIATVVQRP 150 Query: 121 KFEGRQMIMILS 132 K EGR M + L+ Sbjct: 151 KMEGRSMFLTLA 162 >gi|147678290|ref|YP_001212505.1| translation initiation factor 3 [Pelotomaculum thermopropionicum SI] gi|146274387|dbj|BAF60136.1| translation initiation factor 3 [Pelotomaculum thermopropionicum SI] Length = 156 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ + P VC+I+D K +Y K EARKKQK IKEVK+RP I Sbjct: 20 LRLAEERQLDLVEVAPAAKPPVCRIMDFGKYKYEQSKREKEARKKQKIINIKEVKLRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK + FL+DG KVK ++ FRGREI+H LG++LL + E + S ++ +P Sbjct: 80 EDHDFEVKARNTVRFLKDGDKVKATIIFRGREIVHTQLGQQLLLRLAEYAKDFSSVERQP 139 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 140 KLEGKNMIMILAPK 153 >gi|71281686|ref|YP_269609.1| translation initiation factor IF-3 [Colwellia psychrerythraea 34H] gi|71147426|gb|AAZ27899.1| translation initiation factor IF-3 [Colwellia psychrerythraea 34H] Length = 185 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A +A +DLVEI + P VC+++D K Y K E RK QK +KE+K RP Sbjct: 49 MDQADDAGVDLVEISPTAKPPVCRVMDYGKFIYEKAKEQKEQRKNQKQIQVKEIKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G KVK++++FRGRE+ HQ+LG +LL+ +K E++ ++ P Sbjct: 109 DEGDYQVKLRNLKRFLEGGDKVKVTLRFRGREMAHQELGLQLLTRVKNDLEELTVLEFFP 168 Query: 121 -KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 169 RRAEGRQMVMVLAPK 183 >gi|295696883|ref|YP_003590121.1| translation initiation factor IF-3 [Bacillus tusciae DSM 2912] gi|295412485|gb|ADG06977.1| translation initiation factor IF-3 [Bacillus tusciae DSM 2912] Length = 174 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E NLDLV + + P VC+I+D K +Y K EAR+ QK +KEV++ P I Sbjct: 37 LRIAAEKNLDLVNVAPTAKPPVCRIMDYGKYKYEQSKRDKEARRNQKIVSLKEVRLTPNI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+A+ FL G KVK +V+FRGREI H +G+ +L + + + ++ P Sbjct: 97 EDHDFQTKLRAVVRFLEQGDKVKATVRFRGREITHTRIGQGILERMAKEVENLCVVERPP 156 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 157 KLEGRNMIMILAPK 170 >gi|186476315|ref|YP_001857785.1| translation initiation factor IF-3 [Burkholderia phymatum STM815] gi|184192774|gb|ACC70739.1| translation initiation factor IF-3 [Burkholderia phymatum STM815] Length = 156 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP Sbjct: 20 FRLSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ P Sbjct: 80 DDGDYNVKLRNLVRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPK 153 >gi|42783752|ref|NP_980999.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987] gi|49187466|ref|YP_030718.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne] gi|49481334|ref|YP_038621.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140934|ref|YP_085896.1| translation initiation factor IF-3 [Bacillus cereus E33L] gi|118479723|ref|YP_896874.1| translation initiation factor IF-3 [Bacillus thuringiensis str. Al Hakam] gi|170708689|ref|ZP_02899127.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389] gi|177653087|ref|ZP_02935374.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174] gi|222098037|ref|YP_002532094.1| translation initiation factor if-3 [Bacillus cereus Q1] gi|225866552|ref|YP_002751930.1| translation initiation factor IF-3 [Bacillus cereus 03BB102] gi|229602129|ref|YP_002868854.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248] gi|254736683|ref|ZP_05194389.1| translation initiation factor IF-3 [Bacillus anthracis str. Western North America USA6153] gi|254741721|ref|ZP_05199408.1| translation initiation factor IF-3 [Bacillus anthracis str. Kruger B] gi|301056081|ref|YP_003794292.1| translation initiation factor IF-3 [Bacillus anthracis CI] gi|42739682|gb|AAS43607.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987] gi|49181393|gb|AAT56769.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne] gi|49332890|gb|AAT63536.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974403|gb|AAU15953.1| translation initiation factor IF-3 [Bacillus cereus E33L] gi|118418948|gb|ABK87367.1| bacterial translation initiation factor 3 (bIF-3) [Bacillus thuringiensis str. Al Hakam] gi|170126369|gb|EDS95258.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389] gi|172081611|gb|EDT66682.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174] gi|221242095|gb|ACM14805.1| translation initiation factor IF-3 [Bacillus cereus Q1] gi|225789540|gb|ACO29757.1| translation initiation factor IF-3 [Bacillus cereus 03BB102] gi|229266537|gb|ACQ48174.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248] gi|300378250|gb|ADK07154.1| translation initiation factor IF-3 [Bacillus cereus biovar anthracis str. CI] gi|324328468|gb|ADY23728.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 195 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 59 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 119 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 178 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 179 KMEGRSMFLVLAPK 192 >gi|330836892|ref|YP_004411533.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta coccoides DSM 17374] gi|329748795|gb|AEC02151.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta coccoides DSM 17374] Length = 195 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 3/135 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++ LDLVE+ + P VCKILD K RY +K EA+K Q T IKEV+M+P I Sbjct: 36 VQMAEDLGLDLVEVSPNANPPVCKILDFGKYRYEQEKRMREAKKNQTVTKIKEVRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE--ISRI-D 117 + HD++ K +AI FL +G KVKISV+FRGRE+ H +LG+ +L I + G+ +S I + Sbjct: 96 EKHDMETKSRAITEFLGEGNKVKISVRFRGRELAHTELGKVVLDKILDVLGQNNVSYILE 155 Query: 118 CEPKFEGRQMIMILS 132 K EGR M + ++ Sbjct: 156 RSAKMEGRMMSITVA 170 >gi|307325422|ref|ZP_07604624.1| translation initiation factor IF-3 [Streptomyces violaceusniger Tu 4113] gi|306888891|gb|EFN19875.1| translation initiation factor IF-3 [Streptomyces violaceusniger Tu 4113] Length = 177 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 7 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 67 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQELGFVESSP 126 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 127 KQDGRNMIMVLGP 139 >gi|225574524|ref|ZP_03783134.1| hypothetical protein RUMHYD_02601 [Blautia hydrogenotrophica DSM 10507] gi|225038255|gb|EEG48501.1| hypothetical protein RUMHYD_02601 [Blautia hydrogenotrophica DSM 10507] Length = 177 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQEA LDLV+I P VCKI+D K +Y + + EARKKQK +KEV++ P I Sbjct: 43 MLKAQEAGLDLVKIAPQAKPPVCKIIDYGKYKYELARKEKEARKKQKIIDVKEVRLSPNI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL+ K+ A FL G +VK++++FRGRE+ H + +L + E+ +++ ++ P Sbjct: 103 DTNDLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMHSSKHVLDDFAEQLKDVATVEKAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 163 KVEGRSMTMFLTEK 176 >gi|161524951|ref|YP_001579963.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|189350301|ref|YP_001945929.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|221197734|ref|ZP_03570780.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2M] gi|221204708|ref|ZP_03577725.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2] gi|221214903|ref|ZP_03587871.1| translation initiation factor IF-3 [Burkholderia multivorans CGD1] gi|160342380|gb|ABX15466.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|189334323|dbj|BAG43393.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|221165130|gb|EED97608.1| translation initiation factor IF-3 [Burkholderia multivorans CGD1] gi|221175565|gb|EEE07995.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2] gi|221181666|gb|EEE14067.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2M] Length = 156 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 85/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI +P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|27904623|ref|NP_777749.1| translation initiation factor IF-3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427412|sp|P59446|IF3_BUCBP RecName: Full=Translation initiation factor IF-3 gi|27904020|gb|AAO26854.1| translation initiation factor IF-3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 181 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E +DLVEI + P VC+I++ K Y K+ E RKKQK IKE+K RP D Sbjct: 48 AEEVGMDLVEISPNSEPPVCRIMNYGKFLYEKSKSIKEQRKKQKVRNIKEIKFRPNTDEG 107 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D +VKL+ + FL +G KVK++++FRGRE++HQ LG ++L+ IK E++ ++ P + Sbjct: 108 DYKVKLRNLVRFLEEGDKVKVTLRFRGREMVHQKLGIDVLNRIKSDLIELAVVEVFPSRV 167 Query: 123 EGRQMIMILSSK 134 EGRQMIMIL+SK Sbjct: 168 EGRQMIMILTSK 179 >gi|310827809|ref|YP_003960166.1| hypothetical protein ELI_2220 [Eubacterium limosum KIST612] gi|308739543|gb|ADO37203.1| hypothetical protein ELI_2220 [Eubacterium limosum KIST612] Length = 195 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLV++ + P VCKILD K RY + EA+K QK+ IKE++M ++ Sbjct: 60 KLADEKSLDLVKVSPNAKPPVCKILDYGKFRYEEMRRVKEAKKNQKAVVIKEIRMSVRVE 119 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ VK+K FL G +VK+S++FRGRE+ + D GR +L + ER + +D PK Sbjct: 120 EHDIMVKIKNCIKFLEQGNRVKVSIRFRGREMAYTDQGRGVLLDFAERVTDYGTVDKPPK 179 Query: 122 FEGRQMIMILSSK 134 EGR M+M LS K Sbjct: 180 MEGRSMVMFLSPK 192 >gi|30264645|ref|NP_847022.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames] gi|47778330|ref|YP_021465.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames Ancestor'] gi|65321943|ref|ZP_00394902.1| COG0290: Translation initiation factor 3 (IF-3) [Bacillus anthracis str. A2012] gi|30259320|gb|AAP28508.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames] gi|47552035|gb|AAT33940.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames Ancestor'] Length = 186 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 50 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 110 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 170 KMEGRSMFLVLAPK 183 >gi|297155954|gb|ADI05666.1| translation initiation factor IF-3 [Streptomyces bingchenggensis BCW-1] Length = 250 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 80 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 139 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 140 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQELGFVESNP 199 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 200 KQDGRNMIMVLGP 212 >gi|229175284|ref|ZP_04302799.1| Translation initiation factor IF-3 [Bacillus cereus MM3] gi|228608116|gb|EEK65423.1| Translation initiation factor IF-3 [Bacillus cereus MM3] Length = 186 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 50 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 110 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 170 KMEGRSMFLVLAPK 183 >gi|56751447|ref|YP_172148.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 6301] gi|81298876|ref|YP_399084.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 7942] gi|56686406|dbj|BAD79628.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 6301] gi|81167757|gb|ABB56097.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus elongatus PCC 7942] Length = 184 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 47 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKRAREARKKQHNVEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H DL ++LL + E+ + P Sbjct: 107 DEHDYQVRVNQAQRFLKAGDKVKATITFRGREIQHTDLAQQLLMRLASDLKELGEVQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+L K Sbjct: 167 KKEGRNMMMMLGPK 180 >gi|218667856|ref|YP_002426992.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520069|gb|ACK80655.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 172 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/126 (42%), Positives = 83/126 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI P VC+I+D K R+ K +A+++QK T +KE+K RP D D Q+K Sbjct: 45 LDLVEIAPQADPPVCRIMDYGKFRFQESKRQHDAKRRQKQTQVKEIKFRPRTDDADYQIK 104 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ I F+ DG + KI+++FRGRE+ H +LG ELL+ ++ E+ ++ P+ EGRQM+ Sbjct: 105 LRNILRFIEDGDRAKITLRFRGREMSHPELGMELLNRVERDLTEVGVVEQRPRMEGRQMV 164 Query: 129 MILSSK 134 MI++ + Sbjct: 165 MIVAPR 170 >gi|203284111|ref|YP_002221851.1| translation initiation factor IF-3 [Borrelia duttonii Ly] gi|203287649|ref|YP_002222664.1| translation initiation factor IF-3 [Borrelia recurrentis A1] gi|238690554|sp|B5RL16|IF3_BORDL RecName: Full=Translation initiation factor IF-3 gi|238690585|sp|B5RR09|IF3_BORRA RecName: Full=Translation initiation factor IF-3 gi|201083554|gb|ACH93145.1| translation initiation factor IF-3 [Borrelia duttonii Ly] gi|201084869|gb|ACH94443.1| translation initiation factor IF-3 [Borrelia recurrentis A1] Length = 186 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVEI + P VCKI+D K ++ +K E RK QK +KEV+M+P ID H Sbjct: 52 ARDVELDLVEISPNALPPVCKIIDYGKYKFHQEKRQKEQRKNQKIIKLKEVRMQPKIDTH 111 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 DL K K I GFL++G KVK++++FRGRE+ H LG +L +I ER G+ + + P K Sbjct: 112 DLDFKYKNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILESILERVGDSNYVLESPAKM 171 Query: 123 EGRQMIMILSSKC 135 EG+ M +I++ K Sbjct: 172 EGKTMFLIIAPKS 184 >gi|40062681|gb|AAR37594.1| translation initiation factor IF-3 [uncultured marine bacterium 314] Length = 181 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDL+EI P VCKI D+ K RY +QK A +A+KKQK +KE+K+RPV Sbjct: 48 VEMAKQEGLDLIEISPKANPPVCKITDIGKYRYDLQKKANKAKKKQKIVNLKEIKLRPVT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD KLK FL G KVK +V+F+GRE+ H LG+EL+ I + +I+ +P Sbjct: 108 DIHDYNFKLKNAQKFLEKGDKVKFTVRFKGREMQHTHLGKELMKRIINDTANLGKIEVDP 167 Query: 121 KFEGRQMIMILSS 133 K EGRQ+IMI+ Sbjct: 168 KLEGRQIIMIIQP 180 >gi|227817359|ref|YP_002817368.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC 684] gi|228917214|ref|ZP_04080771.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929622|ref|ZP_04092640.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935882|ref|ZP_04098692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948300|ref|ZP_04110583.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987822|ref|ZP_04147931.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228993302|ref|ZP_04153218.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM 12442] gi|228999355|ref|ZP_04158934.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17] gi|229006910|ref|ZP_04164540.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4] gi|229019799|ref|ZP_04176602.1| Translation initiation factor IF-3 [Bacillus cereus AH1273] gi|229032220|ref|ZP_04188193.1| Translation initiation factor IF-3 [Bacillus cereus AH1271] gi|229076077|ref|ZP_04209045.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18] gi|229087131|ref|ZP_04219281.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44] gi|229093672|ref|ZP_04224772.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42] gi|229099036|ref|ZP_04229970.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29] gi|229105202|ref|ZP_04235851.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28] gi|229118066|ref|ZP_04247425.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3] gi|229124141|ref|ZP_04253333.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201] gi|229141300|ref|ZP_04269838.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26] gi|229158178|ref|ZP_04286245.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342] gi|229163566|ref|ZP_04291516.1| Translation initiation factor IF-3 [Bacillus cereus R309803] gi|229186831|ref|ZP_04313986.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1] gi|229198723|ref|ZP_04325421.1| Translation initiation factor IF-3 [Bacillus cereus m1293] gi|38372270|sp|Q81L15|IF3_BACAN RecName: Full=Translation initiation factor IF-3 gi|61213087|sp|Q633M1|IF3_BACCZ RecName: Full=Translation initiation factor IF-3 gi|61213121|sp|Q72ZG2|IF3_BACC1 RecName: Full=Translation initiation factor IF-3 gi|227003475|gb|ACP13218.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC 684] gi|228584745|gb|EEK42865.1| Translation initiation factor IF-3 [Bacillus cereus m1293] gi|228596568|gb|EEK54233.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1] gi|228619948|gb|EEK76824.1| Translation initiation factor IF-3 [Bacillus cereus R309803] gi|228625136|gb|EEK81896.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342] gi|228642081|gb|EEK98374.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26] gi|228659443|gb|EEL15091.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201] gi|228665289|gb|EEL20772.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3] gi|228678128|gb|EEL32356.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28] gi|228684264|gb|EEL38208.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29] gi|228689759|gb|EEL43566.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42] gi|228696199|gb|EEL49034.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44] gi|228706940|gb|EEL59145.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18] gi|228729000|gb|EEL80003.1| Translation initiation factor IF-3 [Bacillus cereus AH1271] gi|228741524|gb|EEL91721.1| Translation initiation factor IF-3 [Bacillus cereus AH1273] gi|228754310|gb|EEM03725.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4] gi|228760300|gb|EEM09267.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17] gi|228766370|gb|EEM15013.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM 12442] gi|228771870|gb|EEM20327.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228811287|gb|EEM57625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823650|gb|EEM69472.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830009|gb|EEM75628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842415|gb|EEM87506.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 167 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|332969048|gb|EGK08088.1| translation initiation factor IF3 [Kingella kingae ATCC 23330] Length = 155 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG KVKI+++FRGRE+ HQ+LG +LL IK E +++ P Sbjct: 80 DDGDYNIKMRKIREFLGDGDKVKITLRFRGREMAHQELGAQLLERIKAELAEEGQVEQFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KLEGRQMVMMVAPK 153 >gi|256379477|ref|YP_003103137.1| translation initiation factor IF-3 [Actinosynnema mirum DSM 43827] gi|255923780|gb|ACU39291.1| translation initiation factor IF-3 [Actinosynnema mirum DSM 43827] Length = 204 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ + P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 45 LRLAQESDLDLVEVAAQARPPVCKLMDYGKYKYESAQKARESRRNQQLTVIKEQKLRPKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + FL G KVK+++ FRGRE +LG LL + E E+ ++ P Sbjct: 105 DPHDYQTKKGHVARFLGQGNKVKVTIMFRGREQSRPELGYRLLQRLAEDVAELGFVESNP 164 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 165 KQDGRNMIMVLAP 177 >gi|167562967|ref|ZP_02355883.1| translation initiation factor IF-3 [Burkholderia oklahomensis EO147] gi|167570155|ref|ZP_02363029.1| translation initiation factor IF-3 [Burkholderia oklahomensis C6786] Length = 156 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|289163682|ref|YP_003453820.1| Translation initiation factor IF-3 [Legionella longbeachae NSW150] gi|288856855|emb|CBJ10666.1| Translation initiation factor IF-3 [Legionella longbeachae NSW150] Length = 130 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 83/126 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L I++ E + ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERIQQDTAEFAIVEQHAKREGRQLL 120 Query: 129 MILSSK 134 M+LS K Sbjct: 121 MVLSPK 126 >gi|281417896|ref|ZP_06248916.1| translation initiation factor IF-3 [Clostridium thermocellum JW20] gi|281409298|gb|EFB39556.1| translation initiation factor IF-3 [Clostridium thermocellum JW20] gi|316940066|gb|ADU74100.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 1313] Length = 173 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VC+I+D K + + K EARK QK +KEV++ I+ Sbjct: 40 KIANAKNLDLVKIAPQAVPPVCRIMDYGKYMFELAKKEKEARKNQKVINVKEVRLSASIE 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL+DG KVK+SVKFRGRE+ + LG+++L E +++ ++ +PK Sbjct: 100 EHDFNFKLKNALRFLKDGDKVKVSVKFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPK 159 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 160 LEGRNMFMILNPK 172 >gi|165871448|ref|ZP_02216095.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488] gi|196042362|ref|ZP_03109632.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99] gi|196047724|ref|ZP_03114926.1| translation initiation factor IF-3 [Bacillus cereus 03BB108] gi|217962054|ref|YP_002340624.1| translation initiation factor IF-3 [Bacillus cereus AH187] gi|218905802|ref|YP_002453636.1| translation initiation factor IF-3 [Bacillus cereus AH820] gi|254686932|ref|ZP_05150790.1| translation initiation factor IF-3 [Bacillus anthracis str. CNEVA-9066] gi|254724496|ref|ZP_05186279.1| translation initiation factor IF-3 [Bacillus anthracis str. A1055] gi|254754682|ref|ZP_05206717.1| translation initiation factor IF-3 [Bacillus anthracis str. Vollum] gi|254757514|ref|ZP_05209541.1| translation initiation factor IF-3 [Bacillus anthracis str. Australia 94] gi|164712745|gb|EDR18275.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488] gi|196021445|gb|EDX60150.1| translation initiation factor IF-3 [Bacillus cereus 03BB108] gi|196026806|gb|EDX65443.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99] gi|217065168|gb|ACJ79418.1| translation initiation factor IF-3 [Bacillus cereus AH187] gi|218536199|gb|ACK88597.1| translation initiation factor IF-3 [Bacillus cereus AH820] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|318061737|ref|ZP_07980458.1| translation initiation factor IF-3 [Streptomyces sp. SA3_actG] gi|318080746|ref|ZP_07988078.1| translation initiation factor IF-3 [Streptomyces sp. SA3_actF] Length = 191 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 10 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 70 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 129 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 130 KQDGRNMIMVLGP 142 >gi|198284331|ref|YP_002220652.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248852|gb|ACH84445.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 166 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/126 (42%), Positives = 83/126 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI P VC+I+D K R+ K +A+++QK T +KE+K RP D D Q+K Sbjct: 39 LDLVEIAPQADPPVCRIMDYGKFRFQESKRQHDAKRRQKQTQVKEIKFRPRTDDADYQIK 98 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ I F+ DG + KI+++FRGRE+ H +LG ELL+ ++ E+ ++ P+ EGRQM+ Sbjct: 99 LRNILRFIEDGDRAKITLRFRGREMSHPELGMELLNRVERDLTEVGVVEQRPRMEGRQMV 158 Query: 129 MILSSK 134 MI++ + Sbjct: 159 MIVAPR 164 >gi|227510529|ref|ZP_03940578.1| protein translation initiation factor 3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513538|ref|ZP_03943587.1| protein translation initiation factor 3 [Lactobacillus buchneri ATCC 11577] gi|227083411|gb|EEI18723.1| protein translation initiation factor 3 [Lactobacillus buchneri ATCC 11577] gi|227190181|gb|EEI70248.1| protein translation initiation factor 3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 169 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 31 LKLAEDAELDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++S++F+GR I H+++GR +L + + +++ + P Sbjct: 91 DVNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKEIGRNVLERMAKETDDVATVTQRP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 151 KMDGRSMFLMLSPK 164 >gi|119716685|ref|YP_923650.1| translation initiation factor 3 [Nocardioides sp. JS614] gi|119537346|gb|ABL81963.1| bacterial translation initiation factor 3 (bIF-3) [Nocardioides sp. JS614] Length = 243 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVEI P VCK++D K +Y + A EAR+ Q + IKE+K+RP I Sbjct: 51 LKLAQEADLDLVEIAPQGKPPVCKLMDYGKFKYENAQKAREARRNQTNVIIKEMKLRPKI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 111 DAHDYETKKGHVVRFLRAGDKVKITIMFRGREQHRPELGFRLLQRLAEDVTELGFVESAP 170 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 171 KQDGRNMIMVLGP 183 >gi|256788790|ref|ZP_05527221.1| translation initiation factor IF-3 [Streptomyces lividans TK24] Length = 202 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|291009827|ref|ZP_06567800.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] Length = 168 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 23 LRLAQEADLDLVEVAPQARPPVCKLMDYGKFKYESAQKARESRRNQQQTVIKEQKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ I+ P Sbjct: 83 DPHDYETKKGHVSRFLGQGHKVKVTIMFRGREQSRPELGFRLLQRLADDVSELGFIEANP 142 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 143 KQDGRNMIMVLAP 155 >gi|119952988|ref|YP_945197.1| translation initiation factor IF-3 [Borrelia turicatae 91E135] gi|254803481|sp|A1QYY5|IF3_BORT9 RecName: Full=Translation initiation factor IF-3 gi|119861759|gb|AAX17527.1| bacterial protein translation initiation factor 3 (IF-3) [Borrelia turicatae 91E135] Length = 186 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVEI + P VCKI+D K ++ +K E ++ QK +KEV+M+P ID H Sbjct: 52 ARDAELDLVEISPNSVPPVCKIIDYGKYKFHQEKRQKEQKRNQKIIKLKEVRMQPKIDTH 111 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 DL K + I GFL++G KVK++++FRGRE+ H LG +L +I ER GE + + P K Sbjct: 112 DLDFKYRNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILESILERVGESNYVLESPAKM 171 Query: 123 EGRQMIMILSSKC 135 EG+ M +I++ K Sbjct: 172 EGKTMFLIIAPKS 184 >gi|134101784|ref|YP_001107445.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] gi|133914407|emb|CAM04520.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] Length = 163 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 18 LRLAQEADLDLVEVAPQARPPVCKLMDYGKFKYESAQKARESRRNQQQTVIKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ I+ P Sbjct: 78 DPHDYETKKGHVSRFLGQGHKVKVTIMFRGREQSRPELGFRLLQRLADDVSELGFIEANP 137 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 138 KQDGRNMIMVLAP 150 >gi|111224589|ref|YP_715383.1| protein chain initiation factor 3 [Frankia alni ACN14a] gi|111152121|emb|CAJ63849.1| Protein chain initiation factor 3, IF3, InfC [Frankia alni ACN14a] Length = 147 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP ID Sbjct: 1 MAQEADLDLVEVAPTARPPVCKLMDFGKFKYESDQKRREARKNQVQTVIKEMKLRPKIDP 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K + FLR G KVKI++ FRGRE +LG LL + E+ ++ +PK Sbjct: 61 HDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSADVAELGYVEAQPKQ 120 Query: 123 EGRQMIMILSS 133 +GR M M+++ Sbjct: 121 DGRNMTMVMAP 131 >gi|328479650|gb|EGF48828.1| translation initiation factor IF-3 [Lactobacillus rhamnosus MTCC 5462] Length = 162 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 85/132 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 31 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 91 GEAGFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 150 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 151 KMDGRSMFLMLA 162 >gi|325266387|ref|ZP_08133065.1| translation initiation factor IF3 [Kingella denitrificans ATCC 33394] gi|324982180|gb|EGC17814.1| translation initiation factor IF3 [Kingella denitrificans ATCC 33394] Length = 155 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 LSMAEEKDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL DG KVKI+++FRGRE+ HQ+ G +LL +K E++ ++ P Sbjct: 80 DEGDYNIKMRNVKRFLEDGDKVKITLRFRGREMAHQEFGAQLLERVKADLEELAAVESFP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMVAPK 153 >gi|302518074|ref|ZP_07270416.1| translation initiation factor IF-3 [Streptomyces sp. SPB78] gi|333028250|ref|ZP_08456314.1| putative translation initiation factor IF-3 [Streptomyces sp. Tu6071] gi|302426969|gb|EFK98784.1| translation initiation factor IF-3 [Streptomyces sp. SPB78] gi|332748102|gb|EGJ78543.1| putative translation initiation factor IF-3 [Streptomyces sp. Tu6071] Length = 229 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 48 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 108 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 167 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 168 KQDGRNMIMVLGP 180 >gi|295839837|ref|ZP_06826770.1| translation initiation factor IF-3 [Streptomyces sp. SPB74] gi|197698676|gb|EDY45609.1| translation initiation factor IF-3 [Streptomyces sp. SPB74] Length = 245 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 183 Query: 121 KFEGRQMIMILS 132 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLG 195 >gi|325528726|gb|EGD05796.1| translation initiation factor IF-3 [Burkholderia sp. TJI49] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 85/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI +P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLEEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|291287862|ref|YP_003504678.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM 12809] gi|290885022|gb|ADD68722.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM 12809] Length = 184 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 89/133 (66%), Gaps = 2/133 (1%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRPVI 60 +A +A LDLVEI + P VC+++D K ++ K EARKKQ++ + KEVK RP I Sbjct: 46 LADQAGLDLVEIAPTAKPPVCRVMDYSKFKFEKNKKDREARKKQRANQVDTKEVKFRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK+K + FL G KVK+ +++RGRE+M Q++G +LL+ IK+ + +D +P Sbjct: 106 EEHDYEVKMKNVKKFLSAGDKVKVVLRYRGREMMFQEMGLQLLNRIKDDIEGLGTVDKKP 165 Query: 121 KFEGRQMIMILSS 133 + +GRQ IM++S Sbjct: 166 EMQGRQQIMMVSP 178 >gi|21220097|ref|NP_625876.1| translation initiation factor IF-3 [Streptomyces coelicolor A3(2)] gi|7387791|sp|O88060|IF3_STRCO RecName: Full=Translation initiation factor IF-3 gi|3581855|emb|CAA20811.1| putative translation initiation factor IF-3 [Streptomyces coelicolor A3(2)] Length = 217 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 95 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|115351413|ref|YP_773252.1| translation initiation factor IF-3 [Burkholderia ambifaria AMMD] gi|170701131|ref|ZP_02892105.1| translation initiation factor IF-3 [Burkholderia ambifaria IOP40-10] gi|171318443|ref|ZP_02907598.1| translation initiation factor IF-3 [Burkholderia ambifaria MEX-5] gi|172060452|ref|YP_001808104.1| translation initiation factor IF-3 [Burkholderia ambifaria MC40-6] gi|115281401|gb|ABI86918.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia ambifaria AMMD] gi|170133953|gb|EDT02307.1| translation initiation factor IF-3 [Burkholderia ambifaria IOP40-10] gi|171096357|gb|EDT41259.1| translation initiation factor IF-3 [Burkholderia ambifaria MEX-5] gi|171992969|gb|ACB63888.1| translation initiation factor IF-3 [Burkholderia ambifaria MC40-6] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|78066087|ref|YP_368856.1| translation initiation factor 3 [Burkholderia sp. 383] gi|107022549|ref|YP_620876.1| translation initiation factor IF-3 [Burkholderia cenocepacia AU 1054] gi|116689498|ref|YP_835121.1| translation initiation factor IF-3 [Burkholderia cenocepacia HI2424] gi|170732803|ref|YP_001764750.1| translation initiation factor IF-3 [Burkholderia cenocepacia MC0-3] gi|254245608|ref|ZP_04938929.1| translation initiation factor IF-3 [Burkholderia cenocepacia PC184] gi|254252557|ref|ZP_04945875.1| translation initiation factor IF-3 [Burkholderia dolosa AUO158] gi|77966832|gb|ABB08212.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia sp. 383] gi|105892738|gb|ABF75903.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia cenocepacia AU 1054] gi|116647587|gb|ABK08228.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia cenocepacia HI2424] gi|124870384|gb|EAY62100.1| translation initiation factor IF-3 [Burkholderia cenocepacia PC184] gi|124895166|gb|EAY69046.1| translation initiation factor IF-3 [Burkholderia dolosa AUO158] gi|169816045|gb|ACA90628.1| translation initiation factor IF-3 [Burkholderia cenocepacia MC0-3] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|125973740|ref|YP_001037650.1| translation initiation factor 3 [Clostridium thermocellum ATCC 27405] gi|256005542|ref|ZP_05430503.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 2360] gi|125713965|gb|ABN52457.1| bacterial translation initiation factor 3 (bIF-3) [Clostridium thermocellum ATCC 27405] gi|255990522|gb|EEU00643.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 2360] Length = 164 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VC+I+D K + + K EARK QK +KEV++ I+ Sbjct: 31 KIANAKNLDLVKIAPQAVPPVCRIMDYGKYMFELAKKEKEARKNQKVINVKEVRLSASIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL+DG KVK+SVKFRGRE+ + LG+++L E +++ ++ +PK Sbjct: 91 EHDFNFKLKNALRFLKDGDKVKVSVKFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPK 150 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 151 LEGRNMFMILNPK 163 >gi|262091755|gb|ACY25344.1| bacterial translation initiation factor 3 [uncultured actinobacterium] Length = 177 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLVE+ S P VC+I+D K RY + E+RKK +KEVK +P I Sbjct: 7 LERARVAELDLVEVASQADPPVCRIMDYGKFRYEESQKLKESRKKTVQITMKEVKFKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K++ + FLR+G KVK++++FRGRE+ H +LG ++L + E+ G ++++D Sbjct: 67 GKADFDTKVRHMQEFLREGHKVKVTLQFRGREVAHPELGTKILHAVIEQLGSVAKVDTHA 126 Query: 121 KFEGRQMIMILSSK 134 + EGR M M+LS + Sbjct: 127 RLEGRNMTMVLSPE 140 >gi|312795973|ref|YP_004028895.1| protein translation Initiation Factor 3 (IF-3) [Burkholderia rhizoxinica HKI 454] gi|312167748|emb|CBW74751.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Burkholderia rhizoxinica HKI 454] Length = 156 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP Sbjct: 20 FRLAEQHDVDLVEIAPHAQPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L +++ E +++ P Sbjct: 80 DDGDYHVKLRNLTRFLDEGDKTKITLRFRGREMAHQEIGMRMLDRLRQDLDEYGQVEQMP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 140 KMEGRQMVMVLAPK 153 >gi|258592605|emb|CBE68914.1| Translation initiation factor IF-3 [NC10 bacterium 'Dutch sediment'] Length = 163 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDLVE+ P VC+I++ K RY K EARKKQ IKE+K+RP Sbjct: 29 LETAQKLALDLVEVAPDAKPPVCRIMNYGKYRYEQNKKTREARKKQTVIQIKEIKLRPKT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + + FL++G K K+++ FRGRE++H + G+ L E EI+ ++ P Sbjct: 89 DEHDFQFKSRHAERFLKEGNKTKVTLMFRGREMVHIERGKAQLDRFAEALKEIAVLEQYP 148 Query: 121 KFEGRQMIMILSSK 134 + EGR M+MIL+ K Sbjct: 149 RQEGRNMVMILTPK 162 >gi|53725297|ref|YP_102786.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 23344] gi|76809353|ref|YP_333291.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710b] gi|83718960|ref|YP_443110.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] gi|121599491|ref|YP_992865.1| translation initiation factor IF-3 [Burkholderia mallei SAVP1] gi|126441225|ref|YP_001058753.1| translation initiation factor IF-3 [Burkholderia pseudomallei 668] gi|126452447|ref|YP_001066006.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106a] gi|217423685|ref|ZP_03455186.1| translation initiation factor IF-3 [Burkholderia pseudomallei 576] gi|237812017|ref|YP_002896468.1| translation initiation factor IF-3 [Burkholderia pseudomallei MSHR346] gi|238562604|ref|ZP_00440147.2| translation initiation factor IF-3 [Burkholderia mallei GB8 horse 4] gi|242316659|ref|ZP_04815675.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106b] gi|251767933|ref|ZP_02268879.2| translation initiation factor IF-3 [Burkholderia mallei PRL-20] gi|254178720|ref|ZP_04885375.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 10399] gi|254180003|ref|ZP_04886602.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1655] gi|254188583|ref|ZP_04895094.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pasteur 52237] gi|254198031|ref|ZP_04904453.1| translation initiation factor IF-3 [Burkholderia pseudomallei S13] gi|254199738|ref|ZP_04906104.1| translation initiation factor IF-3 [Burkholderia mallei FMH] gi|254206060|ref|ZP_04912412.1| translation initiation factor IF-3 [Burkholderia mallei JHU] gi|254259737|ref|ZP_04950791.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710a] gi|52428720|gb|AAU49313.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 23344] gi|76578806|gb|ABA48281.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710b] gi|83652785|gb|ABC36848.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] gi|121228301|gb|ABM50819.1| translation initiation factor IF-3 [Burkholderia mallei SAVP1] gi|126220718|gb|ABN84224.1| translation initiation factor IF-3 [Burkholderia pseudomallei 668] gi|126226089|gb|ABN89629.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106a] gi|147749334|gb|EDK56408.1| translation initiation factor IF-3 [Burkholderia mallei FMH] gi|147753503|gb|EDK60568.1| translation initiation factor IF-3 [Burkholderia mallei JHU] gi|157936262|gb|EDO91932.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pasteur 52237] gi|160699759|gb|EDP89729.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 10399] gi|169654772|gb|EDS87465.1| translation initiation factor IF-3 [Burkholderia pseudomallei S13] gi|184210543|gb|EDU07586.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1655] gi|217393543|gb|EEC33564.1| translation initiation factor IF-3 [Burkholderia pseudomallei 576] gi|237504465|gb|ACQ96783.1| translation initiation factor IF-3 [Burkholderia pseudomallei MSHR346] gi|238522289|gb|EEP85734.1| translation initiation factor IF-3 [Burkholderia mallei GB8 horse 4] gi|242139898|gb|EES26300.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106b] gi|243061340|gb|EES43526.1| translation initiation factor IF-3 [Burkholderia mallei PRL-20] gi|254218426|gb|EET07810.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710a] Length = 156 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|289772685|ref|ZP_06532063.1| translation initiation factor IF-3 [Streptomyces lividans TK24] gi|289702884|gb|EFD70313.1| translation initiation factor IF-3 [Streptomyces lividans TK24] Length = 246 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLGP 196 >gi|324998029|ref|ZP_08119141.1| translation initiation factor IF-3 [Pseudonocardia sp. P1] Length = 178 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 23 LRLAQDADLDLVEVAGQARPPVCKLMDYGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E G+I+ ++ P Sbjct: 83 DKHDYETKRGHVRRFLEGGNKVKVTIMFRGREQSRPELGYRLLQRLAEDIGDIAVVEAAP 142 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 143 KQDGRNMTMVLAP 155 >gi|124385465|ref|YP_001026204.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10229] gi|126448600|ref|YP_001080525.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10247] gi|254358431|ref|ZP_04974704.1| translation initiation factor IF-3 [Burkholderia mallei 2002721280] gi|124293485|gb|ABN02754.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10229] gi|126241470|gb|ABO04563.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10247] gi|148027558|gb|EDK85579.1| translation initiation factor IF-3 [Burkholderia mallei 2002721280] Length = 156 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|30022650|ref|NP_834281.1| translation initiation factor IF-3 [Bacillus cereus ATCC 14579] gi|228910398|ref|ZP_04074213.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200] gi|228923318|ref|ZP_04086606.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228941753|ref|ZP_04104300.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954843|ref|ZP_04116863.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960843|ref|ZP_04122478.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228967671|ref|ZP_04128692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228974677|ref|ZP_04135243.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981271|ref|ZP_04141571.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407] gi|229048282|ref|ZP_04193850.1| Translation initiation factor IF-3 [Bacillus cereus AH676] gi|229072076|ref|ZP_04205285.1| Translation initiation factor IF-3 [Bacillus cereus F65185] gi|229081827|ref|ZP_04214319.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2] gi|229112039|ref|ZP_04241582.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15] gi|229129858|ref|ZP_04258824.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4] gi|229147133|ref|ZP_04275492.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24] gi|229152769|ref|ZP_04280952.1| Translation initiation factor IF-3 [Bacillus cereus m1550] gi|229180893|ref|ZP_04308228.1| Translation initiation factor IF-3 [Bacillus cereus 172560W] gi|229192775|ref|ZP_04319733.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876] gi|38372267|sp|Q812P6|IF3_BACCR RecName: Full=Translation initiation factor IF-3 gi|29898208|gb|AAP11482.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bacillus cereus ATCC 14579] gi|228590614|gb|EEK48475.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876] gi|228602450|gb|EEK59936.1| Translation initiation factor IF-3 [Bacillus cereus 172560W] gi|228630589|gb|EEK87235.1| Translation initiation factor IF-3 [Bacillus cereus m1550] gi|228636382|gb|EEK92853.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24] gi|228653549|gb|EEL09421.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4] gi|228671362|gb|EEL26663.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15] gi|228701415|gb|EEL53909.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2] gi|228711010|gb|EEL62976.1| Translation initiation factor IF-3 [Bacillus cereus F65185] gi|228723007|gb|EEL74384.1| Translation initiation factor IF-3 [Bacillus cereus AH676] gi|228778471|gb|EEM26738.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407] gi|228785080|gb|EEM33093.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792047|gb|EEM39628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228798865|gb|EEM45844.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804832|gb|EEM51431.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228817965|gb|EEM64043.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228836272|gb|EEM81625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849164|gb|EEM94003.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200] Length = 167 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTVESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|134295548|ref|YP_001119283.1| translation initiation factor 3 [Burkholderia vietnamiensis G4] gi|134138705|gb|ABO54448.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia vietnamiensis G4] Length = 156 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLLRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 143 GRQMIMVLSPK 153 >gi|53719557|ref|YP_108543.1| translation initiation factor IF-3 [Burkholderia pseudomallei K96243] gi|52209971|emb|CAH35943.1| translation initiation factor IF-3 [Burkholderia pseudomallei K96243] Length = 178 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 45 SEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDG 104 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 105 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKME 164 Query: 124 GRQMIMILSSK 134 GRQMIM+LS K Sbjct: 165 GRQMIMVLSPK 175 >gi|152976958|ref|YP_001376475.1| translation initiation factor IF-3 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025710|gb|ABS23480.1| translation initiation factor IF-3 [Bacillus cytotoxicus NVH 391-98] Length = 195 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 59 LDMAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+ I+ +P Sbjct: 119 DEHDFNTKLRNALKFLGKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACAEVGTIESKP 178 Query: 121 KFEGRQMIMILSSK 134 K EGR M +IL+ K Sbjct: 179 KMEGRSMFLILAPK 192 >gi|303242607|ref|ZP_07329083.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] gi|302589864|gb|EFL59636.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] Length = 173 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +LDLV+I P VC+I+D K + + K EARK QK IKEV++ I+ Sbjct: 41 LANSKSLDLVKIAPQAAPPVCRIMDYGKYIFELNKKEKEARKNQKVVSIKEVRLSASIEE 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K+K FL+DG KVK+SVKFRGRE+ + LG ++L E E+ ++ +PK Sbjct: 101 HDFEFKVKNAVKFLKDGDKVKVSVKFRGREMNYTALGEQVLQKFAESVQEVGTVEKKPKL 160 Query: 123 EGRQMIMILSSK 134 EGR M+MIL+ K Sbjct: 161 EGRNMLMILNPK 172 >gi|206969668|ref|ZP_03230622.1| translation initiation factor IF-3 [Bacillus cereus AH1134] gi|218235389|ref|YP_002369370.1| translation initiation factor IF-3 [Bacillus cereus B4264] gi|218899728|ref|YP_002448139.1| translation initiation factor IF-3 [Bacillus cereus G9842] gi|228903092|ref|ZP_04067228.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 4222] gi|296505047|ref|YP_003666747.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171] gi|206735356|gb|EDZ52524.1| translation initiation factor IF-3 [Bacillus cereus AH1134] gi|218163346|gb|ACK63338.1| translation initiation factor IF-3 [Bacillus cereus B4264] gi|218545941|gb|ACK98335.1| translation initiation factor IF-3 [Bacillus cereus G9842] gi|228856501|gb|EEN01025.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 4222] gi|296326099|gb|ADH09027.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171] gi|326942358|gb|AEA18254.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar chinensis CT-43] Length = 166 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTVESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|302533486|ref|ZP_07285828.1| translation initiation factor IF-3 [Streptomyces sp. C] gi|302442381|gb|EFL14197.1| translation initiation factor IF-3 [Streptomyces sp. C] Length = 234 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEELGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|255320852|ref|ZP_05362026.1| translation initiation factor IF-3 [Acinetobacter radioresistens SK82] gi|262380255|ref|ZP_06073410.1| translation initiation factor IF-3 [Acinetobacter radioresistens SH164] gi|255302021|gb|EET81264.1| translation initiation factor IF-3 [Acinetobacter radioresistens SK82] gi|262298449|gb|EEY86363.1| translation initiation factor IF-3 [Acinetobacter radioresistens SH164] Length = 137 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E++LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 1 MRAAEESDLDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ EI ++ P Sbjct: 61 DVGDYQVKLRAIIKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAEIGVVEQAP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+L K Sbjct: 121 KMEGRQMGMLLGPK 134 >gi|288574760|ref|ZP_06393117.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570501|gb|EFC92058.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 161 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/125 (45%), Positives = 81/125 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVE+ P VC+ILD K RY QK +ARKKQK+ +KE+KMRP ID HD K Sbjct: 18 LDLVEVAPGAKPPVCRILDYGKFRYQQQKREKDARKKQKTQTLKEMKMRPKIDEHDYNFK 77 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 KAI FL +G +VK+S+ FRGRE+ D G+E+L + + ++ +++ P+ EGR M Sbjct: 78 TKAIRSFLENGHRVKVSIFFRGREMAFLDRGKEVLDRVAKDCEDLGKMEGFPRMEGRYMR 137 Query: 129 MILSS 133 M+++ Sbjct: 138 MMITP 142 >gi|229013778|ref|ZP_04170906.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048] gi|229062259|ref|ZP_04199580.1| Translation initiation factor IF-3 [Bacillus cereus AH603] gi|229135410|ref|ZP_04264198.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196] gi|229169302|ref|ZP_04297012.1| Translation initiation factor IF-3 [Bacillus cereus AH621] gi|228614065|gb|EEK71180.1| Translation initiation factor IF-3 [Bacillus cereus AH621] gi|228648053|gb|EEL04100.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196] gi|228716987|gb|EEL68668.1| Translation initiation factor IF-3 [Bacillus cereus AH603] gi|228747447|gb|EEL97322.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048] Length = 167 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAAGLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 91 DEHDFNTKLRNAVKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|52081389|ref|YP_080180.1| translation initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|319647297|ref|ZP_08001519.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2] gi|52004600|gb|AAU24542.1| initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|317390644|gb|EFV71449.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2] Length = 186 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 50 LEIAGRANLDLVLVAANAKPPVCRIMDYGKYRFEQQKKEKEARKNQKIINLKEVRLSPGI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL+ G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 110 EEHDFNTKLRNAIKFLQKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 169 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 170 KMDGRSMFLVLAPKT 184 >gi|226944148|ref|YP_002799221.1| translation initiation factor IF-3 [Azotobacter vinelandii DJ] gi|226719075|gb|ACO78246.1| translation initiation factor IF-3 [Azotobacter vinelandii DJ] Length = 177 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A+K QK IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQVAAAKKNQKQVQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLNDGDKAKVSLRFRGREMAHQELGMELLKRVENDLAEFGTVEQYP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|29427520|sp|Q8RQ01|IF3_AZOVI RecName: Full=Translation initiation factor IF-3 gi|19386909|gb|AAL87031.1|AF332624_2 initiation factor 3 [Azotobacter vinelandii] Length = 181 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A+K QK IKE+K RP Sbjct: 45 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQVAAAKKNQKQVQIKEIKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 105 EEGDYQVKLRNLVRFLNDGDKAKVSLRFRGREMAHQELGMELLKRVENDLAEFGTVEQYP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 165 KLEGRQLMMVIAPK 178 >gi|297562012|ref|YP_003680986.1| translation initiation factor IF-3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846460|gb|ADH68480.1| translation initiation factor IF-3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 182 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ + P V K++D K +Y A E+RK Q +T IKE+K+RP I Sbjct: 23 LRLAQESDLDLVEVAPTARPPVAKLMDYGKFKYESAVKARESRKNQSNTIIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LGR LL+ + E ++ ++ +P Sbjct: 83 DPHDYETKKGHVVRFLKSGDKVKVTIMFRGREQSRPELGRRLLARLAEDVQDLGTVESQP 142 Query: 121 KFEGRQMIMILS 132 K +GR M+M++ Sbjct: 143 KQDGRNMVMVIG 154 >gi|163942309|ref|YP_001647193.1| translation initiation factor IF-3 [Bacillus weihenstephanensis KBAB4] gi|163864506|gb|ABY45565.1| translation initiation factor IF-3 [Bacillus weihenstephanensis KBAB4] Length = 166 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAAGLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 90 DEHDFNTKLRNAVKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|329939051|ref|ZP_08288425.1| translation initiation factor IF-3 [Streptomyces griseoaurantiacus M045] gi|329301936|gb|EGG45829.1| translation initiation factor IF-3 [Streptomyces griseoaurantiacus M045] Length = 209 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILS 132 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLG 151 >gi|330816670|ref|YP_004360375.1| Translation initiation factor IF-3 [Burkholderia gladioli BSR3] gi|327369063|gb|AEA60419.1| Translation initiation factor IF-3 [Burkholderia gladioli BSR3] Length = 156 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E +++ PK E Sbjct: 83 DYNVKLRNLTRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEFGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ K Sbjct: 143 GRQMIMVLAPK 153 >gi|297181833|gb|ADI18012.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0200_19J16] Length = 144 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A+LDLVE+ P VC+++D K +Y K + AR+ QK +KEVKM+P I Sbjct: 7 LEMAENADLDLVEVSPKANPPVCRLMDYGKFKYQQSKRSHVARQNQKIVHLKEVKMKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ I+ Sbjct: 67 EEHDFQFKLRNALRFLEDGDKVKVGVRFMGRQIAHKDLGIELLEKFQAEIGDGGTIEQPI 126 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 127 TSEGRSMHMILAP 139 >gi|302561588|ref|ZP_07313930.1| translation initiation factor IF-3 [Streptomyces griseoflavus Tu4000] gi|302479206|gb|EFL42299.1| translation initiation factor IF-3 [Streptomyces griseoflavus Tu4000] Length = 198 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|254877295|ref|ZP_05250005.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843316|gb|EET21730.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 179 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EAN+DLVE+ ++ P VC+++D K + K +A+K QK T IKE+K+RPV Sbjct: 44 LALAEEANVDLVEMVANANPPVCRLMDYGKFLFEQGKKKAQAKKNQKQTQIKEIKLRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H +LG ++L + E ++ +P Sbjct: 104 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHNELGMQMLQRMASDAAEYGVVEHQP 163 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 164 KMEGRQMIMVLGPK 177 >gi|89074411|ref|ZP_01160893.1| translation initiation factor IF-3 [Photobacterium sp. SKA34] gi|89049898|gb|EAR55439.1| translation initiation factor IF-3 [Photobacterium sp. SKA34] Length = 160 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA +DLVEI + P VC+++D K + K A E +K QK IKEVK RP Sbjct: 24 MEVALEAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ LG ELL+ IK +I+ + P Sbjct: 84 DEGDYQVKLRNLTRFLEEGNKGKVTLRFRGREMAHQGLGIELLNRIKGELEDIAVCESFP 143 Query: 121 -KFEGRQMIMILSSK 134 + EGRQM M+L+ K Sbjct: 144 NRVEGRQMTMMLAPK 158 >gi|108804140|ref|YP_644077.1| translation initiation factor 3 [Rubrobacter xylanophilus DSM 9941] gi|108765383|gb|ABG04265.1| bacterial translation initiation factor 3 (bIF-3) [Rubrobacter xylanophilus DSM 9941] Length = 175 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+ +LDLVE+ + P V +++D K +Y ++ ARKKQ + ++E+K+RP I Sbjct: 20 MDIAERQDLDLVEVAPNANPPVVRLMDYGKYKYQKEQARKAARKKQVNINVREIKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + K ++ FLR G KVK+++ FRGRE+ H +LG LL + + ++ RI+ +P Sbjct: 80 GDHDFETKKGHVERFLRGGDKVKVTIMFRGREVQHPELGERLLRRLADDLSDLGRIENQP 139 Query: 121 KFEGRQMIMILSSK 134 K +GR M+M+L+ + Sbjct: 140 KLDGRNMVMVLAPR 153 >gi|254369558|ref|ZP_04985569.1| hypothetical protein FTAG_01445 [Francisella tularensis subsp. holarctica FSC022] gi|157122512|gb|EDO66647.1| hypothetical protein FTAG_01445 [Francisella tularensis subsp. holarctica FSC022] Length = 178 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 43 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L ++ E ++ +P Sbjct: 103 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQHMANDAAEYGVVEHQP 162 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 163 KLEGRQMIMVLGPK 176 >gi|238027730|ref|YP_002911961.1| translation initiation factor IF-3 [Burkholderia glumae BGR1] gi|237876924|gb|ACR29257.1| Translation initiation factor IF-3 [Burkholderia glumae BGR1] Length = 156 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 84/131 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 23 SEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDG 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK E Sbjct: 83 DYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPKME 142 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ K Sbjct: 143 GRQMIMVLAPK 153 >gi|71066653|ref|YP_265380.1| translation initiation factor 3 [Psychrobacter arcticus 273-4] gi|93007242|ref|YP_581679.1| translation initiation factor IF-3 [Psychrobacter cryohalolentis K5] gi|71039638|gb|AAZ19946.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter arcticus 273-4] gi|92394920|gb|ABE76195.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter cryohalolentis K5] Length = 167 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E +LDLVE+ P VCKI+D + Y ++ A EA+K QK T +KE+K+RP Sbjct: 31 MKAAREDSLDLVELVPEAKPPVCKIMDYKHFLYDQKQKAKEAKKNQKQTQLKEMKLRPST 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL D KVKIS++FRGRE+ HQ++GR+ L I E +IS ++ P Sbjct: 91 EEADYQVKLRKIVSFLEDQDKVKISIRFRGREMAHQEIGRKQLDRIIEDTADISNVEQYP 150 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 151 KMEGRQMGMLLGP 163 >gi|312195567|ref|YP_004015628.1| translation initiation factor IF-3 [Frankia sp. EuI1c] gi|311226903|gb|ADP79758.1| translation initiation factor IF-3 [Frankia sp. EuI1c] Length = 182 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 35 MRLAQEADLDLVEVAPTARPPVCKLMDFGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + E+ ++ +P Sbjct: 95 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVAELGYVEAQP 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 155 KQDGRNMTMVMAP 167 >gi|239978529|ref|ZP_04701053.1| translation initiation factor IF-3 [Streptomyces albus J1074] Length = 186 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 7 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ I+ P Sbjct: 67 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFIESNP 126 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 127 KQDGRNMIMVLGP 139 >gi|309792160|ref|ZP_07686632.1| translation initiation factor IF-3 [Oscillochloris trichoides DG6] gi|308225701|gb|EFO79457.1| translation initiation factor IF-3 [Oscillochloris trichoides DG6] Length = 217 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 83/133 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E LDLVE+ + P VC++LD K RY K EARK QK +K++++ P D Sbjct: 7 LAEERGLDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARKNQKQAELKQIRLMPKTDD 66 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HDL+VK FL G KVK +V+FRGRE+ H D+GR++L I E+ +IS ++ +P Sbjct: 67 HDLEVKANQARRFLLGGDKVKFNVRFRGREMAHPDIGRKMLEQIAEQLRDISVVEQKPLM 126 Query: 123 EGRQMIMILSSKC 135 EGR + ++L+ Sbjct: 127 EGRVLSLLLAPTA 139 >gi|52786765|ref|YP_092594.1| translation initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|52349267|gb|AAU41901.1| InfC [Bacillus licheniformis ATCC 14580] Length = 211 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 75 LEIAGRANLDLVLVAANAKPPVCRIMDYGKYRFEQQKKEKEARKNQKIINLKEVRLSPGI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL+ G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 135 EEHDFNTKLRNAIKFLQKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 194 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 195 KMDGRSMFLVLAPK 208 >gi|167626331|ref|YP_001676831.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668764|ref|ZP_04756342.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596332|gb|ABZ86330.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 155 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EAN+DLVE+ ++ P VC+++D K + K +A+K QK T IKE+K+RPV Sbjct: 20 LALAEEANVDLVEMVANANPPVCRLMDYGKFLFEQGKKKAQAKKNQKQTQIKEIKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H +LG ++L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHNELGMQMLQRMASDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 140 KMEGRQMIMVLGPK 153 >gi|317153729|ref|YP_004121777.1| translation initiation factor IF-3 [Desulfovibrio aespoeensis Aspo-2] gi|316943980|gb|ADU63031.1| translation initiation factor IF-3 [Desulfovibrio aespoeensis Aspo-2] Length = 155 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 81/130 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ + P VCKI+D K +Y QK EA+KKQ IKEVK RP D H Sbjct: 23 AKEKGLDLVEVAPNADPPVCKIMDYGKFKYQQQKKLQEAKKKQTVIKIKEVKFRPKTDEH 82 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q KL I FL DG + K++V FRGREI+H+D G ++L + ++++++ P E Sbjct: 83 DYQTKLNKILQFLDDGDRCKVTVFFRGREIVHKDRGLKMLERVVTDTVDVAKVESRPMSE 142 Query: 124 GRQMIMILSS 133 GR M M+L+ Sbjct: 143 GRTMTMMLAP 152 >gi|239932314|ref|ZP_04689267.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] gi|291440678|ref|ZP_06580068.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] gi|291343573|gb|EFE70529.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] Length = 199 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|294628445|ref|ZP_06707005.1| translation initiation factor IF-3 [Streptomyces sp. e14] gi|292831778|gb|EFF90127.1| translation initiation factor IF-3 [Streptomyces sp. e14] Length = 224 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|302550252|ref|ZP_07302594.1| translation initiation factor IF-3 [Streptomyces viridochromogenes DSM 40736] gi|302467870|gb|EFL30963.1| translation initiation factor IF-3 [Streptomyces viridochromogenes DSM 40736] Length = 216 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 95 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|118595088|ref|ZP_01552435.1| Initiation factor 3 [Methylophilales bacterium HTCC2181] gi|118440866|gb|EAV47493.1| Initiation factor 3 [Methylophilales bacterium HTCC2181] Length = 178 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/128 (44%), Positives = 80/128 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ DLVEI P VC+++D K +Y+ K EA+ KQK+ +KEVK RP D + Sbjct: 18 AEDLETDLVEIAPKAKPPVCRLMDYGKFKYSQSKKLHEAKTKQKNVQVKEVKFRPGTDDN 77 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL DG K K++++FRGREI HQ LG LL ++ E ++ PK E Sbjct: 78 DYNVKLRNLIRFLGDGDKTKVTLRFRGREIAHQQLGMALLKRVEADLEEYGVVEQFPKME 137 Query: 124 GRQMIMIL 131 GRQM+M+L Sbjct: 138 GRQMVMVL 145 >gi|289643249|ref|ZP_06475375.1| translation initiation factor IF-3 [Frankia symbiont of Datisca glomerata] gi|289506954|gb|EFD27927.1| translation initiation factor IF-3 [Frankia symbiont of Datisca glomerata] Length = 214 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 66 MRLAQEADLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 125 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 126 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 185 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 186 KQDGRNMTMVMAP 198 >gi|116618538|ref|YP_818909.1| translation initiation factor 3 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097385|gb|ABJ62536.1| bacterial translation initiation factor 3 (bIF-3) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 143 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A +A++DLV + ++ V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QLANDADMDLVLVQANAEVPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GRE+L + E +I++++ K Sbjct: 68 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGREVLDRMAEELNDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 128 MDGRQMFLVLAPR 140 >gi|124213|sp|P03000|IF3_BACST RecName: Full=Translation initiation factor IF-3 gi|580890|emb|CAA34312.1| unnamed protein product [Geobacillus stearothermophilus] Length = 172 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 35 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L + E +I+ ++ P Sbjct: 95 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAP 154 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 155 KMDGRNMFLVLAPK 168 >gi|261418267|ref|YP_003251949.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61] gi|297529121|ref|YP_003670396.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3] gi|319767773|ref|YP_004133274.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52] gi|261374724|gb|ACX77467.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61] gi|297252373|gb|ADI25819.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3] gi|317112639|gb|ADU95131.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52] Length = 202 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 65 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 125 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAP 184 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 185 KMDGRNMFLVLAPK 198 >gi|223765|prf||0910186A initiation factor IF3 Length = 171 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 34 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L + E +I+ ++ P Sbjct: 94 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAP 153 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 154 KMDGRNMFLVLAPK 167 >gi|291450425|ref|ZP_06589815.1| translation initiation factor IF-3 [Streptomyces albus J1074] gi|291353374|gb|EFE80276.1| translation initiation factor IF-3 [Streptomyces albus J1074] Length = 222 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|227431923|ref|ZP_03913945.1| translation initiation factor IF3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352327|gb|EEJ42531.1| translation initiation factor IF3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 153 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A +A++DLV + ++ V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 18 QLANDADMDLVLVQANAEVPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 77 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GRE+L + E +I++++ K Sbjct: 78 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGREVLDRMAEELNDIAKVEQRAK 137 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 138 MDGRQMFLVLAPR 150 >gi|254385012|ref|ZP_05000346.1| translation initiation factor IF-3 [Streptomyces sp. Mg1] gi|194343891|gb|EDX24857.1| translation initiation factor IF-3 [Streptomyces sp. Mg1] Length = 243 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEDLGFIESNP 162 Query: 121 KFEGRQMIMILS 132 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLG 174 >gi|169656669|ref|YP_001428924.2| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|164551737|gb|ABU61968.2| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 173 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 38 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 98 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 157 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 158 KLEGRQMIMVLGPK 171 >gi|294141073|ref|YP_003557051.1| translation initiation factor IF-3 [Shewanella violacea DSS12] gi|293327542|dbj|BAJ02273.1| translation initiation factor IF-3 [Shewanella violacea DSS12] Length = 158 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 90/133 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KEVK RP D Sbjct: 24 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKIVQVKEVKFRPGTD 83 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ ++ FL DG K K++++FRGRE+ HQ+LG +LL+ IK+ EI+ ++ PK Sbjct: 84 ENDYQVKLRNLNRFLTDGDKAKVTLRFRGREMAHQNLGMKLLNRIKDDLAEIAVVESFPK 143 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 144 MEGRQAVMVLAPK 156 >gi|258654266|ref|YP_003203422.1| translation initiation factor IF-3 [Nakamurella multipartita DSM 44233] gi|258557491|gb|ACV80433.1| translation initiation factor IF-3 [Nakamurella multipartita DSM 44233] Length = 227 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA+LDLVE+ P VCK++D K +Y + A EAR+ Q T IKE+K+RP I Sbjct: 80 LRMAQEADLDLVEVAPDARPPVCKLMDYGKFKYESAQKAREARRNQVLTVIKEMKLRPKI 139 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + E+ ++ P Sbjct: 140 DSHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGFRLLQRLSADVAELGFVESAP 199 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 200 KQDGRNMIMVLAP 212 >gi|22299163|ref|NP_682410.1| translation initiation factor IF-3 [Thermosynechococcus elongatus BP-1] gi|29427442|sp|Q8DIG8|IF3_THEEB RecName: Full=Translation initiation factor IF-3 gi|22295345|dbj|BAC09172.1| translation initiation factor IF-3 [Thermosynechococcus elongatus BP-1] Length = 182 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 80/132 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E LDLV + P VCKI+D K R+ +K A EARKKQ ++ +KEVKMR I+ Sbjct: 50 IAREKELDLVLVSDKADPPVCKIIDYGKFRFEQEKKAREARKKQHTSDVKEVKMRYKIEE 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD V + + FL+ G KVK +V FRGREI H L ELL+ + ++ + PK Sbjct: 110 HDYNVCINRAERFLKAGDKVKATVTFRGREIQHSHLAEELLNRMANDLQAVAEVQQAPKQ 169 Query: 123 EGRQMIMILSSK 134 EGR MIM L+ K Sbjct: 170 EGRNMIMFLAPK 181 >gi|118497780|ref|YP_898830.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida U112] gi|134301673|ref|YP_001121641.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis WY96-3418] gi|254374590|ref|ZP_04990071.1| hypothetical protein FTDG_00764 [Francisella novicida GA99-3548] gi|254874734|ref|ZP_05247444.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] gi|118423686|gb|ABK90076.1| translation initiation factor IF-3 [Francisella novicida U112] gi|134049450|gb|ABO46521.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis WY96-3418] gi|151572309|gb|EDN37963.1| hypothetical protein FTDG_00764 [Francisella novicida GA99-3548] gi|254840733|gb|EET19169.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] Length = 178 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 43 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 103 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 162 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 163 KLEGRQMIMVLGPK 176 >gi|56707929|ref|YP_169825.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis SCHU S4] gi|89256699|ref|YP_514061.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica LVS] gi|110670400|ref|YP_666957.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC198] gi|115315106|ref|YP_763829.1| protein-synthesizing GTPase [Francisella tularensis subsp. holarctica OSU18] gi|167010451|ref|ZP_02275382.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FSC200] gi|194323752|ref|ZP_03057528.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida FTE] gi|208779843|ref|ZP_03247187.1| translation initiation factor IF-3 [Francisella novicida FTG] gi|224457009|ref|ZP_03665482.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] gi|254368006|ref|ZP_04984026.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica 257] gi|254370417|ref|ZP_04986422.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC033] gi|254373137|ref|ZP_04988626.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida GA99-3549] gi|290954130|ref|ZP_06558751.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica URFT1] gi|295312448|ref|ZP_06803220.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica URFT1] gi|56604421|emb|CAG45451.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis SCHU S4] gi|89144530|emb|CAJ79845.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica LVS] gi|110320733|emb|CAL08834.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC198] gi|115130005|gb|ABI83192.1| protein-synthesizing GTPase [Francisella tularensis subsp. holarctica OSU18] gi|134253816|gb|EBA52910.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica 257] gi|151568660|gb|EDN34314.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC033] gi|151570864|gb|EDN36518.1| translation initiation factor IF-3 [Francisella novicida GA99-3549] gi|194322116|gb|EDX19598.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida FTE] gi|208744298|gb|EDZ90598.1| translation initiation factor IF-3 [Francisella novicida FTG] gi|282159112|gb|ADA78503.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis NE061598] gi|332184283|gb|AEE26537.1| Translation initiation factor 3 [Francisella cf. novicida 3523] gi|332678496|gb|AEE87625.1| Translation initiation factor 3 [Francisella cf. novicida Fx1] Length = 155 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 20 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 140 KLEGRQMIMVLGPK 153 >gi|293556929|ref|ZP_06675490.1| translation initiation factor IF-3 [Enterococcus faecium E1039] gi|291601013|gb|EFF31304.1| translation initiation factor IF-3 [Enterococcus faecium E1039] Length = 174 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|69248640|ref|ZP_00604785.1| Initiation factor 3 [Enterococcus faecium DO] gi|68194365|gb|EAN08874.1| Initiation factor 3 [Enterococcus faecium DO] Length = 167 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 30 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 90 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 150 KMDGRSMFLTLAPK 163 >gi|227550907|ref|ZP_03980956.1| translation initiation factor IF3 [Enterococcus faecium TX1330] gi|257878889|ref|ZP_05658542.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933] gi|257881525|ref|ZP_05661178.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502] gi|257885797|ref|ZP_05665450.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501] gi|257887844|ref|ZP_05667497.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733] gi|257890747|ref|ZP_05670400.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410] gi|257893358|ref|ZP_05673011.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408] gi|257896538|ref|ZP_05676191.1| translation initiation factor IF-3 [Enterococcus faecium Com12] gi|257899519|ref|ZP_05679172.1| translation initiation factor IF-3 [Enterococcus faecium Com15] gi|260558448|ref|ZP_05830644.1| initiation factor 3 [Enterococcus faecium C68] gi|261207170|ref|ZP_05921859.1| initiation factor 3 [Enterococcus faecium TC 6] gi|289565291|ref|ZP_06445742.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF] gi|293379318|ref|ZP_06625464.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1] gi|293560311|ref|ZP_06676808.1| translation initiation factor IF-3 [Enterococcus faecium E1162] gi|293567756|ref|ZP_06679097.1| translation initiation factor IF-3 [Enterococcus faecium E1071] gi|293572984|ref|ZP_06683926.1| translation initiation factor IF-3 [Enterococcus faecium E980] gi|294615068|ref|ZP_06694954.1| translation initiation factor IF-3 [Enterococcus faecium E1636] gi|294617094|ref|ZP_06696761.1| translation initiation factor IF-3 [Enterococcus faecium E1679] gi|294620924|ref|ZP_06700125.1| translation initiation factor IF-3 [Enterococcus faecium U0317] gi|314938983|ref|ZP_07846248.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04] gi|314943466|ref|ZP_07850233.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C] gi|314948241|ref|ZP_07851635.1| translation initiation factor IF-3 [Enterococcus faecium TX0082] gi|314951601|ref|ZP_07854647.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A] gi|314991536|ref|ZP_07857012.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B] gi|314994869|ref|ZP_07859996.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01] gi|227180005|gb|EEI60977.1| translation initiation factor IF3 [Enterococcus faecium TX1330] gi|257813117|gb|EEV41875.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933] gi|257817183|gb|EEV44511.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502] gi|257821653|gb|EEV48783.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501] gi|257823898|gb|EEV50830.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733] gi|257827107|gb|EEV53733.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410] gi|257829737|gb|EEV56344.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408] gi|257833103|gb|EEV59524.1| translation initiation factor IF-3 [Enterococcus faecium Com12] gi|257837431|gb|EEV62505.1| translation initiation factor IF-3 [Enterococcus faecium Com15] gi|260075622|gb|EEW63928.1| initiation factor 3 [Enterococcus faecium C68] gi|260078798|gb|EEW66500.1| initiation factor 3 [Enterococcus faecium TC 6] gi|289162947|gb|EFD10796.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF] gi|291589341|gb|EFF21148.1| translation initiation factor IF-3 [Enterococcus faecium E1071] gi|291592010|gb|EFF23633.1| translation initiation factor IF-3 [Enterococcus faecium E1636] gi|291596652|gb|EFF27878.1| translation initiation factor IF-3 [Enterococcus faecium E1679] gi|291599535|gb|EFF30551.1| translation initiation factor IF-3 [Enterococcus faecium U0317] gi|291605761|gb|EFF35198.1| translation initiation factor IF-3 [Enterococcus faecium E1162] gi|291606886|gb|EFF36266.1| translation initiation factor IF-3 [Enterococcus faecium E980] gi|292642114|gb|EFF60278.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1] gi|313590851|gb|EFR69696.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01] gi|313593820|gb|EFR72665.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B] gi|313596295|gb|EFR75140.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A] gi|313597838|gb|EFR76683.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C] gi|313641692|gb|EFS06272.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04] gi|313645374|gb|EFS09954.1| translation initiation factor IF-3 [Enterococcus faecium TX0082] Length = 174 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|295113895|emb|CBL32532.1| bacterial translation initiation factor 3 (bIF-3) [Enterococcus sp. 7L76] Length = 167 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 91 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 151 KMDGRSMFLTLAPK 164 >gi|255973983|ref|ZP_05424569.1| initiation factor 3 [Enterococcus faecalis T2] gi|255966855|gb|EET97477.1| initiation factor 3 [Enterococcus faecalis T2] Length = 173 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+ +L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQNVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|56421253|ref|YP_148571.1| translation initiation factor IF-3 [Geobacillus kaustophilus HTA426] gi|56381095|dbj|BAD77003.1| translation initiation factor IF-3 [Geobacillus kaustophilus HTA426] Length = 239 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 102 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 161 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 162 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAP 221 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 222 KMDGRNMFLVLAPK 235 >gi|29375498|ref|NP_814652.1| translation initiation factor IF-3 [Enterococcus faecalis V583] gi|227517833|ref|ZP_03947882.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104] gi|227555025|ref|ZP_03985072.1| translation initiation factor IF-3 [Enterococcus faecalis HH22] gi|229546758|ref|ZP_04435483.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322] gi|229548850|ref|ZP_04437575.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC 29200] gi|255971364|ref|ZP_05421950.1| translation initiation factor IF-3 [Enterococcus faecalis T1] gi|256617782|ref|ZP_05474628.1| initiation factor 3 [Enterococcus faecalis ATCC 4200] gi|256761668|ref|ZP_05502248.1| translation initiation factor IF-3 [Enterococcus faecalis T3] gi|256854243|ref|ZP_05559607.1| translation initiation factor IF-3 [Enterococcus faecalis T8] gi|256957230|ref|ZP_05561401.1| initiation factor 3 [Enterococcus faecalis DS5] gi|256964267|ref|ZP_05568438.1| initiation factor 3 [Enterococcus faecalis HIP11704] gi|257077798|ref|ZP_05572159.1| initiation factor 3 [Enterococcus faecalis JH1] gi|257081157|ref|ZP_05575518.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol] gi|257083826|ref|ZP_05578187.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1] gi|257086251|ref|ZP_05580612.1| initiation factor 3 [Enterococcus faecalis D6] gi|257089324|ref|ZP_05583685.1| translation initiation factor IF-3 [Enterococcus faecalis CH188] gi|257415476|ref|ZP_05592470.1| initiation factor 3 [Enterococcus faecalis AR01/DG] gi|257418508|ref|ZP_05595502.1| initiation factor [Enterococcus faecalis T11] gi|257421158|ref|ZP_05598148.1| translation initiation factor IF-3 [Enterococcus faecalis X98] gi|294781324|ref|ZP_06746670.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1] gi|300860032|ref|ZP_07106120.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD Ef11] gi|307267989|ref|ZP_07549377.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248] gi|307271913|ref|ZP_07553181.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855] gi|307275331|ref|ZP_07556474.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134] gi|307278391|ref|ZP_07559466.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860] gi|307286721|ref|ZP_07566807.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109] gi|307290930|ref|ZP_07570820.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411] gi|312901544|ref|ZP_07760817.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470] gi|312904474|ref|ZP_07763633.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635] gi|312952819|ref|ZP_07771681.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102] gi|39931262|sp|Q837C9|IF3_ENTFA RecName: Full=Translation initiation factor IF-3 gi|29342958|gb|AAO80722.1| translation initiation factor IF-3 [Enterococcus faecalis V583] gi|227074723|gb|EEI12686.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104] gi|227175851|gb|EEI56823.1| translation initiation factor IF-3 [Enterococcus faecalis HH22] gi|229306079|gb|EEN72075.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC 29200] gi|229308107|gb|EEN74094.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322] gi|255962382|gb|EET94858.1| translation initiation factor IF-3 [Enterococcus faecalis T1] gi|256597309|gb|EEU16485.1| initiation factor 3 [Enterococcus faecalis ATCC 4200] gi|256682919|gb|EEU22614.1| translation initiation factor IF-3 [Enterococcus faecalis T3] gi|256709803|gb|EEU24847.1| translation initiation factor IF-3 [Enterococcus faecalis T8] gi|256947726|gb|EEU64358.1| initiation factor 3 [Enterococcus faecalis DS5] gi|256954763|gb|EEU71395.1| initiation factor 3 [Enterococcus faecalis HIP11704] gi|256985828|gb|EEU73130.1| initiation factor 3 [Enterococcus faecalis JH1] gi|256989187|gb|EEU76489.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol] gi|256991856|gb|EEU79158.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1] gi|256994281|gb|EEU81583.1| initiation factor 3 [Enterococcus faecalis D6] gi|256998136|gb|EEU84656.1| translation initiation factor IF-3 [Enterococcus faecalis CH188] gi|257157304|gb|EEU87264.1| initiation factor 3 [Enterococcus faecalis ARO1/DG] gi|257160336|gb|EEU90296.1| initiation factor [Enterococcus faecalis T11] gi|257162982|gb|EEU92942.1| translation initiation factor IF-3 [Enterococcus faecalis X98] gi|294451660|gb|EFG20116.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1] gi|300850850|gb|EFK78599.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD Ef11] gi|306498000|gb|EFM67527.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411] gi|306502199|gb|EFM71483.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109] gi|306504897|gb|EFM74092.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860] gi|306507965|gb|EFM77092.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134] gi|306511419|gb|EFM80421.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855] gi|306515630|gb|EFM84157.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248] gi|310629335|gb|EFQ12618.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102] gi|310632172|gb|EFQ15455.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635] gi|311291339|gb|EFQ69895.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470] gi|315027099|gb|EFT39031.1| translation initiation factor IF-3 [Enterococcus faecalis TX2137] gi|315029784|gb|EFT41716.1| translation initiation factor IF-3 [Enterococcus faecalis TX4000] gi|315032457|gb|EFT44389.1| translation initiation factor IF-3 [Enterococcus faecalis TX0017] gi|315034309|gb|EFT46241.1| translation initiation factor IF-3 [Enterococcus faecalis TX0027] gi|315145799|gb|EFT89815.1| translation initiation factor IF-3 [Enterococcus faecalis TX2141] gi|315148071|gb|EFT92087.1| translation initiation factor IF-3 [Enterococcus faecalis TX4244] gi|315149673|gb|EFT93689.1| translation initiation factor IF-3 [Enterococcus faecalis TX0012] gi|315152986|gb|EFT97002.1| translation initiation factor IF-3 [Enterococcus faecalis TX0031] gi|315155217|gb|EFT99233.1| translation initiation factor IF-3 [Enterococcus faecalis TX0043] gi|315157544|gb|EFU01561.1| translation initiation factor IF-3 [Enterococcus faecalis TX0312] gi|315163027|gb|EFU07044.1| translation initiation factor IF-3 [Enterococcus faecalis TX0645] gi|315165226|gb|EFU09243.1| translation initiation factor IF-3 [Enterococcus faecalis TX1302] gi|315167951|gb|EFU11968.1| translation initiation factor IF-3 [Enterococcus faecalis TX1341] gi|315172016|gb|EFU16033.1| translation initiation factor IF-3 [Enterococcus faecalis TX1342] gi|315174843|gb|EFU18860.1| translation initiation factor IF-3 [Enterococcus faecalis TX1346] gi|315574173|gb|EFU86364.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309B] gi|315577304|gb|EFU89495.1| translation initiation factor IF-3 [Enterococcus faecalis TX0630] gi|315581684|gb|EFU93875.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309A] gi|323480094|gb|ADX79533.1| translation initiation factor IF-3 [Enterococcus faecalis 62] gi|327534494|gb|AEA93328.1| translation initiation factor IF3 [Enterococcus faecalis OG1RF] gi|329577910|gb|EGG59331.1| translation initiation factor IF-3 [Enterococcus faecalis TX1467] Length = 173 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|258615039|ref|ZP_05712809.1| translation initiation factor IF-3 [Enterococcus faecium DO] Length = 168 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 91 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 151 KMDGRSMFLTLAPK 164 >gi|148653934|ref|YP_001281027.1| translation initiation factor IF-3 [Psychrobacter sp. PRwf-1] gi|148573018|gb|ABQ95077.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter sp. PRwf-1] Length = 167 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 62/130 (47%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ NLDLVE+ P VCKI+D ++ Y ++ A EA+K QK T +KE+K+RP D Sbjct: 34 ARDDNLDLVELVPDAKPPVCKIMDYKRYLYDQKQKAKEAKKNQKQTQLKEMKLRPSTDEA 93 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ I FL D KVK++++FRGRE+ H +LGR+ L I EIS ++ PK E Sbjct: 94 DYQVKLRKIISFLEDQDKVKVTIRFRGREMAHTELGRQQLERIIADTAEISNVEQHPKME 153 Query: 124 GRQMIMILSS 133 GRQM M+L Sbjct: 154 GRQMGMLLGP 163 >gi|212638371|ref|YP_002314891.1| translation initiation factor 3 [Anoxybacillus flavithermus WK1] gi|212559851|gb|ACJ32906.1| Translation initiation factor 3 (IF-3) [Anoxybacillus flavithermus WK1] Length = 180 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KE+++ P I Sbjct: 44 LEIAARLNLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEIRLSPTI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I ++ P Sbjct: 104 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFAEACADIGTVETAP 163 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 164 KMDGRSMFLVLAPK 177 >gi|320011785|gb|ADW06635.1| translation initiation factor IF-3 [Streptomyces flavogriseus ATCC 33331] Length = 249 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEELGFIESNP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLGP 196 >gi|311894943|dbj|BAJ27351.1| putative translation initiation factor IF-3 [Kitasatospora setae KM-6054] Length = 229 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + + E+ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLADDVQELGFVESAP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|290961732|ref|YP_003492914.1| translation initiation factor IF-3 [Streptomyces scabiei 87.22] gi|260651258|emb|CBG74380.1| translation initiation factor IF-3 [Streptomyces scabiei 87.22] Length = 232 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEDLGFVESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|146307005|ref|YP_001187470.1| translation initiation factor IF-3 [Pseudomonas mendocina ymp] gi|145575206|gb|ABP84738.1| bacterial translation initiation factor 3 (bIF-3) [Pseudomonas mendocina ymp] Length = 177 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LNAAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAIAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E+ ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEADLAELGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|104774348|ref|YP_619328.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514443|ref|YP_813349.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300813175|ref|ZP_07093549.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|103423429|emb|CAI98302.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093758|gb|ABJ58911.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300495833|gb|EFK30981.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325126143|gb|ADY85473.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 173 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|325475123|gb|EGC78309.1| translation initiation factor IF-3 [Treponema denticola F0402] Length = 194 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVE+ + P VCKI+D K R+ ++K +++K QK ++E++M+P I Sbjct: 56 VKMAAEAGLDLVEVAPTAKPPVCKIIDYGKYRFQMEKKLRDSKKNQKQQMMREIRMQPKI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 HDL+ K I FL G KVK++V+F GRE+ H +LG E+L+ + E+ G E ++ Sbjct: 116 HDHDLEFKSSHIKKFLDGGDKVKVTVRFWGRELAHTELGYEVLNKVLEKLGGEEACTLEK 175 Query: 119 EPKFEGRQMIMILSSK 134 +P EGR M M LS K Sbjct: 176 KPAMEGRTMSMTLSPK 191 >gi|86741868|ref|YP_482268.1| translation initiation factor IF-3 [Frankia sp. CcI3] gi|86568730|gb|ABD12539.1| bacterial translation initiation factor 3 (bIF-3) [Frankia sp. CcI3] Length = 205 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MAQE +LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 57 MRMAQEVDLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 117 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSADVADLGYVEAQP 176 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 177 KQDGRNMTMVMAP 189 >gi|239827996|ref|YP_002950620.1| translation initiation factor IF-3 [Geobacillus sp. WCH70] gi|239808289|gb|ACS25354.1| translation initiation factor IF-3 [Geobacillus sp. WCH70] Length = 190 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 54 LEIAARLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 114 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLERFSEACSDIAVVETAP 173 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 174 KMDGRNMFLVLAPK 187 >gi|325685797|gb|EGD27870.1| translation initiation factor IF3 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 173 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|282864276|ref|ZP_06273332.1| translation initiation factor IF-3 [Streptomyces sp. ACTE] gi|282560763|gb|EFB66309.1| translation initiation factor IF-3 [Streptomyces sp. ACTE] Length = 205 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|313124183|ref|YP_004034442.1| translation initiation factor if-3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280746|gb|ADQ61465.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 173 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|259046988|ref|ZP_05737389.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC 49175] gi|259036431|gb|EEW37686.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC 49175] Length = 167 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 31 LRLAEQAGLDLVLVSPNAKPPVARIMDYGKYRFEQQKKEREARKNQKVINIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLKA FL G KVK S++F+GR I H+++G+++L + E+ EI+ ++ + Sbjct: 91 DENDFNTKLKAAIKFLEKGDKVKASIRFKGRAITHKEIGQKVLERLAEQVSEIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 151 KMDGRSMFLMLAPK 164 >gi|271967366|ref|YP_003341562.1| translation initiation factor 3 (IF-3)-like protein [Streptosporangium roseum DSM 43021] gi|270510541|gb|ACZ88819.1| Translation initiation factor 3 (IF-3)-like protein [Streptosporangium roseum DSM 43021] Length = 222 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ ++ P VCK++D K +Y A EAR+ Q T IKE+K+RP I Sbjct: 52 LKLAQESDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARRNQAYTIIKEIKLRPKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + E ++ ++ +P Sbjct: 112 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGFRLLQRLAEDVTDLGFVESQP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 172 KQDGRNMIMVIGP 184 >gi|152987833|ref|YP_001347871.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PA7] gi|150962991|gb|ABR85016.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PA7] Length = 177 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 41 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|16273648|ref|NP_439469.1| translation initiation factor IF-3 [Haemophilus influenzae Rd KW20] gi|309750873|gb|ADO80857.1| Translation initiation factor IF-3 [Haemophilus influenzae R2866] gi|309973160|gb|ADO96361.1| Translation initiation factor IF-3 [Haemophilus influenzae R2846] Length = 180 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 44 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P Sbjct: 104 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAP 163 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 164 GKLEGRQAVMVLAPK 178 >gi|302541296|ref|ZP_07293638.1| translation initiation factor IF-3 [Streptomyces hygroscopicus ATCC 53653] gi|302458914|gb|EFL22007.1| translation initiation factor IF-3 [Streptomyces himastatinicus ATCC 53653] Length = 233 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 63 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 123 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFVESNP 182 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 183 KQDGRNMIMVLGP 195 >gi|300173542|ref|YP_003772708.1| translation initiation factor IF-3 [Leuconostoc gasicomitatum LMG 18811] gi|299887921|emb|CBL91889.1| Translation initiation factor IF-3 [Leuconostoc gasicomitatum LMG 18811] Length = 143 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A ++N DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDSNQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELNDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 128 MDGRQMFLVLAPR 140 >gi|42527659|ref|NP_972757.1| translation initiation factor IF-3 [Treponema denticola ATCC 35405] gi|41818487|gb|AAS12676.1| translation initiation factor IF-3 [Treponema denticola ATCC 35405] Length = 175 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVE+ + P VCKI+D K R+ ++K +++K QK ++E++M+P I Sbjct: 37 VKMAAEAGLDLVEVAPTAKPPVCKIIDYGKYRFQMEKKLRDSKKNQKQQMMREIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 HDL+ K I FL G KVK++V+F GRE+ H +LG E+L+ + E+ G E ++ Sbjct: 97 HDHDLEFKSSHIKKFLDGGDKVKVTVRFWGRELAHTELGYEVLNKVLEKLGGEEACTLEK 156 Query: 119 EPKFEGRQMIMILSSK 134 +P EGR M M LS K Sbjct: 157 KPAMEGRTMSMTLSPK 172 >gi|297182028|gb|ADI18203.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0200_39N20] Length = 144 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A+LDLVE+ P VC+++D K +Y K + AR+ QK +KEVKM+P I Sbjct: 7 LEMAESADLDLVEVSPKAKPPVCRLMDYGKFKYQQSKRSHVARQNQKIIHLKEVKMKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ ++ Sbjct: 67 EEHDFQFKLRNALRFLEDGDKVKVGVRFMGRQIAHKDLGIELLEKFQAEIGDGGTVEQPI 126 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 127 TSEGRSMHMILAP 139 >gi|257064217|ref|YP_003143889.1| bacterial translation initiation factor 3 (bIF-3) [Slackia heliotrinireducens DSM 20476] gi|256791870|gb|ACV22540.1| bacterial translation initiation factor 3 (bIF-3) [Slackia heliotrinireducens DSM 20476] Length = 197 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLVEI + P VC+I+D K +Y A +ARKKQ IKE+K RP I Sbjct: 49 LRIAENQQLDLVEIAPNANPPVCRIMDYGKFKYDQAIKAKQARKKQTKVEIKEMKFRPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D K K I FL+DG KVKI++ FRGRE+ H D G +L + + +++ ++ +P Sbjct: 109 DIGDYTTKKKHIIRFLQDGAKVKITIMFRGREMAHPDQGLSILERLADDLKDVAVVENQP 168 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 169 KMEGRNMHMLIAP 181 >gi|145633197|ref|ZP_01788928.1| translation initiation factor IF-3 [Haemophilus influenzae 3655] gi|145634936|ref|ZP_01790643.1| translation initiation factor IF-3 [Haemophilus influenzae PittAA] gi|229845141|ref|ZP_04465276.1| translation initiation factor IF-3 [Haemophilus influenzae 6P18H1] gi|144986043|gb|EDJ92633.1| translation initiation factor IF-3 [Haemophilus influenzae 3655] gi|145267802|gb|EDK07799.1| translation initiation factor IF-3 [Haemophilus influenzae PittAA] gi|229811977|gb|EEP47671.1| translation initiation factor IF-3 [Haemophilus influenzae 6P18H1] Length = 194 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 58 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P Sbjct: 118 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAP 177 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 178 GKLEGRQAVMVLAPK 192 >gi|52842919|ref|YP_096718.1| translational initiation factor IF-3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630030|gb|AAU28771.1| translational initiation factor IF-3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 129 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/126 (43%), Positives = 83/126 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLL 120 Query: 129 MILSSK 134 M+LS K Sbjct: 121 MVLSPK 126 >gi|296110553|ref|YP_003620934.1| translation initiation factor IF-3 [Leuconostoc kimchii IMSNU 11154] gi|295832084|gb|ADG39965.1| translation initiation factor IF-3 [Leuconostoc kimchii IMSNU 11154] Length = 143 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A ++N DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDSNQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQLKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|146282711|ref|YP_001172864.1| translation initiation factor IF-3 [Pseudomonas stutzeri A1501] gi|145570916|gb|ABP80022.1| translation initiation factor IF-3 [Pseudomonas stutzeri A1501] gi|327481050|gb|AEA84360.1| translation initiation factor IF-3 [Pseudomonas stutzeri DSM 4166] Length = 177 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADANPPVCRIMDYGKHLFEKKKQAAAAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ EI ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEADLIEIGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|169634341|ref|YP_001708077.1| translation initiation factor IF-3 [Acinetobacter baumannii SDF] gi|169797156|ref|YP_001714949.1| translation initiation factor IF-3 [Acinetobacter baumannii AYE] gi|238688030|sp|B0V5P1|IF3_ACIBY RecName: Full=Translation initiation factor IF-3 gi|238688266|sp|B0VV99|IF3_ACIBS RecName: Full=Translation initiation factor IF-3 gi|169150083|emb|CAM87977.1| protein chain initiation factor IF-3 [Acinetobacter baumannii AYE] gi|169153133|emb|CAP02212.1| protein chain initiation factor IF-3 [Acinetobacter baumannii] Length = 183 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A+LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 47 LRAAEDADLDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E+ ++ P Sbjct: 107 DVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAELGVVEQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+L K Sbjct: 167 KMEGRQMGMLLGPK 180 >gi|328881243|emb|CCA54482.1| Translation initiation factor 3 [Streptomyces venezuelae ATCC 10712] Length = 257 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 75 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 135 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEELGFIESNP 194 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 195 KQDGRNMIMVLGP 207 >gi|158523053|ref|YP_001530923.1| initiation factor 3 [Desulfococcus oleovorans Hxd3] gi|158511879|gb|ABW68846.1| initiation factor 3 [Desulfococcus oleovorans Hxd3] Length = 139 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLVE+ +V P VCKI+D + +Y K EA+KKQ S IKE+K+RP D H Sbjct: 8 AEDVGLDLVEVSPNVDPPVCKIMDYGRYKYEQTKKQHEAKKKQASFQIKEIKVRPKTDTH 67 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ A+ FL KVK++V FRGREI G LL I ++ +++ ++ P+FE Sbjct: 68 DLNTKIGAMRKFLDRKDKVKVTVFFRGREITLSAKGMNLLQEIAQQVEDVAVVEHAPRFE 127 Query: 124 GRQMIMILSSKC 135 GR + MIL+ K Sbjct: 128 GRSLFMILAPKV 139 >gi|29833279|ref|NP_827913.1| translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] gi|39931256|sp|Q828D2|IF3_STRAW RecName: Full=Translation initiation factor IF-3 gi|29610401|dbj|BAC74448.1| putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] Length = 241 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLATDVEDLGFVESSP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|288918242|ref|ZP_06412597.1| translation initiation factor IF-3 [Frankia sp. EUN1f] gi|288350412|gb|EFC84634.1| translation initiation factor IF-3 [Frankia sp. EUN1f] Length = 166 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 17 MRLAQEADLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 77 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 136 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 137 KQDGRNMTMVMAP 149 >gi|227548135|ref|ZP_03978184.1| translation initiation factor IF-3 [Corynebacterium lipophiloflavum DSM 44291] gi|227079797|gb|EEI17760.1| translation initiation factor IF-3 [Corynebacterium lipophiloflavum DSM 44291] Length = 181 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 44 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQDQKAREARKNQQQTVVKEQKFRPKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FL G KVK+++ FRGRE +LG LL + + GE+ ++ PK Sbjct: 104 EHDYLTKKANVERFLEKGNKVKVTIMFRGREQSRPELGYRLLERLADDIGELGVVESRPK 163 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 164 QDGRNMTMVFGP 175 >gi|330503838|ref|YP_004380707.1| translation initiation factor IF-3 [Pseudomonas mendocina NK-01] gi|328918124|gb|AEB58955.1| translation initiation factor IF-3 [Pseudomonas mendocina NK-01] Length = 177 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAIAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL +++ E+ ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEQDLIELGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|227524681|ref|ZP_03954730.1| protein translation initiation factor 3 [Lactobacillus hilgardii ATCC 8290] gi|227088165|gb|EEI23477.1| protein translation initiation factor 3 [Lactobacillus hilgardii ATCC 8290] Length = 169 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 31 LKLAEDAELDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++ ++F+GR I H+++GR +L + + +++ + P Sbjct: 91 DVNDFNTKLKNAKKFLAKGEKVRVLIRFKGRAITHKEIGRNVLERMAKETDDVATVTQRP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 151 KMDGRSMFLMLSPK 164 >gi|317491931|ref|ZP_07950365.1| translation initiation factor IF-3 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920052|gb|EFV41377.1| translation initiation factor IF-3 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 138 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKIVQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 61 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLSELAVVESFP 120 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 121 TKIEGRQMIMVLAPK 135 >gi|329944515|ref|ZP_08292680.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170 str. F0386] gi|328530280|gb|EGF57159.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170 str. F0386] Length = 199 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 140 RQDGRNMVMVLAP 152 >gi|260584104|ref|ZP_05851852.1| translation initiation factor IF-3 [Granulicatella elegans ATCC 700633] gi|260158730|gb|EEW93798.1| translation initiation factor IF-3 [Granulicatella elegans ATCC 700633] Length = 167 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 31 LRLAEQAGLDLVLVSPNAKPPVARIMDYGKYRFEQQKKEREARKNQKVINIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLKA FL G KVK +++F+GR I H+++G+++L + E+ E++ ++ + Sbjct: 91 DENDFNTKLKAAQKFLEKGDKVKATIRFKGRAITHKEIGQKVLERLAEQVSELATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 151 KMDGRSMFLMLAPK 164 >gi|304404966|ref|ZP_07386626.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] gi|304345845|gb|EFM11679.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] Length = 135 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA + ++DLV + P VC+I+D K RY QK EARK QK +KEV R I+ Sbjct: 1 MAIDLSMDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDLKEVWFRSNIEE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q KL+ + FL++G KVK SV++RGREI H +G+ +L + + E+ ++ PK Sbjct: 61 NDYQTKLRNVVKFLKEGDKVKCSVRYRGREIAHAAIGQRILDRLSKEVAELCSVERVPKL 120 Query: 123 EGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 121 EGRSMIMILAPK 132 >gi|241894789|ref|ZP_04782085.1| translation initiation factor 3 [Weissella paramesenteroides ATCC 33313] gi|241872001|gb|EER75752.1| translation initiation factor 3 [Weissella paramesenteroides ATCC 33313] Length = 143 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLV + ++ P V KI++ K ++ QK E RK QK IKE+++ P ID Sbjct: 8 RLADDADLDLVLVQANAKPPVAKIMNYGKFKFEAQKKQREQRKNQKVVNIKEIRLSPTID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++D K FL G KVK+S++FRGR I H+++GRE+++ + EI++++ K Sbjct: 68 VNDFNTKKNNAIKFLNKGNKVKVSIRFRGRAITHKEIGREVMNRMAMDLEEIAKVESRAK 127 Query: 122 FEGRQMIMILSSK 134 EGR M M+L+ K Sbjct: 128 MEGRSMFMVLAPK 140 >gi|260438623|ref|ZP_05792439.1| translation initiation factor IF-3 [Butyrivibrio crossotus DSM 2876] gi|292809217|gb|EFF68422.1| translation initiation factor IF-3 [Butyrivibrio crossotus DSM 2876] Length = 164 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQEA LDL++I + P VCKI D K +Y + EARKKQK+ IKEV++ P I+ Sbjct: 31 KLAQEAELDLIKIAPTAQPPVCKIADYGKYKYEQIRREKEARKKQKTVEIKEVRLSPNIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G KVK++++FRGRE+ H + +L + E+ + S I+ K Sbjct: 91 SNDLNTKVNAARKFLEKGDKVKVTLRFRGRELAHMSSNKHILDDFAEQLADCSVIEKPAK 150 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 151 VEGRSMAMILAEK 163 >gi|320531667|ref|ZP_08032608.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136142|gb|EFW28149.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 171 str. F0337] Length = 185 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 140 RQDGRNMVMVLAP 152 >gi|325957293|ref|YP_004292705.1| translational initiation factor IF3 [Lactobacillus acidophilus 30SC] gi|325333858|gb|ADZ07766.1| translational initiation factor IF3 [Lactobacillus acidophilus 30SC] gi|327184023|gb|AEA32470.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1118] Length = 147 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFVSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAESTSDIANVISK 126 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 127 PKMEGRSMFLMLAPKS 142 >gi|92113923|ref|YP_573851.1| translation initiation factor 3 [Chromohalobacter salexigens DSM 3043] gi|91797013|gb|ABE59152.1| bacterial translation initiation factor 3 (bIF-3) [Chromohalobacter salexigens DSM 3043] Length = 163 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLV+I S+ P VCKI+D K + +K +KK K +KEVK RP Sbjct: 29 LERAEAEGLDLVQI-SNADPIVCKIMDYGKFLFEQKKQRSAQKKKTKQIQVKEVKFRPGT 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKLK + FL G K K++++FRGRE+ HQD+GR+L+ I +++ ++ P Sbjct: 88 DEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEDMATVESFP 147 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIMIL+ K Sbjct: 148 KMEGRQMIMILAPK 161 >gi|116630037|ref|YP_815209.1| translation initiation factor 3 [Lactobacillus gasseri ATCC 33323] gi|238853776|ref|ZP_04644142.1| translation initiation factor IF-3 [Lactobacillus gasseri 202-4] gi|282851343|ref|ZP_06260708.1| translation initiation factor IF-3 [Lactobacillus gasseri 224-1] gi|300361200|ref|ZP_07057377.1| translation initiation factor IF3 [Lactobacillus gasseri JV-V03] gi|311110334|ref|ZP_07711731.1| translation initiation factor IF-3 [Lactobacillus gasseri MV-22] gi|116095619|gb|ABJ60771.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus gasseri ATCC 33323] gi|238833585|gb|EEQ25856.1| translation initiation factor IF-3 [Lactobacillus gasseri 202-4] gi|282557311|gb|EFB62908.1| translation initiation factor IF-3 [Lactobacillus gasseri 224-1] gi|300353819|gb|EFJ69690.1| translation initiation factor IF3 [Lactobacillus gasseri JV-V03] gi|311065488|gb|EFQ45828.1| translation initiation factor IF-3 [Lactobacillus gasseri MV-22] Length = 172 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 85/132 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A+LDLV + + P V +I+D K R+ QK A E RK QK +KE+++ P I Sbjct: 31 LRKAADADLDLVLLSPNAKPPVARIMDYGKFRFEQQKKAKENRKNQKVMAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KLK + FL G KV++S++FRGR I H++LG+++L + + ++S + +P Sbjct: 91 EGNDFDTKLKHVRKFLTKGAKVRVSIRFRGRAITHKELGKQVLEKMADEASDLSNVVTKP 150 Query: 121 KFEGRQMIMILS 132 K EGR M ++L+ Sbjct: 151 KMEGRSMFLMLA 162 >gi|124267076|ref|YP_001021080.1| translation initiation factor 3 [Methylibium petroleiphilum PM1] gi|124259851|gb|ABM94845.1| bacterial translation initiation factor 3 (bIF-3) [Methylibium petroleiphilum PM1] Length = 160 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRLAGEADVDLVEISATADPPVCRLMDYGKFKYAEQKKAAEAKAKQHVIDIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL +G K K+++++RGREI HQD+G LL I++ ++S ++ P Sbjct: 84 DEGDYAIKMRNLRRFLEEGDKGKVTLRYRGREITHQDIGMRLLERIRDELADVSVVENMP 143 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 144 KLEGRQMIMVLGPK 157 >gi|42519518|ref|NP_965448.1| translation initiation factor IF-3 [Lactobacillus johnsonii NCC 533] gi|227889529|ref|ZP_04007334.1| translation initiation factor IF3 [Lactobacillus johnsonii ATCC 33200] gi|268319907|ref|YP_003293563.1| translation initiation factor IF-3 [Lactobacillus johnsonii FI9785] gi|61213124|sp|Q74IC4|IF3_LACJO RecName: Full=Translation initiation factor IF-3 gi|41583807|gb|AAS09414.1| translation initiation factor IF-3 [Lactobacillus johnsonii NCC 533] gi|227850007|gb|EEJ60093.1| translation initiation factor IF3 [Lactobacillus johnsonii ATCC 33200] gi|262398282|emb|CAX67296.1| translation initiation factor IF-3 [Lactobacillus johnsonii FI9785] gi|329667757|gb|AEB93705.1| translation initiation factor IF-3 [Lactobacillus johnsonii DPC 6026] Length = 172 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 85/132 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A+LDLV + + P V +I+D K R+ QK A E RK QK +KE+++ P I Sbjct: 31 LRKAADADLDLVLLSPNAKPPVARIMDYGKFRFEQQKKAKENRKNQKVMAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KLK + FL G KV++S++FRGR I H++LG+++L + + ++S + +P Sbjct: 91 EGNDFDTKLKHVRKFLTKGAKVRVSIRFRGRAITHKELGKQVLEKMADEASDLSNVVTKP 150 Query: 121 KFEGRQMIMILS 132 K EGR M ++L+ Sbjct: 151 KMEGRSMFLMLA 162 >gi|257056555|ref|YP_003134387.1| translation initiation factor 3 [Saccharomonospora viridis DSM 43017] gi|256586427|gb|ACU97560.1| bacterial translation initiation factor 3 (bIF-3) [Saccharomonospora viridis DSM 43017] Length = 168 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V K++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 17 LRLAQEADLDLVEVAPQARPPVAKLMDYGKYKYESAQKARESRRNQQLTVIKEQKLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 77 DPHDYETKKGHVSRFLEAGNKVKVTIMFRGREQSRPELGFRLLQRLAEDVAELGFVESKP 136 Query: 121 KFEGRQMIMILS 132 K +GR M+M+L+ Sbjct: 137 KQDGRNMVMVLA 148 >gi|170079295|ref|YP_001735933.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002] gi|238692800|sp|B1XM04|IF3_SYNP2 RecName: Full=Translation initiation factor IF-3 gi|169886964|gb|ACB00678.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002] Length = 178 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/127 (44%), Positives = 82/127 (64%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I+ HD QV Sbjct: 49 DLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQHNADLKEVKMRYKIEEHDYQV 108 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 ++ + FL+ G KVK ++ FRGREI H +L ++LL + + E+ I PK EGR M Sbjct: 109 RVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNM 168 Query: 128 IMILSSK 134 +MIL+ K Sbjct: 169 MMILAPK 175 >gi|313905725|ref|ZP_07839085.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6] gi|313469432|gb|EFR64774.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6] Length = 134 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 81/132 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ+A LDLV++ P VCKI+D K RY + EARKKQ + IKE++M P ID Sbjct: 1 MAQDAGLDLVKVAPMAKPPVCKIVDYGKYRYEQARREKEARKKQHTVDIKEIRMSPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K+ A FL G KVK++++FRGRE+ H R +L + + +I ++ +PK Sbjct: 61 NDLNTKVGAARKFLAKGDKVKVTIRFRGREMAHMQASRPILLDFAKALEDICIVEKQPKI 120 Query: 123 EGRQMIMILSSK 134 EGR M ++L K Sbjct: 121 EGRNMSIVLGQK 132 >gi|77458159|ref|YP_347664.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf0-1] gi|330810592|ref|YP_004355054.1| translation initiation factor IF-3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|77382162|gb|ABA73675.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf0-1] gi|327378700|gb|AEA70050.1| translation initiation factor IF-3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 177 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL +++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEQDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPK 174 >gi|159037498|ref|YP_001536751.1| translation initiation factor IF-3 [Salinispora arenicola CNS-205] gi|157916333|gb|ABV97760.1| translation initiation factor IF-3 [Salinispora arenicola CNS-205] Length = 239 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 64 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 124 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEISELGYVEAAP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 184 KQDGRNMIMVLAP 196 >gi|145594425|ref|YP_001158722.1| translation initiation factor IF-3 [Salinispora tropica CNB-440] gi|145303762|gb|ABP54344.1| bacterial translation initiation factor 3 (bIF-3) [Salinispora tropica CNB-440] Length = 204 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEISELGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|182439698|ref|YP_001827417.1| translation initiation factor IF-3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780362|ref|ZP_08239627.1| Translation initiation factor IF-3 [Streptomyces cf. griseus XylebKG-1] gi|62896304|emb|CAH94290.1| translation initiation factor IF-3 [Streptomyces griseus subsp. griseus] gi|178468214|dbj|BAG22734.1| putative translation initiation factor IF-3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660695|gb|EGE45541.1| Translation initiation factor IF-3 [Streptomyces cf. griseus XylebKG-1] Length = 238 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 54 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 114 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 173 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 174 KQDGRNMIMVLGP 186 >gi|332637333|ref|ZP_08416196.1| translation initiation factor IF-3 [Weissella cibaria KACC 11862] Length = 165 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLV + ++ P V KI+D K R+ QK E RK QK IKEV++ P ID Sbjct: 31 IADEQELDLVLVQANAKPPVAKIMDYGKFRFDSQKKQREQRKNQKIVSIKEVRLSPTIDD 90 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D K K FL G KVK+S++FRGR I H+++GRE++ EI++++ K Sbjct: 91 NDFNTKKKNAVKFLEKGNKVKVSIRFRGRAITHKEIGREVMDRFATDLEEIAKVESRAKM 150 Query: 123 EGRQMIMILSSK 134 EGR M M+L+ K Sbjct: 151 EGRSMFMVLAPK 162 >gi|90579636|ref|ZP_01235445.1| putative initiation factor IF3 [Vibrio angustum S14] gi|90439210|gb|EAS64392.1| putative initiation factor IF3 [Vibrio angustum S14] Length = 137 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A +A +DLVEI + P VC+++D K + K A E +K QK IKEVK RP Sbjct: 1 MEVALDAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK +I+ + P Sbjct: 61 DEGDYQVKLRNLTRFLEEGNKGKVTLRFRGREMAHQGIGIELLNRIKGELEDIAVCESFP 120 Query: 121 -KFEGRQMIMILSSK 134 + EGRQM M+L+ K Sbjct: 121 NRVEGRQMTMMLAPK 135 >gi|170726836|ref|YP_001760862.1| translation initiation factor IF-3 [Shewanella woodyi ATCC 51908] gi|259491513|sp|B1KG60|IF3_SHEWM RecName: Full=Translation initiation factor IF-3 gi|169812183|gb|ACA86767.1| translation initiation factor IF-3 [Shewanella woodyi ATCC 51908] Length = 180 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K+ E +KKQK +KE+K RP D Sbjct: 46 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSQKEQKKKQKIVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ ++ FL DG K K++++FRGRE+ HQ LG LL+ IK+ EI+ ++ PK Sbjct: 106 ENDYQVKLRNLNRFLDDGDKAKVTLRFRGREMAHQSLGMNLLNRIKDDLAEIAVVESFPK 165 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 166 MEGRQAVMVLAPK 178 >gi|238063946|ref|ZP_04608655.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149] gi|237885757|gb|EEP74585.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149] Length = 216 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITELGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|70729482|ref|YP_259220.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf-5] gi|7387794|sp|Q9X6E7|IF3_PSEFL RecName: Full=Translation initiation factor IF-3 gi|123775997|sp|Q4KEW3|IF3_PSEF5 RecName: Full=Translation initiation factor IF-3 gi|4972784|gb|AAD34787.1|AF136400_1 initiation factor IF3 [Pseudomonas fluorescens] gi|68343781|gb|AAY91387.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf-5] Length = 183 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLQEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPK 180 >gi|297565682|ref|YP_003684654.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946] gi|296850131|gb|ADH63146.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946] Length = 174 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE DLV + + P V ++LD K RY Q+ EARKK K T +K +K RP I Sbjct: 34 LRMAQEREYDLVLVSPNAVPPVARLLDYGKWRYEQQQAEKEARKKAKRTEVKSIKFRPKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL + FL +G KVKI++ FRGRE+ H +LG +L G + ++ +P Sbjct: 94 DEHDYQTKLGHVRRFLEEGHKVKITIMFRGREMAHPELGSRILERAVADLGPAAVVELKP 153 Query: 121 KFEGRQMIMILSS 133 + GR M M+++ Sbjct: 154 EMAGRDMNMVIAP 166 >gi|291443486|ref|ZP_06582876.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] gi|291346433|gb|EFE73337.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] Length = 255 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 71 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 130 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 131 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 190 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 191 KQDGRNMIMVLGP 203 >gi|315641763|ref|ZP_07896777.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952] gi|315482526|gb|EFU73064.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952] Length = 173 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ANLD+V + + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LKIAEQANLDVVLVAPTAKPPVARIMDYGKYRFEQQKKEREARKKQKVISVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+ +L + E +++ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRLAEETADVATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPK 170 >gi|117923679|ref|YP_864296.1| translation initiation factor 3 [Magnetococcus sp. MC-1] gi|117607435|gb|ABK42890.1| bacterial translation initiation factor 3 (bIF-3) [Magnetococcus sp. MC-1] Length = 182 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 4/135 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVE--ARKKQKSTGIKEVKMRPVID 61 AQ LDLVE+ P VCKI+D K +Y QK E ARK Q KEVK RP D Sbjct: 47 AQNVGLDLVEVAPEAKPPVCKIMDYTKYKY--QKAVRERIARKNQVRIDTKEVKFRPGTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD +VKL++I FL G KVK +++FRGRE+ HQDLG +L ++ ++ +++ EPK Sbjct: 105 THDYEVKLRSIRKFLEGGNKVKCTMRFRGREMAHQDLGLVMLKKVESEVLDLGKVEQEPK 164 Query: 122 FEGRQMIMILSSKCV 136 GRQ+ M+L+ + Sbjct: 165 LLGRQITMMLAPNAL 179 >gi|256960039|ref|ZP_05564210.1| initiation factor 3 [Enterococcus faecalis Merz96] gi|293383792|ref|ZP_06629699.1| translation initiation factor IF-3 [Enterococcus faecalis R712] gi|293388732|ref|ZP_06633225.1| translation initiation factor IF-3 [Enterococcus faecalis S613] gi|312906992|ref|ZP_07765988.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 512] gi|312978750|ref|ZP_07790477.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 516] gi|256950535|gb|EEU67167.1| initiation factor 3 [Enterococcus faecalis Merz96] gi|291078868|gb|EFE16232.1| translation initiation factor IF-3 [Enterococcus faecalis R712] gi|291081889|gb|EFE18852.1| translation initiation factor IF-3 [Enterococcus faecalis S613] gi|310626977|gb|EFQ10260.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 512] gi|311288457|gb|EFQ67013.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 516] Length = 173 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKK+K +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKRKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|226311194|ref|YP_002771088.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] gi|226094142|dbj|BAH42584.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] Length = 173 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLV + + P VC+I+D K +Y K EARK QK +KEV+ I Sbjct: 36 LRIAQEAELDLVNVAPTAKPPVCRIMDYGKFKYEQAKKEKEARKNQKIIELKEVRFSSNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL D KVK +++FRGREI H ++G ++ + + +++ + +P Sbjct: 96 EEHDFQTKLRNVRKFLEDQHKVKCTIRFRGREITHSEIGLGVMERVAAQCEDLAAPERKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 156 KIEGRSMIMILAPKA 170 >gi|323698512|ref|ZP_08110424.1| translation initiation factor IF-3 [Desulfovibrio sp. ND132] gi|323458444|gb|EGB14309.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans ND132] Length = 182 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/130 (44%), Positives = 81/130 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ + P VCKI+D K +Y QK EA+KKQ IKEVK RP D H Sbjct: 50 AREKGLDLVEVAPNADPPVCKIMDYGKFKYQQQKKLQEAKKKQTVIKIKEVKFRPKTDEH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q KLK I FL G + K+++ FRGREI+H+D G +L + ++++++ +P E Sbjct: 110 DYQTKLKNIVKFLEGGDRCKVTIFFRGREIVHKDRGLAVLERVVVDTQDLAKVESKPMAE 169 Query: 124 GRQMIMILSS 133 GR M M+L+ Sbjct: 170 GRTMTMMLAP 179 >gi|315924323|ref|ZP_07920546.1| translation initiation factor IF3 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622394|gb|EFV02352.1| translation initiation factor IF3 [Pseudoramibacter alactolyticus ATCC 23263] Length = 205 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 86/132 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLV++ P VCKILD K RY ++ EA+KKQK+ IKE++M ++ Sbjct: 59 KIADENDLDLVKVSPHAKPPVCKILDYGKFRYEEERRLKEAKKKQKAVSIKEIRMSVRVE 118 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+QVK K + FL G +VK++++FRGRE+ + + G+++L + +R E+ ++ PK Sbjct: 119 EHDIQVKAKNAEKFLMQGHRVKLTIRFRGREMAYTNQGKQVLLDFAKRLEEVGTVEKNPK 178 Query: 122 FEGRQMIMILSS 133 EGR M + L+ Sbjct: 179 LEGRNMSIFLTP 190 >gi|158313564|ref|YP_001506072.1| initiation factor 3 [Frankia sp. EAN1pec] gi|158108969|gb|ABW11166.1| initiation factor 3 [Frankia sp. EAN1pec] Length = 149 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE++LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 1 MRLAQESDLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 61 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 120 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 121 KQDGRNMTMVMAP 133 >gi|326440156|ref|ZP_08214890.1| translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] Length = 192 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|229916378|ref|YP_002885024.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b] gi|229467807|gb|ACQ69579.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b] Length = 176 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLV + P V KI+D K R+ +QK EARK QK +KEV++ P I Sbjct: 40 LRLAEEAELDLVLVADKANPPVAKIMDYGKYRFELQKKEKEARKNQKVIQMKEVRLSPTI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D Q KL+ FL G KVK S++FRGR I H ++G+ +L + +++ ++ +P Sbjct: 100 EDNDFQTKLRNARKFLEKGNKVKASIRFRGRAITHSEIGKRVLDKMAAECADLATVEQKP 159 Query: 121 KFEGRQMIMILS 132 K EGR M ++L+ Sbjct: 160 KMEGRSMFLVLA 171 >gi|225019253|ref|ZP_03708445.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum DSM 5476] gi|224947884|gb|EEG29093.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum DSM 5476] Length = 177 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLV+I TP VC+I++ K ++ K EARK QK +KEV+M I Sbjct: 38 LKLALSKDLDLVKIAPQATPPVCRIMNYGKYKFEQSKREKEARKNQKIVEVKEVRMSLNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G KVK+SV+FRGRE+ H +LG LL K EI +D Sbjct: 98 DTHDFNTKVNQAIKFLKSGDKVKVSVRFRGREMAHTNLGHGLLDRFKTAVEEIGSVDKPS 157 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M +S+K Sbjct: 158 KMEGRSMVMFISAK 171 >gi|1170502|sp|P43814|IF3_HAEIN RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 1/133 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D Sbjct: 38 MAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDE 97 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P K Sbjct: 98 GDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAPGK 157 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 158 LEGRQAVMVLAPK 170 >gi|296394206|ref|YP_003659090.1| translation initiation factor IF-3 [Segniliparus rotundus DSM 44985] gi|296181353|gb|ADG98259.1| translation initiation factor IF-3 [Segniliparus rotundus DSM 44985] Length = 225 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP I Sbjct: 35 LRLAVEADLDLVEVAPEARPPVCKIMDYGKFRYETAQKARESRKHQQNTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 95 DDHDYETKKGHVVRFLDAGAKVKVTIMFRGREQSRPELGHRLLQRLGADVSEHGFVETVP 154 Query: 121 KFEGRQMIMILSS 133 + +GR M MIL+ Sbjct: 155 RLDGRNMTMILAP 167 >gi|291300538|ref|YP_003511816.1| translation initiation factor IF-3 [Stackebrandtia nassauensis DSM 44728] gi|290569758|gb|ADD42723.1| translation initiation factor IF-3 [Stackebrandtia nassauensis DSM 44728] Length = 182 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ + P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPNARPPVCKLMDYGKHKYETALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL+ + E ++ ++ P Sbjct: 89 DDHDYETKKGHVIRFLKAGDKVKITIMFRGREQSRPELGLRLLNKLGEEVSDLGVVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|46198491|ref|YP_004158.1| translation initiation factor IF-3 [Thermus thermophilus HB27] gi|55980520|ref|YP_143817.1| translation initiation factor IF-3 [Thermus thermophilus HB8] gi|46196113|gb|AAS80531.1| bacterial protein translation initiation factor 3 (IF-3) [Thermus thermophilus HB27] gi|55771933|dbj|BAD70374.1| translation initiation factor 3 (IF-3) [Thermus thermophilus HB8] Length = 144 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 7 LRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E +++ ++ +P Sbjct: 67 DEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKP 126 Query: 121 KFEGRQMIMILSS 133 + GR M M+L+ Sbjct: 127 EMLGRDMNMLLAP 139 >gi|297195409|ref|ZP_06912807.1| translation initiation factor IF-3 [Streptomyces pristinaespiralis ATCC 25486] gi|197719221|gb|EDY63129.1| translation initiation factor IF-3 [Streptomyces pristinaespiralis ATCC 25486] Length = 216 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAADVEDLGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|330467000|ref|YP_004404743.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032] gi|328809971|gb|AEB44143.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032] Length = 220 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITELGYVESAP 148 Query: 121 KFEGRQMIMILS 132 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLA 160 >gi|68249987|ref|YP_249099.1| translation initiation factor IF-3 [Haemophilus influenzae 86-028NP] gi|145629397|ref|ZP_01785195.1| translation initiation factor IF-3 [Haemophilus influenzae 22.1-21] gi|145630795|ref|ZP_01786573.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|145636198|ref|ZP_01791868.1| translation initiation factor IF-3 [Haemophilus influenzae PittHH] gi|145638897|ref|ZP_01794505.1| translation initiation factor IF-3 [Haemophilus influenzae PittII] gi|145641654|ref|ZP_01797231.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|148826025|ref|YP_001290778.1| translation initiation factor IF-3 [Haemophilus influenzae PittEE] gi|229847477|ref|ZP_04467574.1| translation initiation factor IF-3 [Haemophilus influenzae 7P49H1] gi|260581335|ref|ZP_05849151.1| translation initiation factor IF-3 [Haemophilus influenzae RdAW] gi|260582457|ref|ZP_05850248.1| translation initiation factor IF-3 [Haemophilus influenzae NT127] gi|319776260|ref|YP_004138748.1| translation initiation factor IF-3 [Haemophilus influenzae F3047] gi|319897110|ref|YP_004135305.1| translation initiation factor if-3 [Haemophilus influenzae F3031] gi|329123400|ref|ZP_08251964.1| translation initiation factor IF3 [Haemophilus aegyptius ATCC 11116] gi|1574778|gb|AAC22963.1| translation initiation factor 3 (infC) [Haemophilus influenzae Rd KW20] gi|68058186|gb|AAX88439.1| translation initiation factor IF-3 [Haemophilus influenzae 86-028NP] gi|144978240|gb|EDJ88004.1| translation initiation factor IF-3 [Haemophilus influenzae 22.1-21] gi|144983677|gb|EDJ91137.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|145270720|gb|EDK10653.1| translation initiation factor IF-3 [Haemophilus influenzae PittHH] gi|145271869|gb|EDK11778.1| translation initiation factor IF-3 [Haemophilus influenzae PittII] gi|145273701|gb|EDK13570.1| translation initiation factor IF-3 [Haemophilus influenzae 22.4-21] gi|148716185|gb|ABQ98395.1| translation initiation factor IF-3 [Haemophilus influenzae PittEE] gi|229809618|gb|EEP45345.1| translation initiation factor IF-3 [Haemophilus influenzae 7P49H1] gi|260092002|gb|EEW75949.1| translation initiation factor IF-3 [Haemophilus influenzae RdAW] gi|260094437|gb|EEW78334.1| translation initiation factor IF-3 [Haemophilus influenzae NT127] gi|301170066|emb|CBW29670.1| translation initiation factor IF-3 [Haemophilus influenzae 10810] gi|317432614|emb|CBY80975.1| translation initiation factor IF-3 [Haemophilus influenzae F3031] gi|317450851|emb|CBY87075.1| translation initiation factor IF-3 [Haemophilus influenzae F3047] gi|327470982|gb|EGF16437.1| translation initiation factor IF3 [Haemophilus aegyptius ATCC 11116] Length = 135 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 1/133 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D Sbjct: 1 MAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P K Sbjct: 61 GDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAPGK 120 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 121 LEGRQAVMVLAPK 133 >gi|116050733|ref|YP_790446.1| translation initiation factor IF-3 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891077|ref|YP_002439943.1| translation initiation factor IF-3 [Pseudomonas aeruginosa LESB58] gi|254235721|ref|ZP_04929044.1| translation initiation factor IF-3 [Pseudomonas aeruginosa C3719] gi|296388794|ref|ZP_06878269.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PAb1] gi|115585954|gb|ABJ11969.1| translation initiation factor IF-3 [Pseudomonas aeruginosa UCBPP-PA14] gi|126167652|gb|EAZ53163.1| translation initiation factor IF-3 [Pseudomonas aeruginosa C3719] gi|218771302|emb|CAW27067.1| translation initiation factor IF-3 [Pseudomonas aeruginosa LESB58] Length = 177 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 41 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPK 174 >gi|291544306|emb|CBL17415.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus sp. 18P13] Length = 189 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 80/134 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLV+I TP VC+I+D K + K EARK QK IKE++M ID Sbjct: 54 KIAYDKNLDLVKIAPQATPPVCRIMDYGKFCFEQAKREKEARKNQKVVEIKEIRMFSAID 113 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+ FL+ G K+K+SV+FR R I H LG ELL+ +E G+I+ +D K Sbjct: 114 THDFNTKVNQAIKFLQSGDKLKVSVRFRKRAIAHPHLGEELLARFREACGDIAVVDKPAK 173 Query: 122 FEGRQMIMILSSKC 135 EGR ++M +S K Sbjct: 174 MEGRSIVMFMSPKA 187 >gi|15639836|ref|NP_219286.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026074|ref|YP_001933846.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum SS14] gi|6016326|sp|O83822|IF3_TREPA RecName: Full=Translation initiation factor IF-3 gi|238689348|sp|B2S488|IF3_TREPS RecName: Full=Translation initiation factor IF-3 gi|3323163|gb|AAC65816.1| translation initiation factor 3 (infC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018649|gb|ACD71267.1| translation initiation factor 3 [Treponema pallidum subsp. pallidum SS14] gi|291060208|gb|ADD72943.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum str. Chicago] Length = 179 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ NLDLVE+ +P VCKILD K R+ + K +++K+Q+ +KEV+M+P I Sbjct: 43 LRMARDINLDLVEVAPQASPPVCKILDYGKYRFEMGKKLRDSKKRQRLQTLKEVRMQPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ K K I FL +G KVK++++FRGRE+ H DLG +L N+ R ++ + Sbjct: 103 NDHDMAFKAKHIQRFLDEGDKVKVTIRFRGRELAHTDLGFNVLQNVLGRLVCGYSVEKQA 162 Query: 121 KFEGRQMIMILSSK 134 EGR M M L+ K Sbjct: 163 AMEGRSMSMTLTPK 176 >gi|238855712|ref|ZP_04646008.1| translation initiation factor IF-3 [Lactobacillus jensenii 269-3] gi|260665498|ref|ZP_05866345.1| translation initiation factor IF-3 [Lactobacillus jensenii SJ-7A-US] gi|282934765|ref|ZP_06340005.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|313471818|ref|ZP_07812310.1| translation initiation factor IF-3 [Lactobacillus jensenii 1153] gi|238831658|gb|EEQ23999.1| translation initiation factor IF-3 [Lactobacillus jensenii 269-3] gi|239528572|gb|EEQ67573.1| translation initiation factor IF-3 [Lactobacillus jensenii 1153] gi|260560766|gb|EEX26743.1| translation initiation factor IF-3 [Lactobacillus jensenii SJ-7A-US] gi|281301176|gb|EFA93480.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] Length = 158 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A+LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 18 LNQAADADLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KL + FL ++G KV++S++FRGR I H +LG E+L + E +I+ + + Sbjct: 78 EGNDFDTKLNHVRKFLSKEGAKVRVSIRFRGRAITHTELGLEVLEKMAEATKDIANVTAK 137 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 138 PKMEGRSMFLMLAPKS 153 >gi|332686210|ref|YP_004455984.1| translation initiation factor 3 [Melissococcus plutonius ATCC 35311] gi|332370219|dbj|BAK21175.1| translation initiation factor 3 [Melissococcus plutonius ATCC 35311] Length = 173 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ ANLDLV + P V +I+D K + QK EARKKQK +KEV++ P I Sbjct: 37 LKQAEAANLDLVLVAPGAKPPVARIMDYGKFHFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+E+L + + +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQEVLDRLAKETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + LS K Sbjct: 157 KMDGRSMFLTLSPK 170 >gi|317507013|ref|ZP_07964780.1| translation initiation factor IF-3 [Segniliparus rugosus ATCC BAA-974] gi|316254697|gb|EFV14000.1| translation initiation factor IF-3 [Segniliparus rugosus ATCC BAA-974] Length = 224 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP I Sbjct: 45 LRLAIEADLDLVEVAPDARPPVCKIMDYGKFRYEAAQKARESRKHQQNTVIKEQKLRPKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 105 DDHDYETKKGHVVRFLDSGAKVKVTIMFRGREQSRPELGHRLLQRLGADVSEHGFVETVP 164 Query: 121 KFEGRQMIMILS 132 + +GR M MIL+ Sbjct: 165 RLDGRNMTMILA 176 >gi|313107812|ref|ZP_07793986.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 39016] gi|310880488|gb|EFQ39082.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 39016] Length = 154 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 18 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 78 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 138 KLEGRQLMMVIAPK 151 >gi|294811660|ref|ZP_06770303.1| Translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] gi|294324259|gb|EFG05902.1| Translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] Length = 230 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 58 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 118 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 177 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 178 KQDGRNMIMVLGP 190 >gi|225028457|ref|ZP_03717649.1| hypothetical protein EUBHAL_02731 [Eubacterium hallii DSM 3353] gi|224954207|gb|EEG35416.1| hypothetical protein EUBHAL_02731 [Eubacterium hallii DSM 3353] Length = 164 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAREAELDLVKIAPNAKPPVCKIIDYGKYRYELARKEKEAKKKQKTIDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ FL G KVK++++FRGRE+ H + + +L E+ +++ +D +P Sbjct: 90 DKNDLNTKINQARKFLSKGDKVKVTLRFRGRELAHVNSSKVILEEFAEQLSDVAVVDKQP 149 Query: 121 KFEGRQMIMILSSK 134 KFEGR MIM L+ K Sbjct: 150 KFEGRSMIMFLTEK 163 >gi|157145990|ref|YP_001453309.1| translation initiation factor IF-3 [Citrobacter koseri ATCC BAA-895] gi|157083195|gb|ABV12873.1| hypothetical protein CKO_01744 [Citrobacter koseri ATCC BAA-895] Length = 144 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLAELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|15597939|ref|NP_251433.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PAO1] gi|254241196|ref|ZP_04934518.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 2192] gi|14194831|sp|Q9I0A0|IF3_PSEAE RecName: Full=Translation initiation factor IF-3 gi|9948821|gb|AAG06131.1|AE004702_8 translation initiation factor IF-3 [Pseudomonas aeruginosa PAO1] gi|126194574|gb|EAZ58637.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 2192] Length = 183 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 47 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 167 KLEGRQLMMVIAPK 180 >gi|163845977|ref|YP_001634021.1| translation initiation factor IF-3 [Chloroflexus aurantiacus J-10-fl] gi|222523703|ref|YP_002568173.1| translation initiation factor IF-3 [Chloroflexus sp. Y-400-fl] gi|163667266|gb|ABY33632.1| translation initiation factor IF-3 [Chloroflexus aurantiacus J-10-fl] gi|222447582|gb|ACM51848.1| translation initiation factor IF-3 [Chloroflexus sp. Y-400-fl] Length = 275 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E DLVE+ + P VC++LD K RY K EAR+ QK + +K++++ P Sbjct: 49 LAMAEERGFDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARRNQKQSELKQIRLMPKT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+ VK FL G KVK +++FRGRE+ H ++GR++L I E+ +I+ I+ +P Sbjct: 109 DDHDVAVKANQARRFLLAGDKVKFNLRFRGREMAHPEIGRQMLDQIAEQLSDIAVIEQKP 168 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+L+ Sbjct: 169 LMEGRVLSMLLAPTA 183 >gi|309805195|ref|ZP_07699247.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 09V1-c] gi|308165429|gb|EFO67660.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 09V1-c] Length = 135 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 77/124 (62%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + P V +I++ K R+ QK E RK QK T +KE+++ P I+ +D K Sbjct: 1 MDLVLISPNAKPPVARIMNYGKYRFEQQKKEKENRKNQKVTAVKEIRLSPTIEGNDFDTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LK + FL G KV++S++FRGR I H +LG+E+L + E+ ++S + P EGR M Sbjct: 61 LKHVRNFLAKGAKVRVSIRFRGRAITHNELGKEVLEKMAEQAKDLSSVTASPTMEGRSMF 120 Query: 129 MILS 132 +ILS Sbjct: 121 LILS 124 >gi|20138516|sp|Q9ACJ8|IF3_THET2 RecName: Full=Translation initiation factor IF-3 gi|75520532|sp|Q70YI5|IF3_THETH RecName: Full=Translation initiation factor IF-3 gi|134048675|sp|Q5SKU2|IF3_THET8 RecName: Full=Translation initiation factor IF-3 gi|13508846|emb|CAC35168.1| translation initiation factor-3 (IF3) [Thermus thermophilus HB27] gi|21901946|emb|CAD42331.1| translation initiation factor 3 [Thermus thermophilus] Length = 171 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 34 LRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E +++ ++ +P Sbjct: 94 DEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKP 153 Query: 121 KFEGRQMIMILSS 133 + GR M M+L+ Sbjct: 154 EMLGRDMNMLLAP 166 >gi|268608873|ref|ZP_06142600.1| translation initiation factor IF-3 [Ruminococcus flavefaciens FD-1] Length = 174 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA + +LDLV+I TP VC+I+D K + QK EARK QK IKE++M ID Sbjct: 39 QMAYDKDLDLVKIAPQATPPVCRIMDYGKYCFEQQKREKEARKNQKVVAIKEIRMFSTID 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+ FL+ G K+K+SV+FR R I H LG ELL KE + +D K Sbjct: 99 THDFETKVNQAVKFLQGGDKLKVSVRFRKRAIAHPQLGEELLERFKEAVSAVGTVDKPAK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR ++M + K Sbjct: 159 MEGRSIVMFVVPKAA 173 >gi|259500520|ref|ZP_05743422.1| initiation factor IF3 [Lactobacillus iners DSM 13335] gi|302191210|ref|ZP_07267464.1| translation initiation factor IF-3 [Lactobacillus iners AB-1] gi|309803158|ref|ZP_07697255.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 11V1-d] gi|309807122|ref|ZP_07701099.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 03V1-b] gi|309808034|ref|ZP_07701953.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 01V1-a] gi|309810188|ref|ZP_07704033.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 2503V10-D] gi|312871792|ref|ZP_07731880.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 3008A-a] gi|312873026|ref|ZP_07733086.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2062A-h1] gi|312874179|ref|ZP_07734213.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2052A-d] gi|312875675|ref|ZP_07735676.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2053A-b] gi|315653645|ref|ZP_07906565.1| translation initiation factor IF3 [Lactobacillus iners ATCC 55195] gi|325912167|ref|ZP_08174565.1| translation initiation factor IF-3 [Lactobacillus iners UPII 143-D] gi|325912704|ref|ZP_08175087.1| translation initiation factor IF-3 [Lactobacillus iners UPII 60-B] gi|329920067|ref|ZP_08276898.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 1401G] gi|259167904|gb|EEW52399.1| initiation factor IF3 [Lactobacillus iners DSM 13335] gi|308164666|gb|EFO66916.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 11V1-d] gi|308166473|gb|EFO68675.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 03V1-b] gi|308168717|gb|EFO70816.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 01V1-a] gi|308169460|gb|EFO71508.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 2503V10-D] gi|311088929|gb|EFQ47372.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2053A-b] gi|311090249|gb|EFQ48659.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2052A-d] gi|311091548|gb|EFQ49932.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2062A-h1] gi|311092734|gb|EFQ51090.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 3008A-a] gi|315489007|gb|EFU78649.1| translation initiation factor IF3 [Lactobacillus iners ATCC 55195] gi|325476117|gb|EGC79285.1| translation initiation factor IF-3 [Lactobacillus iners UPII 143-D] gi|325478125|gb|EGC81254.1| translation initiation factor IF-3 [Lactobacillus iners UPII 60-B] gi|328936521|gb|EGG32965.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 1401G] Length = 134 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 77/124 (62%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + P V +I++ K R+ QK E RK QK T +KE+++ P I+ +D K Sbjct: 1 MDLVLISPNAKPPVARIMNYGKYRFEQQKKEKENRKNQKVTAVKEIRLSPTIEGNDFDTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LK + FL G KV++S++FRGR I H +LG+E+L + E+ ++S + P EGR M Sbjct: 61 LKHVRNFLAKGAKVRVSIRFRGRAITHNELGKEVLEKMAEQAKDLSSVTASPTMEGRSMF 120 Query: 129 MILS 132 +ILS Sbjct: 121 LILS 124 >gi|49089216|gb|AAT51657.1| PA2743 [synthetic construct] Length = 184 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 47 IRLAEEAKLDLVEIPADAVPPVCRIMDYGKHLFEKKKLAAVAKKNQKQAQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 167 KLEGRQLMMVIAPK 180 >gi|304320891|ref|YP_003854534.1| translation initiation factor [Parvularcula bermudensis HTCC2503] gi|303299793|gb|ADM09392.1| translation initiation factor [Parvularcula bermudensis HTCC2503] Length = 174 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA LDLVE+ S VCK++D K +Y QK EA+KKQK IKE+KMRP I Sbjct: 41 LGLATEAKLDLVEVASGNDTPVCKLMDYGKFKYQQQKKKAEAKKKQKVVEIKEIKMRPNI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F +G KVK++++FRGRE+ HQ+ G ELL+ ++E F ++++ P Sbjct: 101 DKHDYEVKTKAMRRFFDEGDKVKVTLRFRGREMAHQERGMELLNRVREDFEGTTKVEAMP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 161 KLEGRQMMMVLAPR 174 >gi|261867956|ref|YP_003255878.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293392218|ref|ZP_06636552.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413288|gb|ACX82659.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290952752|gb|EFE02871.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 159 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LEMAENAALDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K K++V+FRGRE+ HQD+G ++L +K EI+ ++ P Sbjct: 83 DEGDYQVKLRSLVRFLEDGDKAKVTVRFRGREMAHQDIGLDVLERVKNDLAEIAVVESAP 142 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPK 157 >gi|90994422|ref|YP_536912.1| translation initiation factor 3 [Porphyra yezoensis] gi|115502191|sp|Q1XDQ6|IF3C_PORYE RecName: Full=Translation initiation factor IF-3, chloroplastic gi|90818986|dbj|BAE92355.1| initiation factor 3 [Porphyra yezoensis] Length = 182 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + LDLV + P VC+ILD K ++T +K A EA+KKQ ++ IKEVKMR I Sbjct: 46 IQLAVQQGLDLVVVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQHNSSIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +V++ F++ G KVK ++ FRGREI H +L +LL+ + I+ I P Sbjct: 106 EEHDYKVRINQASKFIQAGDKVKATITFRGREIQHSNLAIDLLNKMASDLNAIAEIQQAP 165 Query: 121 KFEGRQMIMILSSKCV 136 +GR +IM+LS K V Sbjct: 166 SRDGRNVIMLLSPKKV 181 >gi|11465697|ref|NP_053841.1| translation initiation factor 3 [Porphyra purpurea] gi|1708415|sp|P51231|IF3C_PORPU RecName: Full=Translation initiation factor IF-3, chloroplastic gi|1276697|gb|AAC08117.1| initiation factor 3 [Porphyra purpurea] Length = 182 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/136 (43%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + LDLV + P VC+ILD K ++T +K A EA+KKQ ++ IKEVKMR I Sbjct: 46 IQLATKQGLDLVLVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQHNSSIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +V++ FL+ G KVK ++ FRGREI H +L LL+ + I+ I P Sbjct: 106 EEHDYKVRINQASKFLQSGDKVKATITFRGREIQHSNLAINLLNKMAADLVTIAEIQQAP 165 Query: 121 KFEGRQMIMILSSKCV 136 +GR +IM+LS K V Sbjct: 166 SRDGRNVIMLLSPKKV 181 >gi|297626570|ref|YP_003688333.1| Translation initiation factor IF-3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922335|emb|CBL56907.1| Translation initiation factor IF-3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 237 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P VCK++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 43 LQLAREHDLDLVEVAPGARPPVCKLMDYGKFKYENAQKARESRRNQSNTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E + ++ P Sbjct: 103 DGHDYETKKGHVVRFLRGGDKVKITIMFRGREQSRPELGFNLLRRLAEDVSDDGVVEQSP 162 Query: 121 KFEGRQMIMILSS 133 K EGR M M+LS Sbjct: 163 KQEGRNMHMVLSP 175 >gi|28869576|ref|NP_792195.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato str. DC3000] gi|66045403|ref|YP_235244.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae B728a] gi|213970494|ref|ZP_03398621.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato T1] gi|301384175|ref|ZP_07232593.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato Max13] gi|302062685|ref|ZP_07254226.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato K40] gi|302132642|ref|ZP_07258632.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302187614|ref|ZP_07264287.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae 642] gi|28852818|gb|AAO55890.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato str. DC3000] gi|63256110|gb|AAY37206.1| Initiation factor 3 [Pseudomonas syringae pv. syringae B728a] gi|213924665|gb|EEB58233.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato T1] gi|330876790|gb|EGH10939.1| translation initiation factor IF-3 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330951867|gb|EGH52127.1| translation initiation factor IF-3 [Pseudomonas syringae Cit 7] gi|330958897|gb|EGH59157.1| translation initiation factor IF-3 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330967297|gb|EGH67557.1| translation initiation factor IF-3 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330973950|gb|EGH74016.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aceris str. M302273PT] gi|331016138|gb|EGH96194.1| translation initiation factor IF-3 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 177 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPK 174 >gi|145589015|ref|YP_001155612.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047421|gb|ABP34048.1| bacterial translation initiation factor 3 (bIF-3) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 169 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P V +I+D K +Y K EA+ KQK +KEVK RP Sbjct: 32 LALAEEKETDLVEIAPTAVPPVVRIMDFGKFKYQEAKRMHEAKLKQKVIQVKEVKFRPGT 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 92 DDGDYGVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGVRMLERLKLDLVEYGQVEQFP 151 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 152 KMEGRQMVMVLAP 164 >gi|60392427|sp|P0A132|IF3_PSESM RecName: Full=Translation initiation factor IF-3 gi|60392428|sp|P0A133|IF3_PSESY RecName: Full=Translation initiation factor IF-3 gi|1171432|gb|AAB05014.1| initiation factor IF3 [Pseudomonas syringae pv. syringae] Length = 183 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPK 180 >gi|89101226|ref|ZP_01174052.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911] gi|89084055|gb|EAR63230.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911] Length = 146 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLD+V + + P V +I+D K ++ QK EARK QK IKEV++ P I Sbjct: 10 LEIATRVNLDVVLVAPNAKPPVARIMDYGKFKFEQQKKEKEARKNQKIINIKEVRLSPTI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ P Sbjct: 70 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLVRFAEACKEVAAVESHP 129 Query: 121 KFEGRQMIMILSSK 134 K +GR M M+L+ K Sbjct: 130 KMDGRSMFMVLAPK 143 >gi|138896279|ref|YP_001126732.1| translation initiation factor IF3 [Geobacillus thermodenitrificans NG80-2] gi|134267792|gb|ABO67987.1| Translation initiation factor IF3 [Geobacillus thermodenitrificans NG80-2] Length = 130 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV + + P VC+I+D K R+ QK EARKKQK IKEV++ P I+ HD K Sbjct: 1 MDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINIKEVRLSPTIEEHDFNTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ PK EGR M Sbjct: 61 LRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAPKLEGRNMF 120 Query: 129 MILSSK 134 ++L+ K Sbjct: 121 LVLAPK 126 >gi|54113443|gb|AAV29355.1| NT02FT0733 [synthetic construct] Length = 155 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 20 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSK 134 K EGRQMI +L K Sbjct: 140 KLEGRQMIKVLGPK 153 >gi|58337803|ref|YP_194388.1| translational initiation factor IF3 [Lactobacillus acidophilus NCFM] gi|227904452|ref|ZP_04022257.1| translational initiation factor IF3 [Lactobacillus acidophilus ATCC 4796] gi|58255120|gb|AAV43357.1| translational initiation factor IF3 [Lactobacillus acidophilus NCFM] gi|227867827|gb|EEJ75248.1| translational initiation factor IF3 [Lactobacillus acidophilus ATCC 4796] Length = 150 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I+ + Sbjct: 11 ASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTIEGN 70 Query: 64 DLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + +PK Sbjct: 71 DFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKM 130 Query: 123 EGRQMIMILS 132 EGR M ++L+ Sbjct: 131 EGRSMFLMLA 140 >gi|226227284|ref|YP_002761390.1| translation initiation factor IF-3 [Gemmatimonas aurantiaca T-27] gi|226090475|dbj|BAH38920.1| translation initiation factor IF-3 [Gemmatimonas aurantiaca T-27] Length = 186 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVE+ ++ P V +I+D K ++ K A A+KKQ +KEVK RP I Sbjct: 53 LSMAVELGLDLVEVAAAARPPVVRIMDYGKFKFEQAKQARLAKKKQHVIHLKEVKYRPGI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL +G KVK+++ FRGR+I H +LG+ ++ + + ++++I+ P Sbjct: 113 DDHDFETKTRHARRFLEEGNKVKVTLMFRGRQIAHPELGKIVVERVSQELADLAKIESAP 172 Query: 121 KFEGRQMIMILSSK 134 EG+ M MIL+ K Sbjct: 173 TMEGKSMTMILAPK 186 >gi|39931265|sp|Q83C11|IF3_COXBU RecName: Full=Translation initiation factor IF-3 Length = 185 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+I++ K ++ K +KKQ+ +KEVK RP Sbjct: 36 LTMAEEAGLDLVEISPTAKPPVCRIMNFGKYQFEQSKRKAAQKKKQRLVHLKEVKFRPGT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ I FL G KVK+S++FRGRE+ H++LG ELL +K G I ++ EP Sbjct: 96 DVGDYQVKLRKIATFLDRGDKVKVSLRFRGREMQHRELGLELLGRVKRDLGNIV-VEQEP 154 Query: 121 KFEGRQMIMIL 131 + EGRQM M++ Sbjct: 155 RLEGRQMTMVV 165 >gi|29654623|ref|NP_820315.1| translation initiation factor IF-3 [Coxiella burnetii RSA 493] gi|153207432|ref|ZP_01946132.1| translation initiation factor IF-3 [Coxiella burnetii 'MSU Goat Q177'] gi|154705918|ref|YP_001424762.1| translation initiation factor IF-3 [Coxiella burnetii Dugway 5J108-111] gi|161830327|ref|YP_001597174.1| translation initiation factor IF-3 [Coxiella burnetii RSA 331] gi|212212293|ref|YP_002303229.1| translation initiation factor IF-3 [Coxiella burnetii CbuG_Q212] gi|212218738|ref|YP_002305525.1| translation initiation factor IF-3 [Coxiella burnetii CbuK_Q154] gi|29541891|gb|AAO90829.1| bacterial protein translation initiation factor 3 (IF-3) [Coxiella burnetii RSA 493] gi|120576563|gb|EAX33187.1| translation initiation factor IF-3 [Coxiella burnetii 'MSU Goat Q177'] gi|154355204|gb|ABS76666.1| bacterial protein translation initiation factor 3 (IF-3) [Coxiella burnetii Dugway 5J108-111] gi|161762194|gb|ABX77836.1| translation initiation factor IF-3 [Coxiella burnetii RSA 331] gi|212010703|gb|ACJ18084.1| bacterial protein translation initiation factor 3 [Coxiella burnetii CbuG_Q212] gi|212013000|gb|ACJ20380.1| bacterial protein translation initiation factor 3 [Coxiella burnetii CbuK_Q154] Length = 169 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+I++ K ++ K +KKQ+ +KEVK RP Sbjct: 20 LTMAEEAGLDLVEISPTAKPPVCRIMNFGKYQFEQSKRKAAQKKKQRLVHLKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ I FL G KVK+S++FRGRE+ H++LG ELL +K G I ++ EP Sbjct: 80 DVGDYQVKLRKIATFLDRGDKVKVSLRFRGREMQHRELGLELLGRVKRDLGNIV-VEQEP 138 Query: 121 KFEGRQMIMIL 131 + EGRQM M++ Sbjct: 139 RLEGRQMTMVV 149 >gi|89900131|ref|YP_522602.1| translation initiation factor IF-3 [Rhodoferax ferrireducens T118] gi|89344868|gb|ABD69071.1| bacterial translation initiation factor 3 (bIF-3) [Rhodoferax ferrireducens T118] Length = 171 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKE+K RP Sbjct: 24 LRMAGDLDVDLVEISATAVPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQDLG LL+ I+ G++ I+ P Sbjct: 84 DEGDYNIKMRNIKRFLAEGDKCKITLRFRGREITHQDLGMALLNRIRTELGDLILIEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|297182199|gb|ADI18370.1| translation initiation factor 3 (if-3) [uncultured actinobacterium HF4000_04C13] Length = 230 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 75/124 (60%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ P VC+I+D K +Y + A E+RKK +KE+K RP I D Sbjct: 2 GLDLVEVADKADPPVCRIMDYGKFKYEQSQRAKESRKKATHVLVKEMKYRPKIGPGDFDT 61 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K + ++ FL DG KVK+++ FRGRE+ H +LGR +L + E + R++ PK +GR M Sbjct: 62 KTRKVEQFLGDGSKVKVTIMFRGREMQHPELGRRILDRVAETVDHVGRVEVFPKQDGRNM 121 Query: 128 IMIL 131 IM+L Sbjct: 122 IMVL 125 >gi|331697626|ref|YP_004333865.1| translation initiation factor IF-3 [Pseudonocardia dioxanivorans CB1190] gi|326952315|gb|AEA26012.1| Translation initiation factor IF-3 [Pseudonocardia dioxanivorans CB1190] Length = 250 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 83 LRLAQEAELDLVEVAAQARPPVCKLMDFGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + E ++ ++ P Sbjct: 143 DTHDYETKKRNVVRFLEGGNKVKVTIMFRGREQSRPELGFRLLQRLAEDVVDLGVVEAAP 202 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 203 KQDGRNMTMVIAP 215 >gi|148264671|ref|YP_001231377.1| translation initiation factor IF-3 [Geobacter uraniireducens Rf4] gi|146398171|gb|ABQ26804.1| bacterial translation initiation factor 3 (bIF-3) [Geobacter uraniireducens Rf4] Length = 138 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 1 MALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKQQEAKKKQVQVQLKEVKLRPKT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + FL +G K K++V FRGREI H DLG+ L +I+ I+ + Sbjct: 61 DEHDLQFKIKHVRRFLEEGNKAKVTVVFRGREITHMDLGQSALDKFAAELQDIALIEVKQ 120 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 121 KMEGRSMFMIVAPKT 135 >gi|315038856|ref|YP_004032424.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1112] gi|312276989|gb|ADQ59629.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1112] Length = 147 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFVSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAESTSDIANVISK 126 Query: 120 PKFEGRQMIMILSSKC 135 P EGR M ++L+ K Sbjct: 127 PTMEGRSMFLMLAPKS 142 >gi|319763196|ref|YP_004127133.1| translation initiation factor if-3 [Alicycliphilus denitrificans BC] gi|317117757|gb|ADV00246.1| translation initiation factor IF-3 [Alicycliphilus denitrificans BC] Length = 174 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIDIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG KVK++++FRGREI HQ+LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLADGDKVKVTLRFRGREITHQELGLALLNRLRDELADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|330443795|ref|YP_004376781.1| translation initiation factor IF-3 [Chlamydophila pecorum E58] gi|328806905|gb|AEB41078.1| translation initiation factor IF-3 [Chlamydophila pecorum E58] Length = 175 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ TP VCK++D K RY I K +++K Q +KEVK++P I Sbjct: 35 LDLAREAGLDLVEVSSNSTPPVCKVMDYGKYRYDITKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G ++ I + ++ ++ EP Sbjct: 95 DENDFLTKLKQARGFIEKGNKVKITCTFRGRELAYPEHGLRVIKKISQGLEDVGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR + +++ V Sbjct: 155 KLAGRSLTCVVAPGIV 170 >gi|302866848|ref|YP_003835485.1| translation initiation factor IF-3 [Micromonospora aurantiaca ATCC 27029] gi|315503263|ref|YP_004082150.1| translation initiation factor if-3 [Micromonospora sp. L5] gi|302569707|gb|ADL45909.1| translation initiation factor IF-3 [Micromonospora aurantiaca ATCC 27029] gi|315409882|gb|ADU07999.1| translation initiation factor IF-3 [Micromonospora sp. L5] Length = 215 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ ++ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITDLGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|124516422|gb|EAY57930.1| translation initiation factor 3 (IF-3) [Leptospirillum rubarum] Length = 175 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 77/133 (57%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E DLVE+ + P VCK++D K Y K ++ QKS IKEVK RP I+ H Sbjct: 21 AEEQGFDLVEVSPTAKPPVCKMMDFGKYMYEQSKKVHAMKQHQKSGQIKEVKFRPHINEH 80 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ + FL DG K KIS+ FRGRE++H ++G+ELL I ++ ++ P+ E Sbjct: 81 DLETKINYVQRFLEDGNKAKISMMFRGREMIHTEVGKELLQKIIVATEGVAVLEVPPRME 140 Query: 124 GRQMIMILSSKCV 136 G M M L+ Sbjct: 141 GSNMTMTLAPATT 153 >gi|325578417|ref|ZP_08148552.1| translation initiation factor IF3 [Haemophilus parainfluenzae ATCC 33392] gi|301156312|emb|CBW15783.1| protein chain initiation factor IF-3 [Haemophilus parainfluenzae T3T1] gi|325160153|gb|EGC72282.1| translation initiation factor IF3 [Haemophilus parainfluenzae ATCC 33392] Length = 154 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 18 LDMAEQAALDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P Sbjct: 78 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLADISVVESAP 137 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 138 GKLEGRQAVMVLAPK 152 >gi|206603263|gb|EDZ39743.1| Translation initiation factor 3 (IF-3) [Leptospirillum sp. Group II '5-way CG'] Length = 175 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 77/133 (57%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E DLVE+ + P VCK++D K Y K ++ QKS IKEVK RP I+ H Sbjct: 21 AEEQGFDLVEVSPTAKPPVCKMMDFGKYMYEQSKKVHAMKQHQKSGQIKEVKFRPHINEH 80 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ + FL DG K KIS+ FRGRE++H ++G+ELL I ++ ++ P+ E Sbjct: 81 DLETKINYVQRFLEDGNKAKISMMFRGREMIHTEVGKELLQKIIVATEGVAVLEVPPRME 140 Query: 124 GRQMIMILSSKCV 136 G M M L+ Sbjct: 141 GSNMTMTLAPATT 153 >gi|71736314|ref|YP_274355.1| translation initiation factor IF-3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|237801014|ref|ZP_04589475.1| translation initiation factor IF-3 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257486171|ref|ZP_05640212.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623635|ref|ZP_06456589.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647147|ref|ZP_06478490.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. 2250] gi|289673299|ref|ZP_06494189.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae FF5] gi|298486702|ref|ZP_07004759.1| Translation initiation factor 3 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556867|gb|AAZ36078.1| translation initiation factor IF-3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158785|gb|EFH99848.1| Translation initiation factor 3 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324303|gb|EFW80382.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. B076] gi|320328575|gb|EFW84577.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867696|gb|EGH02405.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330885567|gb|EGH19716.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888317|gb|EGH20978.1| translation initiation factor IF-3 [Pseudomonas syringae pv. mori str. 301020] gi|330898078|gb|EGH29497.1| translation initiation factor IF-3 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943372|gb|EGH45741.1| translation initiation factor IF-3 [Pseudomonas syringae pv. pisi str. 1704B] gi|330977710|gb|EGH77613.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330989240|gb|EGH87343.1| translation initiation factor IF-3 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010501|gb|EGH90557.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331023871|gb|EGI03928.1| translation initiation factor IF-3 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 177 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADALPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPK 174 >gi|170768694|ref|ZP_02903147.1| translation initiation factor IF-3 [Escherichia albertii TW07627] gi|170122242|gb|EDS91173.1| translation initiation factor IF-3 [Escherichia albertii TW07627] Length = 144 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|330825390|ref|YP_004388693.1| translation initiation factor IF-3 [Alicycliphilus denitrificans K601] gi|329310762|gb|AEB85177.1| Translation initiation factor IF-3 [Alicycliphilus denitrificans K601] Length = 199 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIDIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG KVK++++FRGREI HQ+LG LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKVKVTLRFRGREITHQELGLALLNRLRDELADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 169 KLEGRQMIMMIAP 181 >gi|253996954|ref|YP_003049018.1| translation initiation factor IF-3 [Methylotenera mobilis JLW8] gi|253983633|gb|ACT48491.1| translation initiation factor IF-3 [Methylotenera mobilis JLW8] Length = 155 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLVEI + P VC+++D K +Y K E + KQK +KE+K RP D D + Sbjct: 25 DIDLVEIAPNAAPPVCRLMDYGKFKYAESKRQHEVKLKQKQVVVKEIKFRPGTDDGDYNI 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K++ I F++DG K KI+++FRGREI HQ+ G LL ++ E + ++ PK EGRQM Sbjct: 85 KVRNITRFIQDGDKAKITLRFRGREITHQEFGMALLKRVEADLKEYAVVEQYPKMEGRQM 144 Query: 128 IMILSS 133 +M+L Sbjct: 145 VMVLGP 150 >gi|206575853|ref|YP_002237975.1| translation initiation factor IF-3 [Klebsiella pneumoniae 342] gi|290509027|ref|ZP_06548398.1| translation initiation factor IF-3 [Klebsiella sp. 1_1_55] gi|206564911|gb|ACI06687.1| translation initiation factor IF-3 [Klebsiella pneumoniae 342] gi|289778421|gb|EFD86418.1| translation initiation factor IF-3 [Klebsiella sp. 1_1_55] Length = 155 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 18 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 78 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLTRVRDDLSELAVVESFP 137 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 138 TKIEGRQMIMVLAPK 152 >gi|303325498|ref|ZP_07355941.1| translation initiation factor IF-3 [Desulfovibrio sp. 3_1_syn3] gi|302863414|gb|EFL86345.1| translation initiation factor IF-3 [Desulfovibrio sp. 3_1_syn3] Length = 176 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 87/132 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP D Sbjct: 44 LAKEGGMDLVEVASTSEPPVCRIMDYGKFKYEQQKKKAEAKKRQTVVQIKEIKVRPKTDD 103 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + KL+ I FL DG + KI+V FRGREI+H+D G +L + + +++++D EP+ Sbjct: 104 HDYETKLRHIRRFLEDGDRCKITVFFRGREIVHKDRGLNILERVVQDLADVAKVDQEPRA 163 Query: 123 EGRQMIMILSSK 134 EGR + M+L K Sbjct: 164 EGRTLQMLLVPK 175 >gi|295093749|emb|CBK82840.1| bacterial translation initiation factor 3 (bIF-3) [Coprococcus sp. ART55/1] Length = 164 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MAQ+A LDLV+I P VCKI+D K RY + EA+KKQK+ +KEV++ P ID Sbjct: 31 KMAQDAGLDLVKIAPKAQPPVCKIVDYGKYRYEQARKEKEAKKKQKTMEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G KVK++++FRGRE+ H + + +L N E+ EI+ ID K Sbjct: 91 ANDLNTKINQARKFLEHGDKVKVTLRFRGRELAHVEQSKVILDNFAEKLAEIAVIDKPAK 150 Query: 122 FEGRQMIMILSSK 134 FEGR MIM L+ K Sbjct: 151 FEGRSMIMFLTQK 163 >gi|117928476|ref|YP_873027.1| translation initiation factor 3 [Acidothermus cellulolyticus 11B] gi|117648939|gb|ABK53041.1| bacterial translation initiation factor 3 (bIF-3) [Acidothermus cellulolyticus 11B] Length = 225 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P V K++D K +Y A EARK Q T IKE+K+RP I Sbjct: 63 LRLAEEADLDLVEVAPMARPPVVKLMDYGKFKYESAVKAREARKHQAQTVIKEMKLRPKI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL +G KVKI++ FRGRE ++G LL + E ++ ++ P Sbjct: 123 DNHDYETKKNHVVRFLNEGDKVKITIMFRGREQSRPEMGLRLLQRLAEDVADLGYVEAAP 182 Query: 121 KFEGRQMIMILSS 133 K +GR M MIL Sbjct: 183 KLDGRNMTMILGP 195 >gi|288934885|ref|YP_003438944.1| translation initiation factor IF-3 [Klebsiella variicola At-22] gi|288889594|gb|ADC57912.1| translation initiation factor IF-3 [Klebsiella variicola At-22] Length = 180 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLTRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|241890072|ref|ZP_04777370.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379] gi|329767186|ref|ZP_08258713.1| translation initiation factor IF-3 [Gemella haemolysans M341] gi|241863694|gb|EER68078.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379] gi|328836853|gb|EGF86500.1| translation initiation factor IF-3 [Gemella haemolysans M341] Length = 175 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ NLD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERMNLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKEKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPK 172 >gi|50086066|ref|YP_047576.1| translation initiation factor IF-3 [Acinetobacter sp. ADP1] gi|61213106|sp|Q6F861|IF3_ACIAD RecName: Full=Translation initiation factor IF-3 gi|49532042|emb|CAG69754.1| protein chain initiation factor IF-3 [Acinetobacter sp. ADP1] Length = 183 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 47 LRAAEEVELDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E ++ P Sbjct: 107 DVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+L K Sbjct: 167 KMEGRQMGMLLGPK 180 >gi|296113665|ref|YP_003627603.1| translation initiation factor IF-3 [Moraxella catarrhalis RH4] gi|295921359|gb|ADG61710.1| translation initiation factor IF-3 [Moraxella catarrhalis RH4] gi|326562409|gb|EGE12728.1| translation initiation factor IF-3 [Moraxella catarrhalis 7169] gi|326562778|gb|EGE13073.1| translation initiation factor IF-3 [Moraxella catarrhalis 46P47B1] gi|326563182|gb|EGE13450.1| translation initiation factor IF-3 [Moraxella catarrhalis 12P80B1] gi|326563500|gb|EGE13763.1| translation initiation factor IF-3 [Moraxella catarrhalis 103P14B1] gi|326569117|gb|EGE19179.1| translation initiation factor IF-3 [Moraxella catarrhalis BC1] gi|326570603|gb|EGE20639.1| translation initiation factor IF-3 [Moraxella catarrhalis BC7] gi|326571310|gb|EGE21327.1| translation initiation factor IF-3 [Moraxella catarrhalis BC8] gi|326572995|gb|EGE22974.1| translation initiation factor IF-3 [Moraxella catarrhalis CO72] gi|326573809|gb|EGE23766.1| translation initiation factor IF-3 [Moraxella catarrhalis 101P30B1] gi|326574767|gb|EGE24701.1| translation initiation factor IF-3 [Moraxella catarrhalis O35E] Length = 146 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + NLDLVEI + P VCKI+D ++ Y ++ A EA+K QK T ++E+K+RP Sbjct: 10 LKAALDVNLDLVEIVADAKPPVCKIMDYKRYLYEQKQKAKEAKKNQKQTQVREIKLRPGT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL + KVKIS++FRGRE+ HQ++G+ L I E EI+ ++ P Sbjct: 70 EEADYQVKLRKIVEFLENKDKVKISIRFRGREMAHQEIGKAQLDRIIEDTAEIAIVEQAP 129 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 130 KVEGRQMGMLLGP 142 >gi|170016925|ref|YP_001727844.1| translation initiation factor 3 [Leuconostoc citreum KM20] gi|169803782|gb|ACA82400.1| Translation initiation factor 3 (IF-3) [Leuconostoc citreum KM20] Length = 143 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A + + DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDLDQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|219850024|ref|YP_002464457.1| translation initiation factor IF-3 [Chloroflexus aggregans DSM 9485] gi|219544283|gb|ACL26021.1| translation initiation factor IF-3 [Chloroflexus aggregans DSM 9485] Length = 252 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E DLVE+ + P VC++LD K RY K EAR+ QK + +K++++ P Sbjct: 35 LAMAEERGYDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARRNQKQSELKQIRLMPKT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+ VK FL G KVK +++FRGRE+ H ++GR++L I E+ +I+ I+ +P Sbjct: 95 DDHDVAVKANQARRFLLAGDKVKFNLRFRGREVAHPEIGRKMLDEIAEQLSDIAIIEQKP 154 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+L+ Sbjct: 155 LMEGRVLSMLLAPNA 169 >gi|326331229|ref|ZP_08197523.1| translation initiation factor IF-3 [Nocardioidaceae bacterium Broad-1] gi|325950999|gb|EGD43045.1| translation initiation factor IF-3 [Nocardioidaceae bacterium Broad-1] Length = 271 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVEI P VCK++D K +Y + A EAR+ Q + IKE+K+RP I Sbjct: 79 LRLAQEADLDLVEIAPQGKPPVCKLMDYGKFKYENAQKAREARRNQTNVIIKEMKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVKI++ FRGRE +LG LL + + ++ ++ P Sbjct: 139 DKHDYETKKGHVVRFLNAGDKVKITIMFRGREQHRPELGFRLLQQLADDVQDLGFVESSP 198 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 199 KQDGRNMIMVLGP 211 >gi|289450192|ref|YP_003475581.1| translation initiation factor IF-3 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184739|gb|ADC91164.1| translation initiation factor IF-3 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 195 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 86/131 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA+LDLV I + VC+++D K ++ K EA++ QK +KEV ++ Sbjct: 60 LRQAEEADLDLVLISPNPDNPVCRVMDYGKYQFEQAKREKEAKRNQKVVEVKEVGLKLTT 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL KLK + FLRDG +VKIS++FRGRE+ + G E+++++ ++ E++++D P Sbjct: 120 EEHDLGFKLKNAEKFLRDGNRVKISIRFRGREMAYTQQGYEVMNSVSDKLAEVAQVDRAP 179 Query: 121 KFEGRQMIMIL 131 + EGR MIM L Sbjct: 180 RVEGRNMIMFL 190 >gi|302386672|ref|YP_003822494.1| translation initiation factor IF-3 [Clostridium saccharolyticum WM1] gi|302197300|gb|ADL04871.1| translation initiation factor IF-3 [Clostridium saccharolyticum WM1] Length = 164 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LQMAKEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E+ +I+ ID Sbjct: 90 DTNDLNTKMGAARKFLEKGDKVKVTLRFRGREMAHMSKSKYILDDFAEKLADIATIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|291279884|ref|YP_003496719.1| translation initiation factor IF-3 [Deferribacter desulfuricans SSM1] gi|290754586|dbj|BAI80963.1| translation initiation factor IF-3 [Deferribacter desulfuricans SSM1] Length = 155 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKK--QKSTGIKEVKMRP 58 +++A+E DLVE+ + P VCK++D K ++ K EARKK Q +KE+K RP Sbjct: 18 LKVAEERGYDLVEVAPNAKPPVCKVMDYGKYKFEKNKKEREARKKLRQHQIDVKEMKFRP 77 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD QVKLK + FL DG KVK+ +++RGRE+ Q+ G E+L+ I ++ ++ Sbjct: 78 KIDEHDYQVKLKHVKRFLEDGDKVKVVMRYRGREMAFQEQGLEVLNRIVRDLEDLCVVEK 137 Query: 119 EPKFEGRQMIMILSSK 134 P+ +GRQ +M+L+ K Sbjct: 138 HPEMQGRQQVMVLAPK 153 >gi|312961942|ref|ZP_07776439.1| Translation initiation factor IF-3 [Pseudomonas fluorescens WH6] gi|311283752|gb|EFQ62336.1| Translation initiation factor IF-3 [Pseudomonas fluorescens WH6] Length = 177 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E+ LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEESKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPK 174 >gi|227892828|ref|ZP_04010633.1| translational initiation factor IF3 [Lactobacillus ultunensis DSM 16047] gi|227865330|gb|EEJ72751.1| translational initiation factor IF3 [Lactobacillus ultunensis DSM 16047] Length = 149 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KLK + FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 67 EGNDFDTKLKHVRKFLSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIASVISR 126 Query: 120 PKFEGRQMIMILS 132 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLA 139 >gi|319651797|ref|ZP_08005922.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2] gi|317396449|gb|EFV77162.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2] Length = 167 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P V +I+D K ++ QK EARK QK IKEV++ P I Sbjct: 31 LEIASRANLDLVLVAPNAKPPVARIMDYGKFKFEQQKKDKEARKNQKIISIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+++G+ +L + E++ ++ P Sbjct: 91 EEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLIRFAQACNEVAVVESHP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M M+L+ K Sbjct: 151 KMDGRSMFMVLAPK 164 >gi|311279397|ref|YP_003941628.1| translation initiation factor IF-3 [Enterobacter cloacae SCF1] gi|308748592|gb|ADO48344.1| translation initiation factor IF-3 [Enterobacter cloacae SCF1] Length = 180 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|290449|gb|AAA51467.1| initiation factor 3 [Escherichia coli] Length = 180 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESSP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|256822931|ref|YP_003146894.1| translation initiation factor IF-3 [Kangiella koreensis DSM 16069] gi|256796470|gb|ACV27126.1| translation initiation factor IF-3 [Kangiella koreensis DSM 16069] Length = 179 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA+ DLVE+ P VCK++D K + +K A+KKQK T +KE+K RP Sbjct: 43 LAQAKEASQDLVEVSPDADPPVCKVMDFGKFLFEQKKAKAAAKKKQKVTHVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL DG K K++V+FRGRE+ HQ+LG ELL +++ E ++ P Sbjct: 103 DIGDYQVKLRNLIRFLEDGDKAKVTVRFRGREMAHQELGMELLKRVEKDLEEYGAVEHRP 162 Query: 121 KFEGRQMIMILSSK 134 EGRQM M++ K Sbjct: 163 SMEGRQMTMVIGPK 176 >gi|229824399|ref|ZP_04450468.1| hypothetical protein GCWU000282_01720 [Catonella morbi ATCC 51271] gi|229786199|gb|EEP22313.1| hypothetical protein GCWU000282_01720 [Catonella morbi ATCC 51271] Length = 171 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLV + + P V +I+D K RY +QK E RK QK +KEV++ P I Sbjct: 31 LTIAESFGLDLVLVSPNAKPPVARIMDYGKYRYEMQKKEKEQRKNQKIVTVKEVRLSPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL G KVK S++FRGR I H++LG+++L + + +S ++ P Sbjct: 91 EDHDYQTKLRQAIKFLEHGDKVKASIRFRGRAITHKELGQDVLEDFIDDTSHVSTVEARP 150 Query: 121 KFEGRQMIMILS 132 K EGR M ++L+ Sbjct: 151 KMEGRSMFIVLA 162 >gi|462396|sp|P33318|IF3_KLEPN RecName: Full=Translation initiation factor IF-3 gi|149215|gb|AAC36811.1| translation initiation factor IF3 [Klebsiella pneumoniae] Length = 180 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVEAFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|317047869|ref|YP_004115517.1| translation initiation factor IF-3 [Pantoea sp. At-9b] gi|316949486|gb|ADU68961.1| translation initiation factor IF-3 [Pantoea sp. At-9b] Length = 180 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGIEVLNRVKEDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|171058429|ref|YP_001790778.1| initiation factor 3 [Leptothrix cholodnii SP-6] gi|170775874|gb|ACB34013.1| initiation factor 3 [Leptothrix cholodnii SP-6] Length = 135 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 88/132 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 M+ E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP D Sbjct: 1 MSAENDVDLVEISATAQPPVCRLMDYGKFKYLEQKKAAEAKAKQHVIDIKEVKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ + FL +G K K+++++RGREI HQD+G LL I++ ++S ++ P+ Sbjct: 61 GDYQIKMRNLRRFLEEGDKGKVTLRYRGREITHQDIGMRLLERIRDELTDVSVVENMPRL 120 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L K Sbjct: 121 EGRQMIMVLGPK 132 >gi|308535278|ref|YP_002138800.2| translation initiation factor IF-3 [Geobacter bemidjiensis Bem] gi|308052623|gb|ACH39004.2| translation initiation factor IF-3 [Geobacter bemidjiensis Bem] Length = 173 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKLAEAKKKQVQVELKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 96 DTHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFASELADIALVEVRQ 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|302335526|ref|YP_003800733.1| bacterial translation initiation factor 3 (bIF-3) [Olsenella uli DSM 7084] gi|301319366|gb|ADK67853.1| bacterial translation initiation factor 3 (bIF-3) [Olsenella uli DSM 7084] Length = 189 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI + P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 38 RIADEQNLDLVEIAPNAEPPVCKVMDYRKFKYEQDRKAKAARKKQVRVEVKEMKFRPKID 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FLR G +VK+++ FRGRE+ H + G +L + + + ++ +PK Sbjct: 98 VGDYTTKKNHVMRFLRKGARVKVTIMFRGREMAHPEQGLNVLERLAQDLKPYATVEQQPK 157 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 158 MEGRNMHMLVAP 169 >gi|260597638|ref|YP_003210209.1| translation initiation factor IF-3 [Cronobacter turicensis z3032] gi|260216815|emb|CBA30299.1| Translation initiation factor IF-3 [Cronobacter turicensis z3032] Length = 180 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|84496738|ref|ZP_00995592.1| putative translation initiation factor [Janibacter sp. HTCC2649] gi|84383506|gb|EAP99387.1| putative translation initiation factor [Janibacter sp. HTCC2649] Length = 289 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y A EARK Q +T IKE+K+RP I Sbjct: 20 LRLAAEADLDLVEVAPMAKPPVAKLMDFGKYKYEAAMKAREARKNQVNTVIKEIKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL G KVK+++ FRGRE +LG LL + E E+ ++ P Sbjct: 80 DPHDYATKKGHVVRFLGGGDKVKVTIMFRGREQSRPELGYRLLQKLAEDVIELGTVESAP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 140 KQDGRNMIMVLAP 152 >gi|262275835|ref|ZP_06053644.1| translation initiation factor 3 [Grimontia hollisae CIP 101886] gi|262219643|gb|EEY70959.1| translation initiation factor 3 [Grimontia hollisae CIP 101886] Length = 159 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+++D K Y K A E +KKQK IKE+K RP Sbjct: 23 LRTAEEAGVDLVEISPNAEPPVCRVMDYGKFIYEKSKAAKEQKKKQKVVQIKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + F+ +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P Sbjct: 83 DVGDYQVKLRNLVRFIEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIASVESFP 142 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 143 SRIEGRQMIMVLAPK 157 >gi|295425302|ref|ZP_06818005.1| translation initiation factor IF3 [Lactobacillus amylolyticus DSM 11664] gi|295065078|gb|EFG55983.1| translation initiation factor IF3 [Lactobacillus amylolyticus DSM 11664] Length = 143 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A +A LDL I + P V +I+D K R+ QK E+RK K+ +KE+++ P I Sbjct: 1 MRQASDAGLDLALISPNAKPPVARIMDYGKYRFQQQKKLKESRKNSKTVSVKEIRLSPTI 60 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KLK FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 61 EGNDFDTKLKHAKKFLTKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIATVISR 120 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 121 PKMEGRSMFLMLAPKS 136 >gi|270158050|ref|ZP_06186707.1| putative translation initiation factor IF-3 [Legionella longbeachae D-4968] gi|269990075|gb|EEZ96329.1| putative translation initiation factor IF-3 [Legionella longbeachae D-4968] Length = 127 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/123 (43%), Positives = 80/123 (65%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L I++ E + ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERIQQDTAEFAIVEQHAKREGRQLLMVL 120 Query: 132 SSK 134 S K Sbjct: 121 SPK 123 >gi|253700847|ref|YP_003022036.1| translation initiation factor IF-3 [Geobacter sp. M21] gi|251775697|gb|ACT18278.1| translation initiation factor IF-3 [Geobacter sp. M21] Length = 173 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKLAEAKKKQVQVELKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 96 DTHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFAAELADIALVEVRQ 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|320449907|ref|YP_004202003.1| translation initiation factor IF-3 [Thermus scotoductus SA-01] gi|320150076|gb|ADW21454.1| translation initiation factor IF-3 [Thermus scotoductus SA-01] Length = 157 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 20 LRLAQEQDLDLVLVGPTADPPVARIMDYSKWRYEQQVAEKEARKKAKRTEVKSIKFRVKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL +G KVK+++ FRGRE+ H +LG LL + E ++ ++ +P Sbjct: 80 DDHDYQTKLNHIKRFLAEGHKVKVTIMFRGREMSHPELGERLLERVAEDLKGLAVVEMKP 139 Query: 121 KFEGRQMIMILSSKCV 136 + GR M M+L+ V Sbjct: 140 ELLGRDMNMLLAPAKV 155 >gi|88800312|ref|ZP_01115878.1| translation initiation factor IF-3 [Reinekea sp. MED297] gi|88776889|gb|EAR08098.1| translation initiation factor IF-3 [Reinekea sp. MED297] Length = 153 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I S+ P V KI+DL K Y +K A+KKQ +KEVK RP D+ Sbjct: 21 AQEAGLDLVQI-SNADPVVAKIMDLGKKLYEEKKAKAAAKKKQSQVQVKEVKFRPNTDIG 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL+ + FL +G K K++++FRGRE+ HQ+LG ELL ++ +I++++ PK E Sbjct: 80 DYNVKLRNLSRFLEEGNKAKVTLRFRGREMAHQELGMELLKRVETDLEDIAQVELRPKME 139 Query: 124 GRQMIMILS 132 GRQ+ M+L+ Sbjct: 140 GRQLTMVLA 148 >gi|257456996|ref|ZP_05622177.1| translation initiation factor IF-3 [Treponema vincentii ATCC 35580] gi|257445705|gb|EEV20767.1| translation initiation factor IF-3 [Treponema vincentii ATCC 35580] Length = 173 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+ NLDLVE+ P VCKILD K R+ ++K +++KKQK +KE++M+P I Sbjct: 37 LRMAQDVNLDLVEVAPQADPPVCKILDYGKYRFELEKKLRDSKKKQKLQVLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K + I FL G KVK++++FRGRE+ H +LG ++L+N+ + G ++ P Sbjct: 97 NDHDLSFKARHIQDFLDGGDKVKVTIRFRGRELAHTELGLDVLNNVLAKLGGDLTVEKPP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 157 AMEGRTMSMTLAPKS 171 >gi|197284913|ref|YP_002150785.1| translation initiation factor IF-3 [Proteus mirabilis HI4320] gi|238693142|sp|B4ETK7|IF3_PROMH RecName: Full=Translation initiation factor IF-3 gi|194682400|emb|CAR42256.1| translation initiation factor IF-3 [Proteus mirabilis HI4320] Length = 179 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K E +KKQK +KEVK RP Sbjct: 43 LEKAEEAGADLVEISPNAEPPVCRIMDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ I+E E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEMLNRIREDLDELASVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 NKIEGRQMIMVLAPK 177 >gi|227872174|ref|ZP_03990541.1| translation initiation factor IF3 [Oribacterium sinus F0268] gi|227841957|gb|EEJ52220.1| translation initiation factor IF3 [Oribacterium sinus F0268] Length = 208 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A+EA LDL++I ++ P V +I D K RY + + EARK Q +T +KE++M P ID Sbjct: 75 QKAREAELDLIKIAATAQPPVVRIADYGKYRYELLRKEKEARKNQHTTELKEIRMTPNID 134 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL KL A FL G KVKI+++FRGRE+ + + +L E+ +I+ +D K Sbjct: 135 TNDLNTKLSAARKFLEKGNKVKIALRFRGREMSRMNQSKYILDEFGEKLSDIAVLDKAAK 194 Query: 122 FEGRQMIMILSSK 134 EGR M ++LS K Sbjct: 195 VEGRNMAVVLSPK 207 >gi|300787907|ref|YP_003768198.1| translation initiation factor IF-3 [Amycolatopsis mediterranei U32] gi|299797421|gb|ADJ47796.1| translation initiation factor IF-3 [Amycolatopsis mediterranei U32] Length = 205 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 53 LRLAQENDLDLVEVAPQARPPVCKLMDFGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E E+ ++ Sbjct: 113 DQHDYETKKGHVSRFLAAGNKVKVTIMFRGREQSRPELGYRLLQKLAEDVTELGFVESSA 172 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 173 KQDGRNMIMVLAP 185 >gi|229591578|ref|YP_002873697.1| translation initiation factor IF-3 [Pseudomonas fluorescens SBW25] gi|259491512|sp|C3JZN6|IF3_PSEFS RecName: Full=Translation initiation factor IF-3 gi|229363444|emb|CAY50643.1| translation initiation factor IF-3 [Pseudomonas fluorescens SBW25] Length = 183 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E+ LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEESKLDLVEISADAIPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLLEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPK 180 >gi|325677877|ref|ZP_08157519.1| translation initiation factor IF-3 [Ruminococcus albus 8] gi|324110431|gb|EGC04605.1| translation initiation factor IF-3 [Ruminococcus albus 8] Length = 174 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLV+I TP VC+I+D K + QK EARK QK IKE++M I Sbjct: 38 LKIAFEKDLDLVKIAPQATPPVCRIMDYGKFLFEQQKREKEARKNQKVIEIKEIRMSSTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G K+K+SV+FR R + H G ELL KE E+ +D Sbjct: 98 DTHDFDTKVNQAIKFLKGGDKLKVSVRFRKRTVAHPQFGEELLVKFKEAVSEVGIVDKPS 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR ++M ++ K Sbjct: 158 KMEGRSLVMFVAPKA 172 >gi|238895234|ref|YP_002919969.1| translation initiation factor IF-3 [Klebsiella pneumoniae NTUH-K2044] gi|262044122|ref|ZP_06017197.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330009685|ref|ZP_08306559.1| translation initiation factor IF-3 [Klebsiella sp. MS 92-3] gi|238547551|dbj|BAH63902.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038521|gb|EEW39717.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534773|gb|EGF61329.1| translation initiation factor IF-3 [Klebsiella sp. MS 92-3] Length = 144 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|82543880|ref|YP_407827.1| translation initiation factor IF-3 [Shigella boydii Sb227] gi|81245291|gb|ABB65999.1| protein chain initiation factor IF-3 [Shigella boydii Sb227] gi|320185859|gb|EFW60610.1| Translation initiation factor 3 [Shigella flexneri CDC 796-83] gi|332096328|gb|EGJ01329.1| translation initiation factor IF-3 [Shigella boydii 3594-74] Length = 144 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQ+ +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|219117177|ref|XP_002179383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409274|gb|EEC49206.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 186 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 80/128 (62%) Query: 7 ANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 LDL+ ++++ P VCKI+D K RY ++K A E +K K T IKEVKM ID+HD Sbjct: 59 GGLDLILVNNNSDPPVCKIVDYSKYRYQLEKKAKEVKKNSKGTEIKEVKMSYKIDVHDYS 118 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 V+ K+ FL+ G +VK +V FRGRE+ H +LG +LL+ + E + +PK EGR Sbjct: 119 VRKKSASKFLKQGNRVKCTVMFRGREVQHDNLGFDLLNRLASELEEYCMTESKPKREGRN 178 Query: 127 MIMILSSK 134 + +IL+ + Sbjct: 179 LSLILTPR 186 >gi|294787703|ref|ZP_06752947.1| translation initiation factor IF-3 [Simonsiella muelleri ATCC 29453] gi|294483996|gb|EFG31679.1| translation initiation factor IF-3 [Simonsiella muelleri ATCC 29453] Length = 181 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M++E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 46 LAMSEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL G KVK++++FRGRE+ HQ++G +LL IK E +I+ P Sbjct: 106 DDGDYNIKMRKIKEFLSGGDKVKVTLRFRGREMAHQEIGAQLLERIKTELVEDGQIEQFP 165 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 166 KMEGRQMVMMVAPK 179 >gi|39931271|sp|Q83L38|IF3_SHIFL RecName: Full=Translation initiation factor IF-3 Length = 206 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 69 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 128 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 129 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 188 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 189 TKIEGRQMIMVLAPK 203 >gi|39931212|sp|Q7NYC5|IF3_CHRVO RecName: Full=Translation initiation factor IF-3 Length = 175 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+E ++DLVEI + P VCK++D K +Y K EA++KQK IKE+K RP Sbjct: 40 MALAEENDVDLVEISPTAQPPVCKLMDYGKYKYEQSKKRHEAKQKQKQVQIKEIKFRPGT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 100 DDGDYNVKLRNLVRFLTEGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 160 RLEGRQMVMMIAPK 173 >gi|237731270|ref|ZP_04561751.1| translation initiation factor IF3 [Citrobacter sp. 30_2] gi|291085450|ref|ZP_06353131.2| translation initiation factor IF-3 [Citrobacter youngae ATCC 29220] gi|226906809|gb|EEH92727.1| translation initiation factor IF3 [Citrobacter sp. 30_2] gi|291071040|gb|EFE09149.1| translation initiation factor IF-3 [Citrobacter youngae ATCC 29220] Length = 147 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 10 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 70 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRDDLSELAVVESFP 129 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 130 TKIEGRQMIMVLAPK 144 >gi|169829541|ref|YP_001699699.1| translation initiation factor IF-3 [Lysinibacillus sphaericus C3-41] gi|168994029|gb|ACA41569.1| Translation initiation factor IF-3 [Lysinibacillus sphaericus C3-41] Length = 167 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIAARVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+D+G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|329943114|ref|ZP_08291888.1| translation initiation factor IF-3 [Chlamydophila psittaci Cal10] gi|332287696|ref|YP_004422597.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] gi|313848270|emb|CBY17271.1| initiation factor IF-3 [Chlamydophila psittaci RD1] gi|325506988|gb|ADZ18626.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] gi|328814661|gb|EGF84651.1| translation initiation factor IF-3 [Chlamydophila psittaci Cal10] gi|328914949|gb|AEB55782.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] Length = 186 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 35 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G +++ + + ++ I+ EP Sbjct: 95 DDNDFATKLKQARGFIEKGNKVKITCMFRGRELAYPEHGYKVVQKMSQGLEDVGFIESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVVAPGTV 170 >gi|326693742|ref|ZP_08230747.1| translation initiation factor 3 [Leuconostoc argentinum KCTC 3773] Length = 143 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + + DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 EIANDLDQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|309810986|ref|ZP_07704784.1| translation initiation factor IF-3 [Dermacoccus sp. Ellin185] gi|308434950|gb|EFP58784.1| translation initiation factor IF-3 [Dermacoccus sp. Ellin185] Length = 242 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y A E+RK Q +T IKE+K+RP I Sbjct: 60 LRLAAEADLDLVEVAPQAKPPVAKLMDFGKFKYEAAMKARESRKNQVNTVIKEIKLRPKI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL G KVK+++ FRGRE +LG LL + E E++ I+ P Sbjct: 120 DQHDYDTKKGHVVRFLSAGDKVKVTIMFRGREQSRPELGFRLLQKLAEDVQELAFIESAP 179 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L Sbjct: 180 KQDGRNMVMVLGP 192 >gi|210632539|ref|ZP_03297449.1| hypothetical protein COLSTE_01352 [Collinsella stercoris DSM 13279] gi|210159486|gb|EEA90457.1| hypothetical protein COLSTE_01352 [Collinsella stercoris DSM 13279] Length = 200 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLVEI + P VCK++D K +Y A +ARK Q +KE+K RP ID Sbjct: 53 RIADDQNLDLVEIAPNADPPVCKVMDYGKFKYQQAMKAKQARKNQSKVEVKEMKFRPKID 112 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 113 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPFATVESQPK 172 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 173 LEGRNMLMLLAP 184 >gi|34496804|ref|NP_901019.1| translation initiation factor IF-3 [Chromobacterium violaceum ATCC 12472] gi|34102659|gb|AAQ59024.1| translation initiation factor IF-3 [Chromobacterium violaceum ATCC 12472] Length = 153 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+E ++DLVEI + P VCK++D K +Y K EA++KQK IKE+K RP Sbjct: 18 MALAEENDVDLVEISPTAQPPVCKLMDYGKYKYEQSKKRHEAKQKQKQVQIKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 78 DDGDYNVKLRNLVRFLTEGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 137 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPK 151 >gi|163815466|ref|ZP_02206839.1| hypothetical protein COPEUT_01631 [Coprococcus eutactus ATCC 27759] gi|158449103|gb|EDP26098.1| hypothetical protein COPEUT_01631 [Coprococcus eutactus ATCC 27759] Length = 164 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +MAQ+A LDLV+I P VCKI+D K RY + EA+KKQK+ +KEV++ P I Sbjct: 30 FKMAQDAGLDLVKIAPKAQPPVCKIVDYGKYRYEQARKEKEAKKKQKTMEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ FL G KVK++++FRGRE+ H + + +L N E+ EI+ +D Sbjct: 90 DSNDLNTKINQARKFLEHGDKVKVTLRFRGRELAHVEQSKVILDNFAEKLAEIAVVDKPA 149 Query: 121 KFEGRQMIMILSSK 134 KFEGR MIM L+ K Sbjct: 150 KFEGRSMIMFLTQK 163 >gi|271500481|ref|YP_003333506.1| translation initiation factor IF-3 [Dickeya dadantii Ech586] gi|270344036|gb|ACZ76801.1| translation initiation factor IF-3 [Dickeya dadantii Ech586] Length = 180 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLNELSVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|24112886|ref|NP_707396.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 301] gi|30063015|ref|NP_837186.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|24051830|gb|AAN43103.1| protein chain initiation factor IF-3 [Shigella flexneri 2a str. 301] gi|30041264|gb|AAP16993.1| protein chain initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|281600918|gb|ADA73902.1| Translation initiation factor IF-3 [Shigella flexneri 2002017] Length = 144 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|330445796|ref|ZP_08309448.1| protein chain initiation factor IF-3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489987|dbj|GAA03945.1| protein chain initiation factor IF-3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 129 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +K QK IKEVK RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK EI+ + P + EGRQM Sbjct: 61 LRNLTRFLEEGNKGKVTLRFRGREMAHQGIGIELLNRIKSELEEIAVCESFPNRVEGRQM 120 Query: 128 IMILSSK 134 M+L+ K Sbjct: 121 TMMLAPK 127 >gi|314923958|gb|EFS87789.1| translation initiation factor IF-3 [Propionibacterium acnes HL001PA1] Length = 213 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVAKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|307131176|ref|YP_003883192.1| protein chain initiation factor IF-3 [Dickeya dadantii 3937] gi|306528705|gb|ADM98635.1| protein chain initiation factor IF-3 [Dickeya dadantii 3937] Length = 180 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLNELSVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|50955434|ref|YP_062722.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951916|gb|AAT89617.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 268 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V KI+D K +Y + A EAR+ Q +T +KEV+ R I Sbjct: 83 IRLAQEADLDLVEVAPNSKPPVAKIMDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K +GFL+ G KVK + FRGRE + G LL E E+ ++ P Sbjct: 143 DKHDYETKRKRAEGFLQAGDKVKAMILFRGREQSRPEQGVRLLQRFAEDVAELGTVESNP 202 Query: 121 KFEGRQMIMILS 132 +GR M+MI+S Sbjct: 203 TIDGRNMVMIIS 214 >gi|308233822|ref|ZP_07664559.1| translation initiation factor IF-3 [Atopobium vaginae DSM 15829] Length = 142 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKIEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VKI++ FRGRE+ H + G+ +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKKGARVKITIMFRGREMAHPEQGQNVLDRLAADLKPYATVEAKPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|110805472|ref|YP_688992.1| translation initiation factor IF-3 [Shigella flexneri 5 str. 8401] gi|110615020|gb|ABF03687.1| protein chain initiation factor IF-3 [Shigella flexneri 5 str. 8401] Length = 144 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE++HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMVHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|113474737|ref|YP_720798.1| translation initiation factor 3 [Trichodesmium erythraeum IMS101] gi|110165785|gb|ABG50325.1| bacterial translation initiation factor 3 (bIF-3) [Trichodesmium erythraeum IMS101] Length = 178 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLV + P VC+I+D K + +K +A++KQ + +KEVKMR I Sbjct: 42 LRMAQEKGLDLVMVSDKADPPVCRIIDYGKYLFEQKKKVQDAKRKQHNAEVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V+L FL G KVK ++ FRGREI H +L ELL + +++ I P Sbjct: 102 EEHDYNVRLSHAKRFLESGDKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 162 KKEGRSMMMLLSPK 175 >gi|229816631|ref|ZP_04446920.1| hypothetical protein COLINT_03679 [Collinsella intestinalis DSM 13280] gi|229807759|gb|EEP43572.1| hypothetical protein COLINT_03679 [Collinsella intestinalis DSM 13280] Length = 195 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLVEI + P VCK++D K +Y A +ARK Q +KE+K RP ID Sbjct: 48 RIADDQNLDLVEIAPNAEPPVCKVMDYGKFKYQQAMKAKQARKNQSKVEVKEMKFRPKID 107 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 108 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPFATVESQPK 167 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 168 LEGRNMLMLLAP 179 >gi|322514759|ref|ZP_08067784.1| translation initiation factor IF3 [Actinobacillus ureae ATCC 25976] gi|322119297|gb|EFX91417.1| translation initiation factor IF3 [Actinobacillus ureae ATCC 25976] Length = 159 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVEI + P VC+I++ K Y +K A E +KKQK IKE+K RP D Sbjct: 26 AEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQIKEIKFRPGTDDG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P K Sbjct: 86 DYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLERVKTDTAEVAVVESAPGKL 145 Query: 123 EGRQMIMILSSK 134 EGRQ +M+++ K Sbjct: 146 EGRQAVMVIAPK 157 >gi|251789559|ref|YP_003004280.1| translation initiation factor IF-3 [Dickeya zeae Ech1591] gi|247538180|gb|ACT06801.1| translation initiation factor IF-3 [Dickeya zeae Ech1591] Length = 180 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLSELSVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|328944550|ref|ZP_08242011.1| translation initiation factor IF3 [Atopobium vaginae DSM 15829] gi|327490951|gb|EGF22729.1| translation initiation factor IF3 [Atopobium vaginae DSM 15829] Length = 162 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKIEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VKI++ FRGRE+ H + G+ +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKKGARVKITIMFRGREMAHPEQGQNVLDRLAADLKPYATVEAKPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|300856609|ref|YP_003781593.1| putative translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] gi|300436724|gb|ADK16491.1| predicted translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] Length = 173 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I + P VCKI++ K Y K EARKKQK IKEV+ P I Sbjct: 38 LRLAEEKELDLVMISPNAKPPVCKIMNYGKFMYEQVKKDKEARKKQKVVNIKEVRFSPKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL G KVK++V+FRGRE + +G+++L + ++ I+ +P Sbjct: 98 EEHDISIKAKNARKFLLAGDKVKVTVRFRGREADYSFIGKKILDIFHSKLQDVCVIERQP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS+K Sbjct: 158 KLEGRNMIMFLSAK 171 >gi|320536886|ref|ZP_08036879.1| translation initiation factor IF-3 [Treponema phagedenis F0421] gi|320146269|gb|EFW37892.1| translation initiation factor IF-3 [Treponema phagedenis F0421] Length = 174 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ NLDLVE+ P VCKILD K R+ ++K +++KKQK +KE++M+P I Sbjct: 37 LRMAKDINLDLVEVAPQANPPVCKILDYGKYRFEMEKKLRDSKKKQKLQTLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ K K I FL G KVK++++FRGRE+ H +LG ++L N+ +R ++ +P Sbjct: 97 NDHDMNFKAKHIQKFLDGGDKVKVTIRFRGRELAHTNLGYDVLQNVLQRLSGDFSVEKQP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 157 AMEGRTMSMTLAPKS 171 >gi|127512959|ref|YP_001094156.1| translation initiation factor IF-3 [Shewanella loihica PV-4] gi|126638254|gb|ABO23897.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella loihica PV-4] Length = 173 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 87/133 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 39 ELADEAGVDLVEISPNAEPPVCRIMDYGKYLFDKAKAQKEQKKKQKQIQVKEIKFRPGTD 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG LL+ IK+ EI+ ++ PK Sbjct: 99 ENDYQVKLRNLKRFLEDGDKAKVTLRFRGREMAHQSLGMNLLNRIKDDLAEIAVVEAFPK 158 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 159 MEGRQAVMVLAPK 171 >gi|310830634|ref|YP_003965735.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] gi|309250101|gb|ADO59667.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] Length = 168 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 6/136 (4%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLV I + TP VCK+++ K Y + E RK QK KEV+ ID Sbjct: 35 IAEEAKLDLVNISPAATPPVCKVVNYGKFLYEQNRKEKEIRKNQKIVETKEVRFSARIDE 94 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK---ERFGEISRIDCE 119 HD Q K + + FL+ G +VK+S++F+GREI H ++G +L + E FG R Sbjct: 95 HDFQTKSRNVQKFLKSGNRVKLSIQFKGREIAHSEIGLNILLRLAAEMEAFGSPERT--- 151 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQMIM L+ K Sbjct: 152 PKLEGRQMIMFLNPKA 167 >gi|149177025|ref|ZP_01855633.1| translation initiation factor IF-3 [Planctomyces maris DSM 8797] gi|148844090|gb|EDL58445.1| translation initiation factor IF-3 [Planctomyces maris DSM 8797] Length = 131 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 2/131 (1%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EANLDLVE+ S P VC+I+D KL+Y +K KQ +KE++MRP I HD+ Sbjct: 2 EANLDLVEVASDAKPPVCRIMDYGKLKYE-RKKKTSKNTKQHQVQLKEIRMRPKIGKHDI 60 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF-EG 124 + KLK+ FL KVK ++ FRGRE H +LGR +L +I+E+ EI++++ G Sbjct: 61 EFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGDIQEQLSEIAKVEQAATMASG 120 Query: 125 RQMIMILSSKC 135 R MIM+L+ + Sbjct: 121 RNMIMVLAPRS 131 >gi|62185352|ref|YP_220137.1| translation initiation factor IF-3 [Chlamydophila abortus S26/3] gi|62148419|emb|CAH64186.1| initiation factor IF-3 [Chlamydophila abortus S26/3] Length = 180 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 29 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRVKEVKLKPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G ++ + + ++ I+ EP Sbjct: 89 DDNDFATKLKQARGFIEKGNKVKITCMFRGRELAYPEHGYTVVQKMSQGLEDVGFIESEP 148 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 149 KLNGRSLICVVAPGTV 164 >gi|304570590|ref|YP_389129.2| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 194 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 86/131 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E LDLVE+ + P VC+++D K +Y QK EA+K+Q +KE+K+RP D Sbjct: 59 VAKEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDE 118 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK I FL DG + K++V FRGREI+H+D G LL +E +I++++ EP+ Sbjct: 119 HDYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRA 178 Query: 123 EGRQMIMILSS 133 EGR + M+L+ Sbjct: 179 EGRTLHMLLTP 189 >gi|282882545|ref|ZP_06291166.1| translation initiation factor IF-3 [Peptoniphilus lacrimalis 315-B] gi|300813873|ref|ZP_07094178.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297687|gb|EFA90162.1| translation initiation factor IF-3 [Peptoniphilus lacrimalis 315-B] gi|300512060|gb|EFK39255.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 181 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ + LDLV + + P VCKI+D K RY + K EA+KKQK IKE+++ P I Sbjct: 46 LDMAEASKLDLVNVAPNAKPPVCKIMDYGKYRYELIKKEKEAKKKQKVINIKELRLTPNI 105 Query: 61 DLHDLQVKL-KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + HDL K +AID FL+ G +VK++V+FRGRE+ H D+GRE+L E E +D + Sbjct: 106 ETHDLNTKANRAID-FLKSGDRVKVAVRFRGREMGHTDIGREVLDKFVELVSEYGVVDKK 164 Query: 120 PKFEGRQMIMILSSK 134 PK EG+ MIM LS+K Sbjct: 165 PKMEGKNMIMFLSAK 179 >gi|78220085|gb|ABB39434.1| bacterial translation initiation factor 3 (bIF-3) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 169 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 86/131 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E LDLVE+ + P VC+++D K +Y QK EA+K+Q +KE+K+RP D Sbjct: 34 VAKEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDE 93 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK I FL DG + K++V FRGREI+H+D G LL +E +I++++ EP+ Sbjct: 94 HDYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRA 153 Query: 123 EGRQMIMILSS 133 EGR + M+L+ Sbjct: 154 EGRTLHMLLTP 164 >gi|115375481|ref|ZP_01462741.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|115367524|gb|EAU66499.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 249 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVE++ P VCKI+D K +Y +K A EA+KKQ +KEVK+RP Sbjct: 40 LERAQSEGLDLVEVNPMAKPPVCKIMDYGKFKYEEKKKASEAKKKQVVVHLKEVKLRPKT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+++ FRGREI H++LG +L ++ + E++ ++ P Sbjct: 100 EEHDYEFKVRNVKRFLEEGNKAKVTIVFRGREITHKELGSAILDDVNKDLKEVAVVEQAP 159 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 160 RMEGRQMFMILAP 172 >gi|269126373|ref|YP_003299743.1| translation initiation factor IF-3 [Thermomonospora curvata DSM 43183] gi|268311331|gb|ACY97705.1| translation initiation factor IF-3 [Thermomonospora curvata DSM 43183] Length = 177 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ + P V K++D K +Y A EAR+ Q T IKE+K+RP I Sbjct: 23 LELAREADLDLVEVAPTARPPVAKLMDYGKFKYESAMKAREARRNQAHTVIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + + ++ ++ P Sbjct: 83 DPHDYETKKGHVVRFLKGGDKVKVTIMFRGREQSRPELGFRLLQRLADDVADLGFVESRP 142 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 143 KQDGRNMIMVIGP 155 >gi|82523877|emb|CAI78600.1| translation initiation factor IF-3 [uncultured delta proteobacterium] Length = 141 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E +D+VE+ ++ TP VCKI+D K +Y K EA+KKQ +KEVK+RP Sbjct: 7 LEKAGEIGVDIVEVAANATPPVCKIMDYGKFKYEQNKQQQEAKKKQTIIQVKEVKIRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ I+ FL D +VK+++ FRGREI + LG ++L I E + ID P Sbjct: 67 EEHDYQFKMRHIERFLADKNRVKVTIMFRGREIAYPQLGSKILDRIAEELKDQVNIDSHP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIM +SSK Sbjct: 127 KMEGRNMIMYISSKT 141 >gi|39546314|ref|NP_460300.2| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|462399|sp|P33321|IF3_SALTY RecName: Full=Translation initiation factor IF-3 gi|154153|gb|AAC36814.1| translation intitiation factor IF3 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|267993214|gb|ACY88099.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323129605|gb|ADX17035.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623539|gb|EGE29884.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 180 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|225022607|ref|ZP_03711799.1| hypothetical protein CORMATOL_02649 [Corynebacterium matruchotii ATCC 33806] gi|305682038|ref|ZP_07404842.1| translation initiation factor IF-3 [Corynebacterium matruchotii ATCC 14266] gi|224944515|gb|EEG25724.1| hypothetical protein CORMATOL_02649 [Corynebacterium matruchotii ATCC 33806] gi|305658511|gb|EFM48014.1| translation initiation factor IF-3 [Corynebacterium matruchotii ATCC 14266] Length = 145 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 8 KLAYDADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E + ++ +PK Sbjct: 68 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQSRPELGTRLLDRLAEDVADYGIVESKPK 127 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 128 QDGRNMTMVFGP 139 >gi|50842895|ref|YP_056122.1| translation initiation factor IF-3 [Propionibacterium acnes KPA171202] gi|50840497|gb|AAT83164.1| translation initiation factor IF-3 [Propionibacterium acnes KPA171202] gi|332675831|gb|AEE72647.1| translation initiation factor IF-3 [Propionibacterium acnes 266] Length = 268 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 75 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 135 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 194 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 195 KQEGRNMLMILAP 207 >gi|313836584|gb|EFS74298.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA2] gi|314928094|gb|EFS91925.1| translation initiation factor IF-3 [Propionibacterium acnes HL044PA1] gi|314972094|gb|EFT16191.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA3] Length = 266 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 74 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 133 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 134 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 193 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 194 KQEGRNMLMILAP 206 >gi|307822739|ref|ZP_07652970.1| translation initiation factor IF-3 [Methylobacter tundripaludum SV96] gi|307736343|gb|EFO07189.1| translation initiation factor IF-3 [Methylobacter tundripaludum SV96] Length = 156 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 91/133 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A A+LDLVEI + P VCK+++ K ++ + K A+KKQK +KE+K RP D Sbjct: 21 QIAYAADLDLVEISPNADPPVCKVMNYGKYQFELNKKLAVAKKKQKQVQVKEIKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+++ FL DG K KI++++RGRE+ H+++G +LL I++ EI+ ++ PK Sbjct: 81 EGDYQVKLRSLTKFLNDGDKTKITLRYRGREMAHREIGVDLLKRIEKDLEEIAIVEQFPK 140 Query: 122 FEGRQMIMILSSK 134 EGRQM+M+++ K Sbjct: 141 MEGRQMVMVMAPK 153 >gi|327327991|gb|EGE69760.1| translation initiation factor IF-3 [Propionibacterium acnes HL103PA1] gi|328907935|gb|EGG27695.1| translation initiation factor IF-3 [Propionibacterium sp. P08] Length = 212 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|293446092|ref|ZP_06662514.1| translation initiation factor IF-3 [Escherichia coli B088] gi|291322922|gb|EFE62350.1| translation initiation factor IF-3 [Escherichia coli B088] Length = 152 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 75 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 134 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 135 TKIEGRQMIMVLAPK 149 >gi|282854559|ref|ZP_06263894.1| translation initiation factor IF-3 [Propionibacterium acnes J139] gi|289426514|ref|ZP_06428257.1| translation initiation factor IF-3 [Propionibacterium acnes SK187] gi|289427759|ref|ZP_06429470.1| translation initiation factor IF-3 [Propionibacterium acnes J165] gi|295130951|ref|YP_003581614.1| translation initiation factor IF-3 [Propionibacterium acnes SK137] gi|282582141|gb|EFB87523.1| translation initiation factor IF-3 [Propionibacterium acnes J139] gi|289153242|gb|EFD01960.1| translation initiation factor IF-3 [Propionibacterium acnes SK187] gi|289159023|gb|EFD07216.1| translation initiation factor IF-3 [Propionibacterium acnes J165] gi|291376339|gb|ADE00194.1| translation initiation factor IF-3 [Propionibacterium acnes SK137] gi|313763448|gb|EFS34812.1| translation initiation factor IF-3 [Propionibacterium acnes HL013PA1] gi|313773422|gb|EFS39388.1| translation initiation factor IF-3 [Propionibacterium acnes HL074PA1] gi|313793834|gb|EFS41863.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA1] gi|313801224|gb|EFS42482.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA2] gi|313811438|gb|EFS49152.1| translation initiation factor IF-3 [Propionibacterium acnes HL083PA1] gi|313813593|gb|EFS51307.1| translation initiation factor IF-3 [Propionibacterium acnes HL025PA1] gi|313816630|gb|EFS54344.1| translation initiation factor IF-3 [Propionibacterium acnes HL059PA1] gi|313819731|gb|EFS57445.1| translation initiation factor IF-3 [Propionibacterium acnes HL046PA2] gi|313822260|gb|EFS59974.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA1] gi|313823746|gb|EFS61460.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA2] gi|313826068|gb|EFS63782.1| translation initiation factor IF-3 [Propionibacterium acnes HL063PA1] gi|313829641|gb|EFS67355.1| translation initiation factor IF-3 [Propionibacterium acnes HL063PA2] gi|313831177|gb|EFS68891.1| translation initiation factor IF-3 [Propionibacterium acnes HL007PA1] gi|313834838|gb|EFS72552.1| translation initiation factor IF-3 [Propionibacterium acnes HL056PA1] gi|313840045|gb|EFS77759.1| translation initiation factor IF-3 [Propionibacterium acnes HL086PA1] gi|314914607|gb|EFS78438.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA4] gi|314919436|gb|EFS83267.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA1] gi|314920656|gb|EFS84487.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA3] gi|314924556|gb|EFS88387.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA3] gi|314930426|gb|EFS94257.1| translation initiation factor IF-3 [Propionibacterium acnes HL067PA1] gi|314954519|gb|EFS98925.1| translation initiation factor IF-3 [Propionibacterium acnes HL027PA1] gi|314957360|gb|EFT01463.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA1] gi|314962176|gb|EFT06277.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA2] gi|314963805|gb|EFT07905.1| translation initiation factor IF-3 [Propionibacterium acnes HL082PA1] gi|314966000|gb|EFT10099.1| translation initiation factor IF-3 [Propionibacterium acnes HL082PA2] gi|314968366|gb|EFT12465.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA1] gi|314974056|gb|EFT18152.1| translation initiation factor IF-3 [Propionibacterium acnes HL053PA1] gi|314976764|gb|EFT20859.1| translation initiation factor IF-3 [Propionibacterium acnes HL045PA1] gi|314978781|gb|EFT22875.1| translation initiation factor IF-3 [Propionibacterium acnes HL072PA2] gi|314981813|gb|EFT25906.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA3] gi|314984486|gb|EFT28578.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA1] gi|314986663|gb|EFT30755.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA2] gi|314990778|gb|EFT34869.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA3] gi|315079657|gb|EFT51647.1| translation initiation factor IF-3 [Propionibacterium acnes HL053PA2] gi|315081114|gb|EFT53090.1| translation initiation factor IF-3 [Propionibacterium acnes HL078PA1] gi|315083435|gb|EFT55411.1| translation initiation factor IF-3 [Propionibacterium acnes HL027PA2] gi|315087002|gb|EFT58978.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA3] gi|315089177|gb|EFT61153.1| translation initiation factor IF-3 [Propionibacterium acnes HL072PA1] gi|315090681|gb|EFT62657.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA4] gi|315094892|gb|EFT66868.1| translation initiation factor IF-3 [Propionibacterium acnes HL060PA1] gi|315095231|gb|EFT67207.1| translation initiation factor IF-3 [Propionibacterium acnes HL038PA1] gi|315099076|gb|EFT71052.1| translation initiation factor IF-3 [Propionibacterium acnes HL059PA2] gi|315100543|gb|EFT72519.1| translation initiation factor IF-3 [Propionibacterium acnes HL046PA1] gi|315104164|gb|EFT76140.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA2] gi|315106683|gb|EFT78659.1| translation initiation factor IF-3 [Propionibacterium acnes HL030PA1] gi|315108909|gb|EFT80885.1| translation initiation factor IF-3 [Propionibacterium acnes HL030PA2] gi|327329566|gb|EGE71325.1| translation initiation factor IF-3 [Propionibacterium acnes HL096PA3] gi|327329589|gb|EGE71347.1| translation initiation factor IF-3 [Propionibacterium acnes HL096PA2] gi|327333951|gb|EGE75667.1| translation initiation factor IF-3 [Propionibacterium acnes HL097PA1] gi|327444369|gb|EGE91023.1| translation initiation factor IF-3 [Propionibacterium acnes HL043PA2] gi|327444566|gb|EGE91220.1| translation initiation factor IF-3 [Propionibacterium acnes HL043PA1] gi|327446238|gb|EGE92892.1| translation initiation factor IF-3 [Propionibacterium acnes HL013PA2] gi|327452177|gb|EGE98831.1| translation initiation factor IF-3 [Propionibacterium acnes HL092PA1] gi|327452810|gb|EGE99464.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA3] gi|327457887|gb|EGF04542.1| translation initiation factor IF-3 [Propionibacterium acnes HL083PA2] gi|328752000|gb|EGF65616.1| translation initiation factor IF-3 [Propionibacterium acnes HL020PA1] gi|328755368|gb|EGF68984.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA1] gi|328757789|gb|EGF71405.1| translation initiation factor IF-3 [Propionibacterium acnes HL025PA2] gi|328760152|gb|EGF73729.1| translation initiation factor IF-3 [Propionibacterium acnes HL099PA1] Length = 213 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|148381086|ref|YP_001255627.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 3502] gi|148290570|emb|CAL84699.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 3502] Length = 173 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 39 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+S ++ PK Sbjct: 99 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELSVMEKAPK 158 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 159 LEGRNMIMILAPR 171 >gi|15802130|ref|NP_288152.1| translation initiation factor IF-3 [Escherichia coli O157:H7 EDL933] gi|26247969|ref|NP_754009.1| translation initiation factor IF-3 [Escherichia coli CFT073] gi|62179923|ref|YP_216340.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|74311962|ref|YP_310381.1| translation initiation factor IF-3 [Shigella sonnei Ss046] gi|82777066|ref|YP_403415.1| translation initiation factor IF-3 [Shigella dysenteriae Sd197] gi|91210932|ref|YP_540918.1| translation initiation factor IF-3 [Escherichia coli UTI89] gi|110641839|ref|YP_669569.1| translation initiation factor IF-3 [Escherichia coli 536] gi|157156228|ref|YP_001463014.1| translation initiation factor IF-3 [Escherichia coli E24377A] gi|157161180|ref|YP_001458498.1| translation initiation factor IF-3 [Escherichia coli HS] gi|161503558|ref|YP_001570670.1| translation initiation factor IF-3 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|168263847|ref|ZP_02685820.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168749465|ref|ZP_02774487.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4113] gi|168756719|ref|ZP_02781726.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4401] gi|168762218|ref|ZP_02787225.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4501] gi|168770479|ref|ZP_02795486.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4486] gi|168774981|ref|ZP_02799988.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4196] gi|168782133|ref|ZP_02807140.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4076] gi|168788114|ref|ZP_02813121.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC869] gi|168800101|ref|ZP_02825108.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC508] gi|170682199|ref|YP_001743531.1| translation initiation factor IF-3 [Escherichia coli SMS-3-5] gi|187732581|ref|YP_001880508.1| translation initiation factor IF-3 [Shigella boydii CDC 3083-94] gi|188493870|ref|ZP_03001140.1| translation initiation factor IF-3 [Escherichia coli 53638] gi|191171642|ref|ZP_03033189.1| translation initiation factor IF-3 [Escherichia coli F11] gi|193065779|ref|ZP_03046842.1| translation initiation factor IF-3 [Escherichia coli E22] gi|193068914|ref|ZP_03049873.1| translation initiation factor IF-3 [Escherichia coli E110019] gi|194428563|ref|ZP_03061102.1| translation initiation factor IF-3 [Escherichia coli B171] gi|194438479|ref|ZP_03070568.1| translation initiation factor IF-3 [Escherichia coli 101-1] gi|194444222|ref|YP_002040591.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450157|ref|YP_002045341.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469320|ref|ZP_03075304.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736284|ref|YP_002114351.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195937402|ref|ZP_03082784.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4024] gi|197251897|ref|YP_002146703.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265146|ref|ZP_03165220.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244931|ref|YP_002215792.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389682|ref|ZP_03216293.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927642|ref|ZP_03218843.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352943|ref|YP_002226744.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857159|ref|YP_002243810.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208810461|ref|ZP_03252337.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4206] gi|208816560|ref|ZP_03257680.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4045] gi|208821686|ref|ZP_03262006.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4042] gi|209399706|ref|YP_002270788.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4115] gi|209919077|ref|YP_002293161.1| translation initiation factor IF-3 [Escherichia coli SE11] gi|217328908|ref|ZP_03444989.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14588] gi|227885860|ref|ZP_04003665.1| translation initiation factor IF-3 [Escherichia coli 83972] gi|237705667|ref|ZP_04536148.1| translation initiation factor IF-3 [Escherichia sp. 3_2_53FAA] gi|238910850|ref|ZP_04654687.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|254161778|ref|YP_003044886.1| translation initiation factor IF-3 [Escherichia coli B str. REL606] gi|261227790|ref|ZP_05942071.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. FRIK2000] gi|261258045|ref|ZP_05950578.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. FRIK966] gi|291282898|ref|YP_003499716.1| Translation initiation factor IF-3 [Escherichia coli O55:H7 str. CB9615] gi|293405217|ref|ZP_06649209.1| translation initiation factor IF-3 [Escherichia coli FVEC1412] gi|293410034|ref|ZP_06653610.1| translation initiation factor IF-3 [Escherichia coli B354] gi|293415036|ref|ZP_06657679.1| translation initiation factor IF-3 [Escherichia coli B185] gi|297518985|ref|ZP_06937371.1| translation initiation factor IF-3 [Escherichia coli OP50] gi|298380860|ref|ZP_06990459.1| translation initiation factor IF-3 [Escherichia coli FVEC1302] gi|300818357|ref|ZP_07098567.1| translation initiation factor IF-3 [Escherichia coli MS 107-1] gi|300821408|ref|ZP_07101555.1| translation initiation factor IF-3 [Escherichia coli MS 119-7] gi|300898494|ref|ZP_07116831.1| translation initiation factor IF-3 [Escherichia coli MS 198-1] gi|300904574|ref|ZP_07122411.1| translation initiation factor IF-3 [Escherichia coli MS 84-1] gi|300917720|ref|ZP_07134369.1| translation initiation factor IF-3 [Escherichia coli MS 115-1] gi|300924760|ref|ZP_07140702.1| translation initiation factor IF-3 [Escherichia coli MS 182-1] gi|300930806|ref|ZP_07146178.1| translation initiation factor IF-3 [Escherichia coli MS 187-1] gi|300938948|ref|ZP_07153649.1| translation initiation factor IF-3 [Escherichia coli MS 21-1] gi|300951318|ref|ZP_07165162.1| translation initiation factor IF-3 [Escherichia coli MS 116-1] gi|300958607|ref|ZP_07170732.1| translation initiation factor IF-3 [Escherichia coli MS 175-1] gi|300987615|ref|ZP_07178287.1| translation initiation factor IF-3 [Escherichia coli MS 200-1] gi|300994419|ref|ZP_07180924.1| translation initiation factor IF-3 [Escherichia coli MS 45-1] gi|301017727|ref|ZP_07182382.1| translation initiation factor IF-3 [Escherichia coli MS 69-1] gi|301050945|ref|ZP_07197794.1| translation initiation factor IF-3 [Escherichia coli MS 185-1] gi|301303994|ref|ZP_07210112.1| translation initiation factor IF-3 [Escherichia coli MS 124-1] gi|301327448|ref|ZP_07220683.1| translation initiation factor IF-3 [Escherichia coli MS 78-1] gi|301647909|ref|ZP_07247686.1| translation initiation factor IF-3 [Escherichia coli MS 146-1] gi|307310712|ref|ZP_07590358.1| translation initiation factor IF-3 [Escherichia coli W] gi|309793488|ref|ZP_07687915.1| translation initiation factor IF-3 [Escherichia coli MS 145-7] gi|331642315|ref|ZP_08343450.1| translation initiation factor IF-3 [Escherichia coli H736] gi|331647209|ref|ZP_08348303.1| translation initiation factor IF-3 [Escherichia coli M605] gi|331653118|ref|ZP_08354123.1| translation initiation factor IF-3 [Escherichia coli M718] gi|331658464|ref|ZP_08359415.1| translation initiation factor IF-3 [Escherichia coli TA206] gi|331663197|ref|ZP_08364107.1| translation initiation factor IF-3 [Escherichia coli TA143] gi|331668403|ref|ZP_08369251.1| translation initiation factor IF-3 [Escherichia coli TA271] gi|331673268|ref|ZP_08374036.1| translation initiation factor IF-3 [Escherichia coli TA280] gi|331677591|ref|ZP_08378266.1| translation initiation factor IF-3 [Escherichia coli H591] gi|331683224|ref|ZP_08383825.1| translation initiation factor IF-3 [Escherichia coli H299] gi|25299583|pir||E85780 Initiation factor IF-3 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12515732|gb|AAG56705.1|AE005395_1 Initiation factor IF-3 [Escherichia coli O157:H7 str. EDL933] gi|26108372|gb|AAN80574.1|AE016761_149 Translation initiation factor IF-3 [Escherichia coli CFT073] gi|16419853|gb|AAL20259.1| protein chain initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127556|gb|AAX65259.1| Translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|73855439|gb|AAZ88146.1| protein chain initiation factor IF-3 [Shigella sonnei Ss046] gi|81241214|gb|ABB61924.1| protein chain initiation factor IF-3 [Shigella dysenteriae Sd197] gi|91072506|gb|ABE07387.1| protein chain initiation factor IF-3 [Escherichia coli UTI89] gi|110343431|gb|ABG69668.1| translation initiation factor IF-3 [Escherichia coli 536] gi|157066860|gb|ABV06115.1| translation initiation factor IF-3 [Escherichia coli HS] gi|157078258|gb|ABV17966.1| translation initiation factor IF-3 [Escherichia coli E24377A] gi|160864905|gb|ABX21528.1| hypothetical protein SARI_01636 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|170519917|gb|ACB18095.1| translation initiation factor IF-3 [Escherichia coli SMS-3-5] gi|187429573|gb|ACD08847.1| translation initiation factor IF-3 [Shigella boydii CDC 3083-94] gi|187769481|gb|EDU33325.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4196] gi|188016209|gb|EDU54331.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4113] gi|188489069|gb|EDU64172.1| translation initiation factor IF-3 [Escherichia coli 53638] gi|189000283|gb|EDU69269.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4076] gi|189356129|gb|EDU74548.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4401] gi|189360632|gb|EDU79051.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4486] gi|189367510|gb|EDU85926.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4501] gi|189372040|gb|EDU90456.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC869] gi|189377612|gb|EDU96028.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC508] gi|190907972|gb|EDV67564.1| translation initiation factor IF-3 [Escherichia coli F11] gi|192926551|gb|EDV81182.1| translation initiation factor IF-3 [Escherichia coli E22] gi|192957709|gb|EDV88153.1| translation initiation factor IF-3 [Escherichia coli E110019] gi|194402885|gb|ACF63107.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408461|gb|ACF68680.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194413441|gb|EDX29724.1| translation initiation factor IF-3 [Escherichia coli B171] gi|194422489|gb|EDX38487.1| translation initiation factor IF-3 [Escherichia coli 101-1] gi|194455684|gb|EDX44523.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711786|gb|ACF91007.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195182908|dbj|BAG66478.1| protein chain initiation factor IF-3 [Escherichia coli O111:H-] gi|197215600|gb|ACH52997.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243401|gb|EDY26021.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939447|gb|ACH76780.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602127|gb|EDZ00673.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322984|gb|EDZ08180.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272724|emb|CAR37640.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205347573|gb|EDZ34204.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708962|emb|CAR33292.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208724977|gb|EDZ74684.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4206] gi|208730903|gb|EDZ79592.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4045] gi|208741809|gb|EDZ89491.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4042] gi|209161106|gb|ACI38539.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4115] gi|209912336|dbj|BAG77410.1| translation initiation factor IF-3 [Escherichia coli SE11] gi|217318255|gb|EEC26682.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14588] gi|222033473|emb|CAP76214.1| Translation initiation factor IF-3 [Escherichia coli LF82] gi|226900424|gb|EEH86683.1| translation initiation factor IF-3 [Escherichia sp. 3_2_53FAA] gi|227837433|gb|EEJ47899.1| translation initiation factor IF-3 [Escherichia coli 83972] gi|253973679|gb|ACT39350.1| translation initiation factor IF-3 [Escherichia coli B str. REL606] gi|253977873|gb|ACT43543.1| translation initiation factor IF-3 [Escherichia coli BL21(DE3)] gi|261246543|emb|CBG24353.1| Translation initiation factor IF-3. Translation initiation factor IF-3, chloroplast [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|281178788|dbj|BAI55118.1| translation initiation factor IF-3 [Escherichia coli SE15] gi|284921638|emb|CBG34710.1| Translation initiation factor IF-3 [Escherichia coli 042] gi|290762771|gb|ADD56732.1| Translation initiation factor IF-3 [Escherichia coli O55:H7 str. CB9615] gi|291427425|gb|EFF00452.1| translation initiation factor IF-3 [Escherichia coli FVEC1412] gi|291432684|gb|EFF05663.1| translation initiation factor IF-3 [Escherichia coli B185] gi|291470502|gb|EFF12986.1| translation initiation factor IF-3 [Escherichia coli B354] gi|294491077|gb|ADE89833.1| translation initiation factor IF-3 [Escherichia coli IHE3034] gi|298278302|gb|EFI19816.1| translation initiation factor IF-3 [Escherichia coli FVEC1302] gi|300297399|gb|EFJ53784.1| translation initiation factor IF-3 [Escherichia coli MS 185-1] gi|300306095|gb|EFJ60615.1| translation initiation factor IF-3 [Escherichia coli MS 200-1] gi|300314732|gb|EFJ64516.1| translation initiation factor IF-3 [Escherichia coli MS 175-1] gi|300357846|gb|EFJ73716.1| translation initiation factor IF-3 [Escherichia coli MS 198-1] gi|300400019|gb|EFJ83557.1| translation initiation factor IF-3 [Escherichia coli MS 69-1] gi|300403487|gb|EFJ87025.1| translation initiation factor IF-3 [Escherichia coli MS 84-1] gi|300406265|gb|EFJ89803.1| translation initiation factor IF-3 [Escherichia coli MS 45-1] gi|300415121|gb|EFJ98431.1| translation initiation factor IF-3 [Escherichia coli MS 115-1] gi|300419048|gb|EFK02359.1| translation initiation factor IF-3 [Escherichia coli MS 182-1] gi|300449415|gb|EFK13035.1| translation initiation factor IF-3 [Escherichia coli MS 116-1] gi|300456147|gb|EFK19640.1| translation initiation factor IF-3 [Escherichia coli MS 21-1] gi|300461364|gb|EFK24857.1| translation initiation factor IF-3 [Escherichia coli MS 187-1] gi|300525911|gb|EFK46980.1| translation initiation factor IF-3 [Escherichia coli MS 119-7] gi|300528997|gb|EFK50059.1| translation initiation factor IF-3 [Escherichia coli MS 107-1] gi|300840791|gb|EFK68551.1| translation initiation factor IF-3 [Escherichia coli MS 124-1] gi|300845960|gb|EFK73720.1| translation initiation factor IF-3 [Escherichia coli MS 78-1] gi|301073966|gb|EFK88772.1| translation initiation factor IF-3 [Escherichia coli MS 146-1] gi|301157871|emb|CBW17365.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|306908890|gb|EFN39386.1| translation initiation factor IF-3 [Escherichia coli W] gi|307553739|gb|ADN46514.1| translation initiation factor IF-3 [Escherichia coli ABU 83972] gi|307626795|gb|ADN71099.1| translation initiation factor IF-3 [Escherichia coli UM146] gi|308123075|gb|EFO60337.1| translation initiation factor IF-3 [Escherichia coli MS 145-7] gi|309701941|emb|CBJ01254.1| Translation initiation factor IF-3 [Escherichia coli ETEC H10407] gi|312912319|dbj|BAJ36293.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|312946319|gb|ADR27146.1| translation initiation factor IF-3 [Escherichia coli O83:H1 str. NRG 857C] gi|315257477|gb|EFU37445.1| translation initiation factor IF-3 [Escherichia coli MS 85-1] gi|315286433|gb|EFU45868.1| translation initiation factor IF-3 [Escherichia coli MS 110-3] gi|315290479|gb|EFU49853.1| translation initiation factor IF-3 [Escherichia coli MS 153-1] gi|315299749|gb|EFU58989.1| translation initiation factor IF-3 [Escherichia coli MS 16-3] gi|320086186|emb|CBY95960.1| Translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|320657808|gb|EFX25570.1| translation initiation factor IF-3 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658383|gb|EFX26077.1| translation initiation factor IF-3 [Escherichia coli O55:H7 str. USDA 5905] gi|320668280|gb|EFX35107.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. LSU-61] gi|322616719|gb|EFY13628.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620022|gb|EFY16895.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622332|gb|EFY19177.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627856|gb|EFY24646.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633046|gb|EFY29789.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636708|gb|EFY33411.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641266|gb|EFY37907.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645255|gb|EFY41784.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650196|gb|EFY46610.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655770|gb|EFY52072.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660096|gb|EFY56335.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665337|gb|EFY61525.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669595|gb|EFY65743.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673521|gb|EFY69623.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677447|gb|EFY73511.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679888|gb|EFY75927.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687360|gb|EFY83332.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714389|gb|EFZ05960.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323192478|gb|EFZ77708.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198667|gb|EFZ83768.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204095|gb|EFZ89109.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208714|gb|EFZ93652.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210227|gb|EFZ95126.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217690|gb|EGA02405.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220244|gb|EGA04699.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223490|gb|EGA07816.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229492|gb|EGA13615.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232715|gb|EGA16811.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240246|gb|EGA24290.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242766|gb|EGA26787.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249082|gb|EGA33001.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254417|gb|EGA38234.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255601|gb|EGA39357.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260122|gb|EGA43747.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267114|gb|EGA50599.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271562|gb|EGA54983.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323937320|gb|EGB33599.1| translation initiation protein IF-3 [Escherichia coli E1520] gi|323940616|gb|EGB36807.1| translation initiation protein IF-3 [Escherichia coli E482] gi|323948092|gb|EGB44083.1| translation initiation protein IF-3 [Escherichia coli H120] gi|323952225|gb|EGB48098.1| translation initiation protein IF-3 [Escherichia coli H252] gi|323956619|gb|EGB52357.1| translation initiation protein IF-3 [Escherichia coli H263] gi|323962101|gb|EGB57697.1| translation initiation protein IF-3 [Escherichia coli H489] gi|323968487|gb|EGB63893.1| translation initiation protein IF-3 [Escherichia coli M863] gi|323973903|gb|EGB69075.1| translation initiation protein IF-3 [Escherichia coli TA007] gi|323978099|gb|EGB73185.1| translation initiation protein IF-3 [Escherichia coli TW10509] gi|324007093|gb|EGB76312.1| translation initiation factor IF-3 [Escherichia coli MS 57-2] gi|324011502|gb|EGB80721.1| translation initiation factor IF-3 [Escherichia coli MS 60-1] gi|324016471|gb|EGB85690.1| translation initiation factor IF-3 [Escherichia coli MS 117-3] gi|324113469|gb|EGC07444.1| translation initiation protein IF-3 [Escherichia fergusonii B253] gi|324119203|gb|EGC13091.1| translation initiation protein IF-3 [Escherichia coli E1167] gi|326628017|gb|EGE34360.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|331039113|gb|EGI11333.1| translation initiation factor IF-3 [Escherichia coli H736] gi|331043992|gb|EGI16128.1| translation initiation factor IF-3 [Escherichia coli M605] gi|331049216|gb|EGI21288.1| translation initiation factor IF-3 [Escherichia coli M718] gi|331054420|gb|EGI26440.1| translation initiation factor IF-3 [Escherichia coli TA206] gi|331058996|gb|EGI30973.1| translation initiation factor IF-3 [Escherichia coli TA143] gi|331063597|gb|EGI35508.1| translation initiation factor IF-3 [Escherichia coli TA271] gi|331069466|gb|EGI40853.1| translation initiation factor IF-3 [Escherichia coli TA280] gi|331074051|gb|EGI45371.1| translation initiation factor IF-3 [Escherichia coli H591] gi|331079439|gb|EGI50636.1| translation initiation factor IF-3 [Escherichia coli H299] gi|332988222|gb|AEF07205.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] gi|333006571|gb|EGK26071.1| translation initiation factor IF-3 [Shigella flexneri K-272] gi|333018790|gb|EGK38083.1| translation initiation factor IF-3 [Shigella flexneri K-227] Length = 144 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|15831679|ref|NP_310452.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. Sakai] gi|16129674|ref|NP_416233.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] gi|89108558|ref|AP_002338.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. W3110] gi|170019933|ref|YP_001724887.1| translation initiation factor IF-3 [Escherichia coli ATCC 8739] gi|215486937|ref|YP_002329368.1| translation initiation factor IF-3 [Escherichia coli O127:H6 str. E2348/69] gi|238900933|ref|YP_002926729.1| protein chain initiation factor IF-3 [Escherichia coli BW2952] gi|253773327|ref|YP_003036158.1| translation initiation factor IF-3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793335|ref|YP_003078172.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14359] gi|260844070|ref|YP_003221848.1| protein chain initiation factor IF-3 [Escherichia coli O103:H2 str. 12009] gi|260855584|ref|YP_003229475.1| protein chain initiation factor IF-3 [Escherichia coli O26:H11 str. 11368] gi|260868245|ref|YP_003234647.1| protein chain initiation factor IF-3 [Escherichia coli O111:H- str. 11128] gi|332279131|ref|ZP_08391544.1| chain initiation factor IF-3 [Shigella sp. D9] gi|67466073|sp|P0A707|IF3_ECOLI RecName: Full=Translation initiation factor IF-3; Contains: RecName: Full=Translation initiation factor IF-3, N-terminally processed; Contains: RecName: Full=Translation initiation factor IF-3S gi|67466074|sp|P0A708|IF3_ECOL6 RecName: Full=Translation initiation factor IF-3 gi|67466075|sp|P0A709|IF3_ECO57 RecName: Full=Translation initiation factor IF-3 gi|189028353|sp|B1IPL0|IF3_ECOLC RecName: Full=Translation initiation factor IF-3 gi|254803487|sp|B7USA1|IF3_ECO27 RecName: Full=Translation initiation factor IF-3 gi|259491505|sp|C4ZYI0|IF3_ECOBW RecName: Full=Translation initiation factor IF-3 gi|43067|emb|CAA23561.1| unnamed protein product [Escherichia coli] gi|1742797|dbj|BAA15485.1| protein chain initiation factor IF-3 [Escherichia coli str. K12 substr. W3110] gi|1788012|gb|AAC74788.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] gi|13361892|dbj|BAB35848.1| protein chain initiation factor IF-3 [Escherichia coli O157:H7 str. Sakai] gi|169754861|gb|ACA77560.1| translation initiation factor IF-3 [Escherichia coli ATCC 8739] gi|209768838|gb|ACI82731.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768840|gb|ACI82732.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768842|gb|ACI82733.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768844|gb|ACI82734.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768846|gb|ACI82735.1| protein chain initiation factor IF-3 [Escherichia coli] gi|215265009|emb|CAS09395.1| protein chain initiation factor IF-3 [Escherichia coli O127:H6 str. E2348/69] gi|238863300|gb|ACR65298.1| protein chain initiation factor IF-3 [Escherichia coli BW2952] gi|242377441|emb|CAQ32193.1| protein chain initiation factor IF-3 [Escherichia coli BL21(DE3)] gi|253324371|gb|ACT28973.1| translation initiation factor IF-3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254592735|gb|ACT72096.1| protein chain initiation factor IF-3 [Escherichia coli O157:H7 str. TW14359] gi|257754233|dbj|BAI25735.1| protein chain initiation factor IF-3 [Escherichia coli O26:H11 str. 11368] gi|257759217|dbj|BAI30714.1| protein chain initiation factor IF-3 [Escherichia coli O103:H2 str. 12009] gi|257764601|dbj|BAI36096.1| protein chain initiation factor IF-3 [Escherichia coli O111:H- str. 11128] gi|260449159|gb|ACX39581.1| translation initiation factor IF-3 [Escherichia coli DH1] gi|315061023|gb|ADT75350.1| protein chain initiation factor IF-3 [Escherichia coli W] gi|315136358|dbj|BAJ43517.1| protein chain initiation factor IF-3 [Escherichia coli DH1] gi|323378406|gb|ADX50674.1| translation initiation factor IF-3 [Escherichia coli KO11] gi|332101483|gb|EGJ04829.1| chain initiation factor IF-3 [Shigella sp. D9] Length = 180 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|327439266|dbj|BAK15631.1| translation initiation factor 3 [Solibacillus silvestris StLB046] Length = 213 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + P V +++D K ++ QK E RK K +KEV++ P I Sbjct: 77 LEIAARANLDLVLVAPQAKPPVARVMDYGKFKFDQQKKDREIRKNSKVIVMKEVRLSPTI 136 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 137 DEHDFQTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKP 196 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L K Sbjct: 197 KMEGRSMFLVLQPKT 211 >gi|220903767|ref|YP_002479079.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868066|gb|ACL48401.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 176 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 88/132 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP D Sbjct: 44 MAKEAGMDLVEVSSNSEPPVCRIMDYGKFKYEQQKKKQEAKKRQAVVQIKEIKVRPKTDD 103 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K++ I FL +G + KI+V FRGREI+H+D G +L + + +I+R+D EP+ Sbjct: 104 HDYETKVRHIRRFLEEGDRCKITVFFRGREIVHKDRGIAILERVVQDLADIARVDQEPRA 163 Query: 123 EGRQMIMILSSK 134 EGR + M+L K Sbjct: 164 EGRTLQMMLVPK 175 >gi|126659821|ref|ZP_01730947.1| initiation factor IF-3 [Cyanothece sp. CCY0110] gi|126618878|gb|EAZ89621.1| initiation factor IF-3 [Cyanothece sp. CCY0110] Length = 183 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 78/131 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLVE+ + +P VCKI+D K +Y +QK A+K + +KEVK+R Sbjct: 50 IDIAQEVGLDLVEVAPNASPPVCKIIDYGKFKYELQKKESLAKKNRTENTLKEVKLRYCT 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D DL KL+ FL +G KVK S++FRGRE LGRE L NI +R +++ D Sbjct: 110 DTGDLNTKLRQARKFLENGSKVKFSMRFRGRERAFMKLGREKLDNIVDRLSDVANQDGNS 169 Query: 121 KFEGRQMIMIL 131 + G Q+ +IL Sbjct: 170 NYNGHQLSIIL 180 >gi|126652713|ref|ZP_01724874.1| translation initiation factor IF-3 [Bacillus sp. B14905] gi|126590562|gb|EAZ84680.1| translation initiation factor IF-3 [Bacillus sp. B14905] Length = 167 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIAARVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+D+G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|194435149|ref|ZP_03067383.1| translation initiation factor IF-3 [Shigella dysenteriae 1012] gi|194416613|gb|EDX32748.1| translation initiation factor IF-3 [Shigella dysenteriae 1012] Length = 144 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|153933561|ref|YP_001385459.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 19397] gi|153934650|ref|YP_001388866.1| translation initiation factor IF-3 [Clostridium botulinum A str. Hall] gi|182701650|ref|ZP_02613878.2| translation initiation factor IF-3 [Clostridium botulinum NCTC 2916] gi|226950567|ref|YP_002805658.1| translation initiation factor IF-3 [Clostridium botulinum A2 str. Kyoto] gi|152929605|gb|ABS35105.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 19397] gi|152930564|gb|ABS36063.1| translation initiation factor IF-3 [Clostridium botulinum A str. Hall] gi|182670018|gb|EDT81994.1| translation initiation factor IF-3 [Clostridium botulinum NCTC 2916] gi|226843624|gb|ACO86290.1| translation initiation factor IF-3 [Clostridium botulinum A2 str. Kyoto] Length = 184 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+S ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELSVMEKAPK 169 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPR 182 >gi|317057703|ref|YP_004106170.1| translation initiation factor IF-3 [Ruminococcus albus 7] gi|315449972|gb|ADU23536.1| translation initiation factor IF-3 [Ruminococcus albus 7] Length = 174 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLV+I TP VCKI+D K + QK E RK QK IKE++M I Sbjct: 38 LKIAFEKDLDLVKIAPQATPPVCKIMDYGKFLFEQQKREKEQRKNQKVIEIKEIRMSSTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G K+K+SV+FR R + H G ELL KE E+ +D Sbjct: 98 DTHDFDTKVNQAIKFLKGGDKLKVSVRFRKRTVAHPQFGEELLVKFKEAVSEVGVVDKPS 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR ++M ++ K Sbjct: 158 KMEGRSLVMFVAPKA 172 >gi|322419730|ref|YP_004198953.1| translation initiation factor IF-3 [Geobacter sp. M18] gi|320126117|gb|ADW13677.1| translation initiation factor IF-3 [Geobacter sp. M18] Length = 177 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 41 LALAESLQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKQAEAKKKQVQVELKEVKLRPKT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 101 DVHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFAAELADIALVEVRQ 160 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 161 KMEGRSMFMIVAPKV 175 >gi|154249347|ref|YP_001410172.1| translation initiation factor IF-3 [Fervidobacterium nodosum Rt17-B1] gi|154153283|gb|ABS60515.1| translation initiation factor IF-3 [Fervidobacterium nodosum Rt17-B1] Length = 176 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDL+ + + P V +ILD K +Y + K +A++ QK +KE+K RPVI Sbjct: 41 IDLAKSKGLDLILVAPNAQPPVARILDYGKYKYELAKREQKAKRNQKIIEVKEMKFRPVI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK I FL +G KVK++V FRGRE+ + G+E+L I +I ++ E Sbjct: 101 NEHDYQTKLKHIKRFLSEGNKVKVTVMFRGRELAFVEKGKEILDRISNDIADIGSVEKEA 160 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M M+L K + Sbjct: 161 KMEGRDMWMVLKPKNL 176 >gi|300858362|ref|YP_003783345.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis FRC41] gi|300685816|gb|ADK28738.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis FRC41] gi|302206077|gb|ADL10419.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis C231] gi|302330630|gb|ADL20824.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis 1002] gi|308276315|gb|ADO26214.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis I19] Length = 148 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + + ++ +PK Sbjct: 71 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVADFGIVETKPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 131 QDGRNMTMVFGP 142 >gi|156346163|ref|XP_001621458.1| hypothetical protein NEMVEDRAFT_v1g231409 [Nematostella vectensis] gi|156207414|gb|EDO29358.1| predicted protein [Nematostella vectensis] Length = 177 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A LDLV+I S P VCK++D K +Y +K E +KKQ T IKE+K RP Sbjct: 42 LELAQQAELDLVQISDS-DPIVCKLMDFGKFQYEQKKKQAEVKKKQHQTQIKEMKFRPAT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K++++FRGRE+ HQDLG +L+ I+ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEAGDKAKVTLRFRGREMAHQDLGMQLMERIENDLQEQGVVEQRP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 161 KMEGRQMVMVIAPK 174 >gi|167771640|ref|ZP_02443693.1| hypothetical protein ANACOL_03012 [Anaerotruncus colihominis DSM 17241] gi|167666280|gb|EDS10410.1| hypothetical protein ANACOL_03012 [Anaerotruncus colihominis DSM 17241] Length = 232 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 MA E N+DLV+I TP VCKI+D K ++ K EARK QK IKE+++ ID Sbjct: 88 NMAIEKNMDLVKIAPQATPPVCKIMDYGKFKFEQAKREKEARKNQKVIEIKEIRLSLNID 147 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D K+ FL G KVK +++FRGRE+ H +LG ++ E E ++ PK Sbjct: 148 TNDFNTKVNRAIKFLEGGDKVKAALRFRGREMAHPELGTNIMKRFTEAVAEYGNVEKLPK 207 Query: 122 FEGRQMIMILSSKCV 136 EGR M+M +S K V Sbjct: 208 MEGRSMVMFISPKPV 222 >gi|284928971|ref|YP_003421493.1| translation initiation factor 3 [cyanobacterium UCYN-A] gi|284809430|gb|ADB95135.1| bacterial translation initiation factor 3 (bIF-3) [cyanobacterium UCYN-A] Length = 179 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LNTAQEQELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L +ELLS + E++ I P Sbjct: 102 DEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHANLAQELLSRMAADLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPK 175 >gi|291295603|ref|YP_003507001.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279] gi|290470562|gb|ADD27981.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279] Length = 173 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLV + + P V ++LD K RY Q+ EARKK K T +K +K+RP I Sbjct: 23 LRMAKEREYDLVLVSPNSVPPVARLLDYGKWRYEQQQAEKEARKKAKRTELKSMKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL I FL +G KVK+++ FRGRE+ HQ+LG +LL + + + ++ P Sbjct: 83 ETHDYNTKLSHIRRFLEEGHKVKVTIMFRGREMAHQELGYKLLERVAKDLEGVGFVEMRP 142 Query: 121 KFEGRQMIMILS 132 + GR M M+++ Sbjct: 143 EMLGRDMNMVMA 154 >gi|16760561|ref|NP_456178.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141678|ref|NP_805020.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|20138479|sp|Q8Z6I3|IF3_SALTI RecName: Full=Translation initiation factor IF-3 gi|25299576|pir||AB0706 translation initiation factor IF-3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502857|emb|CAD02019.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29137306|gb|AAO68869.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 180 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|222110647|ref|YP_002552911.1| translation initiation factor if-3 [Acidovorax ebreus TPSY] gi|221730091|gb|ACM32911.1| translation initiation factor IF-3 [Acidovorax ebreus TPSY] Length = 178 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ +++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLNRLRDDLGDTILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|302528048|ref|ZP_07280390.1| translation initiation factor IF-3 [Streptomyces sp. AA4] gi|302436943|gb|EFL08759.1| translation initiation factor IF-3 [Streptomyces sp. AA4] Length = 201 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V K++D K +Y + A ++R+ Q T IKE K+RP I Sbjct: 52 LRLAQEADLDLVEVAPQARPPVAKLMDFGKFKYESAQKARDSRRNQHLTVIKEQKLRPKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ P Sbjct: 112 DQHDYETKKGHVSRFLAAGNKVKVTIMFRGREQSRPELGFRLLQKLADDVTELGFVESSP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 172 KQDGRNMIMVLAP 184 >gi|160934430|ref|ZP_02081817.1| hypothetical protein CLOLEP_03303 [Clostridium leptum DSM 753] gi|156867103|gb|EDO60475.1| hypothetical protein CLOLEP_03303 [Clostridium leptum DSM 753] Length = 203 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 76/131 (58%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E NLDLV+I P VCKI+D K R+ K EARK Q IKE+++ ID H Sbjct: 70 AAEKNLDLVKISPMAKPPVCKIMDYGKYRFEQAKREKEARKNQHIVDIKEIRLSLNIDTH 129 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL F+ +G KVK+S++FRGRE+ H +LG E++ + E + I+ K E Sbjct: 130 DFNTKLGHAKRFISEGDKVKVSIRFRGREMGHPELGYEIMRKFADSCAEFANIEKPAKLE 189 Query: 124 GRQMIMILSSK 134 GR M+M L+ K Sbjct: 190 GRNMLMFLAPK 200 >gi|283785058|ref|YP_003364923.1| translation initiation factor if-3 [Citrobacter rodentium ICC168] gi|282948512|emb|CBG88101.1| translation initiation factor if-3 [Citrobacter rodentium ICC168] Length = 180 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|313808092|gb|EFS46569.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA2] Length = 278 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 85 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 144 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 145 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 204 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 205 KQEGRNMLMILAP 217 >gi|38233750|ref|NP_939517.1| translation initiation factor IF-3 [Corynebacterium diphtheriae NCTC 13129] gi|38200011|emb|CAE49680.1| translation initiation factor IF-3 [Corynebacterium diphtheriae] Length = 167 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 30 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ +PK Sbjct: 90 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAGDVAEYGIVESKPK 149 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 150 QDGRNMTMVFGP 161 >gi|156934291|ref|YP_001438207.1| translation initiation factor IF-3 [Cronobacter sakazakii ATCC BAA-894] gi|156532545|gb|ABU77371.1| hypothetical protein ESA_02122 [Cronobacter sakazakii ATCC BAA-894] Length = 144 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 90/132 (68%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP D Sbjct: 10 AEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P K Sbjct: 70 DYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKI 129 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L+ K Sbjct: 130 EGRQMIMVLAPK 141 >gi|313680891|ref|YP_004058630.1| bacterial translation initiation factor 3 (bif-3) [Oceanithermus profundus DSM 14977] gi|313153606|gb|ADR37457.1| bacterial translation initiation factor 3 (bIF-3) [Oceanithermus profundus DSM 14977] Length = 205 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +LDLV + + +P V K+LD K RY Q+ EARKK K +K +K R I Sbjct: 45 LDLAKQKDLDLVLVGPTASPPVAKLLDYGKWRYEQQQAEKEARKKAKRQEMKSIKFRVKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL + FL G KVK+++ FRGRE+ H +LG+++L + E EI+ ++ +P Sbjct: 105 DEHDYQTKLGHVRRFLEAGHKVKVTIMFRGREMAHPELGKKILDRVAEDLSEIAVVEMKP 164 Query: 121 KFEGRQMIMILSS 133 GR M M+L+ Sbjct: 165 LMAGRDMNMVLAP 177 >gi|197301819|ref|ZP_03166889.1| hypothetical protein RUMLAC_00546 [Ruminococcus lactaris ATCC 29176] gi|197299259|gb|EDY33789.1| hypothetical protein RUMLAC_00546 [Ruminococcus lactaris ATCC 29176] Length = 164 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K +Y + EA+KKQ++ IKEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPGAKPPVCKIIDYGKYKYEQTRKEKEAKKKQRTVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + + +++ ++ Sbjct: 90 DTNDLNTKMNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAKMLEDVAVVEKAA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ + Sbjct: 150 KLEGRNMSMVLTER 163 >gi|160900047|ref|YP_001565629.1| translation initiation factor IF-3 [Delftia acidovorans SPH-1] gi|160365631|gb|ABX37244.1| translation initiation factor IF-3 [Delftia acidovorans SPH-1] Length = 205 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ TP VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAATATPPVCRLMDYGKFKYLEQKKAAEAKAKQTVIEIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ +G +LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQIGLDLLNRLRDDLADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 169 KLEGRQMVMMIAP 181 >gi|53728890|ref|ZP_00134599.2| COG0290: Translation initiation factor 3 (IF-3) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207711|ref|YP_001052936.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae L20] gi|307249436|ref|ZP_07531425.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|126096503|gb|ABN73331.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306858510|gb|EFM90577.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 159 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D Sbjct: 26 AEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQMKEIKFRPGTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P K Sbjct: 86 DYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAPGKL 145 Query: 123 EGRQMIMILSSK 134 EGRQ +M+++ K Sbjct: 146 EGRQAVMVIAPK 157 >gi|213161900|ref|ZP_03347610.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423450|ref|ZP_03356433.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426330|ref|ZP_03359080.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582473|ref|ZP_03364299.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213619334|ref|ZP_03373160.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650866|ref|ZP_03380919.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852223|ref|ZP_03381755.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289809608|ref|ZP_06540237.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 144 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|256843629|ref|ZP_05549117.1| translation initiation factor IF-3 [Lactobacillus crispatus 125-2-CHN] gi|256850105|ref|ZP_05555535.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-1A-US] gi|262047393|ref|ZP_06020350.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-3A-US] gi|293380738|ref|ZP_06626786.1| translation initiation factor IF-3 [Lactobacillus crispatus 214-1] gi|256615049|gb|EEU20250.1| translation initiation factor IF-3 [Lactobacillus crispatus 125-2-CHN] gi|256713077|gb|EEU28068.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-1A-US] gi|260572367|gb|EEX28930.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-3A-US] gi|290922702|gb|EFD99656.1| translation initiation factor IF-3 [Lactobacillus crispatus 214-1] Length = 150 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 8 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 67 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 68 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEVTSDIANVISK 127 Query: 120 PKFEGRQMIMILS 132 PK EGR M ++L+ Sbjct: 128 PKMEGRSMFLMLA 140 >gi|172039441|ref|YP_001805942.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] gi|171700895|gb|ACB53876.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] Length = 183 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 79/131 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA LDLVE+ + +P VCKI+D K +Y +QK A+K + +KEVK+R Sbjct: 50 IDIAQEAGLDLVEVAPNASPPVCKIIDYGKFKYELQKKESLAKKNRTENTLKEVKLRYCT 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D DL KL+ FL +G KVK S++FRGRE LGRE L +I +R +++ D Sbjct: 110 DTGDLNTKLRQARKFLNNGSKVKFSMRFRGRERAFMKLGREKLDHIVDRLSDVASQDGNS 169 Query: 121 KFEGRQMIMIL 131 + G Q+ +IL Sbjct: 170 NYNGHQLSIIL 180 >gi|121594740|ref|YP_986636.1| translation initiation factor 3 [Acidovorax sp. JS42] gi|120606820|gb|ABM42560.1| bacterial translation initiation factor 3 (bIF-3) [Acidovorax sp. JS42] Length = 205 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 51 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ +++ G+ ++ P Sbjct: 111 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLNRLRDDLGDTILVEQFP 170 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 171 KLEGRQMIMMIAP 183 >gi|256850832|ref|ZP_05556221.1| translation initiation factor IF-3 [Lactobacillus jensenii 27-2-CHN] gi|260661043|ref|ZP_05861957.1| translation initiation factor IF-3 [Lactobacillus jensenii 115-3-CHN] gi|282934499|ref|ZP_06339754.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|297205705|ref|ZP_06923100.1| translation initiation factor IF3 [Lactobacillus jensenii JV-V16] gi|256615894|gb|EEU21082.1| translation initiation factor IF-3 [Lactobacillus jensenii 27-2-CHN] gi|260547980|gb|EEX23956.1| translation initiation factor IF-3 [Lactobacillus jensenii 115-3-CHN] gi|281301446|gb|EFA93735.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|297148831|gb|EFH29129.1| translation initiation factor IF3 [Lactobacillus jensenii JV-V16] Length = 158 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A+LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 18 LNQAADADLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KL + FL ++G KV++S++FRGR I H +LG ++L + + +I+ + + Sbjct: 78 EGNDFDTKLNHVRKFLSKEGAKVRVSIRFRGRAITHTELGLKVLEKMADATKDIANVTAK 137 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 138 PKMEGRSMFLMLAPKS 153 >gi|227877778|ref|ZP_03995811.1| translational initiation factor IF3 [Lactobacillus crispatus JV-V01] gi|227862637|gb|EEJ70123.1| translational initiation factor IF3 [Lactobacillus crispatus JV-V01] Length = 149 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEVTSDIANVISK 126 Query: 120 PKFEGRQMIMILS 132 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLA 139 >gi|33242359|ref|NP_877300.1| translation initiation factor IF-3 [Chlamydophila pneumoniae TW-183] gi|33236870|gb|AAP98957.1| translation initiation factor IF-3 [Chlamydophila pneumoniae TW-183] Length = 152 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 1 MDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYGLTKKEKDSKKAQHQVRIKEVKLKPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 61 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 120 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 121 KLAGRSLICVVAPGTV 136 >gi|462400|sp|P33320|IF3_SERMA RecName: Full=Translation initiation factor IF-3 gi|152835|gb|AAC36813.1| translation initiation factor IF3 [Serratia marcescens] Length = 183 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +++QK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKEEQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K KI+++FRG E+ HQ +G E+L+ +++ E ++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGPEMAHQQIGMEVLNPLRKDLCEDMDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPK 180 >gi|240168026|ref|ZP_04746685.1| translation initiation factor IF-3 [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 59 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 119 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETAP 178 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 179 KQDGRNMTMVLAP 191 >gi|269215921|ref|ZP_06159775.1| translation initiation factor IF-3 [Slackia exigua ATCC 700122] gi|269130180|gb|EEZ61258.1| translation initiation factor IF-3 [Slackia exigua ATCC 700122] Length = 192 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLVEI + P VC+I+D K +Y A +ARK Q IKE+K RP I Sbjct: 39 LRIAETEGLDLVEIAPNANPPVCRIMDYGKFKYDQAIRAKQARKNQTKVEIKEMKFRPKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D K K + FL DG KVKI++ FRGRE+ H + G +L + + +++ I+ P Sbjct: 99 DIGDYTTKKKHVLRFLADGAKVKITIMFRGREMAHPEQGLSILERLADDLKDVAVIESAP 158 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 159 KMEGRNMHMMIAP 171 >gi|297538937|ref|YP_003674706.1| translation initiation factor IF-3 [Methylotenera sp. 301] gi|297258284|gb|ADI30129.1| translation initiation factor IF-3 [Methylotenera sp. 301] Length = 154 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLVEI + P VC+++D K +Y K E + KQK +KE+K RP D D + Sbjct: 24 DIDLVEIAPNAVPPVCRLMDYGKFKYAESKKQHEVKLKQKQVQVKEIKFRPGTDDGDYAI 83 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K++ I F+ DG K KI+++FRGREI HQ+ G LL ++ E++ ++ PK EGRQM Sbjct: 84 KVRNIIRFIEDGDKAKITLRFRGREITHQEFGLALLRRVEADTKEVALVEQFPKMEGRQM 143 Query: 128 IMILSS 133 +M+L Sbjct: 144 VMVLGP 149 >gi|257455910|ref|ZP_05621127.1| translation initiation factor IF-3 [Enhydrobacter aerosaccus SK60] gi|257446656|gb|EEV21682.1| translation initiation factor IF-3 [Enhydrobacter aerosaccus SK60] Length = 143 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A++A LDLVEI P V K++D RK Y ++ A EA+K QK T +KE+K+RP Sbjct: 7 LQAARDAELDLVEIVPDAQPPVAKVMDYRKYLYDQKQKAKEAKKNQKQTQLKEIKLRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL D KVK++++FRGRE+ HQ +G + L + +++ ++ +P Sbjct: 67 EEADYQVKLRKIREFLEDQDKVKVTIRFRGREMAHQQIGLQQLEKVIADTTDVANVEQQP 126 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 127 KVEGRQMGMLLGP 139 >gi|189499157|ref|YP_001958627.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides BS1] gi|226707354|sp|B3EKG8|IF3_CHLPB RecName: Full=Translation initiation factor IF-3 gi|189494598|gb|ACE03146.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides BS1] Length = 202 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 81/131 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDL+E+ + TP VCK+ + KL+Y + KN + +KK K T +KE++ P Sbjct: 44 IKMAEQEGLDLIEVQPTATPPVCKMDNYGKLQYKLDKNDRDRKKKSKPTSLKELRFHPNT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FLR G +V+ +V F GR I+++D G EL+ + ER +S + P Sbjct: 104 DKHDFDFKAAHLEEFLRKGNRVRATVVFLGRSIIYKDKGYELVERLTERLSTVSNREGSP 163 Query: 121 KFEGRQMIMIL 131 KFEG+++ + Sbjct: 164 KFEGKKLFVYF 174 >gi|237737796|ref|ZP_04568277.1| translation initiation factor 3 [Fusobacterium mortiferum ATCC 9817] gi|229419676|gb|EEO34723.1| translation initiation factor 3 [Fusobacterium mortiferum ATCC 9817] Length = 172 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVEI ++ P VCKI+D K RY + A EA+K QK T +KEVK+ I Sbjct: 40 LELARQEGLDLVEIAATAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQTVVKEVKVTARI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I FL KVK+++ GRE MH LG + L I E+F EI+ D Sbjct: 100 DSHDLETKMSQIKKFLEKENKVKVTLVLFGREKMHATLGVDTLDEIAEKFAEIAEAD--K 157 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 158 KYNDKQKHIILSPK 171 >gi|255324637|ref|ZP_05365754.1| translation initiation factor IF-3 [Corynebacterium tuberculostearicum SK141] gi|255298543|gb|EET77843.1| translation initiation factor IF-3 [Corynebacterium tuberculostearicum SK141] Length = 156 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 19 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 79 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 138 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 139 QDGRNMTMVLGP 150 >gi|212704421|ref|ZP_03312549.1| hypothetical protein DESPIG_02476 [Desulfovibrio piger ATCC 29098] gi|212672142|gb|EEB32625.1| hypothetical protein DESPIG_02476 [Desulfovibrio piger ATCC 29098] Length = 176 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP Sbjct: 42 IALAKEAGMDLVEVASTSEPPVCRIMDYGKFKYEQQKKKQEAKKRQSVVQIKEIKVRPKT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KL+ I FL DG + K++V FRGREI+H+D G +L + + +++++D EP Sbjct: 102 DDHDYETKLRHIRRFLEDGDRCKVTVFFRGREIVHKDRGISILERVVQDLADVAKVDQEP 161 Query: 121 KFEGRQMIMILSSK 134 + EGR + M+L K Sbjct: 162 RAEGRTLQMLLVPK 175 >gi|256830759|ref|YP_003159487.1| translation initiation factor IF-3 [Desulfomicrobium baculatum DSM 4028] gi|256579935|gb|ACU91071.1| translation initiation factor IF-3 [Desulfomicrobium baculatum DSM 4028] Length = 173 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + P VCKI+D K Y +K + EA+K+Q +KE+K RP Sbjct: 37 LEQAEAKGLDLVEVAPNAKPPVCKIMDYGKYLYEEKKKSQEAKKRQTQIQVKEIKFRPHT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K I F+ DG + K++V FRGRE+ H+D G+ +L I E ++++++ Sbjct: 97 DDHDLMTKIKHIRRFIEDGDRCKVTVFFRGREMAHKDRGQVILDRIVEMVSDVAKVEQTS 156 Query: 121 KFEGRQMIMILSS 133 + EGR M ++L+ Sbjct: 157 RVEGRTMFLLLAG 169 >gi|332288527|ref|YP_004419379.1| translation initiation factor IF-3 [Gallibacterium anatis UMN179] gi|330431423|gb|AEC16482.1| translation initiation factor IF-3 [Gallibacterium anatis UMN179] Length = 154 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VC+I++ K Y K A E +KKQK +KEVK RP Sbjct: 18 LELAEQTDLDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L IK E++ ++ EP Sbjct: 78 DEGDYQVKLRSLIRFLEDGDKTKITLRFRGRELAHQQIGIEMLDRIKADLAELAVVESEP 137 Query: 121 -KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 SKIEGRQMVMVLAPK 152 >gi|317495087|ref|ZP_07953458.1| translation initiation factor IF-3 [Gemella moribillum M424] gi|316914794|gb|EFV36269.1| translation initiation factor IF-3 [Gemella moribillum M424] Length = 175 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ +LD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERLSLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKEKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPK 172 >gi|304408773|ref|ZP_07390394.1| translation initiation factor IF-3 [Shewanella baltica OS183] gi|307302776|ref|ZP_07582531.1| translation initiation factor IF-3 [Shewanella baltica BA175] gi|304352594|gb|EFM16991.1| translation initiation factor IF-3 [Shewanella baltica OS183] gi|306913136|gb|EFN43558.1| translation initiation factor IF-3 [Shewanella baltica BA175] Length = 134 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/132 (48%), Positives = 88/132 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 1 MADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 61 NDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 121 EGRQAIMVLAPK 132 >gi|311740496|ref|ZP_07714323.1| translation initiation factor IF3 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304016|gb|EFQ80092.1| translation initiation factor IF3 [Corynebacterium pseudogenitalium ATCC 33035] Length = 148 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|108759780|ref|YP_628849.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622] gi|1352320|sp|P48516|IF3_MYXXA RecName: Full=Translation initiation factor IF-3 gi|123248162|sp|Q1DES4|IF3_MYXXD RecName: Full=Translation initiation factor IF-3 gi|436165|gb|AAC13748.1| Dsg [Myxococcus xanthus] gi|108463660|gb|ABF88845.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622] Length = 247 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 82/129 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLVEI +P VCKI+D K +Y +K A EA++ Q + +KEVK+RP + H Sbjct: 48 ARTEGLDLVEISPMASPPVCKIMDYGKFKYEEKKKASEAKRAQVTVLLKEVKLRPKTEEH 107 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D + K++ F+ DG K K+ ++FRGREI H++ G +L ++ + +++ ++ P+ E Sbjct: 108 DYEFKVRNTRRFIEDGNKAKVVIQFRGREITHREQGTAILDDVAKDLKDVAVVEQMPRME 167 Query: 124 GRQMIMILS 132 GR M MIL+ Sbjct: 168 GRLMFMILA 176 >gi|299535483|ref|ZP_07048805.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1] gi|298729244|gb|EFI69797.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1] Length = 167 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIATRVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|225375382|ref|ZP_03752603.1| hypothetical protein ROSEINA2194_01007 [Roseburia inulinivorans DSM 16841] gi|225212871|gb|EEG95225.1| hypothetical protein ROSEINA2194_01007 [Roseburia inulinivorans DSM 16841] Length = 181 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KE+++ P I Sbjct: 47 MKLAEEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVVELKEIRLSPNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+DL K+ A FL G KVKI+++FRGRE+ H + + +L + E + + ++ P Sbjct: 107 DLNDLNTKMNAAKKFLSKGDKVKITLRFRGREMAHMNASKHILDDFAESLSDTAVVEKAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 167 KVEGRSISMVLAEK 180 >gi|89898050|ref|YP_515160.1| translation initiation factor IF-3 [Chlamydophila felis Fe/C-56] gi|89331422|dbj|BAE81015.1| translation initiation factor IF-3 [Chlamydophila felis Fe/C-56] Length = 186 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + ++ ++ EP Sbjct: 95 DENDFSTKLKQARSFIEKGNKVKITCMFRGRELAYPEHGHKVVQKMSQGLEDVGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVVAPGTV 170 >gi|328466428|gb|EGF37576.1| translation initiation factor IF-3 [Listeria monocytogenes 1816] Length = 146 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 10 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 70 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 129 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 130 KMDGRSMFLVLAP 142 >gi|266625013|ref|ZP_06117948.1| translation initiation factor IF-3 [Clostridium hathewayi DSM 13479] gi|288863093|gb|EFC95391.1| translation initiation factor IF-3 [Clostridium hathewayi DSM 13479] Length = 164 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LQMAKEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H R +L + + +I+ ID Sbjct: 90 DTNDLNTKMGAARKFLEKGDKVKVTLRFRGREMAHMSKSRYILEDFAKELADIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 150 KVEGRSMVMFLTPK 163 >gi|227505046|ref|ZP_03935095.1| translation initiation factor IF-3 [Corynebacterium striatum ATCC 6940] gi|227198410|gb|EEI78458.1| translation initiation factor IF-3 [Corynebacterium striatum ATCC 6940] Length = 148 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVAKIMDHGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E E ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAEDVAEYGIVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|315282775|ref|ZP_07871105.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120] gi|313613579|gb|EFR87393.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120] Length = 189 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 53 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 113 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 172 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLA 184 >gi|32490831|ref|NP_871085.1| hypothetical protein WGLp082 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340172|sp|Q8D3B9|IF3_WIGBR RecName: Full=Translation initiation factor IF-3 gi|25166037|dbj|BAC24228.1| infC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 196 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 1/130 (0%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 E +DLVEI + P VCKI++ K Y K+ E ++KQK KE+K RP D D Sbjct: 66 ELEMDLVEISPNSNPPVCKIMNYGKFLYEKNKSNKEQKRKQKIINTKEIKFRPNTDTGDY 125 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEG 124 +VKL+ + FL +G KVKIS++FRGRE++H+ +G +L+ I EIS I+ P K EG Sbjct: 126 KVKLRNLTRFLENGKKVKISLRFRGREMVHKKIGINMLNRICSDLKEISSIESFPNKIEG 185 Query: 125 RQMIMILSSK 134 RQM +IL K Sbjct: 186 RQMTLILVPK 195 >gi|323704475|ref|ZP_08116053.1| translation initiation factor IF-3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535937|gb|EGB25710.1| translation initiation factor IF-3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 155 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E ++DLV+I P VCK++D K RY K E++KKQK IKE++M P I+ Sbjct: 21 KIALERHIDLVKIAPQANPPVCKLMDFGKYRYEQSKKEKESKKKQKVINIKEIRMTPAIE 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K+ FL+DG KVK++++FRGRE H +L ELL+ + E ++ P Sbjct: 81 EHDFGVKVKSAMKFLKDGDKVKVTIRFRGREASHTNLAEELLNRFAKSLEEYGNVEKAPN 140 Query: 122 FEGRQMIMILSSKCV 136 EGR ++MIL+ K V Sbjct: 141 MEGRNLMMILAPKNV 155 >gi|47094154|ref|ZP_00231874.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b H7858] gi|289435125|ref|YP_003464997.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|293596760|ref|ZP_05264091.2| translation initiation factor IF-3 [Listeria monocytogenes J2818] gi|315303674|ref|ZP_07874199.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596] gi|47017479|gb|EAL08292.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b H7858] gi|289171369|emb|CBH27911.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|293592099|gb|EFG00434.1| translation initiation factor IF-3 [Listeria monocytogenes J2818] gi|313618353|gb|EFR90389.1| translation initiation factor IF-3 [Listeria innocua FSL S4-378] gi|313623316|gb|EFR93548.1| translation initiation factor IF-3 [Listeria innocua FSL J1-023] gi|313627964|gb|EFR96572.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596] gi|313632797|gb|EFR99753.1| translation initiation factor IF-3 [Listeria seeligeri FSL N1-067] gi|313637378|gb|EFS02856.1| translation initiation factor IF-3 [Listeria seeligeri FSL S4-171] Length = 189 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 53 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 113 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 172 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLA 184 >gi|291519542|emb|CBK74763.1| bacterial translation initiation factor 3 (bIF-3) [Butyrivibrio fibrisolvens 16/4] Length = 165 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + LDLV+I P VCKI+D K RY + EA+KKQ +KE++M P ID Sbjct: 31 KLADDEGLDLVKISPKANPPVCKIVDYGKYRYEQARREKEAKKKQHVVEVKEIRMSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+ A F+ G KVK++++FRGRE+ H + +L + E +++ ++ PK Sbjct: 91 ANDMNTKVNAAKKFISKGDKVKVTLRFRGREMAHMQSSKHILDDFAEALADVAVVEKAPK 150 Query: 122 FEGRQMIMILSSK 134 EGR M ++L+ K Sbjct: 151 IEGRSMSLVLTEK 163 >gi|170760643|ref|YP_001788456.1| translation initiation factor IF-3 [Clostridium botulinum A3 str. Loch Maree] gi|169407632|gb|ACA56043.1| translation initiation factor IF-3 [Clostridium botulinum A3 str. Loch Maree] Length = 184 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 169 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPR 182 >gi|81429008|ref|YP_396008.1| translation initiation factor IF-3 [Lactobacillus sakei subsp. sakei 23K] gi|78610650|emb|CAI55701.1| Translation initiation factor IF-3 [Lactobacillus sakei subsp. sakei 23K] Length = 167 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 83/129 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A++AN+D+V + + P V +I+D K R+ +QK +ARKKQK+ +KEV++ P I+ Sbjct: 32 LAEQANMDVVLVSPNAKPPVARIMDYGKYRFELQKKQRDARKKQKTISLKEVRLSPTIEQ 91 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D KL FL G KVK S++F+GR I H+++G+ +L + + +I+++ PK Sbjct: 92 NDFNTKLNNARKFLGKGDKVKASIRFKGRAITHKEIGQRVLERLAKETEDIAKVTARPKM 151 Query: 123 EGRQMIMIL 131 +GR M ++L Sbjct: 152 DGRSMFLML 160 >gi|71892131|ref|YP_277863.1| translation initiation factor IF-3 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796237|gb|AAZ40988.1| translation initiation factor IF-3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 179 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +++ LDLVE+ + P VC+I++ K Y K+ E +KKQK +KE+K RP Sbjct: 43 LKQSEDIGLDLVEVSPNSDPPVCRIMNYGKFLYEKNKSTKEQKKKQKVIHVKEIKFRPST 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID-CE 119 D D QVKL+ + FL +G KVKI+++FRG E++H LG ++L I+ E++ ++ Sbjct: 103 DEGDYQVKLRNLIKFLNEGDKVKITLRFRGGELVHHQLGAKILYRIRHELHELTTVEFFS 162 Query: 120 PKFEGRQMIMILSSK 134 K EGRQM MIL+ K Sbjct: 163 NKIEGRQMTMILAPK 177 >gi|304317240|ref|YP_003852385.1| translation initiation factor IF-3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778742|gb|ADL69301.1| translation initiation factor IF-3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 170 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 84/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E ++DLV+I P VCK++D K RY K E++KKQK IKE++M P I+ Sbjct: 36 KIALERHIDLVKIAPQANPPVCKLMDFGKYRYEQSKKEKESKKKQKVINIKEIRMTPAIE 95 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK++++FRGRE H +L ELL+ + E ++ P Sbjct: 96 EHDFGVKVKNAIKFLKDGDKVKVTIRFRGREAAHTNLAEELLNRFAKSVEEYGNVEKAPN 155 Query: 122 FEGRQMIMILSSKCV 136 EGR ++MILS K V Sbjct: 156 MEGRNLMMILSPKNV 170 >gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 841 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 60/132 (45%), Positives = 90/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 687 LRMAGDMDVDLVEIAATASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 746 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LLS I++ ++ ++ P Sbjct: 747 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLSRIRDDLADLIVVEQFP 806 Query: 121 KFEGRQMIMILS 132 K EG+QMIM+++ Sbjct: 807 KLEGKQMIMMIA 818 >gi|257468672|ref|ZP_05632766.1| protein translation initiation factor 3 [Fusobacterium ulcerans ATCC 49185] Length = 140 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 84/134 (62%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VCKI+D K RY + A EA+K QK IKEVK+ I Sbjct: 7 LELARQEDLDLVEISPTAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQVVIKEVKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I+ FL KVK+++ GRE MH LG + L+ I E+F E++ D + Sbjct: 67 DTHDLETKMGQIEKFLSKENKVKVTLVLFGRERMHATLGIDTLNEIAEKFAEVA--DADK 124 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 125 KYNEKQKHIILTPK 138 >gi|326204765|ref|ZP_08194620.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] gi|325985136|gb|EGD45977.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] Length = 176 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A NLDLV+I ++ P VCKI+D K + K EA+K QK IKEV++ I+ Sbjct: 42 NLAITKNLDLVKIAANSEPPVCKIMDYGKFLFEQGKKEKEAKKNQKVVSIKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK+S+KFRGRE+ + G+E+L+ + E+ + +PK Sbjct: 102 EHDFDVKVKNAYKFLQDGDKVKVSIKFRGREMKYTSDGKEVLAKFAQAVNEVGVPEKQPK 161 Query: 122 FEGRQMIMILS 132 EG+ MI+IL+ Sbjct: 162 LEGKNMIVILN 172 >gi|30248960|ref|NP_841030.1| initiation factor 3 [Nitrosomonas europaea ATCC 19718] gi|30138577|emb|CAD84868.1| Initiation factor 3 [Nitrosomonas europaea ATCC 19718] Length = 164 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 78/127 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI P VC+++D K Y K +A+ +QK +KE+K RP D D + Sbjct: 14 GVDLVEIAPGAEPPVCRLMDYGKYLYQESKKKHDAKLRQKQIQVKEIKFRPNTDEGDYGI 73 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL DG KVKI+++FRGRE+ HQ+ G LL ++ + + ++ PK EGRQM Sbjct: 74 KLRNLIHFLNDGDKVKITLRFRGREMAHQEFGVRLLERVRGDLADHAVVEQFPKLEGRQM 133 Query: 128 IMILSSK 134 +M+LS K Sbjct: 134 VMVLSPK 140 >gi|226224388|ref|YP_002758495.1| translation initiation factor IF-3 [Listeria monocytogenes Clip81459] gi|225876850|emb|CAS05559.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 178 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 42 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 102 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 161 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 162 KMDGRSMFLVLAP 174 >gi|88855450|ref|ZP_01130114.1| translation initiation factor IF-3 [marine actinobacterium PHSC20C1] gi|88815357|gb|EAR25215.1| translation initiation factor IF-3 [marine actinobacterium PHSC20C1] Length = 205 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V KI+D K +Y + A EAR+ Q +T +KEV+ R I Sbjct: 39 LKLAQEADLDLVEVAPNSKPPVAKIMDYGKFKYEEAQKAKEARRNQTNTILKEVRFRLKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K +GFL G KVK + FRGRE D G LL E E I+ P Sbjct: 99 DKHDYETKRKRAEGFLAGGDKVKAMILFRGREQSRPDQGVRLLQKFAEDVSEFGSIESTP 158 Query: 121 KFEGRQMIMILSS 133 +GR M+MI+ Sbjct: 159 MIDGRNMVMIIGP 171 >gi|261368269|ref|ZP_05981152.1| translation initiation factor IF-3 [Subdoligranulum variabile DSM 15176] gi|282569784|gb|EFB75319.1| translation initiation factor IF-3 [Subdoligranulum variabile DSM 15176] Length = 146 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + +LDLV++ P VCKILD K R+ +QK EA+K QK +KE+++ I Sbjct: 10 LRMAIDKDLDLVKVAPQAKPPVCKILDYGKYRFEMQKKEKEAKKNQKVVEVKEIRLSLNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D K+ FL+ G K+K+S++FRGRE+ H LG ++ E + ID +P Sbjct: 70 DVNDFNTKVNQAAKFLQQGHKLKVSIRFRGREMAHTSLGLDVHKRFAEALAGKAVIDKQP 129 Query: 121 KFEGRQMIMILSS 133 K EGR M+M +S Sbjct: 130 KLEGRSMMMFMSP 142 >gi|224500779|ref|ZP_03669128.1| translation initiation factor IF-3 [Listeria monocytogenes Finland 1988] Length = 167 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|284802229|ref|YP_003414094.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578] gi|284995371|ref|YP_003417139.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923] gi|284057791|gb|ADB68732.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578] gi|284060838|gb|ADB71777.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923] Length = 167 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRKARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|116873222|ref|YP_850003.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217964067|ref|YP_002349745.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23] gi|224503784|ref|ZP_03672091.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-561] gi|254826389|ref|ZP_05231390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-194] gi|254829585|ref|ZP_05234272.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N3-165] gi|254832540|ref|ZP_05237195.1| translation initiation factor IF-3 [Listeria monocytogenes 10403S] gi|254854526|ref|ZP_05243874.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-503] gi|254901188|ref|ZP_05261112.1| translation initiation factor IF-3 [Listeria monocytogenes J0161] gi|254933634|ref|ZP_05266993.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262] gi|254938393|ref|ZP_05270090.1| translation initiation factor IF-3 [Listeria monocytogenes F6900] gi|254993708|ref|ZP_05275898.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-064] gi|255028319|ref|ZP_05300270.1| translation initiation factor IF-3 [Listeria monocytogenes LO28] gi|255521083|ref|ZP_05388320.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-175] gi|290893087|ref|ZP_06556076.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-071] gi|300766431|ref|ZP_07076386.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N1-017] gi|116742100|emb|CAK21224.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217333337|gb|ACK39131.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23] gi|258602002|gb|EEW15327.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N3-165] gi|258607926|gb|EEW20534.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-503] gi|258611005|gb|EEW23613.1| translation initiation factor IF-3 [Listeria monocytogenes F6900] gi|290557447|gb|EFD90972.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-071] gi|293585197|gb|EFF97229.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262] gi|293595629|gb|EFG03390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-194] gi|300512855|gb|EFK39947.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N1-017] gi|307571365|emb|CAR84544.1| translation initiation factor IF-3 [Listeria monocytogenes L99] gi|313608207|gb|EFR84232.1| translation initiation factor IF-3 [Listeria monocytogenes FSL F2-208] gi|328473852|gb|EGF44682.1| translation initiation factor IF-3 [Listeria monocytogenes 220] gi|332312225|gb|EGJ25320.1| Translation initiation factor IF-3 [Listeria monocytogenes str. Scott A] Length = 167 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|255026967|ref|ZP_05298953.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-003] Length = 167 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|310779334|ref|YP_003967667.1| bacterial translation initiation factor 3 (bIF-3) [Ilyobacter polytropus DSM 2926] gi|309748657|gb|ADO83319.1| bacterial translation initiation factor 3 (bIF-3) [Ilyobacter polytropus DSM 2926] Length = 170 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E +LDLVE+ S+ TP VCKI+D K +Y + A EA+K QK +KEVK + I Sbjct: 38 LSMAMERDLDLVEVSSNSTPPVCKIMDYGKFKYEQARKAKEAKKNQKLVVVKEVKFKARI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K I+ FL KVK+++ GRE MH DLG ++L I ERF E + D + Sbjct: 98 DKHDFETKASKIEKFLSKDNKVKVTLMLFGRERMHADLGIKILDQIAERFSETA--DVDK 155 Query: 121 KFEGRQMIMILSSK 134 K+ +Q ++L+ K Sbjct: 156 KYFDKQKHLMLTPK 169 >gi|29840528|ref|NP_829634.1| translation initiation factor IF-3 [Chlamydophila caviae GPIC] gi|33301219|sp|Q822B2|IF3_CHLCV RecName: Full=Translation initiation factor IF-3 gi|29834877|gb|AAP05512.1| translation initiation factor IF-3 [Chlamydophila caviae GPIC] Length = 186 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREADLDLVEVASNSEPPVCKIMDYGKYRYDLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D KLK F+ G KVKI+ FRGRE+ + + G ++ + + +I ++ EP Sbjct: 95 DEGDFSTKLKQARAFIEKGNKVKITCMFRGRELAYPEHGHRVVQKMSQGLEDIGFMESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVMAPGTV 170 >gi|329770371|ref|ZP_08261753.1| translation initiation factor IF-3 [Gemella sanguinis M325] gi|328836494|gb|EGF86154.1| translation initiation factor IF-3 [Gemella sanguinis M325] Length = 175 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ +LD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERLSLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKDKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPK 172 >gi|16800963|ref|NP_471231.1| translation initiation factor IF-3 [Listeria innocua Clip11262] gi|16803825|ref|NP_465310.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e] gi|46908015|ref|YP_014404.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. F2365] gi|61213118|sp|Q71YN3|IF3_LISMF RecName: Full=Translation initiation factor IF-3 gi|61226338|sp|P0A3L1|IF3_LISMO RecName: Full=Translation initiation factor IF-3 gi|61226339|sp|P0A3L2|IF3_LISIN RecName: Full=Translation initiation factor IF-3 gi|2879775|emb|CAA68920.1| translation initiation factor, IF3 [Listeria monocytogenes] gi|16411239|emb|CAC99863.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e] gi|16414398|emb|CAC97127.1| translation initiation factor IF-3 [Listeria innocua Clip11262] gi|46881285|gb|AAT04581.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. F2365] Length = 171 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 95 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 154 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 155 KMDGRSMFLVLAP 167 >gi|256825065|ref|YP_003149025.1| translation initiation factor 3 [Kytococcus sedentarius DSM 20547] gi|256688458|gb|ACV06260.1| bacterial translation initiation factor 3 (bIF-3) [Kytococcus sedentarius DSM 20547] Length = 195 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y E+RKKQ +T IKE+K+RP I Sbjct: 18 LRLAAEADLDLVEVAPMAKPPVAKLMDYGKFKYENAMKDRESRKKQVNTVIKEIKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FL G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 78 DQHDYETKKGHVERFLAAGDKVKVTIMFRGREQSKPELGFRLLQRLAEDVTELGVVESKP 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+ S Sbjct: 138 KQDGRNMTMVFGS 150 >gi|254785571|ref|YP_003073000.1| translation initiation factor IF-3 [Teredinibacter turnerae T7901] gi|237687414|gb|ACR14678.1| translation initiation factor IF-3 [Teredinibacter turnerae T7901] Length = 143 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ A+LDLVEI S P VCKI+D K + I+K A+KKQK +KE+K RP Sbjct: 7 LEAAQAASLDLVEIASEAEPIVCKIMDYGKHLFEIKKQKAAAKKKQKQQQVKEMKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D +VKL+ + F+ G K K+S+++RGRE+ HQ+LG E++ I+ EI+ ++ P Sbjct: 67 EEGDYKVKLRNLQRFIEHGDKAKVSLRYRGREMAHQELGMEMMKRIEVDLDEIASVEQYP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+IM+L+ K Sbjct: 127 KMEGRQLIMVLAPK 140 >gi|50121349|ref|YP_050516.1| translation initiation factor IF-3 [Pectobacterium atrosepticum SCRI1043] gi|261821452|ref|YP_003259558.1| translation initiation factor IF-3 [Pectobacterium wasabiae WPP163] gi|61213102|sp|Q6D4G9|IF3_ERWCT RecName: Full=Translation initiation factor IF-3 gi|49611875|emb|CAG75324.1| translation initiation factor IF-3 [Pectobacterium atrosepticum SCRI1043] gi|261605465|gb|ACX87951.1| translation initiation factor IF-3 [Pectobacterium wasabiae WPP163] Length = 180 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|253688276|ref|YP_003017466.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259491511|sp|C6DFY7|IF3_PECCP RecName: Full=Translation initiation factor IF-3 gi|251754854|gb|ACT12930.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 180 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|134282396|ref|ZP_01769101.1| translation initiation factor IF-3 [Burkholderia pseudomallei 305] gi|226199659|ref|ZP_03795212.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pakistan 9] gi|254297838|ref|ZP_04965291.1| translation initiation factor IF-3 [Burkholderia pseudomallei 406e] gi|134246434|gb|EBA46523.1| translation initiation factor IF-3 [Burkholderia pseudomallei 305] gi|157807599|gb|EDO84769.1| translation initiation factor IF-3 [Burkholderia pseudomallei 406e] gi|225928245|gb|EEH24279.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pakistan 9] Length = 126 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 77/123 (62%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI P VC+++D K +Y K EA+ KQK +KEVK RP D D VKL+ Sbjct: 1 MEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+L Sbjct: 61 LVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVL 120 Query: 132 SSK 134 S K Sbjct: 121 SPK 123 >gi|56413680|ref|YP_150755.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|81677884|sp|Q5PH88|IF3_SALPA RecName: Full=Translation initiation factor IF-3 gi|56127937|gb|AAV77443.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 180 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKTEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|227833184|ref|YP_002834891.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] gi|262184170|ref|ZP_06043591.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] gi|227454200|gb|ACP32953.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] Length = 148 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|307611590|emb|CBX01272.1| translation initiation factor IF-3 [Legionella pneumophila 130b] Length = 126 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 80/123 (65%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLLMVL 120 Query: 132 SSK 134 S K Sbjct: 121 SPK 123 >gi|187776941|ref|ZP_02993414.1| hypothetical protein CLOSPO_00485 [Clostridium sporogenes ATCC 15579] gi|187775600|gb|EDU39402.1| hypothetical protein CLOSPO_00485 [Clostridium sporogenes ATCC 15579] Length = 164 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+ ++ PK Sbjct: 90 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELGVMEKAPK 149 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPR 162 >gi|331090829|ref|ZP_08339675.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399688|gb|EGG79350.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 2_1_46FAA] Length = 164 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLV+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEADLDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKTVDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + E +++ ++ +P Sbjct: 90 ESNDLNTKVNNAKKFIEKGNKVKVTLRFRGREMAHVQTSKHILDDFAEMLKDVASVEKQP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|295693379|ref|YP_003601989.1| translation initiation factor if-3 [Lactobacillus crispatus ST1] gi|295031485|emb|CBL50964.1| Translation initiation factor IF-3 [Lactobacillus crispatus ST1] Length = 149 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 85/133 (63%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K +KE+++ P I Sbjct: 7 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKIVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIANVISK 126 Query: 120 PKFEGRQMIMILS 132 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLA 139 >gi|115379014|ref|ZP_01466144.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|115363988|gb|EAU63093.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 185 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI +P VCK++D K +Y +K A E+++ Q +KEVK+RP Sbjct: 7 LERARTEGLDLVEISPMASPPVCKLMDYGKFKYEEKKKAAESKRAQVVIQLKEVKLRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+ ++FRGREI H++ G +L+++ + ++ ++ P Sbjct: 67 EEHDYEFKVRNMRRFLEEGNKAKVVIQFRGREITHREQGTVILNDVAQDLKDVGVVEQPP 126 Query: 121 KFEGRQMIMILSSKC 135 + EGR M MIL+ Sbjct: 127 RMEGRLMFMILAPTA 141 >gi|172037491|ref|YP_001803992.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] gi|171698945|gb|ACB51926.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] Length = 179 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE +LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LNVAQERDLDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L +ELLS + E++ I P Sbjct: 102 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQELLSRMAADLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPK 175 >gi|253582912|ref|ZP_04860130.1| initiation factor IF3 [Fusobacterium varium ATCC 27725] gi|317062927|ref|ZP_07927412.1| translation initiation factor IF-3 [Fusobacterium ulcerans ATCC 49185] gi|251835118|gb|EES63661.1| initiation factor IF3 [Fusobacterium varium ATCC 27725] gi|313688603|gb|EFS25438.1| translation initiation factor IF-3 [Fusobacterium ulcerans ATCC 49185] Length = 169 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 84/134 (62%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VCKI+D K RY + A EA+K QK IKEVK+ I Sbjct: 36 LELARQEDLDLVEISPTAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQVVIKEVKVTARI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I+ FL KVK+++ GRE MH LG + L+ I E+F E++ D + Sbjct: 96 DTHDLETKMGQIEKFLSKENKVKVTLVLFGRERMHATLGIDTLNEIAEKFAEVA--DADK 153 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 154 KYNEKQKHIILTPK 167 >gi|114776995|ref|ZP_01452015.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1] gi|114552516|gb|EAU54976.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1] Length = 178 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 77/129 (59%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLV + + P VC+I+D K +Y K A A+K+Q IKEVK+R D H Sbjct: 46 AEAKGLDLVLMAAKSNPPVCRIMDYGKYKYEQSKKANAAKKRQHVMQIKEVKVRASTDQH 105 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL VK++ FL +G KVK+S++FRGRE+ H G + ++ E E + + P E Sbjct: 106 DLDVKMRHAKQFLSEGNKVKVSLRFRGREMAHTGQGLAQMKHVAELVAEFGKPEKMPNME 165 Query: 124 GRQMIMILS 132 GRQMIMIL+ Sbjct: 166 GRQMIMILA 174 >gi|197362603|ref|YP_002142240.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197094080|emb|CAR59580.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 144 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKTEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPK 141 >gi|218438894|ref|YP_002377223.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424] gi|218171622|gb|ACK70355.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424] Length = 177 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + TP VC+++D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 43 LKIAEEKELDLVLVSETATPPVCRVMDYGKFKFEQEKKAREAKKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL + EI+ + P Sbjct: 103 DDHDYHVRVNQAQRFLKSGDKVKATITFRGREIQHANLAEELLQRMATDLQEIAEVQQAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 163 KKEGRNMMMLLSPK 176 >gi|227501816|ref|ZP_03931865.1| translation initiation factor IF-3 [Corynebacterium accolens ATCC 49725] gi|306835994|ref|ZP_07468986.1| translation initiation factor IF3 [Corynebacterium accolens ATCC 49726] gi|227077841|gb|EEI15804.1| translation initiation factor IF-3 [Corynebacterium accolens ATCC 49725] gi|304568160|gb|EFM43733.1| translation initiation factor IF3 [Corynebacterium accolens ATCC 49726] Length = 148 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKSNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|238898886|ref|YP_002924568.1| protein chain initiation factor IF-3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259491506|sp|C4K777|IF3_HAMD5 RecName: Full=Translation initiation factor IF-3 gi|229466646|gb|ACQ68420.1| protein chain initiation factor IF-3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 184 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 87/139 (62%), Gaps = 5/139 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+EA +DLVEI + P VC+++D K Y K+ + +KKQ+ +KEVK RP Sbjct: 43 LQKAEEAGVDLVEISPNADPPVCRVMDYGKFLYEKSKSIKDQKKKQRVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK----ERFGEISRI 116 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G +L I+ E I+ + Sbjct: 103 DEGDYQVKLRSLTRFLEEGDKAKITLRFRGREMAHQQIGMAMLERIRRDLCESENSIALV 162 Query: 117 DCEP-KFEGRQMIMILSSK 134 + P + EGRQ+ M+L+ K Sbjct: 163 ESFPARIEGRQISMVLAPK 181 >gi|14194830|sp|Q9CN42|IF3_PASMU RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 44 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+V+FRGRE+ HQD+G E+L +K EIS ++ P Sbjct: 104 DEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIGLEVLERVKNDLAEISVVESAP 163 Query: 121 -KFEGRQMIMILSSK 134 + EGRQ +M+L+ K Sbjct: 164 GRLEGRQAVMVLAPK 178 >gi|146311381|ref|YP_001176455.1| translation initiation factor IF-3 [Enterobacter sp. 638] gi|145318257|gb|ABP60404.1| bacterial translation initiation factor 3 (bIF-3) [Enterobacter sp. 638] Length = 144 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEESGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 67 DDGDYQVKLRSLVRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRDDLSELAVVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 SKIEGRQMIMVLAPK 141 >gi|196233282|ref|ZP_03132127.1| translation initiation factor IF-3 [Chthoniobacter flavus Ellin428] gi|196222587|gb|EDY17112.1| translation initiation factor IF-3 [Chthoniobacter flavus Ellin428] Length = 185 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 2/129 (1%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE LDLVE+ +S P VC+I+D K +Y K+ E K+ S+ +KE+K R ID H Sbjct: 24 AQEMGLDLVEVAASANPPVCRIVDFGKFKYEAAKH--EKEKRNVSSKLKEIKFRVNIDEH 81 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D + K++ + FL G KV++ ++FRGRE+ HQ+LG +L++ +K ++ ++ EPK Sbjct: 82 DYETKMRHAEEFLDKGNKVRVQLQFRGREMAHQELGMQLMARVKTDLVTMAHVEMEPKLL 141 Query: 124 GRQMIMILS 132 G+ + M L+ Sbjct: 142 GKSVTMTLA 150 >gi|289525879|emb|CBJ15361.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis Sweden2] Length = 175 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 155 KLNGRSLICVIA 166 >gi|319426374|gb|ADV54448.1| translation initiation factor IF-3 [Shewanella putrefaciens 200] Length = 180 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 46 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 106 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 165 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 166 MEGRQAIMVLAPK 178 >gi|153000742|ref|YP_001366423.1| translation initiation factor IF-3 [Shewanella baltica OS185] gi|217973357|ref|YP_002358108.1| translation initiation factor IF-3 [Shewanella baltica OS223] gi|226707359|sp|A6WNH1|IF3_SHEB8 RecName: Full=Translation initiation factor IF-3 gi|254803491|sp|B8EES7|IF3_SHEB2 RecName: Full=Translation initiation factor IF-3 gi|151365360|gb|ABS08360.1| translation initiation factor IF-3 [Shewanella baltica OS185] gi|217498492|gb|ACK46685.1| translation initiation factor IF-3 [Shewanella baltica OS223] gi|315267631|gb|ADT94484.1| translation initiation factor IF-3 [Shewanella baltica OS678] Length = 180 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 46 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 106 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 165 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 166 MEGRQAIMVLAPK 178 >gi|15618898|ref|NP_225184.1| translation initiation factor IF-3 [Chlamydophila pneumoniae CWL029] gi|15836521|ref|NP_301045.1| translation initiation factor IF-3 [Chlamydophila pneumoniae J138] gi|16752037|ref|NP_445403.1| translation initiation factor IF-3 [Chlamydophila pneumoniae AR39] gi|7387796|sp|Q9Z6R9|IF3_CHLPN RecName: Full=Translation initiation factor IF-3 gi|4377318|gb|AAD19127.1| Initiation Factor 3 [Chlamydophila pneumoniae CWL029] gi|7189777|gb|AAF38654.1| translation initiation factor 3 [Chlamydophila pneumoniae AR39] gi|8979363|dbj|BAA99197.1| initiation factor 3 [Chlamydophila pneumoniae J138] Length = 186 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYGLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLAGRSLICVVAPGTV 170 >gi|95930295|ref|ZP_01313033.1| translation initiation factor IF-3 [Desulfuromonas acetoxidans DSM 684] gi|95133758|gb|EAT15419.1| translation initiation factor IF-3 [Desulfuromonas acetoxidans DSM 684] Length = 152 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDLVE+ + P VC+I+D K +Y +QK A EA+KK +KEVK+RP Sbjct: 17 LEAAADRGLDLVEVSPNAKPPVCRIMDYGKYKYQLQKRAAEAKKKAARVEVKEVKLRPKT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++HD VK+K + FL G KVK+++ FRGRE+ H + GRELL + + +I I+ P Sbjct: 77 EIHDFNVKVKNVRRFLDAGNKVKVTIMFRGREVTHPEFGRELLQRVADEVADIGVIEFFP 136 Query: 121 KFEGRQMIMILSS 133 +GR M M+++ Sbjct: 137 SMQGRFMHMVMAP 149 >gi|255349238|ref|ZP_05381245.1| translation initiation factor IF-3 [Chlamydia trachomatis 70] gi|255503775|ref|ZP_05382165.1| translation initiation factor IF-3 [Chlamydia trachomatis 70s] gi|255507456|ref|ZP_05383095.1| translation initiation factor IF-3 [Chlamydia trachomatis D(s)2923] gi|296435465|gb|ADH17643.1| translation initiation factor IF-3 [Chlamydia trachomatis E/150] gi|296439182|gb|ADH21335.1| translation initiation factor IF-3 [Chlamydia trachomatis E/11023] Length = 198 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 58 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 118 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 177 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 178 KLNGRSLICVIA 189 >gi|29427470|sp|Q8EER8|IF3_SHEON RecName: Full=Translation initiation factor IF-3 Length = 178 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 44 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 104 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAVVESFPK 163 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 164 MEGRQAIMVLAPK 176 >gi|269139161|ref|YP_003295862.1| translation initiation factor IF-3 [Edwardsiella tarda EIB202] gi|267984822|gb|ACY84651.1| translation initiation factor IF-3 [Edwardsiella tarda EIB202] gi|304559085|gb|ADM41749.1| Translation initiation factor 3 [Edwardsiella tarda FL6-60] Length = 152 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK IKE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQIKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 135 SKIEGRQMIMVLAPK 149 >gi|310825024|ref|YP_003957382.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|309398096|gb|ADO75555.1| Translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 196 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI +P VCK++D K +Y +K A E+++ Q +KEVK+RP Sbjct: 18 LERARTEGLDLVEISPMASPPVCKLMDYGKFKYEEKKKAAESKRAQVVIQLKEVKLRPKT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+ ++FRGREI H++ G +L+++ + ++ ++ P Sbjct: 78 EEHDYEFKVRNMRRFLEEGNKAKVVIQFRGREITHREQGTVILNDVAQDLKDVGVVEQPP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGR M MIL+ Sbjct: 138 RMEGRLMFMILAPTA 152 >gi|328953979|ref|YP_004371313.1| Translation initiation factor IF-3 [Desulfobacca acetoxidans DSM 11109] gi|328454303|gb|AEB10132.1| Translation initiation factor IF-3 [Desulfobacca acetoxidans DSM 11109] Length = 159 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 74/125 (59%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVE+ P VC+I+D K +Y K EARKKQ +KEVK RP I+ HD+ K+ Sbjct: 35 DLVEVAPQANPPVCRIMDYGKFKYLQSKKVQEARKKQTIIQVKEVKFRPKIEEHDVAFKI 94 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 K I FL K KIS+ FRGREI H +G +LL+ + +I ++ PK EGR + M Sbjct: 95 KNIRRFLAQKDKTKISLIFRGREIAHPQIGIDLLNRVATELEDIGTVEQPPKIEGRNLTM 154 Query: 130 ILSSK 134 I++ K Sbjct: 155 IIAPK 159 >gi|126659540|ref|ZP_01730672.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110] gi|126619179|gb|EAZ89916.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110] Length = 195 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE +LDLV + S P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 58 LNVAQERDLDLVLVSESAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L ++LLS + E++ I P Sbjct: 118 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQDLLSRMATDLQELAEIQQAP 177 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 178 KREGRNMMMLMSPK 191 >gi|237796593|ref|YP_002864145.1| translation initiation factor IF-3 [Clostridium botulinum Ba4 str. 657] gi|229260890|gb|ACQ51923.1| translation initiation factor IF-3 [Clostridium botulinum Ba4 str. 657] Length = 184 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGVMEKAPK 169 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPR 182 >gi|222151592|ref|YP_002560748.1| translation initiation factor IF-3 [Macrococcus caseolyticus JCSC5402] gi|254803489|sp|B9E784|IF3_MACCJ RecName: Full=Translation initiation factor IF-3 gi|222120717|dbj|BAH18052.1| translation initiation factor IF-3 [Macrococcus caseolyticus JCSC5402] Length = 178 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ NLD+V + + P V KI+D K ++ QK EARKKQK +KE+++ P I Sbjct: 39 IEIAERVNLDVVLVAPNAKPPVAKIMDYGKFKFEQQKKEKEARKKQKVVTVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL KVK+S++FRGR I H++ G+ +L E +++ ++ +P Sbjct: 99 EDHDFNTKLKNARKFLEKEDKVKVSIRFRGRAITHKEFGQRVLEKFAEECKDLATVEQKP 158 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 159 KMDGRSMFLMLA 170 >gi|126174366|ref|YP_001050515.1| translation initiation factor IF-3 [Shewanella baltica OS155] gi|160875441|ref|YP_001554757.1| translation initiation factor IF-3 [Shewanella baltica OS195] gi|125997571|gb|ABN61646.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella baltica OS155] gi|160860963|gb|ABX49497.1| translation initiation factor IF-3 [Shewanella baltica OS195] Length = 143 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPK 141 >gi|120598809|ref|YP_963383.1| translation initiation factor IF-3 [Shewanella sp. W3-18-1] gi|146293113|ref|YP_001183537.1| translation initiation factor IF-3 [Shewanella putrefaciens CN-32] gi|120558902|gb|ABM24829.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. W3-18-1] gi|145564803|gb|ABP75738.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella putrefaciens CN-32] Length = 143 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPK 141 >gi|311113266|ref|YP_003984488.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931] gi|310944760|gb|ADP41054.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931] Length = 233 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 52 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAVKARESRKKQVNAVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E E+S I+ P Sbjct: 112 DTHDYETKVGHARRFLTGGDKVKAMIQFRGREQQRPEMGVRLLERLAEELAEVSTIESRP 171 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 172 RQDGRNMVMVLAP 184 >gi|15602467|ref|NP_245539.1| translation initiation factor IF-3 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720873|gb|AAK02686.1| InfC [Pasteurella multocida subsp. multocida str. Pm70] Length = 154 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 18 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+V+FRGRE+ HQD+G E+L +K EIS ++ P Sbjct: 78 DEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIGLEVLERVKNDLAEISVVESAP 137 Query: 121 -KFEGRQMIMILSSK 134 + EGRQ +M+L+ K Sbjct: 138 GRLEGRQAVMVLAPK 152 >gi|297571534|ref|YP_003697308.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum DSM 20595] gi|296931881|gb|ADH92689.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum DSM 20595] Length = 202 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEANLDLVE+ + P V K++D K +Y + A E+R+ Q +T +KE+++ I Sbjct: 23 LRLAQEANLDLVEVAPNANPPVAKLMDYGKFKYEAAQKARESRRNQANTQLKEMRLGLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK I FL G KVK+ ++FRGRE ++G L+ + E + ++ P Sbjct: 83 DQHDYETKLKRIIKFLNGGDKVKVQLRFRGREQSRPEVGVRLMERLAADTAEDAVVESAP 142 Query: 121 KFEGRQMIMILS 132 + +GR M+M+L+ Sbjct: 143 RVDGRSMVMVLA 154 >gi|303232505|ref|ZP_07319192.1| translation initiation factor IF-3 [Atopobium vaginae PB189-T1-4] gi|302481389|gb|EFL44462.1| translation initiation factor IF-3 [Atopobium vaginae PB189-T1-4] Length = 165 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKVEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VK+++ FRGRE+ H + G +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKRGARVKVTIMFRGREMAHPEQGLNVLERLAADLKPYATVEQQPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|290890821|ref|ZP_06553888.1| hypothetical protein AWRIB429_1278 [Oenococcus oeni AWRIB429] gi|290479593|gb|EFD88250.1| hypothetical protein AWRIB429_1278 [Oenococcus oeni AWRIB429] Length = 175 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 84/132 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A + NLDLV + + P V +I+D K+R+ QK E +KKQ KEV++ PVI Sbjct: 19 IADQRNLDLVIVQAKAQPPVARIMDWGKVRFEQQKKIRENKKKQVIVQTKEVRLSPVIGE 78 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 79 GDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQL 138 Query: 123 EGRQMIMILSSK 134 GRQM ++LS K Sbjct: 139 LGRQMSLLLSPK 150 >gi|30410815|ref|NP_848539.1| translation initiation factor IF-3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654241|sp|P46243|IF3_BUCAP RecName: Full=Translation initiation factor IF-3 Length = 179 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVKI+++FRGRE+ HQ +G ++L+ +K E++ I+ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPK 177 >gi|269302791|gb|ACZ32891.1| translation initiation factor IF-3 [Chlamydophila pneumoniae LPCoLN] Length = 186 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYDLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLAGRSLICVVAPGTV 170 >gi|213966331|ref|ZP_03394513.1| translation initiation factor IF-3 [Corynebacterium amycolatum SK46] gi|213951037|gb|EEB62437.1| translation initiation factor IF-3 [Corynebacterium amycolatum SK46] Length = 183 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP I Sbjct: 44 LKLAYEADLDLVEVAPRAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 104 DDHDYETKKNNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAADVEEYGTVESRP 163 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L Sbjct: 164 KQDGRNMTMVLGP 176 >gi|24373853|ref|NP_717896.1| translation initiation factor IF-3 [Shewanella oneidensis MR-1] gi|24348260|gb|AAN55340.1|AE015671_7 translation initiation factor IF-3 [Shewanella oneidensis MR-1] Length = 143 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPK 141 >gi|312139882|ref|YP_004007218.1| translation initiation factor 3 infc [Rhodococcus equi 103S] gi|325674240|ref|ZP_08153929.1| translation initiation factor IF3 [Rhodococcus equi ATCC 33707] gi|311889221|emb|CBH48535.1| translation initiation factor 3 InfC [Rhodococcus equi 103S] gi|325554920|gb|EGD24593.1| translation initiation factor IF3 [Rhodococcus equi ATCC 33707] Length = 173 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRVALEADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKRNVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|295320404|gb|ADG00782.1| translation initiation factor IF-3 [Clostridium botulinum F str. 230613] Length = 164 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 90 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 149 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPR 162 >gi|153941432|ref|YP_001392414.1| translation initiation factor IF-3 [Clostridium botulinum F str. Langeland] gi|152937328|gb|ABS42826.1| translation initiation factor IF-3 [Clostridium botulinum F str. Langeland] Length = 184 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 169 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPR 182 >gi|296437320|gb|ADH19490.1| translation initiation factor IF-3 [Chlamydia trachomatis G/11222] gi|297748962|gb|ADI51508.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Chlamydia trachomatis D-EC] gi|297749842|gb|ADI52520.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Chlamydia trachomatis D-LC] Length = 198 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 58 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 118 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 177 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 178 KLNGRSLICVIA 189 >gi|54023882|ref|YP_118124.1| putative translation initiation factor IF-3 [Nocardia farcinica IFM 10152] gi|54015390|dbj|BAD56760.1| putative translation initiation factor IF-3 [Nocardia farcinica IFM 10152] Length = 178 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRVAMEADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKGHVMRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLAGDVADLGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|260914006|ref|ZP_05920480.1| initiation factor IF3 [Pasteurella dagmatis ATCC 43325] gi|260632093|gb|EEX50270.1| initiation factor IF3 [Pasteurella dagmatis ATCC 43325] Length = 159 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLADISVVESAP 142 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 143 GKLEGRQAVMVLAPK 157 >gi|170717592|ref|YP_001784676.1| translation initiation factor IF-3 [Haemophilus somnus 2336] gi|168825721|gb|ACA31092.1| translation initiation factor IF-3 [Haemophilus somnus 2336] Length = 159 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A+LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LNMAEQADLDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +I+ ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDMLERVKNDLADIAVVESAP 142 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPK 157 >gi|332670156|ref|YP_004453164.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484] gi|332339194|gb|AEE45777.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484] Length = 309 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P VCKI+D K +Y A EAR+ Q +T +KE++ R I Sbjct: 5 LRLAQDADLDLVEVAPDARPPVCKIMDYGKFKYEADMKAREARRNQTNTVLKEIRFRLKI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 65 DPHDYGTKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGIRLLQRLADDVAELGFVESSP 124 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 125 KQDGRNMIMVLGP 137 >gi|255311674|ref|ZP_05354244.1| translation initiation factor IF-3 [Chlamydia trachomatis 6276] gi|255317975|ref|ZP_05359221.1| translation initiation factor IF-3 [Chlamydia trachomatis 6276s] gi|296436389|gb|ADH18563.1| translation initiation factor IF-3 [Chlamydia trachomatis G/9768] gi|296438248|gb|ADH20409.1| translation initiation factor IF-3 [Chlamydia trachomatis G/11074] gi|297140749|gb|ADH97507.1| translation initiation factor IF-3 [Chlamydia trachomatis G/9301] Length = 258 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 118 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 177 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 178 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 237 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 238 KLNGRSLICVIA 249 >gi|300744014|ref|ZP_07073034.1| translation initiation factor IF-3 [Rothia dentocariosa M567] gi|300380375|gb|EFJ76938.1| translation initiation factor IF-3 [Rothia dentocariosa M567] Length = 246 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 65 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAVKARESRKKQVNAVLKEIRFRLKI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E E+S I+ P Sbjct: 125 DTHDYETKVGHARRFLTGGDKVKAMIQFRGREQQRPEMGVRLLERLAEELAEVSTIESRP 184 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 185 RQDGRNMVMVLAP 197 >gi|262374877|ref|ZP_06068111.1| translation initiation factor IF-3 [Acinetobacter lwoffii SH145] gi|262309890|gb|EEY91019.1| translation initiation factor IF-3 [Acinetobacter lwoffii SH145] Length = 165 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI ++ P VCKI+D K + +++ EA+KKQ +KE+K+RP Sbjct: 29 LRAAESVELDLVEIVANAEPPVCKIMDFNKHLFDLKQKQKEAKKKQHQVQVKEIKLRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E ++ P Sbjct: 89 DVGDYNVKLRAIIKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAEFGTVEQMP 148 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+L K Sbjct: 149 KMEGRQMGMLLGPK 162 >gi|15605568|ref|NP_220354.1| translation initiation factor IF-3 [Chlamydia trachomatis D/UW-3/CX] gi|7387790|sp|O84840|IF3_CHLTR RecName: Full=Translation initiation factor IF-3 gi|6578116|gb|AAC68430.2| Initiation Factor 3 [Chlamydia trachomatis D/UW-3/CX] Length = 175 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 155 KLNGRSLICVIA 166 >gi|289208098|ref|YP_003460164.1| translation initiation factor IF-3 [Thioalkalivibrio sp. K90mix] gi|288943729|gb|ADC71428.1| translation initiation factor IF-3 [Thioalkalivibrio sp. K90mix] Length = 172 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE+ LDLVEI + P V +I+D K ++ K A EA+KKQK IKEVK RP Sbjct: 37 LEMAQESGLDLVEISPNAEPPVARIMDYGKFKFEQAKKAQEAKKKQKQIQIKEVKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + F+ G K K++++FRGRE+ HQ+LG ELL I++ +I+ ++ P Sbjct: 97 DEGDYKVKLRNLRRFIEAGDKGKVTIRFRGREMRHQELGGELLDKIEQDMSDIAVVEQRP 156 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 157 KMEGRQMIMVLTGK 170 >gi|229492674|ref|ZP_04386475.1| translation initiation factor IF-3 [Rhodococcus erythropolis SK121] gi|229320333|gb|EEN86153.1| translation initiation factor IF-3 [Rhodococcus erythropolis SK121] Length = 230 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 46 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 106 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADLGFVETSA 165 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 166 KQDGRNMTMVLAP 178 >gi|113970293|ref|YP_734086.1| translation initiation factor IF-3 [Shewanella sp. MR-4] gi|114047516|ref|YP_738066.1| translation initiation factor IF-3 [Shewanella sp. MR-7] gi|117920488|ref|YP_869680.1| translation initiation factor IF-3 [Shewanella sp. ANA-3] gi|113884977|gb|ABI39029.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. MR-4] gi|113888958|gb|ABI43009.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. MR-7] gi|117612820|gb|ABK48274.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. ANA-3] Length = 143 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAIVESFPK 128 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPK 141 >gi|307545105|ref|YP_003897584.1| translation initiation factor IF-3 [Halomonas elongata DSM 2581] gi|307217129|emb|CBV42399.1| translation initiation factor IF-3 [Halomonas elongata DSM 2581] Length = 163 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A +DLV+I S+ P VCKI+D K + +K +KKQK +KEVK RP Sbjct: 29 LERAEAAGMDLVQI-SNADPIVCKIMDYGKFVFEQKKQKAAQKKKQKQIQVKEVKFRPGT 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVK+K + FL G K K++++FRGRE+ HQD+GR+L+ I EI ++ P Sbjct: 88 DEGDYQVKMKNLTRFLESGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEEIGTVESFP 147 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIMI++ K Sbjct: 148 KMEGRQMIMIIAPK 161 >gi|226306782|ref|YP_002766742.1| translation initiation factor IF-3 [Rhodococcus erythropolis PR4] gi|226185899|dbj|BAH34003.1| translation initiation factor IF-3 [Rhodococcus erythropolis PR4] Length = 219 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 35 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 95 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADLGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|262369845|ref|ZP_06063172.1| chain initiation factor IF-3 [Acinetobacter johnsonii SH046] gi|262314884|gb|EEY95924.1| chain initiation factor IF-3 [Acinetobacter johnsonii SH046] Length = 165 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI ++ P VCKI+D K + +++ EA+KKQ +KE+K+RP Sbjct: 29 LRAAESVELDLVEIVANAEPPVCKIMDFNKHLFDLKQKQKEAKKKQHQVQVKEIKLRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+AI FL +G KVKI+++FRGRE+ HQ LG L ++ ++ ++ P Sbjct: 89 DVGDYNVKLRAITKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKVEADVADLGVVEQAP 148 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+L K Sbjct: 149 KMEGRQMGMLLGPK 162 >gi|167623947|ref|YP_001674241.1| translation initiation factor IF-3 [Shewanella halifaxensis HAW-EB4] gi|167353969|gb|ABZ76582.1| translation initiation factor IF-3 [Shewanella halifaxensis HAW-EB4] Length = 142 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+++D K + K E +KKQK +KE+K RP D Sbjct: 8 EVADEAGVDLVEISPNAEPPVCRVMDYGKFLFDKAKAQKEQKKKQKIVQVKEIKFRPGTD 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG +LL+ IK I+ ++ PK Sbjct: 68 ENDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQSLGMDLLNRIKADLEVIAVVESFPK 127 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 128 MEGRQAVMVLAPK 140 >gi|89094704|ref|ZP_01167640.1| translation initiation factor IF-3 [Oceanospirillum sp. MED92] gi|89081050|gb|EAR60286.1| translation initiation factor IF-3 [Oceanospirillum sp. MED92] Length = 167 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLV+I S P VCK++D K Y ++K EA+KKQ IKEVK RP Sbjct: 32 LEAAQEAGLDLVKI-SEADPIVCKVMDYGKHLYELKKQKNEAKKKQHQVQIKEVKFRPNT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K KI++++RGRE+ HQ+LG +LL I++ E+ ++ P Sbjct: 91 EEGDYQVKLRNLIRFLEAGDKAKITLRYRGREMAHQELGMQLLQRIEKELEEMITVEQRP 150 Query: 121 KFEGRQMIMILSSK 134 K EGRQ++M+++ K Sbjct: 151 KMEGRQLVMVIAPK 164 >gi|332529094|ref|ZP_08405058.1| translation initiation factor 3 [Hylemonella gracilis ATCC 19624] gi|332041317|gb|EGI77679.1| translation initiation factor 3 [Hylemonella gracilis ATCC 19624] Length = 180 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E ++DLVEI + P VC+++D K +Y QK A EA+ KQ +KEVK RP Sbjct: 24 LRLAGEMDVDLVEIVPTAVPPVCRLVDYGKFKYQEQKKAAEAKAKQTVIEVKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G KVKI+++FRGREI HQ+LG +L ++ G++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLEEGDKVKITLRFRGREITHQELGMAMLDRMRADLGDLIVVEQMP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|323356733|ref|YP_004223129.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum StLB037] gi|323273104|dbj|BAJ73249.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum StLB037] Length = 236 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ S P V KI+D K +Y + A E R+ Q +T +KEV+ R I Sbjct: 62 LRLAQEADLDLVEVAPSSKPPVVKIMDYGKFKYEAAQKAKETRRNQANTVLKEVRFRLKI 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK +GFL+ G KVK + FRGRE + G LL E E ++ P Sbjct: 122 EAHDYITKLKRAEGFLQAGDKVKAMILFRGREQSRPEQGVRLLRKFAEDVAEFGTVESNP 181 Query: 121 KFEGRQMIMILS 132 +GR M+M+++ Sbjct: 182 TIDGRNMVMVVA 193 >gi|220930059|ref|YP_002506968.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|220000387|gb|ACL76988.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 176 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 81/131 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA NLDLV+I + P VCKI+D K + K EA+K QK +KEV++ I+ Sbjct: 42 QMAITKNLDLVKIVPNGAPPVCKIMDYSKYVFEQGKKEKEAKKNQKVVSLKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K+ FL+DG KVK+S+KFRGRE+ + G+++L E+ + +PK Sbjct: 102 EHDFDVKVKSAYKFLKDGDKVKVSIKFRGREMKYTSDGKDVLEKFTSVVSEVGVAERQPK 161 Query: 122 FEGRQMIMILS 132 EG+ MI+IL+ Sbjct: 162 LEGKSMIIILN 172 >gi|160940543|ref|ZP_02087887.1| hypothetical protein CLOBOL_05438 [Clostridium bolteae ATCC BAA-613] gi|158436503|gb|EDP14270.1| hypothetical protein CLOBOL_05438 [Clostridium bolteae ATCC BAA-613] Length = 164 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA LDLV+I + P VCKI+D K RY + + EA+KKQK IKEV++ P I Sbjct: 30 LRMAQEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ ID Sbjct: 90 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMFKSKYILDDFAESLKDIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|295109210|emb|CBL23163.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus obeum A2-162] Length = 164 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELSRKEKEAKKKQKTIDIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ A FL G +VK++++FRGRE+ H + +L + E +I+ ++ PK E Sbjct: 93 DLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMSSSKHVLDDFAELLTDIAVVEKAPKIE 152 Query: 124 GRQMIMILSSK 134 GR M M LS K Sbjct: 153 GRSMTMFLSEK 163 >gi|149919497|ref|ZP_01907977.1| translation initiation factor IF-3 [Plesiocystis pacifica SIR-1] gi|149819622|gb|EDM79049.1| translation initiation factor IF-3 [Plesiocystis pacifica SIR-1] Length = 217 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E +L+LVE++ +P VCKI+D K +Y K +A+K +KS +KEVK RP Sbjct: 18 MRRADEQSLELVEVNPKASPPVCKIMDYGKFKYENAKRERDAKKNKKSQELKEVKFRPKT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD K+K FL D KV++ V+FRGRE++H + GR++L+ + + +++ + P Sbjct: 78 HDHDFTFKVKHARRFLEDNNKVRLLVQFRGREVVHPETGRDVLNRVIKEVMDLATVIQVP 137 Query: 121 KFEGRQMIMILSSKC 135 EG +M MIL+ K Sbjct: 138 SMEGNRMSMILAPKA 152 >gi|325971718|ref|YP_004247909.1| translation initiation factor IF-3 [Spirochaeta sp. Buddy] gi|324026956|gb|ADY13715.1| Translation initiation factor IF-3 [Spirochaeta sp. Buddy] Length = 184 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 3/137 (2%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+ LDLVE+ + P VCK+LD K RY +K +A+K Q +KE++M+P I+ Sbjct: 38 LAESVGLDLVEVSPNANPPVCKVLDFGKYRYEQEKRLRDAKKNQSVVKMKEIRMQPKIER 97 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS---RIDCE 119 HDL+ K K I FL +G KVK+S++FRGRE+ H +LG+ +L I + E +D + Sbjct: 98 HDLETKSKFIGEFLAEGNKVKVSIRFRGRELAHTELGKVVLDKILAQLTENGVGFNLDRD 157 Query: 120 PKFEGRQMIMILSSKCV 136 EG+ M MI+S V Sbjct: 158 ALMEGKMMSMIVSPAKV 174 >gi|120404302|ref|YP_954131.1| translation initiation factor IF-3 [Mycobacterium vanbaalenii PYR-1] gi|119957120|gb|ABM14125.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium vanbaalenii PYR-1] Length = 243 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 75 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E I+ Sbjct: 135 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSA 194 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 195 KQDGRNMTMVLAP 207 >gi|300781276|ref|ZP_07091130.1| translation initiation factor IF3 [Corynebacterium genitalium ATCC 33030] gi|300532983|gb|EFK54044.1| translation initiation factor IF3 [Corynebacterium genitalium ATCC 33030] Length = 129 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 73/123 (59%) Query: 11 LVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLK 70 +VE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K RP ID HD Q K Sbjct: 1 MVEVAPNAKPPVCKIMDYGKYKYEQAQKARESRKNQQQTVVKEQKFRPKIDEHDYQTKKA 60 Query: 71 AIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMI 130 ++ FL G KVK+++ FRGRE +LG LL + E E+ +++ PK +GR M M+ Sbjct: 61 NVERFLEKGNKVKVTIMFRGREQSRPELGYRLLERLAEDIQEVGQVESRPKQDGRNMTMV 120 Query: 131 LSS 133 L Sbjct: 121 LGP 123 >gi|868028|gb|AAC43606.1| integration host factor 3 [Buchnera aphidicola] gi|1098081|prf||2115235C integration host factor 3 Length = 178 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 42 LRKAEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVKI+++FRGRE+ HQ +G ++L+ +K E++ I+ P Sbjct: 102 DEGDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIESFP 161 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 162 SKIEGRQMIMVLAPK 176 >gi|291460372|ref|ZP_06599762.1| translation initiation factor IF-3 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416939|gb|EFE90658.1| translation initiation factor IF-3 [Oribacterium sp. oral taxon 078 str. F0262] Length = 325 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++A+E +LDLV+I ++ P V +I D K RY + + EAR+ Q++T +KE++M P I Sbjct: 191 FRIARELDLDLVKIAATAAPPVVRITDYGKYRYEMLRKEKEARRNQRTTELKEIRMTPNI 250 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL KL A FL G KVKI+++FRGRE+ + + +L + ++ +I+ +D Sbjct: 251 DTNDLNTKLAAARKFLEKGNKVKIALRFRGREMSRMNQSKYILDDFGQQLSDIAVLDKPA 310 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++LS K Sbjct: 311 KVEGRNMAVVLSPK 324 >gi|328947928|ref|YP_004365265.1| Translation initiation factor IF-3 [Treponema succinifaciens DSM 2489] gi|328448252|gb|AEB13968.1| Translation initiation factor IF-3 [Treponema succinifaciens DSM 2489] Length = 176 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLVE+ + P VCKILD K ++ +K +++K QK +KE++M+P I Sbjct: 37 LRMAKDRDLDLVEVSPNANPPVCKILDFGKYKFEQEKKLRDSKKNQKVLKLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR-IDCE 119 DL K K + FL +G KVK++++FRGRE+ H +LG ++L +++R E S I+ Sbjct: 97 GAGDLDTKAKHVQEFLNEGDKVKVTIRFRGRELAHTELGYDVLKEVEKRLVEGSYAIEKP 156 Query: 120 PKFEGRQMIMILSSKC 135 EGR M M L+SK Sbjct: 157 AAMEGRFMSMTLNSKV 172 >gi|260907211|ref|ZP_05915533.1| translation initiation factor IF-3 [Brevibacterium linens BL2] Length = 192 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ P V K++D K +Y + A EARK Q +T +KE++ R I Sbjct: 18 LDLAREADLDLVEVAPQAKPPVAKLMDYGKFKYESAQKAREARKNQANTALKEIRFRLKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G +LL+ + E E+ ++ P Sbjct: 78 DEHDYETKKGHVTRFLSGGDKVKVMIMFRGREQSRPEMGIKLLNRLAEDVSELGTVESSP 137 Query: 121 KFEGRQMIMILS 132 + +GR M+M+++ Sbjct: 138 RVDGRNMVMVIA 149 >gi|296129471|ref|YP_003636721.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM 20109] gi|296021286|gb|ADG74522.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM 20109] Length = 415 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ + P VCKI+D K +Y A EAR+ Q +T +KE++ R I Sbjct: 107 LRLAQDADLDLVEVAPTARPPVCKIMDFGKFKYEADMKAREARRNQANTILKEIRFRLKI 166 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + E+ I+ P Sbjct: 167 DPHDYGTKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGVRLLQRLAADVAELGFIESMP 226 Query: 121 KFEGRQMIMIL 131 K +GR MIM+L Sbjct: 227 KQDGRNMIMVL 237 >gi|153809789|ref|ZP_01962457.1| hypothetical protein RUMOBE_00170 [Ruminococcus obeum ATCC 29174] gi|149833967|gb|EDM89047.1| hypothetical protein RUMOBE_00170 [Ruminococcus obeum ATCC 29174] Length = 164 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELSRKEKEAKKKQKTIDIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ A FL G +VK++++FRGRE+ H + +L + E +++ ++ PK E Sbjct: 93 DLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMASSKHVLDDFAELLADVAVVEKAPKIE 152 Query: 124 GRQMIMILSSK 134 GR M M LS K Sbjct: 153 GRSMTMFLSEK 163 >gi|242239482|ref|YP_002987663.1| translation initiation factor IF-3 [Dickeya dadantii Ech703] gi|242131539|gb|ACS85841.1| translation initiation factor IF-3 [Dickeya dadantii Ech703] Length = 180 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LERAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRVRDDLIELAVVESFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPK 177 >gi|157962083|ref|YP_001502117.1| translation initiation factor IF-3 [Shewanella pealeana ATCC 700345] gi|157847083|gb|ABV87582.1| translation initiation factor IF-3 [Shewanella pealeana ATCC 700345] Length = 158 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+++D K + K E +KKQK +KE+K RP D Sbjct: 24 EVADEAGVDLVEISPNAEPPVCRVMDYGKFLFDKAKAQKEQKKKQKIVQVKEIKFRPGTD 83 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG +LL+ IK I+ ++ PK Sbjct: 84 ENDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQSLGMDLLNRIKADLEVIAVVESFPK 143 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 144 MEGRQAVMVLAPK 156 >gi|253580168|ref|ZP_04857435.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848687|gb|EES76650.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 164 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MFKAQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEAKKKQKTIDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G +VK++++FRGRE+ H R +L + ++ +++ ++ P Sbjct: 90 DTNDLNTKVNAARKFLSKGDRVKVTLRFRGREMAHMASSRHVLDDFAKQLADVATVEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 150 KVEGRSMTMFLTEK 163 >gi|170755251|ref|YP_001782771.1| translation initiation factor IF-3 [Clostridium botulinum B1 str. Okra] gi|169120463|gb|ACA44299.1| translation initiation factor IF-3 [Clostridium botulinum B1 str. Okra] Length = 184 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGVMEKAPK 169 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPR 182 >gi|111017977|ref|YP_700949.1| translation initiation factor IF-3 [Rhodococcus jostii RHA1] gi|110817507|gb|ABG92791.1| translation initiation factor IF-3 [Rhodococcus jostii RHA1] Length = 190 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|330829615|ref|YP_004392567.1| translation initiation factor IF-3 [Aeromonas veronii B565] gi|328804751|gb|AEB49950.1| translation initiation factor IF-3 [Aeromonas veronii B565] Length = 135 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 85/132 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP D Sbjct: 1 MAAEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL DG K K++++FRGRE+ HQDLG ++L +K E++ ++ PK Sbjct: 61 GDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQDLGIKVLERVKNDLEELAVVESFPKV 120 Query: 123 EGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 121 EGRQAVMVLAPK 132 >gi|255994770|ref|ZP_05427905.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC 49989] gi|255993483|gb|EEU03572.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC 49989] Length = 177 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P VCKILD K +Y QK EARKKQK+ +KE+++ I Sbjct: 42 LDIAEEKGLDLVNVSPNAKPPVCKILDYGKFKYDQQKREKEARKKQKTIQVKEIRLSAAI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ VK K FL G KVK++++FRGRE H+++ +L ++ E I+ +P Sbjct: 102 EEHDIDVKAKRACKFLEAGDKVKVTLRFRGRERSHKEVAYAVLEKFAKKAEEFGEIEKKP 161 Query: 121 KFEGRQMIMIL 131 +GR ++M+L Sbjct: 162 TMDGRALVMML 172 >gi|126435575|ref|YP_001071266.1| translation initiation factor 3 [Mycobacterium sp. JLS] gi|126235375|gb|ABN98775.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. JLS] Length = 238 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 79 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 139 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFVETSA 198 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 199 KQDGRNMTMVLAP 211 >gi|256827013|ref|YP_003150972.1| translation initiation factor 3 [Cryptobacterium curtum DSM 15641] gi|256583156|gb|ACU94290.1| bacterial translation initiation factor 3 (bIF-3) [Cryptobacterium curtum DSM 15641] Length = 207 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 78/131 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A A LDLVEI + P VC+++D K +Y A +ARK Q IKE+K RP ID Sbjct: 51 HVADMAGLDLVEIAPNAQPPVCRVMDYGKFKYEQAIKAKQARKNQSKIEIKEMKFRPKID 110 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K K + FL G KVKI++ FRGRE+ H + G +L + + +++ I+ +PK Sbjct: 111 VGDYTTKKKHVIRFLEQGNKVKITIMFRGREMAHPEQGLSILERLADDLKDMAAIEAQPK 170 Query: 122 FEGRQMIMILS 132 EGR M M+++ Sbjct: 171 MEGRNMHMVIA 181 >gi|297183197|gb|ADI19338.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0500_03A04] Length = 155 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVE+ P VC+++D K +Y K A++ QK T +KEVK +P I Sbjct: 18 LEKAQTDGLDLVEVSPKARPPVCRLMDFGKYKYQQSKRTHAAKQNQKITRLKEVKFKPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVKI V F GR + H+D+GR LL+ E GE S ++ Sbjct: 78 EEHDYQFKLRNALRFLDDGDKVKIKVVFYGRMMAHKDMGRVLLNKFLEEVGERSVVEQPI 137 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 138 MDEGRNMFMILAP 150 >gi|108799947|ref|YP_640144.1| translation initiation factor 3 [Mycobacterium sp. MCS] gi|119869057|ref|YP_939009.1| translation initiation factor 3 [Mycobacterium sp. KMS] gi|108770366|gb|ABG09088.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. MCS] gi|119695146|gb|ABL92219.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. KMS] Length = 238 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 79 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 139 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFVETSA 198 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 199 KQDGRNMTMVLAP 211 >gi|295397489|ref|ZP_06807572.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563] gi|294974289|gb|EFG50033.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563] Length = 198 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++ LDLV + + P V +I+D K RY Q+ E R+ QK +KEV++ P I+ + Sbjct: 65 AEQVELDLVLVSPNAKPPVARIMDYGKYRYEQQRKEREQRQNQKQVSLKEVRLSPTIEQN 124 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL+ FL G KVK S++FRGR I H+++GRE+L E +++ ++ PK E Sbjct: 125 DFDTKLRQARKFLEKGDKVKASIRFRGRAITHKEIGREVLERFAEELKDVAEVEQRPKME 184 Query: 124 GRQMIMILS 132 GR M + ++ Sbjct: 185 GRSMFLQMA 193 >gi|311742378|ref|ZP_07716187.1| translation initiation factor IF3 [Aeromicrobium marinum DSM 15272] gi|311314006|gb|EFQ83914.1| translation initiation factor IF3 [Aeromicrobium marinum DSM 15272] Length = 225 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ + P VC+++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 31 LRLAAESDLDLVEVAPTARPPVCRLMDYGKFKYEAAQKARESRRNQTNTVIKEMKLRPKI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 91 DQHDYDTKKGHVVRFLKAGDKVKITIMFRGREQHRPELGFRLLQRLAADVEDLGFIESHP 150 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L Sbjct: 151 RQDGRNMTMVLGP 163 >gi|226360108|ref|YP_002777886.1| translation initiation factor IF-3 [Rhodococcus opacus B4] gi|226238593|dbj|BAH48941.1| translation initiation factor IF-3 [Rhodococcus opacus B4] Length = 215 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 35 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 95 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|152979114|ref|YP_001344743.1| translation initiation factor IF-3 [Actinobacillus succinogenes 130Z] gi|150840837|gb|ABR74808.1| translation initiation factor IF-3 [Actinobacillus succinogenes 130Z] Length = 182 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D Sbjct: 49 AEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEG 108 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+ I FL DG KVKI+V+FRGRE+ HQD+G ++L +K+ E++ ++ P K Sbjct: 109 DYQVKLRNILRFLEDGDKVKITVRFRGREMAHQDIGLDVLERVKQDTAEVAMVESAPGKL 168 Query: 123 EGRQMIMILSSK 134 EGRQ +M+++ K Sbjct: 169 EGRQAVMVIAPK 180 >gi|168039904|ref|XP_001772436.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676233|gb|EDQ62718.1| predicted protein [Physcomitrella patens subsp. patens] Length = 421 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 7/139 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +Q A+ A+LDLV I P VC+I+D K RY QK EA+KK ++ +KE+K+R Sbjct: 226 LQRARNADLDLVAISLDADPPVCRIMDYSKFRYEAQKKKREAQKKALASRQDLKELKIRY 285 Query: 59 VIDLHDLQVKLKAIDGFLRDG-----CKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 ID+HD V+L++ FL+DG C VK+ +F+GRE+ +DL +L + GE+ Sbjct: 286 NIDVHDYDVRLRSAKKFLKDGDKVDICHVKVVCQFKGREMDFKDLAFKLFQRFIDDVGEL 345 Query: 114 SRIDCEPKFEGRQMIMILS 132 I+ +P EGRQMIM+L Sbjct: 346 GLIESKPAIEGRQMIMMLG 364 >gi|46446336|ref|YP_007701.1| translation initiation factor IF-3 [Candidatus Protochlamydia amoebophila UWE25] gi|46399977|emb|CAF23426.1| probable translation initiation factor IF-3 [Candidatus Protochlamydia amoebophila UWE25] Length = 184 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI +P VCK+++ K RY K E +K Q +KE+K++P I Sbjct: 31 LAMAEEHGLDLVEIVPGSSPPVCKVMNFGKFRYDQSKREKENKKAQHQIKVKEIKLKPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL+ K + FL G KVK++ FRGRE+MH ++G +++ + + +IS + Sbjct: 91 DVHDLETKTRHARDFLASGNKVKVTCTFRGREMMHPEIGEKIVREMCQELEDISTPESPA 150 Query: 121 KFEGRQMIMILSS 133 K GR ++++L+ Sbjct: 151 KMMGRMLLVVLAP 163 >gi|163782696|ref|ZP_02177692.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] gi|159881817|gb|EDP75325.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] Length = 175 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 +++A+E LDLVEI P VCKI+D K +Y ++K EARKKQK I K+++M+ Sbjct: 37 LKLAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREARKKQKEHQIEVKDIRMKV 96 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL DG KV++ ++FRGRE +H +LG +L I E G++ ++ Sbjct: 97 RIDEHDLKVKLKHMREFLEDGDKVRVRIRFRGRENIHPELGEKLFKKIVEELGDVGEVEV 156 Query: 119 EPKFEGRQMIMILSSK 134 +PK EG ++ L+ K Sbjct: 157 KPKKEGPFLLFTLAPK 172 >gi|205374568|ref|ZP_03227364.1| translation initiation factor IF-3 [Bacillus coahuilensis m4-4] Length = 189 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P V +I+D K ++ QK EARK QK +KEV++ P I Sbjct: 53 LEIAGRVNLDLVLVAPNAKPPVARIMDYGKYKFEQQKKDKEARKNQKIINLKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+++G+ +L E +++ I+ +P Sbjct: 113 EEHDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACKDVATIESKP 172 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLA 184 >gi|52425109|ref|YP_088246.1| InfC protein [Mannheimia succiniciproducens MBEL55E] gi|52307161|gb|AAU37661.1| InfC protein [Mannheimia succiniciproducens MBEL55E] Length = 137 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 1 MSRAEEVELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ I FL DG KVKI+V+FRGRE+ HQD+G ++L +K+ EI+ ++ P Sbjct: 61 DEGDYQVKLRNIVRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKQDTAEIAMVESAP 120 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+++ K Sbjct: 121 GKLEGRQAVMVIAPK 135 >gi|171463691|ref|YP_001797804.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193229|gb|ACB44190.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 169 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 77/124 (62%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P V +I+D K +Y K EA+ KQK +KEVK RP D D VKL Sbjct: 41 DLVEIVPTAVPPVVRIMDFGKFKYQEAKRMHEAKLKQKVIQVKEVKFRPGTDDGDYGVKL 100 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 + + FL DG K KI+++FRGRE+ HQ++G +L +K E +++ PK EGRQM+M Sbjct: 101 RNLIRFLEDGDKTKITLRFRGREMAHQEIGVRILERLKLDLVEYGQVEQFPKMEGRQMVM 160 Query: 130 ILSS 133 +L+ Sbjct: 161 VLAP 164 >gi|118469171|ref|YP_888086.1| translation initiation factor IF-3 [Mycobacterium smegmatis str. MC2 155] gi|118170458|gb|ABK71354.1| translation initiation factor IF-3 [Mycobacterium smegmatis str. MC2 155] Length = 206 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 47 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYETAQKARESRKNQQQTVVKEQKLRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 107 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 166 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 167 KQDGRNMTMVLAP 179 >gi|296140120|ref|YP_003647363.1| translation initiation factor IF-3 [Tsukamurella paurometabola DSM 20162] gi|296028254|gb|ADG79024.1| translation initiation factor IF-3 [Tsukamurella paurometabola DSM 20162] Length = 196 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCKI+D K +Y + E+RK Q+ T IKE K+RP I Sbjct: 35 LKLAYEADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKQRESRKNQQMTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E I+ Sbjct: 95 DDHDYETKKGHVVRFLEQGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|284991466|ref|YP_003410020.1| translation initiation factor IF-3 [Geodermatophilus obscurus DSM 43160] gi|284064711|gb|ADB75649.1| translation initiation factor IF-3 [Geodermatophilus obscurus DSM 43160] Length = 212 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ++ LDLVE+ P V K++D K +Y + A EAR+ Q T IKE+++R I Sbjct: 53 LRLAQDSELDLVEVAPMAKPPVAKLMDYGKFKYESAQKAREARRNQALTVIKEMRLRLKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVKI+V FRGRE ++G LL + + E+ ++ P Sbjct: 113 DPHDYETKKGHVERFLRSGDKVKITVMFRGREQSRPEMGYRLLQRLAQDVSELGVVESNP 172 Query: 121 KFEGRQMIMILS 132 K +GR M+M+++ Sbjct: 173 KQDGRNMVMVIA 184 >gi|119774901|ref|YP_927641.1| translation initiation factor IF-3 [Shewanella amazonensis SB2B] gi|119767401|gb|ABL99971.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella amazonensis SB2B] Length = 150 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 87/133 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 16 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 75 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ+LG +L++ IK E + ++ PK Sbjct: 76 ENDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQNLGMDLMNRIKADLEEYAVVESFPK 135 Query: 122 FEGRQMIMILSSK 134 EGRQ IM+L+ K Sbjct: 136 MEGRQAIMVLAPK 148 >gi|296119682|ref|ZP_06838240.1| translation initiation factor IF-3 [Corynebacterium ammoniagenes DSM 20306] gi|295967565|gb|EFG80832.1| translation initiation factor IF-3 [Corynebacterium ammoniagenes DSM 20306] Length = 156 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 76/132 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 19 KLAFEADLDLVEVAPNAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E E ++ PK Sbjct: 79 DHDYETKKANVVRFLEKGSKVKVTIMFRGREQSRPELGYRLLERLAEDVAESGIVESRPK 138 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 139 QDGRNMTMVFGP 150 >gi|319949970|ref|ZP_08023959.1| translation initiation factor IF-3 [Dietzia cinnamea P4] gi|319436366|gb|EFV91497.1| translation initiation factor IF-3 [Dietzia cinnamea P4] Length = 163 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCKI+D K +Y + E+RK Q+ T +KE K+RP I Sbjct: 10 LRLALEADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKERESRKNQQQTVVKEQKLRPKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E ++ Sbjct: 70 DTHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLQRLADDITEYGYVETSA 129 Query: 121 KFEGRQMIMILS 132 K +GR M M+++ Sbjct: 130 KQDGRNMTMVVA 141 >gi|257784327|ref|YP_003179544.1| translation initiation factor IF-3 [Atopobium parvulum DSM 20469] gi|257472834|gb|ACV50953.1| translation initiation factor IF-3 [Atopobium parvulum DSM 20469] Length = 193 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E LDLVEI + P VCKILD K +Y + A ARK Q +KE+K RP I Sbjct: 40 MKRAREHGLDLVEIAPNAEPPVCKILDYSKFKYEQARKAKAARKNQVKIEVKEMKFRPKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D + K + FL+ G +VKI++ FRGRE+ H + GR +L + E + I+ +P Sbjct: 100 DVGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGRIVLDRLAEDLKPYATIEQKP 159 Query: 121 KFEGRQMIMILSS 133 EGR M M+++ Sbjct: 160 LIEGRNMHMLVAP 172 >gi|197334910|ref|YP_002156017.1| translation initiation factor IF-3 [Vibrio fischeri MJ11] gi|197316400|gb|ACH65847.1| translation initiation factor IF-3 [Vibrio fischeri MJ11] Length = 156 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP Sbjct: 20 LDAALEAGVDLVEISPNAEPPVCRVMDYGKFLFEKAKAAKEQKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 80 DIGDYQVKLRNLTGFLEDGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 139 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 140 TRIEGRQMIMVLAPK 154 >gi|221194539|ref|ZP_03567596.1| translation initiation factor IF-3 [Atopobium rimae ATCC 49626] gi|221185443|gb|EEE17833.1| translation initiation factor IF-3 [Atopobium rimae ATCC 49626] Length = 160 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VCKILD K RY + A ARK Q +KE+K RP I Sbjct: 5 LKRAREHGMDLVEIAPNAEPPVCKILDYSKFRYEQDRKAKAARKNQVKIEVKEMKFRPKI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D + K + FL+ G +VKI++ FRGRE+ H + GR +L + E + I+ +P Sbjct: 65 DVGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGRLVLDRLAEDLKPYATIEQKP 124 Query: 121 KFEGRQMIMILSS 133 EGR M M+++ Sbjct: 125 LMEGRNMHMLVAP 137 >gi|40062535|gb|AAR37480.1| translation initiation factor IF-3 [uncultured marine bacterium 106] Length = 130 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 74/125 (59%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVE+ P VC+++D K +Y K AR+ QK +KEVKM+P I+ HD Q K Sbjct: 1 MDLVEVSPKAKPPVCRLMDYGKFKYQQSKQNHVARQNQKVVHLKEVKMKPKIEKHDFQFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ ++ EGR M Sbjct: 61 LRNALRFLEDGDKVKVGVRFMGRQIAHKDLGVELLEKFQAEIGDDGTVEQPISSEGRSMH 120 Query: 129 MILSS 133 MIL+ Sbjct: 121 MILAP 125 >gi|268592568|ref|ZP_06126789.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] gi|291311982|gb|EFE52435.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] Length = 143 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQQIGLEMLNRIKADLEELASVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 127 SRIEGRQMIMVLAPK 141 >gi|94986657|ref|YP_594590.1| translation initiation factor IF-3 [Lawsonia intracellularis PHE/MN1-00] gi|94730906|emb|CAJ54269.1| translation initiation factor 3 (IF-3) [Lawsonia intracellularis PHE/MN1-00] Length = 158 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVE+ ++ P VC+I+D K +Y QK EA+K+Q IKE+K+RP Sbjct: 20 IAIAKEHGLDLVEVAATADPPVCRIMDYGKFKYEAQKKKQEAKKRQTIVQIKEIKIRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ I FL +G +VK++V FRGREI+H+D G +L I E+ +++ EP Sbjct: 80 DEHDFETKVRHIKRFLEEGDRVKVTVFFRGREIVHKDRGIVILERIILETKEVGKVEQEP 139 Query: 121 KFEGRQMIMILSS 133 K EGR + M+L+ Sbjct: 140 KAEGRTLQMLLAP 152 >gi|294054379|ref|YP_003548037.1| translation initiation factor IF-3 [Coraliomargarita akajimensis DSM 45221] gi|293613712|gb|ADE53867.1| translation initiation factor IF-3 [Coraliomargarita akajimensis DSM 45221] Length = 209 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ LDL+EI P VC+ILD K Y K + KQ +T +KEVK R I Sbjct: 51 LALAQKVGLDLIEISPGARPPVCRILDFGKFLYEESKKQKDT--KQATTKLKEVKFRIGI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ +GFL +G KVK+S++FRGRE H +LG ++ ++ +S D E Sbjct: 109 DAHDFETKIRRAEGFLYNGNKVKLSLQFRGRENEHPELGIARINQARDELSGVSSPDGEA 168 Query: 121 KFEGRQMIMILSS 133 + GRQ+I+ILS Sbjct: 169 RHVGRQVILILSP 181 >gi|194333012|ref|YP_002014872.1| translation initiation factor IF-3 [Prosthecochloris aestuarii DSM 271] gi|226707358|sp|B4S3D1|IF3_PROA2 RecName: Full=Translation initiation factor IF-3 gi|194310830|gb|ACF45225.1| translation initiation factor IF-3 [Prosthecochloris aestuarii DSM 271] Length = 197 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ LDL+E+ + P VCK+ + KL+Y + KN + +KK K T +KE++ P D Sbjct: 45 KMAEQEGLDLIEVQPTAQPPVCKMDNYGKLQYKLDKNEKDRKKKSKPTELKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL+ +KER +S + E K Sbjct: 105 THDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELVERLKERLSNVSNPEGEAK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKRLFIYFEP 176 >gi|166154177|ref|YP_001654295.1| translation initiation factor IF-3 [Chlamydia trachomatis 434/Bu] gi|166155052|ref|YP_001653307.1| translation initiation factor IF-3 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335422|ref|ZP_07223666.1| translation initiation factor IF-3 [Chlamydia trachomatis L2tet1] gi|165930165|emb|CAP03649.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis 434/Bu] gi|165931040|emb|CAP06603.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 186 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY I K +++K Q IKEVK++P I Sbjct: 35 LDLAKEADLDLVEVASNSEPPVCKIMDYGKYRYDITKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVVQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 155 KLNGRSLICVIA 166 >gi|118586725|ref|ZP_01544162.1| translation initiation factor IF-3 [Oenococcus oeni ATCC BAA-1163] gi|118432813|gb|EAV39542.1| translation initiation factor IF-3 [Oenococcus oeni ATCC BAA-1163] Length = 204 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 84/132 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A + NLDLV + + P V +I+D K+++ QK E +KKQ KEV++ PVI Sbjct: 48 IADQRNLDLVIVQAKAQPPVARIMDWGKVKFEQQKKIRENKKKQVIVQTKEVRLSPVIGE 107 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 108 GDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQL 167 Query: 123 EGRQMIMILSSK 134 GRQM ++LS K Sbjct: 168 LGRQMSLLLSPK 179 >gi|139437957|ref|ZP_01771510.1| Hypothetical protein COLAER_00496 [Collinsella aerofaciens ATCC 25986] gi|133776154|gb|EBA39974.1| Hypothetical protein COLAER_00496 [Collinsella aerofaciens ATCC 25986] Length = 189 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 78/131 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + LDLVEI + P VCK++D K +Y A ARK Q +KE+K RP ID Sbjct: 43 RVADDQGLDLVEIAPNAEPPVCKVMDYGKFKYQQAMKAKAARKNQSKVEVKEMKFRPKID 102 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 103 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPYATVESKPK 162 Query: 122 FEGRQMIMILS 132 EGR M+M+L+ Sbjct: 163 MEGRNMLMLLA 173 >gi|260219597|emb|CBA26442.1| Translation initiation factor IF-3 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 179 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKE+K RP Sbjct: 29 LRMAGDLDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEIKFRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ++G +L +++ G+ ++ P Sbjct: 89 DDGDYNIKMRNIKRFLADGDKCKITLRFRGREITHQEIGLAMLQRMRDELGDTIIVEQFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 149 KLEGRQMIMMIAP 161 >gi|297569215|ref|YP_003690559.1| translation initiation factor IF-3 [Desulfurivibrio alkaliphilus AHT2] gi|296925130|gb|ADH85940.1| translation initiation factor IF-3 [Desulfurivibrio alkaliphilus AHT2] Length = 180 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 85/131 (64%), Gaps = 1/131 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E+ LDLVE+ + P VC+I+D K RY + K +A+KKQ +KE+K+RP + H Sbjct: 48 AEESGLDLVEVSPTAKPPVCRIMDYGKYRYELSKKQQDAKKKQAVVEVKEIKLRPKTEKH 107 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCEPKF 122 DL K+K I FL KVK++++FRGREI++ D LG E+L+ I + E++ + PK Sbjct: 108 DLDFKIKNIKKFLDQNNKVKVTLRFRGREIVYADTLGVEVLNRIAQELTEVATVLQAPKM 167 Query: 123 EGRQMIMILSS 133 EGRQM M++ Sbjct: 168 EGRQMTMLVGP 178 >gi|212711439|ref|ZP_03319567.1| hypothetical protein PROVALCAL_02512 [Providencia alcalifaciens DSM 30120] gi|212685895|gb|EEB45423.1| hypothetical protein PROVALCAL_02512 [Providencia alcalifaciens DSM 30120] Length = 143 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIKSDLEELASVESFP 126 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 SKIEGRQMIMVLAPK 141 >gi|118466944|ref|YP_882311.1| translation initiation factor IF-3 [Mycobacterium avium 104] gi|254775577|ref|ZP_05217093.1| translation initiation factor IF-3 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168231|gb|ABK69128.1| translation initiation factor IF-3 [Mycobacterium avium 104] Length = 173 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|301167261|emb|CBW26843.1| translation initiation factor if-3 [Bacteriovorax marinus SJ] Length = 198 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 87/134 (64%), Gaps = 7/134 (5%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A + LDLVE+ + P V K++D K +Y QK A EA+KKQ +KE++ RP I+ Sbjct: 47 IASDLGLDLVEVSPTAKPPVVKVIDYGKFKYDQQKKANEAKKKQAQVSLKEIQFRPNIEA 106 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLG----RELLSNIKERFGEISRIDC 118 HDL+ KLK + FL G K+K+ ++FRGRE+ ++DLG +++L+ ++E S+++ Sbjct: 107 HDLETKLKRAEKFLGQGDKIKMVMQFRGREMAYKDLGLSKFKDILATVEEMG---SQVES 163 Query: 119 EPKFEGRQMIMILS 132 EPK G ++I I++ Sbjct: 164 EPKMMGNRIITIVA 177 >gi|317499155|ref|ZP_07957432.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 5_1_63FAA] gi|291560798|emb|CBL39598.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SSC/2] gi|316893568|gb|EFV15773.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 165 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I P VCKI+D K +Y + A+KKQK +KEV+M P ID Sbjct: 31 KLADEAGLDLVKISPKAKPPVCKIIDYGKYKYEQTRKEKLAKKKQKVIDVKEVRMSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G +VK++++FRGRE+ H + + +L + + +++ ID +PK Sbjct: 91 TNDLNTKINHAKKFLAKGARVKVTLRFRGRELAHVNASKYILDDFAKALEDVATIDKKPK 150 Query: 122 FEGRQMIMILSSK 134 FEGR M M L+ K Sbjct: 151 FEGRSMTMFLAPK 163 >gi|251792478|ref|YP_003007204.1| translation initiation factor IF-3 [Aggregatibacter aphrophilus NJ8700] gi|247533871|gb|ACS97117.1| translation initiation factor IF-3 [Aggregatibacter aphrophilus NJ8700] Length = 159 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D D QVKL Sbjct: 32 DLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKL 91 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMI 128 +++ FL DG K KI+++FRGRE+ HQ +G E+L IK EIS ++ P K EGRQM+ Sbjct: 92 RSLIRFLEDGDKAKITLRFRGREMAHQQIGTEMLERIKNDLAEISVVESAPGKLEGRQMV 151 Query: 129 MILSSK 134 M+L+ K Sbjct: 152 MVLAPK 157 >gi|307153320|ref|YP_003888704.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822] gi|306983548|gb|ADN15429.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822] Length = 177 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P VC+++D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 43 LRIAEEKELDLVLVSETANPPVCRVMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL + EI+ + P Sbjct: 103 DDHDYNVRVNQAQRFLKSGDKVKATITFRGREIQHANLAEELLQRMANDLQEIAEVQQAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 163 KKEGRNMMMLLSPK 176 >gi|322807447|emb|CBZ05021.1| translation initiation factor 3 [Clostridium botulinum H04402 065] Length = 165 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK +KEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKIINLKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ + E I+ PK Sbjct: 90 AHDIEIKANNAKKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYAKVEEAGVIEKAPK 149 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPR 162 >gi|14194828|sp|Q9CC22|IF3_MYCLE RecName: Full=Translation initiation factor IF-3 Length = 202 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEVAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 95 DDHDYETKKSHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 154 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLA 166 >gi|153004742|ref|YP_001379067.1| translation initiation factor IF-3 [Anaeromyxobacter sp. Fw109-5] gi|166198947|sp|A7HBI7|IF3_ANADF RecName: Full=Translation initiation factor IF-3 gi|152028315|gb|ABS26083.1| translation initiation factor IF-3 [Anaeromyxobacter sp. Fw109-5] Length = 229 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/130 (44%), Positives = 83/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE +DLVE+ P VCKI+D K +Y +K EA+KKQ +KEVK+RP + H Sbjct: 49 AQELGMDLVEVSPMAKPPVCKIMDYGKFKYLEKKKQNEAKKKQVVVQLKEVKLRPRTEEH 108 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K + FL + K +I+V FRGRE+ H++LG+++L I E E++ I+ P+ E Sbjct: 109 DYATKIKKVREFLGESNKARITVTFRGREMSHRELGQKVLQRIIEDLREVAVIEAAPRME 168 Query: 124 GRQMIMILSS 133 GRQM MIL+ Sbjct: 169 GRQMFMILAP 178 >gi|296164540|ref|ZP_06847111.1| translation initiation factor IF3 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900140|gb|EFG79575.1| translation initiation factor IF3 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 213 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 47 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 107 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 166 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 167 KQDGRNMTMVLAP 179 >gi|41407450|ref|NP_960286.1| translation initiation factor IF-3 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395802|gb|AAS03669.1| InfC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 184 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 78 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|254821220|ref|ZP_05226221.1| translation initiation factor IF-3 [Mycobacterium intracellulare ATCC 13950] Length = 173 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|294636228|ref|ZP_06714642.1| translation initiation factor IF-3 [Edwardsiella tarda ATCC 23685] gi|291090485|gb|EFE23046.1| translation initiation factor IF-3 [Edwardsiella tarda ATCC 23685] Length = 152 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 135 TKIEGRQMIMVLAPK 149 >gi|15827729|ref|NP_301992.1| translation initiation factor IF-3 [Mycobacterium leprae TN] gi|221230206|ref|YP_002503622.1| translation initiation factor IF-3 [Mycobacterium leprae Br4923] gi|13093280|emb|CAC31775.1| initiation factor 3 [Mycobacterium leprae] gi|219933313|emb|CAR71489.1| initiation factor 3 [Mycobacterium leprae Br4923] Length = 185 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEVAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 78 DDHDYETKKSHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 137 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLA 149 >gi|315604407|ref|ZP_07879473.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180 str. F0310] gi|315314113|gb|EFU62164.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180 str. F0310] Length = 195 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 17 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + E GE++ ++ P Sbjct: 77 DDHDFGVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLQRLAEEIGELATVESMP 136 Query: 121 KFEGRQMIMILS 132 + +GR M M+L+ Sbjct: 137 RQDGRNMTMVLA 148 >gi|166365759|ref|YP_001658032.1| translation initiation factor IF-3 [Microcystis aeruginosa NIES-843] gi|189028354|sp|B0JKQ1|IF3_MICAN RecName: Full=Translation initiation factor IF-3 gi|166088132|dbj|BAG02840.1| initiation factor IF-3 [Microcystis aeruginosa NIES-843] Length = 176 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + +P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 42 LRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQHTADIKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL+ + + +++ + P Sbjct: 102 DEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 162 KKEGRNMMMMLSPK 175 >gi|15616746|ref|NP_239958.1| translation initiation factor IF-3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11132699|sp|P57226|IF3_BUCAI RecName: Full=Translation initiation factor IF-3 gi|25299567|pir||D84944 translation initiation factor IF-3 [imported] - Buchnera sp. (strain APS) gi|10038809|dbj|BAB12844.1| translation initiation factor IF-3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 179 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++E LDLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP Sbjct: 43 LKKSEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIMIL+ K Sbjct: 163 SKIEGRQMIMILAPK 177 >gi|238919783|ref|YP_002933298.1| translation initiation factor IF-3, [Edwardsiella ictaluri 93-146] gi|238869352|gb|ACR69063.1| translation initiation factor IF-3, putative [Edwardsiella ictaluri 93-146] Length = 152 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 135 SKIEGRQMIMVLAPK 149 >gi|255326345|ref|ZP_05367429.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296] gi|255296562|gb|EET75895.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296] Length = 233 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 52 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAIKARESRKKQANAVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E+S ++ P Sbjct: 112 DTHDYETKVGHARRFLSGGDKVKAMIQFRGREQQRPEMGVRLLERLAAELAEVSTVESRP 171 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 172 RQDGRNMVMVLAP 184 >gi|219681501|ref|YP_002467886.1| translation initiation factor IF-3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682057|ref|YP_002468441.1| translation initiation factor IF-3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254803482|sp|B8D8S7|IF3_BUCA5 RecName: Full=Translation initiation factor IF-3 gi|254803483|sp|B8D731|IF3_BUCAT RecName: Full=Translation initiation factor IF-3 gi|219621790|gb|ACL29946.1| translation initiation factor IF-3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624344|gb|ACL30499.1| translation initiation factor IF-3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 179 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++E LDLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP Sbjct: 43 LKKSEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFP 162 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIMIL+ K Sbjct: 163 SKIEGRQMIMILAPK 177 >gi|283458461|ref|YP_003363087.1| translation initiation factor 3 [Rothia mucilaginosa DY-18] gi|283134502|dbj|BAI65267.1| translation initiation factor 3 [Rothia mucilaginosa DY-18] Length = 258 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 77 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAIKARESRKKQANAVLKEIRFRLKI 136 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E+S ++ P Sbjct: 137 DTHDYETKVGHARRFLSGGDKVKAMIQFRGREQQRPEMGVRLLERLAAELAEVSTVESRP 196 Query: 121 KFEGRQMIMILS 132 + +GR M+M+L+ Sbjct: 197 RQDGRNMVMVLA 208 >gi|67920432|ref|ZP_00513952.1| Initiation factor 3 [Crocosphaera watsonii WH 8501] gi|67857916|gb|EAM53155.1| Initiation factor 3 [Crocosphaera watsonii WH 8501] Length = 179 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LKVAQERELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L ++LLS + E++ I P Sbjct: 102 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQDLLSRMATDLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPK 175 >gi|183982462|ref|YP_001850753.1| initiation factor IF-3 InfC [Mycobacterium marinum M] gi|183175788|gb|ACC40898.1| initiation factor IF-3 InfC [Mycobacterium marinum M] Length = 167 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|167767664|ref|ZP_02439717.1| hypothetical protein CLOSS21_02197 [Clostridium sp. SS2/1] gi|167710681|gb|EDS21260.1| hypothetical protein CLOSS21_02197 [Clostridium sp. SS2/1] Length = 191 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I P VCKI+D K +Y + A+KKQK +KEV+M P ID Sbjct: 57 KLADEAGLDLVKISPKAKPPVCKIIDYGKYKYEQTRKEKLAKKKQKVIDVKEVRMSPNID 116 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G +VK++++FRGRE+ H + + +L + + +++ ID +PK Sbjct: 117 TNDLNTKINHAKKFLAKGARVKVTLRFRGRELAHVNASKYILDDFAKALEDVATIDKKPK 176 Query: 122 FEGRQMIMILSSK 134 FEGR M M L+ K Sbjct: 177 FEGRSMTMFLAPK 189 >gi|113461020|ref|YP_719087.1| translation initiation factor IF-3 [Haemophilus somnus 129PT] gi|112823063|gb|ABI25152.1| bacterial translation initiation factor 3 (bIF-3) [Haemophilus somnus 129PT] Length = 159 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++A+LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LNIAEQADLDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +I+ ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDMLERVKNDLADIAVVESAP 142 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPK 157 >gi|159030118|emb|CAO91010.1| infC [Microcystis aeruginosa PCC 7806] Length = 176 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + +P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 42 LRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQHTADIKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL+ + + +++ + P Sbjct: 102 DEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLEDVAEVQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 162 KKEGRNMMMMLSPK 175 >gi|150389420|ref|YP_001319469.1| translation initiation factor IF-3 [Alkaliphilus metalliredigens QYMF] gi|149949282|gb|ABR47810.1| translation initiation factor IF-3 [Alkaliphilus metalliredigens QYMF] Length = 142 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A E NLDLV+I P VCKI+D K +Y + K EA+KKQK +KEV++ P I Sbjct: 7 LQIASEKNLDLVKISPQAKPPVCKIMDYGKFKYELAKKDKEAKKKQKVVTVKEVRLSPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD++VK K FL G KVK++++FRGRE+ + + GR++++ K+ E+S ++ P Sbjct: 67 EAHDVEVKCKRALKFLESGDKVKVTLRFRGRELGNIEAGRKVINQFKDMLTEVSTVEKYP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 127 KMEGRQMIMVLAPK 140 >gi|90417312|ref|ZP_01225238.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2207] gi|90330897|gb|EAS46160.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2207] Length = 155 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDLVEI P VCKI+D K + I+K +KKQK T +KE+K RP Sbjct: 18 LEAAQKETLDLVEISPDAEPPVCKIMDYGKHVFDIKKKVALQKKKQKQTQVKEMKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL +G K KIS++FRGRE+ HQ LG +++ I+ E+++++ P Sbjct: 78 DQGDYDIKLRNLVRFLENGDKAKISLRFRGREMAHQQLGMDMMKRIEADLAELAQVEQFP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+LS + Sbjct: 138 KMEGRQMIMVLSPRS 152 >gi|307102855|gb|EFN51121.1| hypothetical protein CHLNCDRAFT_141304 [Chlorella variabilis] Length = 380 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 5/135 (3%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRPVID 61 A+ +DL+ I P V +I++ K Y ++K A EA++KQ+ + KEVK+RP D Sbjct: 243 ARSLGMDLIMIVPDAAPPVVRIMEFSKYNYELEKAAKEAKRKQREAVVETKEVKLRPATD 302 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDCE 119 +HD QVK+KA FL G +VK++++FRGRE+ Q +GRE+ E G ++S I+ Sbjct: 303 VHDYQVKVKAAQKFLGKGHRVKLTLQFRGREMEFQQIGREMFQRFVEDCGGSDVS-IEQP 361 Query: 120 PKFEGRQMIMILSSK 134 P+ +GRQM M+LS K Sbjct: 362 PQMQGRQMTMLLSRK 376 >gi|166032010|ref|ZP_02234839.1| hypothetical protein DORFOR_01712 [Dorea formicigenerans ATCC 27755] gi|166028463|gb|EDR47220.1| hypothetical protein DORFOR_01712 [Dorea formicigenerans ATCC 27755] Length = 164 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRISPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E E++ ++ Sbjct: 90 DTNDLNTKVNNAKKFIAKGNKVKVTLRFRGREMAHMQQSKHILDDFAEMLAEVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|145224126|ref|YP_001134804.1| initiation factor 3 [Mycobacterium gilvum PYR-GCK] gi|145216612|gb|ABP46016.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium gilvum PYR-GCK] Length = 175 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 67 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|169629407|ref|YP_001703056.1| translation initiation factor IF-3 (InfC) [Mycobacterium abscessus ATCC 19977] gi|169241374|emb|CAM62402.1| Translation initiation factor IF-3 (InfC) [Mycobacterium abscessus] Length = 176 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 67 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|297182916|gb|ADI19065.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0070_15B21] Length = 166 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++EA +DLVE+ P VC+++D K +Y K AR+ QK+ +KEVKM+P I Sbjct: 29 LEQSEEAGMDLVEVSPKANPPVCRMMDFGKFKYQQSKKQHAARQNQKTIHLKEVKMKPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ FL +G KVK+++ F GR + H+DLG L+ + GE ++ Sbjct: 89 EEHDFQFKVRNALRFLEEGDKVKVNIMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPV 148 Query: 121 KFEGRQMIMILSS 133 + EGR M MI++ Sbjct: 149 RNEGRSMFMIMAP 161 >gi|118617266|ref|YP_905598.1| initiation factor IF-3 InfC [Mycobacterium ulcerans Agy99] gi|118569376|gb|ABL04127.1| initiation factor IF-3 InfC [Mycobacterium ulcerans Agy99] Length = 178 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 78 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|237808485|ref|YP_002892925.1| translation initiation factor IF-3 [Tolumonas auensis DSM 9187] gi|237500746|gb|ACQ93339.1| translation initiation factor IF-3 [Tolumonas auensis DSM 9187] Length = 179 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A +DLVEI + P VC+I+D K Y K+ E +KK K IKE+K RP Sbjct: 44 LDAAIKAGVDLVEISPTAEPPVCRIMDFGKFLYEKSKSVKEQKKKTKQIQIKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQDLG +L +K EI+ ++ P Sbjct: 104 DEGDYQVKLRNLIRFLEEGDKAKVTLRFRGREMAHQDLGMNVLERVKADLEEIAVVESFP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQ +M+L+ K Sbjct: 164 RVEGRQAVMMLAPK 177 >gi|259505617|ref|ZP_05748519.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] gi|29427498|sp|Q8FTQ2|IF3_COREF RecName: Full=Translation initiation factor IF-3 gi|259166782|gb|EEW51336.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] Length = 203 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 77/131 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 66 KLAFDADLDLVEVAPTAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 125 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ K Sbjct: 126 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVAEYGVVETRAK 185 Query: 122 FEGRQMIMILS 132 +GR M M++ Sbjct: 186 QDGRNMTMVIG 196 >gi|288940716|ref|YP_003442956.1| translation initiation factor IF-3 [Allochromatium vinosum DSM 180] gi|288896088|gb|ADC61924.1| translation initiation factor IF-3 [Allochromatium vinosum DSM 180] Length = 177 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+++D + + +K EA+KKQK IKEVK RP Sbjct: 42 IAMAEEAGLDLVEIVPTSEPPVCRLMDFGRFLFDQKKKKNEAKKKQKQVQIKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE H++LG ELL I+ E S ++ +P Sbjct: 102 DEGDYQVKLRNLTRFLNEGDKAKVTMRFRGREHAHRELGLELLRRIESDLAEFSIVEQQP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+L K Sbjct: 162 LMEGRQMVMVLGPK 175 >gi|289704523|ref|ZP_06500958.1| translation initiation factor IF-3 [Micrococcus luteus SK58] gi|289558781|gb|EFD52037.1| translation initiation factor IF-3 [Micrococcus luteus SK58] Length = 408 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCK++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 112 LRLAAEADLDLVEVAPTAKPPVCKLMDFGKYKYEAAVKARESRKNQVNTVLKEVRFRLKI 171 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE +LG +LL E E+ ++ +P Sbjct: 172 DKHDYETKTGHAKKFLSQGDKVKAIIQFRGREQQRPELGIKLLQQFAEDVAELGTVESQP 231 Query: 121 KFEGRQMIMILS 132 + +GR M+M+++ Sbjct: 232 RQDGRNMVMVVA 243 >gi|323499330|ref|ZP_08104307.1| translation initiation factor 3 [Vibrio sinaloensis DSM 21326] gi|323315718|gb|EGA68752.1| translation initiation factor 3 [Vibrio sinaloensis DSM 21326] Length = 129 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 62/127 (48%), Positives = 87/127 (68%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|269966329|ref|ZP_06180416.1| initiation factor IF3 [Vibrio alginolyticus 40B] gi|269829068|gb|EEZ83315.1| initiation factor IF3 [Vibrio alginolyticus 40B] Length = 129 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/127 (48%), Positives = 87/127 (68%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|315444462|ref|YP_004077341.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. Spyr1] gi|315262765|gb|ADT99506.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. Spyr1] Length = 203 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 95 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADYGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|183598815|ref|ZP_02960308.1| hypothetical protein PROSTU_02248 [Providencia stuartii ATCC 25827] gi|188021024|gb|EDU59064.1| hypothetical protein PROSTU_02248 [Providencia stuartii ATCC 25827] Length = 143 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D Sbjct: 10 AEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P + Sbjct: 70 DYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIKADLDELASVESFPSRI 129 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L+ K Sbjct: 130 EGRQMIMVLAPK 141 >gi|25028065|ref|NP_738119.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] gi|23493349|dbj|BAC18319.1| putative translation initiation factor IF-3 [Corynebacterium efficiens YS-314] Length = 225 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 77/131 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 88 KLAFDADLDLVEVAPTAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 147 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ K Sbjct: 148 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVAEYGVVETRAK 207 Query: 122 FEGRQMIMILS 132 +GR M M++ Sbjct: 208 QDGRNMTMVIG 218 >gi|256028150|ref|ZP_05441984.1| protein translation initiation factor 3 [Fusobacterium sp. D11] gi|289766086|ref|ZP_06525464.1| translation initiation factor IF-3 [Fusobacterium sp. D11] gi|289717641|gb|EFD81653.1| translation initiation factor IF-3 [Fusobacterium sp. D11] Length = 141 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 7 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ + E Sbjct: 67 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEV--EK 124 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 125 KYADKQKHLILSPKKI 140 >gi|261344016|ref|ZP_05971661.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] gi|282568409|gb|EFB73944.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] Length = 144 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D Sbjct: 10 AEEAGVDLVEISPNAEPPVCRIMDYGKHLYEKSKSQKEQKKKQKIVQVKEIKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P + Sbjct: 70 DYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGMEILNRIKADLEELAVVESFPSRI 129 Query: 123 EGRQMIMILSSK 134 EGRQMIMI++ K Sbjct: 130 EGRQMIMIMAPK 141 >gi|145298934|ref|YP_001141775.1| translation initiation factor IF-3 [Aeromonas salmonicida subsp. salmonicida A449] gi|142851706|gb|ABO90027.1| translation initiation factor IF-3 [Aeromonas salmonicida subsp. salmonicida A449] Length = 182 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 46 LNLALEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQDLG ++L +K E++ ++ P Sbjct: 106 DEGDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQDLGIKVLERVKNDLEELAVVESFP 165 Query: 121 KFEGRQMIMILSSK 134 K EGRQ +M+L+ K Sbjct: 166 KVEGRQAVMVLAPK 179 >gi|15834841|ref|NP_296600.1| translation initiation factor IF-3 [Chlamydia muridarum Nigg] gi|270285006|ref|ZP_06194400.1| translation initiation factor IF-3 [Chlamydia muridarum Nigg] gi|270289029|ref|ZP_06195331.1| translation initiation factor IF-3 [Chlamydia muridarum Weiss] gi|301336404|ref|ZP_07224606.1| translation initiation factor IF-3 [Chlamydia muridarum MopnTet14] gi|14194839|sp|Q9PL86|IF3_CHLMU RecName: Full=Translation initiation factor IF-3 gi|7190260|gb|AAF39093.1| translation initiation factor 3 [Chlamydia muridarum Nigg] Length = 186 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 35 LDLAREADLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K F+ G KVK+S FRGRE+ + + G +++ + + ++ ++ EP Sbjct: 95 DDNDFLTKVKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVVQRMCQGLEDVGFVESEP 154 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 155 KLNGRSLICVIA 166 >gi|167749029|ref|ZP_02421156.1| hypothetical protein ANACAC_03810 [Anaerostipes caccae DSM 14662] gi|317472572|ref|ZP_07931891.1| translation initiation factor IF-3 [Anaerostipes sp. 3_2_56FAA] gi|167651651|gb|EDR95780.1| hypothetical protein ANACAC_03810 [Anaerostipes caccae DSM 14662] gi|316899981|gb|EFV21976.1| translation initiation factor IF-3 [Anaerostipes sp. 3_2_56FAA] Length = 164 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 82/131 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLV+I P VCKI++ K +Y + + EA+KKQK+ +KEV+M P ID + Sbjct: 33 ADEAELDLVKISPKAKPPVCKIINYGKYKYELARKEKEAKKKQKTVEVKEVRMSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ FL G +VK++++FRGRE+ H + + +L + +++ +D PKFE Sbjct: 93 DLNTKISHARKFLSKGARVKVTLRFRGRELAHVNSSKGILDEFAKALDDVATVDKRPKFE 152 Query: 124 GRQMIMILSSK 134 GR MIM L+ K Sbjct: 153 GRSMIMFLAPK 163 >gi|328949634|ref|YP_004366969.1| Translation initiation factor IF-3 [Marinithermus hydrothermalis DSM 14884] gi|328449958|gb|AEB10859.1| Translation initiation factor IF-3 [Marinithermus hydrothermalis DSM 14884] Length = 178 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLV + + +P V ++LD K RY Q+ EARKK K +K +K R I Sbjct: 40 LAIARERDLDLVLVGPNASPPVARLLDYGKWRYEQQQALKEARKKAKRQEMKAIKFRVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL + FL+ G KVK+++ FRGRE+ H +LG+ +L + E +++ ++ +P Sbjct: 100 NEHDYQTKLGHVRRFLQQGHKVKVTIMFRGREMAHPELGKRILDRVAEDLKDLATVEMKP 159 Query: 121 KFEGRQMIMILSS 133 GR M M+L+ Sbjct: 160 VLAGRDMNMVLAP 172 >gi|312877042|ref|ZP_07737015.1| translation initiation factor IF-3 [Caldicellulosiruptor lactoaceticus 6A] gi|311796183|gb|EFR12539.1| translation initiation factor IF-3 [Caldicellulosiruptor lactoaceticus 6A] Length = 166 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + I++ K Sbjct: 151 KLDGKNLTAIIAPK 164 >gi|297588370|ref|ZP_06947013.1| translation initiation factor IF3 [Finegoldia magna ATCC 53516] gi|297573743|gb|EFH92464.1| translation initiation factor IF3 [Finegoldia magna ATCC 53516] Length = 168 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 30 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 90 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 149 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 150 SMEGRMMIMFMGP 162 >gi|116491274|ref|YP_810818.1| translation initiation factor 3 [Oenococcus oeni PSU-1] gi|116091999|gb|ABJ57153.1| bacterial translation initiation factor 3 (bIF-3) [Oenococcus oeni PSU-1] Length = 214 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 84/132 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A + NLDL+ + + P V +I+D K+++ QK E +KKQ KEV++ PVI Sbjct: 58 IADQRNLDLIIVQAKAQPPVARIMDWGKVKFEQQKKIRENKKKQIIVQTKEVRLSPVIGE 117 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 118 GDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQL 177 Query: 123 EGRQMIMILSSK 134 GRQM ++LS K Sbjct: 178 LGRQMSLLLSPK 189 >gi|167968405|ref|ZP_02550682.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] gi|215404057|ref|ZP_03416238.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|215411287|ref|ZP_03420095.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 94_M4241A] gi|215426960|ref|ZP_03424879.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T92] gi|215430533|ref|ZP_03428452.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|215445822|ref|ZP_03432574.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] gi|218753347|ref|ZP_03532143.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|254231842|ref|ZP_04925169.1| initiation factor IF-3 infC [Mycobacterium tuberculosis C] gi|254550647|ref|ZP_05141094.1| translation initiation factor IF-3 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186589|ref|ZP_05764063.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CPHL_A] gi|260200704|ref|ZP_05768195.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|260204910|ref|ZP_05772401.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|297634194|ref|ZP_06951974.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN 4207] gi|297731181|ref|ZP_06960299.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN R506] gi|313658513|ref|ZP_07815393.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN V2475] gi|124600901|gb|EAY59911.1| initiation factor IF-3 infC [Mycobacterium tuberculosis C] Length = 173 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 67 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 126 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLA 138 >gi|302380600|ref|ZP_07269065.1| translation initiation factor IF-3 [Finegoldia magna ACS-171-V-Col3] gi|303233987|ref|ZP_07320636.1| translation initiation factor IF-3 [Finegoldia magna BVS033A4] gi|302311543|gb|EFK93559.1| translation initiation factor IF-3 [Finegoldia magna ACS-171-V-Col3] gi|302494912|gb|EFL54669.1| translation initiation factor IF-3 [Finegoldia magna BVS033A4] Length = 168 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 30 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 90 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 149 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 150 SMEGRMMIMFMGP 162 >gi|299821796|ref|ZP_07053684.1| translation initiation factor IF3 [Listeria grayi DSM 20601] gi|299817461|gb|EFI84697.1| translation initiation factor IF3 [Listeria grayi DSM 20601] Length = 196 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 60 LGIAEKANLDLVLVAPNAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L ++S ++ + Sbjct: 120 DEHDFNTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFATECTDLSTVEQKA 179 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 180 KMDGRSMFLVLA 191 >gi|239917950|ref|YP_002957508.1| bacterial translation initiation factor 3 (bIF-3) [Micrococcus luteus NCTC 2665] gi|239839157|gb|ACS30954.1| bacterial translation initiation factor 3 (bIF-3) [Micrococcus luteus NCTC 2665] Length = 401 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 79/131 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCK++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 83 LRLAAEADLDLVEVAPTAKPPVCKLMDFGKYKYEAAVKARESRKNQVNTVLKEVRFRLKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE +LG +LL E E+ ++ +P Sbjct: 143 DKHDYETKTGHAKKFLSQGDKVKAIIQFRGREQQRPELGIKLLQQFAEDVAELGAVESQP 202 Query: 121 KFEGRQMIMIL 131 + +GR M+M++ Sbjct: 203 RQDGRNMVMVV 213 >gi|256832335|ref|YP_003161062.1| translation initiation factor IF-3 [Jonesia denitrificans DSM 20603] gi|256685866|gb|ACV08759.1| translation initiation factor IF-3 [Jonesia denitrificans DSM 20603] Length = 233 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA+LDLVE+ P VCK++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 52 LNLAQEADLDLVEVAPDSRPPVCKLMDYGKFKYESAMKAREARRNQANTVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 112 DDHDYGTKKGHVERFLSAGDKVKVMIMFRGREQSRPEMGIRLLQRLADDVAELGYVESSP 171 Query: 121 KFEGRQMIMILS 132 K +GR MIM+L Sbjct: 172 KQDGRNMIMVLG 183 >gi|212711438|ref|ZP_03319566.1| hypothetical protein PROVALCAL_02511 [Providencia alcalifaciens DSM 30120] gi|212685894|gb|EEB45422.1| hypothetical protein PROVALCAL_02511 [Providencia alcalifaciens DSM 30120] Length = 144 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D Sbjct: 10 AEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ IK E++ ++ P + Sbjct: 70 DYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEMLNRIKADLEELAIVESFPSRI 129 Query: 123 EGRQMIMILSSK 134 EGRQMIM++S K Sbjct: 130 EGRQMIMVMSPK 141 >gi|162452762|ref|YP_001615129.1| translation initiation factor IF-3 [Sorangium cellulosum 'So ce 56'] gi|189028357|sp|A9F8E5|IF3_SORC5 RecName: Full=Translation initiation factor IF-3 gi|161163344|emb|CAN94649.1| translation initiation factor IF-3 [Sorangium cellulosum 'So ce 56'] Length = 241 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 81/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE LDLVE++ P VCKILD K +Y +K A EA++KQ IKE+K+RP D H Sbjct: 50 AQEKGLDLVEVNPKADPPVCKILDFGKYKYDEKKKAREAKRKQSVVEIKEIKLRPKTDDH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K +A FL G KVK +V+FRGREI H + +E L I + EI+ ++ P E Sbjct: 110 DLEFKTRAAHRFLGAGHKVKFTVRFRGREITHPEKAQEQLDWIVQHCEEIANVEVRPMME 169 Query: 124 GRQMIMILSSK 134 R M ++++ K Sbjct: 170 QRTMTLMMAPK 180 >gi|307564490|ref|ZP_07627031.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A] gi|307346850|gb|EFN92146.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A] Length = 227 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LELAQEEGVDLVEISPNAQPPVCRIIDYAKFLYQQKKHQKEMKQKQVKQDIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL++G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYLFKLKHAQGFLKEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLTPK 171 >gi|189424929|ref|YP_001952106.1| translation initiation factor IF-3 [Geobacter lovleyi SZ] gi|189421188|gb|ACD95586.1| translation initiation factor IF-3 [Geobacter lovleyi SZ] Length = 157 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + TP VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 20 LEAAEARQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQEAKKKQVQVQVKEVKIRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K + FL +G K K+++ FRGREI HQD+GR ++ +I+ I+ P Sbjct: 80 DDHDLDFKVKHVRRFLEEGNKAKVTLVFRGREITHQDIGRAVIEKFASELADIAVIEVSP 139 Query: 121 KFEGRQMIMILSSKC 135 + +GRQM MI++ K Sbjct: 140 RVDGRQMFMIVAPKV 154 >gi|152967113|ref|YP_001362897.1| translation initiation factor IF-3 [Kineococcus radiotolerans SRS30216] gi|151361630|gb|ABS04633.1| translation initiation factor IF-3 [Kineococcus radiotolerans SRS30216] Length = 277 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVE+ + P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 82 LRLADEAGLDLVEVAPTARPPVCKLMDFGKFKYESDMKAREARKNQSNTILKEIRFRLKI 141 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + E ++ ++ P Sbjct: 142 DPHDYATKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGFRLLQRLAEDVSDLGGVESSP 201 Query: 121 KFEGRQMIMILS 132 + +GR M+M++ Sbjct: 202 RQDGRNMVMVIG 213 >gi|15841097|ref|NP_336134.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CDC1551] gi|219557560|ref|ZP_03536636.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T17] gi|253799319|ref|YP_003032320.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 1435] gi|254364490|ref|ZP_04980536.1| initiation factor IF-3 infC [Mycobacterium tuberculosis str. Haarlem] gi|289745921|ref|ZP_06505299.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|289761792|ref|ZP_06521170.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|294996591|ref|ZP_06802282.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 210] gi|308231896|ref|ZP_07414165.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu001] gi|308369492|ref|ZP_07417978.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu002] gi|308370782|ref|ZP_07422694.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu003] gi|308372018|ref|ZP_07427063.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu004] gi|308373202|ref|ZP_07431379.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu005] gi|308374364|ref|ZP_07435760.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu006] gi|308375635|ref|ZP_07444587.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu007] gi|308376779|ref|ZP_07440005.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu008] gi|308377786|ref|ZP_07480397.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu009] gi|308378998|ref|ZP_07484595.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu010] gi|308380137|ref|ZP_07488820.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu011] gi|308401002|ref|ZP_07493335.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu012] gi|13881312|gb|AAK45948.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CDC1551] gi|134150004|gb|EBA42049.1| initiation factor IF-3 infC [Mycobacterium tuberculosis str. Haarlem] gi|253320822|gb|ACT25425.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 1435] gi|289686449|gb|EFD53937.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|289709298|gb|EFD73314.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|308215743|gb|EFO75142.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu001] gi|308327410|gb|EFP16261.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu002] gi|308330920|gb|EFP19771.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu003] gi|308334690|gb|EFP23541.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu004] gi|308338532|gb|EFP27383.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu005] gi|308342202|gb|EFP31053.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu006] gi|308345728|gb|EFP34579.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu007] gi|308350028|gb|EFP38879.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu008] gi|308354665|gb|EFP43516.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu009] gi|308358621|gb|EFP47472.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu010] gi|308362547|gb|EFP51398.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu011] gi|308366167|gb|EFP55018.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu012] gi|328459070|gb|AEB04493.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 4207] Length = 184 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 78 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 137 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLA 149 >gi|312127733|ref|YP_003992607.1| translation initiation factor if-3 [Caldicellulosiruptor hydrothermalis 108] gi|311777752|gb|ADQ07238.1| translation initiation factor IF-3 [Caldicellulosiruptor hydrothermalis 108] Length = 166 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKIKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] gi|219871991|ref|YP_002476366.1| translation initiation factor IF-3 [Haemophilus parasuis SH0165] gi|167852279|gb|EDS23591.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] gi|219692195|gb|ACL33418.1| translation initiation factor IF-3 [Haemophilus parasuis SH0165] Length = 159 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D Sbjct: 26 ADEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL DG K KI+V+FRGRE+ HQ++G ++L +K EI+ ++ P K Sbjct: 86 DYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQEIGMDVLERVKNDLAEIAVVESAPGKL 145 Query: 123 EGRQMIMILSSK 134 EGRQ++M+L+ K Sbjct: 146 EGRQVVMVLAPK 157 >gi|168061315|ref|XP_001782635.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665868|gb|EDQ52538.1| predicted protein [Physcomitrella patens subsp. patens] Length = 315 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 2/131 (1%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRPVID 61 A++A+LDLV I P VC+I+D K RY QK EA+KK ++ +KE+KMR ID Sbjct: 138 ARDADLDLVMIAPDADPPVCRIMDYSKYRYEAQKKKREAQKKAIASRQDLKELKMRYNID 197 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD QV+L++ FL+DG KVK+ +F+GRE+ +DL +L + GE+ ++ + Sbjct: 198 THDYQVRLRSAMKFLKDGDKVKVVCQFKGREMDFKDLAFKLFQKFIDDIGELGVVESKMA 257 Query: 122 FEGRQMIMILS 132 EGRQMIM+L Sbjct: 258 IEGRQMIMLLG 268 >gi|289443095|ref|ZP_06432839.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|289447251|ref|ZP_06436995.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CPHL_A] gi|289554584|ref|ZP_06443794.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 605] gi|289569688|ref|ZP_06449915.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T17] gi|289574310|ref|ZP_06454537.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|289750189|ref|ZP_06509567.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T92] gi|289753729|ref|ZP_06513107.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|289757745|ref|ZP_06517123.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] gi|289416014|gb|EFD13254.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|289420209|gb|EFD17410.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CPHL_A] gi|289439216|gb|EFD21709.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 605] gi|289538741|gb|EFD43319.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|289543442|gb|EFD47090.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T17] gi|289690776|gb|EFD58205.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T92] gi|289694316|gb|EFD61745.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|289713309|gb|EFD77321.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] Length = 214 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 48 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 108 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 167 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 168 KQDGRNMTMVLAP 180 >gi|118602648|ref|YP_903863.1| translation initiation factor 3 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567587|gb|ABL02392.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 155 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A +A LDLVE+ + P VCKI+D K Y +++ EA+KKQK +K +K RP + Sbjct: 19 QKATQAELDLVEVSPNAQPPVCKIMDFGKFLYELKQQKKEAKKKQKRNTVKTIKYRPGTE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D Q+K K + FL +G KVK+S+ FRGREI H++LG E+L I++ E + ++ + K Sbjct: 79 ESDYQIKFKNLVKFLDNGDKVKVSIWFRGREIQHKELGMEMLDRIEKDTEEFANVEQKAK 138 Query: 122 FEGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 139 LEGRQLGMMLAPKS 152 >gi|15608779|ref|NP_216157.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Rv] gi|31792828|ref|NP_855321.1| translation initiation factor IF-3 [Mycobacterium bovis AF2122/97] gi|148822849|ref|YP_001287603.1| translation initiation factor IF-3 [Mycobacterium tuberculosis F11] gi|298525139|ref|ZP_07012548.1| initiation factor IF-3 infC [Mycobacterium tuberculosis 94_M4241A] gi|54037380|sp|P65136|IF3_MYCBO RecName: Full=Translation initiation factor IF-3 gi|54041110|sp|P65135|IF3_MYCTU RecName: Full=Translation initiation factor IF-3 gi|3261719|emb|CAB06651.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium tuberculosis H37Rv] gi|31618418|emb|CAD96336.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium bovis AF2122/97] gi|148721376|gb|ABR06001.1| initiation factor IF-3 infC [Mycobacterium tuberculosis F11] gi|298494933|gb|EFI30227.1| initiation factor IF-3 infC [Mycobacterium tuberculosis 94_M4241A] gi|323719902|gb|EGB29015.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CDC1551A] gi|326903256|gb|EGE50189.1| initiation factor IF-3 infC [Mycobacterium tuberculosis W-148] Length = 201 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 95 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 154 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLA 166 >gi|145295514|ref|YP_001138335.1| translation initiation factor IF-3 [Corynebacterium glutamicum R] gi|166198956|sp|A4QDY1|IF3_CORGB RecName: Full=Translation initiation factor IF-3 gi|140845434|dbj|BAF54433.1| hypothetical protein [Corynebacterium glutamicum R] Length = 189 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 52 KLAFDADLDLVEVAPNAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 111 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + ++ K Sbjct: 112 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVADFGIVETRAK 171 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 172 QDGRNMTMVLGP 183 >gi|326336127|ref|ZP_08202299.1| translation initiation factor IF3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691636|gb|EGD33603.1| translation initiation factor IF3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 155 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D +K Y +K A E + K IKE++ P Sbjct: 19 LRLAEEMELDLVEISPNAQPPVCKIVDYKKFLYEQKKRAKELKAKATKVEIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G+ELL + E +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGAKVKAYVFFKGRSIVYKDQGQELLLRLAVDLEEFGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 139 KLEGKRMTMFIAP 151 >gi|148661437|ref|YP_001282960.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] gi|148505589|gb|ABQ73398.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] Length = 222 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 56 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 116 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 175 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 176 KQDGRNMTMVLAP 188 >gi|16329482|ref|NP_440210.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803] gi|2497285|sp|P72874|IF3_SYNY3 RecName: Full=Translation initiation factor IF-3 gi|1651964|dbj|BAA16890.1| initiation factor IF-3 [Synechocystis sp. PCC 6803] Length = 177 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/136 (45%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 MEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +ELL + + I P Sbjct: 102 DEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELLDRMATDLATEADIQQAP 161 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M LS K V Sbjct: 162 KREGRNMMMFLSPKKV 177 >gi|169824392|ref|YP_001692003.1| translation initiation factor IF-3 [Finegoldia magna ATCC 29328] gi|167831197|dbj|BAG08113.1| translation initiation factor IF-3 [Finegoldia magna ATCC 29328] Length = 192 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 54 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 114 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 173 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 174 SMEGRMMIMFMGP 186 >gi|291457666|ref|ZP_06597056.1| translation initiation factor IF-3 [Bifidobacterium breve DSM 20213] gi|291380719|gb|EFE88237.1| translation initiation factor IF-3 [Bifidobacterium breve DSM 20213] Length = 266 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 65 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 125 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEFGTVESKP 184 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 185 KQEGRNIIMTLAPK 198 >gi|298530061|ref|ZP_07017463.1| translation initiation factor IF-3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509435|gb|EFI33339.1| translation initiation factor IF-3 [Desulfonatronospira thiodismutans ASO3-1] Length = 162 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MAQ + DLVE+ + P VC+I+D K +Y QK EA+KKQ +KE+K+RP Sbjct: 24 LDMAQSSGFDLVEVAPNADPPVCRIMDFGKYQYQQQKKKQEAKKKQSRVQVKEIKVRPKT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL K++ I F+ +G +VK+SV FRGRE+ H+D G ++L+ + E+ +++R++ EP Sbjct: 84 DVNDLNTKVRHIRKFIEEGDRVKVSVFFRGREMAHKDRGADILNKVVEQTSDVARVEQEP 143 Query: 121 KFEGRQMIMILSS 133 ++EGR M ++LS Sbjct: 144 RYEGRTMHLLLSP 156 >gi|268592567|ref|ZP_06126788.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] gi|291311981|gb|EFE52434.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] Length = 143 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D Sbjct: 10 AEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGTDEG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P + Sbjct: 70 DYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGLEVLNRIKTDLDELASVESFPSRI 129 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L+ K Sbjct: 130 EGRQMIMVLAPK 141 >gi|256372443|ref|YP_003110267.1| translation initiation factor IF-3 [Acidimicrobium ferrooxidans DSM 10331] gi|256009027|gb|ACU54594.1| translation initiation factor IF-3 [Acidimicrobium ferrooxidans DSM 10331] Length = 170 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ++DLVE+ P V KI+D K ++ + E ++K ++ +KE+K RP I Sbjct: 29 LQIARAMDMDLVEVAPMAKPPVAKIMDYGKFKFDQAQRVREQKRKASASQLKEMKYRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K + + FL +G KVK+++ FRGRE+ H +LG+E+L+ + E ++ ++ P Sbjct: 89 SQGDFDTKTRQVAKFLAEGHKVKVTIMFRGREVFHPELGQEILTRVVEAVKGVAHVEVMP 148 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L+ Sbjct: 149 KLDGRNMVMVLAP 161 >gi|121637549|ref|YP_977772.1| translation initiation factor IF-3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990024|ref|YP_002644711.1| putative initiation factor IF-3 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493196|emb|CAL71667.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773137|dbj|BAH25943.1| putative initiation factor IF-3 [Mycobacterium bovis BCG str. Tokyo 172] Length = 201 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 95 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 154 Query: 121 KFEGRQMIMILS 132 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLA 166 >gi|312793383|ref|YP_004026306.1| translation initiation factor if-3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180523|gb|ADQ40693.1| translation initiation factor IF-3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 166 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|110802686|ref|YP_699172.1| translation initiation factor IF-3 [Clostridium perfringens SM101] gi|110683187|gb|ABG86557.1| translation initiation factor IF-3 [Clostridium perfringens SM101] Length = 173 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L N + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDNFLNQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPK 171 >gi|228472821|ref|ZP_04057579.1| translation initiation factor IF-3 [Capnocytophaga gingivalis ATCC 33624] gi|228275872|gb|EEK14638.1| translation initiation factor IF-3 [Capnocytophaga gingivalis ATCC 33624] Length = 155 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D +K Y +K A E + K IKE++ P Sbjct: 19 LRLAEEMELDLVEISPNAQPPVCKIVDYKKFLYEQKKRAKELKAKATKVEIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G+ELL + E +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGAKVKAYVFFKGRSIVYKDQGQELLLRLAVDLEEYGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 139 KLEGKRMTMFIAP 151 >gi|298373536|ref|ZP_06983525.1| translation initiation factor IF-3 [Bacteroidetes oral taxon 274 str. F0058] gi|298274588|gb|EFI16140.1| translation initiation factor IF-3 [Bacteroidetes oral taxon 274 str. F0058] Length = 153 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI + P VCKI+D +K Y ++K E + +KE++ P Sbjct: 17 LSRADDLGLDLVEISPNADPPVCKIVDYQKFLYQLKKKEKEVKANTVKVVVKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK F+ DG KVK SV FRGR IM ++ G ELL + +I++ D P Sbjct: 77 DEHDYNFKLKHARSFIEDGNKVKASVFFRGRSIMFKEQGEELLKRFVDDLEDIAKPDNTP 136 Query: 121 KFEGRQMIMILSSK 134 K EG++MI+ +S K Sbjct: 137 KLEGKRMILNISPK 150 >gi|23335405|ref|ZP_00120641.1| COG0290: Translation initiation factor 3 (IF-3) [Bifidobacterium longum DJO10A] gi|23465927|ref|NP_696530.1| translation initiation factor IF-3 [Bifidobacterium longum NCC2705] gi|189439095|ref|YP_001954176.1| translation initiation factor 3 [Bifidobacterium longum DJO10A] gi|213691794|ref|YP_002322380.1| initiation factor 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227547604|ref|ZP_03977653.1| translation initiation factor 3 (IF-3) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312132532|ref|YP_003999871.1| infc [Bifidobacterium longum subsp. longum BBMN68] gi|317482511|ref|ZP_07941527.1| translation initiation factor IF-3 domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322689459|ref|YP_004209193.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis 157F] gi|322691427|ref|YP_004220997.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. longum JCM 1217] gi|23326636|gb|AAN25166.1| translation initiation factor If-3 [Bifidobacterium longum NCC2705] gi|189427530|gb|ACD97678.1| Translation initiation factor 3 [Bifidobacterium longum DJO10A] gi|213523255|gb|ACJ52002.1| initiation factor 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227211859|gb|EEI79755.1| translation initiation factor 3 (IF-3) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311773466|gb|ADQ02954.1| InfC [Bifidobacterium longum subsp. longum BBMN68] gi|316916063|gb|EFV37469.1| translation initiation factor IF-3 domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320456283|dbj|BAJ66905.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. longum JCM 1217] gi|320457888|dbj|BAJ68509.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320460795|dbj|BAJ71415.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis 157F] Length = 211 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 10 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 70 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKP 129 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 130 KQEGRNIIMTLAPK 143 >gi|260494365|ref|ZP_05814496.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_33] gi|260198511|gb|EEW96027.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_33] Length = 180 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ + E Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEV--EK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPK 177 >gi|238922263|ref|YP_002935777.1| translation initiation factor IF-3 [Eubacterium eligens ATCC 27750] gi|238873935|gb|ACR73643.1| translation initiation factor IF-3 [Eubacterium eligens ATCC 27750] Length = 164 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A +DLV + S P VC+I+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 LNMAKDAGVDLVMVSPSANPPVCRIVDYGKFKYEQLRKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL K + F+ G KVK+S++FRGRE+ H D + +L + E+ +I+ I+ P Sbjct: 90 DVNDLNTKCNSARKFIEKGNKVKVSLRFRGREMAHIDSTKHILEDFAEKLSDIAVIEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 150 KMEGRSMMMFLTEK 163 >gi|120554977|ref|YP_959328.1| initiation factor 3 [Marinobacter aquaeolei VT8] gi|120324826|gb|ABM19141.1| bacterial translation initiation factor 3 (bIF-3) [Marinobacter aquaeolei VT8] Length = 134 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLV++ S P VCKI+D K + +K A+KKQK T +KE+K RP + Sbjct: 1 MAEEATLDLVQVTDS-DPIVCKIMDYGKKIFEEKKAKAAAKKKQKQTQVKELKFRPGTEE 59 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL +G + KI+++FRGRE+ HQ++G +L+ I+E EI++++ PK Sbjct: 60 GDYQVKLRNLVRFLENGDRGKITIRFRGREMAHQEIGMKLMQRIEEDVAEIAQVEMRPKM 119 Query: 123 EGRQMIMILSSK 134 EGRQM M+++ + Sbjct: 120 EGRQMTMVIAPR 131 >gi|165975679|ref|YP_001651272.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149494|ref|YP_001968019.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251655|ref|ZP_07337828.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245035|ref|ZP_07527130.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251753|ref|ZP_07533656.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253989|ref|ZP_07535838.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256249|ref|ZP_07538034.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258444|ref|ZP_07540183.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260681|ref|ZP_07542371.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262813|ref|ZP_07544438.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165875780|gb|ABY68828.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914625|gb|ACE60877.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649497|gb|EFL79680.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854059|gb|EFM86269.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860754|gb|EFM92764.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863052|gb|EFM94997.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865248|gb|EFM97146.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867486|gb|EFM99335.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869602|gb|EFN01389.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871828|gb|EFN03547.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 159 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D Sbjct: 26 AEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P K Sbjct: 86 DYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAPGKL 145 Query: 123 EGRQMIMILSSK 134 EGRQ +M+++ K Sbjct: 146 EGRQAVMVIAPK 157 >gi|304310699|ref|YP_003810297.1| Translation initiation factor IF-3 [gamma proteobacterium HdN1] gi|301796432|emb|CBL44640.1| Translation initiation factor IF-3 [gamma proteobacterium HdN1] Length = 183 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA LDLVEI + P VC+++D K + +K EA+KKQK +KE+K RPV Sbjct: 47 LDAAYEAELDLVEIAADAVPPVCRVMDYGKHIFEEKKQKNEAKKKQKQIQVKEIKFRPVT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ+L LL ++ E ++ +P Sbjct: 107 DEGDYQVKLRNLKRFLSDGDKAKITMRFRGREVTHQELAITLLRRVEADLEEFGAVEQQP 166 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M++ K Sbjct: 167 EMEGRQMVMVMGPK 180 >gi|282599728|ref|ZP_05971660.2| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] gi|282568407|gb|EFB73942.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] Length = 184 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 48 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 108 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGLEVLNRIKADLEELAVVESFP 167 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+LS K Sbjct: 168 SRIEGRQMIMVLSPK 182 >gi|262394486|ref|YP_003286340.1| translation initiation factor 3 [Vibrio sp. Ex25] gi|262338080|gb|ACY51875.1| translation initiation factor 3 [Vibrio sp. Ex25] Length = 129 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/127 (47%), Positives = 87/127 (68%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E++ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAELAVVESFPKKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|269795538|ref|YP_003314993.1| translation initiation factor 3 [Sanguibacter keddieii DSM 10542] gi|269097723|gb|ACZ22159.1| bacterial translation initiation factor 3 (bIF-3) [Sanguibacter keddieii DSM 10542] Length = 329 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+A+LDLVE+ P VCK++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 52 LSLAQDADLDLVEVAPDARPPVCKLMDYGKFKYESDMKAREARRNQANTVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + E E+ I+ P Sbjct: 112 DPHDYGTKKGHVERFLSAGDKVKVMIMFRGREQSRPEMGVRLLQRLAEDVQELGFIESMP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 172 KQDGRNMIMVLGP 184 >gi|239621209|ref|ZP_04664240.1| LOW QUALITY PROTEIN: translation initiation factor If-3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515670|gb|EEQ55537.1| LOW QUALITY PROTEIN: translation initiation factor If-3 [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 241 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 40 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 100 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 160 KQEGRNIIMTLAPK 173 >gi|303239878|ref|ZP_07326401.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] gi|302592588|gb|EFL62313.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] Length = 165 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 80/131 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV++ + P VCKI+D K + K EARK QK +KEV++ I+ Sbjct: 30 KIAITKNLDLVKVVPNAAPPVCKIMDYGKSMFEQAKKEKEARKNQKVVSLKEVRLSATIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+K FL+DG KVK+S++FRGRE+ + G+E+L E + ++ +PK Sbjct: 90 EHDFDFKVKNACKFLQDGDKVKVSIRFRGREMKYTVTGKEVLEKFAEAVNGVGIVEKQPK 149 Query: 122 FEGRQMIMILS 132 EG+ M+MIL+ Sbjct: 150 LEGKSMMMILN 160 >gi|188025948|ref|ZP_02960309.2| hypothetical protein PROSTU_02249 [Providencia stuartii ATCC 25827] gi|188021025|gb|EDU59065.1| hypothetical protein PROSTU_02249 [Providencia stuartii ATCC 25827] Length = 159 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 23 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G ++L+ IK E++ ++ P Sbjct: 83 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMDVLNRIKSDLDELASVESFP 142 Query: 121 -KFEGRQMIMILSSK 134 K EGRQMIM+L+ K Sbjct: 143 SKIEGRQMIMVLAPK 157 >gi|302871994|ref|YP_003840630.1| translation initiation factor IF-3 [Caldicellulosiruptor obsidiansis OB47] gi|302574853|gb|ADL42644.1| translation initiation factor IF-3 [Caldicellulosiruptor obsidiansis OB47] Length = 166 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGIVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|254302740|ref|ZP_04970098.1| initiation factor IF3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322932|gb|EDK88182.1| initiation factor IF3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 182 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 48 LNLATSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ + E Sbjct: 108 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEV--EK 165 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 166 KYADKQKHLILSPK 179 >gi|302339088|ref|YP_003804294.1| translation initiation factor IF-3 [Spirochaeta smaragdinae DSM 11293] gi|301636273|gb|ADK81700.1| translation initiation factor IF-3 [Spirochaeta smaragdinae DSM 11293] Length = 176 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++AN DLVE+ + P VCKILD K ++ +K E++KKQK +KE++M+P I Sbjct: 36 LELARQANADLVEVSPNADPPVCKILDYGKYKFDQEKRRKESKKKQKQIKLKEIRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS---RID 117 + HDL+ K K I FL +G KVK++++FRGRE+ H +LGR++L + E E+ +D Sbjct: 96 ETHDLEFKTKHIKTFLEEGNKVKVTIRFRGRELAHTELGRDVLMKVNEILEELETDFSMD 155 Query: 118 CEPKFEGRQMIMILSSKC 135 +P EGR M MILS K Sbjct: 156 RKPIMEGRFMSMILSPKT 173 >gi|194246830|ref|YP_002004469.1| Translation initiation factor IF3 [Candidatus Phytoplasma mali] gi|193807187|emb|CAP18628.1| Translation initiation factor IF3 [Candidatus Phytoplasma mali] Length = 185 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 81/131 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +D++ ++SS P + ++ D K RY QK E +KKQK+ +KE+++ P I Sbjct: 45 LRIAEEKEIDILLVNSSSVPMIARLTDYSKYRYNQQKKNREMKKKQKNINVKEIRIGPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 L+D +K+K I FL KVKI ++FRGR I+H LG E+L I IS + EP Sbjct: 105 GLNDFNIKVKNIQKFLSQDDKVKIIMRFRGRMIIHHKLGLEVLKKIITELRHISYTEMEP 164 Query: 121 KFEGRQMIMIL 131 K G Q+I+IL Sbjct: 165 KLVGNQIIIIL 175 >gi|189501973|ref|YP_001957690.1| translation initiation factor IF-3 [Candidatus Amoebophilus asiaticus 5a2] gi|189497414|gb|ACE05961.1| hypothetical protein Aasi_0560 [Candidatus Amoebophilus asiaticus 5a2] Length = 186 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ LDLVEI + P VCKI+D K +Y ++ E + K + T IKE+++ P Sbjct: 49 LKMAQVRELDLVEISPNAEPPVCKIIDYSKFKYEQKRKQREIKSKSQKTTIKEIRLGPNT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K FL++G KVK+ V+F GR I+ ++ G LL + E +I+ P Sbjct: 109 DEHDLNFKIKHATKFLQEGAKVKVYVQFVGRTIVFKERGELLLLKFAQALEEHGKIEHMP 168 Query: 121 KFEGRQMIMILSSK 134 K EGR+M + +S K Sbjct: 169 KLEGRKMHLSISPK 182 >gi|154509025|ref|ZP_02044667.1| hypothetical protein ACTODO_01542 [Actinomyces odontolyticus ATCC 17982] gi|293192345|ref|ZP_06609456.1| translation initiation factor IF-3 [Actinomyces odontolyticus F0309] gi|153798659|gb|EDN81079.1| hypothetical protein ACTODO_01542 [Actinomyces odontolyticus ATCC 17982] gi|292820260|gb|EFF79254.1| translation initiation factor IF-3 [Actinomyces odontolyticus F0309] Length = 195 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 17 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + E G+++ ++ P Sbjct: 77 DDHDFGVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLQRLAEEIGDLATVESMP 136 Query: 121 KFEGRQMIMILS 132 + +GR M M+L+ Sbjct: 137 RQDGRNMTMVLA 148 >gi|153855816|ref|ZP_01996802.1| hypothetical protein DORLON_02823 [Dorea longicatena DSM 13814] gi|149751857|gb|EDM61788.1| hypothetical protein DORLON_02823 [Dorea longicatena DSM 13814] Length = 164 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEADLDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + + G+I+ I+ Sbjct: 90 ETNDLNTKVNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAQMLGDIAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|331006135|ref|ZP_08329464.1| Translation initiation factor 3 [gamma proteobacterium IMCC1989] gi|330420059|gb|EGG94396.1| Translation initiation factor 3 [gamma proteobacterium IMCC1989] Length = 135 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 88/132 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ A LDLVEI TP VCK++D K + ++K A+KKQK +KE+K RP D Sbjct: 1 MAQAATLDLVEIVPDSTPIVCKVMDYGKHLFGLKKTKAAAKKKQKQQQVKEMKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D +VKL+ + FL +G K K+S+++RGRE+ HQ+LG E+L I+ E++ ++ PK Sbjct: 61 GDYKVKLRNLIRFLENGDKAKVSLRYRGREMAHQELGMEMLKRIETDLVELATVEQFPKM 120 Query: 123 EGRQMIMILSSK 134 EGRQ+IM+++ K Sbjct: 121 EGRQLIMVMAPK 132 >gi|117619989|ref|YP_856849.1| translation initiation factor IF-3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561396|gb|ABK38344.1| translation initiation factor IF-3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 135 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 85/132 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP D Sbjct: 1 MALEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL DG K K++++FRGRE+ HQ+LG ++L +K E++ ++ PK Sbjct: 61 GDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQELGIKVLERVKNDLEELAVVESFPKV 120 Query: 123 EGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 121 EGRQAVMVLAPK 132 >gi|327402299|ref|YP_004343137.1| translation initiation factor 3 (bIF-3) [Fluviicola taffensis DSM 16823] gi|327317807|gb|AEA42299.1| bacterial translation initiation factor 3 (bIF-3) [Fluviicola taffensis DSM 16823] Length = 181 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E ++DLVEI + P VCKI+D RK Y ++ E + KQ +KE++ P Sbjct: 46 LQLAEEQDMDLVEISPNAVPPVCKIMDYRKFLYNQKRKQKELKAKQSKVILKEIRFGPNT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL FL +G KVK V FRGR I+ +D G LL + ++ ++ P Sbjct: 106 DDHDFQFKLTHARKFLEEGSKVKAYVFFRGRTIVFKDRGEILLLKFVQELADLGTLEQMP 165 Query: 121 KFEGRQMIMILSSK 134 K EG++MI++++ K Sbjct: 166 KLEGKRMIVMINPK 179 >gi|121591401|ref|ZP_01678682.1| initiation factor IF3 [Vibrio cholerae 2740-80] gi|153217653|ref|ZP_01951334.1| initiation factor IF3 [Vibrio cholerae 1587] gi|153817547|ref|ZP_01970214.1| initiation factor IF3 [Vibrio cholerae NCTC 8457] gi|153829044|ref|ZP_01981711.1| initiation factor IF3 [Vibrio cholerae 623-39] gi|6016327|sp|O68844|IF3_VIBCH RecName: Full=Translation initiation factor IF-3 gi|5825614|gb|AAD53320.1|AF179591_2 initiation factor IF3 [Vibrio cholerae] gi|3095162|gb|AAC38421.1| initiation factor IF3 [Vibrio cholerae] gi|121546738|gb|EAX56912.1| initiation factor IF3 [Vibrio cholerae 2740-80] gi|124113403|gb|EAY32223.1| initiation factor IF3 [Vibrio cholerae 1587] gi|126511972|gb|EAZ74566.1| initiation factor IF3 [Vibrio cholerae NCTC 8457] gi|148875473|gb|EDL73608.1| initiation factor IF3 [Vibrio cholerae 623-39] Length = 183 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E+ LDLVEI + P VC+++D K + K E +KKQK IKE+K RP Sbjct: 47 LATAEESGLDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P Sbjct: 107 DVGDYQVKLRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFP 166 Query: 121 -KFEGRQMIMILSSK 134 K E RQMIM+L+ K Sbjct: 167 TKIEARQMIMVLAPK 181 >gi|15606839|ref|NP_214219.1| initiation factor IF-3 [Aquifex aeolicus VF5] gi|6016323|sp|O67653|IF3_AQUAE RecName: Full=Translation initiation factor IF-3 gi|2984082|gb|AAC07621.1| initiation factor IF-3 [Aquifex aeolicus VF5] Length = 175 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 +++A+E LDLVEI P VCKI+D K +Y ++K EARKKQ+ I K+++M+ Sbjct: 37 LKIAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREARKKQREHQIEVKDIRMKV 96 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDLQVKLK + FL +G KVK+ ++FRGRE ++ +LG++L I +I+ ++ Sbjct: 97 RIDEHDLQVKLKHMREFLEEGDKVKVWLRFRGRENIYPELGKKLAERIINELSDIAEVEV 156 Query: 119 EPKFEGRQMIMILSSK 134 +PK EG MI +L+ K Sbjct: 157 QPKKEGNFMIFVLAPK 172 >gi|255280783|ref|ZP_05345338.1| translation initiation factor IF-3 [Bryantella formatexigens DSM 14469] gi|255268720|gb|EET61925.1| translation initiation factor IF-3 [Bryantella formatexigens DSM 14469] Length = 164 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV++ P VCKI+D K RY + + EA+KKQK+ IKEV++ P I Sbjct: 30 MKLAREAELDLVKVAPMAKPPVCKIIDYGKYRYEMARKEKEAKKKQKTIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + + +I+ +D Sbjct: 90 DANDLNTKIGAARKFLSKGNKVKVTLRFRGREMAHMQSSKHILDDFAKELEDIASVDKAA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + MIL+ K Sbjct: 150 KVEGRSLTMILTEK 163 >gi|154482660|ref|ZP_02025108.1| hypothetical protein EUBVEN_00333 [Eubacterium ventriosum ATCC 27560] gi|149736436|gb|EDM52322.1| hypothetical protein EUBVEN_00333 [Eubacterium ventriosum ATCC 27560] Length = 164 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 78/133 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDL++I P VCKI+D K RY QK EA+KKQ +KE+++ P ++ Sbjct: 31 KLADEAELDLIKISPKAKPPVCKIMDYGKFRYEQQKREKEAKKKQHIVEVKEIRLSPNVE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++DL+ K F+ G KVK++++FRGRE+ H +L + + +I+ + PK Sbjct: 91 INDLKTKANNARKFIEKGDKVKVTLRFRGREMAHISSNAHVLDDFAKMLEDIASVVKAPK 150 Query: 122 FEGRQMIMILSSK 134 EGR M M L K Sbjct: 151 LEGRNMTMFLEKK 163 >gi|237744050|ref|ZP_04574531.1| translation initiation factor IF-3 [Fusobacterium sp. 7_1] gi|229431279|gb|EEO41491.1| translation initiation factor IF-3 [Fusobacterium sp. 7_1] Length = 188 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 54 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E++ + E Sbjct: 114 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEVAEV--EK 171 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 172 KYADKQKHLILSPK 185 >gi|76789578|ref|YP_328664.1| translation initiation factor IF-3 [Chlamydia trachomatis A/HAR-13] gi|237803265|ref|YP_002888459.1| translation initiation factor IF-3 [Chlamydia trachomatis B/Jali20/OT] gi|237805186|ref|YP_002889340.1| translation initiation factor IF-3 [Chlamydia trachomatis B/TZ1A828/OT] gi|76168108|gb|AAX51116.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis A/HAR-13] gi|231273486|emb|CAX10402.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis B/TZ1A828/OT] gi|231274499|emb|CAX11295.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis B/Jali20/OT] Length = 175 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 81/132 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSESPVCKIMDYGKYRYDVTKKEKDSKKAQHRVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILS 132 K GR +I +++ Sbjct: 155 KLNGRSLICVIA 166 >gi|297182829|gb|ADI18981.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0010_10I05] Length = 186 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 76/130 (58%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQ LDLVE+ P VC+++D K +Y K A+ QK +KEVK+RP I+ H Sbjct: 53 AQSDGLDLVEVSPKADPPVCRLMDYGKFKYQQSKRQHAAKVHQKVIHVKEVKLRPKIEDH 112 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DLQ K++ FL DG KVK++V F GRE+ H+DLG L+ + GE ++ + E Sbjct: 113 DLQFKVRNALRFLEDGDKVKVNVVFMGREMAHKDLGLVLIERFQNMIGENGIVEQPVRNE 172 Query: 124 GRQMIMILSS 133 GR M MIL+ Sbjct: 173 GRSMFMILAP 182 >gi|218296413|ref|ZP_03497156.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23] gi|218243207|gb|EED09738.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23] Length = 157 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + + P V +I++ K RY Q EARKK K T +K +K R I Sbjct: 20 LRLAREQDLDLVLVGPTAEPPVARIMNYSKWRYEQQVAEKEARKKAKRTEVKSIKFRVKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL +G KVK+++ FRGRE+ + +LG+ LL + + ++ ++ +P Sbjct: 80 DDHDYQTKLNHIKRFLEEGHKVKVTIMFRGREMSYPELGQRLLERVAKDLEGLAVVEMKP 139 Query: 121 KFEGRQMIMILSSKCV 136 + GR M M+L+ V Sbjct: 140 ELLGRDMNMLLAPAKV 155 >gi|328955209|ref|YP_004372542.1| bacterial translation initiation factor 3 (bIF-3) [Coriobacterium glomerans PW2] gi|328455533|gb|AEB06727.1| bacterial translation initiation factor 3 (bIF-3) [Coriobacterium glomerans PW2] Length = 214 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLVEI + P VC+++D K +Y A ARK Q +KE+K RP ID Sbjct: 67 RIADEQGLDLVEIAPNAEPPVCRVMDYGKFKYQQAMKAKAARKNQSRVEVKEMKFRPKID 126 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + + + ++ PK Sbjct: 127 VGDFETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAKDLESCAVVESAPK 186 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 187 LEGRNMLMVLAP 198 >gi|299139850|ref|ZP_07033022.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX8] gi|298598204|gb|EFI54370.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX8] Length = 183 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVEI + P VCKI D K Y K+ ARKKQK IKEVK + Sbjct: 18 LKMAREKSLDLVEISPNAVPPVCKIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL DG KVK S++F+GR++ H+DLG ++++ + GE ++ P Sbjct: 78 DEHDYQTKKNQAVRFLGDGDKVKASLRFKGRQMAHRDLGYKIINRLIMDIGEAGTVEFMP 137 Query: 121 KFEGRQMIMILS 132 + EG + IL+ Sbjct: 138 RMEGTTLHAILA 149 >gi|255080936|ref|XP_002504034.1| initiation factor [Micromonas sp. RCC299] gi|226519301|gb|ACO65292.1| initiation factor [Micromonas sp. RCC299] Length = 255 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 3/135 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 M +A+EA LDLV + P VC+I++ K +Y +K A E RKK ++ +KE+KMR Sbjct: 35 MVIAEEAGLDLVLVSPDANPPVCRIMNYSKFKYENEKKARETRKKAAASRVEVKELKMRY 94 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRID 117 ID+HD V+L+A FL G +VK+ +FRGRE +DLGR++ + G ++ +D Sbjct: 95 NIDVHDYGVRLRAAQKFLGAGDRVKVICQFRGRENEFRDLGRDMFMRFVDDVGADLCNLD 154 Query: 118 CEPKFEGRQMIMILS 132 P EG +M+M+LS Sbjct: 155 GSPSMEGNRMVMLLS 169 >gi|148982343|ref|ZP_01816720.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrionales bacterium SWAT-3] gi|145960523|gb|EDK25886.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrionales bacterium SWAT-3] Length = 156 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQD+G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKADTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 147 MIMVLAPK 154 >gi|320102028|ref|YP_004177619.1| translation initiation factor 3 (bIF-3) [Isosphaera pallida ATCC 43644] gi|319749310|gb|ADV61070.1| bacterial translation initiation factor 3 (bIF-3) [Isosphaera pallida ATCC 43644] Length = 172 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 87/135 (64%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P VCKI+D K +Y +K A ++ K +KE+++RP Sbjct: 40 LELAREAGLDLVEVSPNERPPVCKIMDYGKFKYEQKKKA--SKNKPHQAVLKEIRVRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K GFL D KV++ V+FRGRE+ H + GR++++ + + ++++I+ P Sbjct: 98 GEHDIEFKVKQARGFLADKDKVQLVVQFRGRELAHIEEGRKVMNEVLQMLEDVAKIERAP 157 Query: 121 KFEGRQMIMILSSKC 135 E R+MI I++ K Sbjct: 158 TMENRKMIAIVAPKV 172 >gi|222529195|ref|YP_002573077.1| translation initiation factor IF-3 [Caldicellulosiruptor bescii DSM 6725] gi|222456042|gb|ACM60304.1| translation initiation factor IF-3 [Caldicellulosiruptor bescii DSM 6725] Length = 171 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 36 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ + ++ +P Sbjct: 96 EEHDFNVKVKNAIRFLKDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKDYGVVEKKP 155 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 156 KLDGKNLTAVIAPK 169 >gi|269978175|ref|ZP_06185125.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1] gi|307700704|ref|ZP_07637729.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16] gi|269933684|gb|EEZ90268.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1] gi|307613699|gb|EFN92943.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16] Length = 362 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ ID Sbjct: 51 LAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKIDQ 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P+ Sbjct: 111 HDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQ 170 Query: 123 EGRQMIMILS 132 +GR M M+L+ Sbjct: 171 DGRNMTMVLA 180 >gi|261337538|ref|ZP_05965422.1| translation initiation factor IF-3 [Bifidobacterium gallicum DSM 20093] gi|270277944|gb|EFA23798.1| translation initiation factor IF-3 [Bifidobacterium gallicum DSM 20093] Length = 225 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPHAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G ELL + + E+ I+ P Sbjct: 101 DDHDFEVKKGHVERFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLADEVSEVGTIESAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|312135020|ref|YP_004002358.1| translation initiation factor if-3 [Caldicellulosiruptor owensensis OL] gi|311775071|gb|ADQ04558.1| translation initiation factor IF-3 [Caldicellulosiruptor owensensis OL] Length = 166 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 + +G+ + +++ K Sbjct: 151 RLDGKNLTAVIAPK 164 >gi|167752343|ref|ZP_02424470.1| hypothetical protein ALIPUT_00587 [Alistipes putredinis DSM 17216] gi|167660584|gb|EDS04714.1| hypothetical protein ALIPUT_00587 [Alistipes putredinis DSM 17216] Length = 154 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDL+EI P VC+I D +K Y +K A E + Q IKE++ P Sbjct: 18 LKLADEMELDLIEISPKADPPVCRIADYQKFLYQQKKKAKELKANQAKVTIKEIRFGPQT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK + FL++G KVK V FRGR I+ ++ G LL E+++++ P Sbjct: 78 DDHDYNFKLKHAENFLKEGSKVKAYVFFRGRSIVFKEQGEILLLRFATDLEELAKVESMP 137 Query: 121 KFEGRQMIMILSSKC 135 K +G++M MIL+ K Sbjct: 138 KLDGKKMNMILAPKS 152 >gi|306818550|ref|ZP_07452273.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239] gi|304648723|gb|EFM46025.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239] Length = 362 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ ID Sbjct: 51 LAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKIDQ 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P+ Sbjct: 111 HDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQ 170 Query: 123 EGRQMIMILS 132 +GR M M+L+ Sbjct: 171 DGRNMTMVLA 180 >gi|229827027|ref|ZP_04453096.1| hypothetical protein GCWU000182_02411 [Abiotrophia defectiva ATCC 49176] gi|229788645|gb|EEP24759.1| hypothetical protein GCWU000182_02411 [Abiotrophia defectiva ATCC 49176] Length = 164 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA EA LDLV+I + P VCKI+D RK RY K EA+KKQK T +KE+++ P I Sbjct: 30 MKMAIEAELDLVKIAPTAKPPVCKIIDYRKYRYEQAKREKEAKKKQKVTEVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K FL G KVK++++FRGRE+ H +++L E+ G+I+ ++ + Sbjct: 90 DDNDLNTKANQAKKFLDKGDKVKVTLRFRGREMAHISSNKQILDVFLEKLGDIASVEKQA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+++ K Sbjct: 150 KLEGRSMSMVVTGK 163 >gi|332993606|gb|AEF03661.1| translation initiation factor IF-3 [Alteromonas sp. SN2] Length = 186 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 87/132 (65%), Gaps = 1/132 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA+LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 50 KLAEEASLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTD 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP- 120 D QVKL+ + FL G K K++++FRGRE+ HQ++G ELL+ +K EI+ + P Sbjct: 110 EGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQEIGIELLNRVKADLEEIAVCESFPR 169 Query: 121 KFEGRQMIMILS 132 + EGRQMIM+L+ Sbjct: 170 RVEGRQMIMVLA 181 >gi|317131311|ref|YP_004090625.1| translation initiation factor IF-3 [Ethanoligenens harbinense YUAN-3] gi|315469290|gb|ADU25894.1| translation initiation factor IF-3 [Ethanoligenens harbinense YUAN-3] Length = 190 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV+I P VC+I+D K R+ K EA+K Q+ IKE++M I Sbjct: 40 LRLAEEKNLDLVKIAPQAKPPVCRIMDYGKFRFEQAKKEKEAKKNQRVVEIKEIRMSLNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K FLR G +VK++V+FRGRE+ H +LG+ LL +S ++ +P Sbjct: 100 DTHDLETKAGHALQFLRSGDRVKVTVRFRGREMAHTELGKTLLGRFAALCEGVSSVEKQP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR M + L +K Sbjct: 160 KLEGRSMSLFLVAK 173 >gi|227875288|ref|ZP_03993430.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243] gi|227844193|gb|EEJ54360.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243] Length = 356 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ ID Sbjct: 45 LAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKIDQ 104 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P+ Sbjct: 105 HDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQ 164 Query: 123 EGRQMIMILS 132 +GR M M+L+ Sbjct: 165 DGRNMTMVLA 174 >gi|332141017|ref|YP_004426755.1| Translation initiation factor 3 [Alteromonas macleodii str. 'Deep ecotype'] gi|327551039|gb|AEA97757.1| Translation initiation factor 3 [Alteromonas macleodii str. 'Deep ecotype'] Length = 144 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A+EA+LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 9 RTAEEASLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP- 120 D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K EI+ + P Sbjct: 69 EGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKTDLEEIATCESFPR 128 Query: 121 KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 129 RVEGRQMIMVLAP 141 >gi|238924313|ref|YP_002937829.1| translation initiation factor IF-3 [Eubacterium rectale ATCC 33656] gi|238875988|gb|ACR75695.1| translation initiation factor IF-3 [Eubacterium rectale ATCC 33656] gi|291525083|emb|CBK90670.1| bacterial translation initiation factor 3 (bIF-3) [Eubacterium rectale DSM 17629] gi|291529178|emb|CBK94764.1| bacterial translation initiation factor 3 (bIF-3) [Eubacterium rectale M104/1] Length = 164 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I + P VCK++D K RY + +A+KKQK+ +KE+++ P I+ Sbjct: 31 KIADEAGLDLVKIAPNAKPPVCKVIDYGKYRYEQARKEKDAKKKQKTVELKEIRLSPNIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G KVKI+++FRGRE+ H + + +L +I E +++ ++ PK Sbjct: 91 ANDLNTKMNAAKKFLAKGNKVKITLRFRGREMAHMNASKHILDDIAENLSDVAVVEKAPK 150 Query: 122 FEGRQMIMILSSK 134 EGR + M+L+ K Sbjct: 151 VEGRSIGMVLAEK 163 >gi|330719623|gb|EGG98193.1| Translation initiation factor 3 [gamma proteobacterium IMCC2047] Length = 129 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 76/125 (60%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI P VCK++D K + +K RKK + T +KE+K RP + D QVK Sbjct: 1 MDLVEIAPDAQPPVCKVMDYGKKLFDEKKQQAANRKKARQTQVKEIKFRPGTEEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G K K++ +FRGRE+ HQ++G EL+ + + E ++ +PK EGRQ+ Sbjct: 61 LRNLIRFLTHGDKTKVTCRFRGREMAHQEIGLELMLRVAKDLEEYGTVELQPKPEGRQIT 120 Query: 129 MILSS 133 M+L+ Sbjct: 121 MVLAP 125 >gi|303252806|ref|ZP_07338966.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247208|ref|ZP_07529258.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648367|gb|EFL78563.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856266|gb|EFM88419.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 159 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 89/132 (67%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D Sbjct: 26 AEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEG 85 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D Q+KL++I FL DG +VKI+V+FRGRE+ HQD+G ++L +K E++ ++ P K Sbjct: 86 DYQIKLRSILRFLEDGDRVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAPGKL 145 Query: 123 EGRQMIMILSSK 134 EGRQ +M+++ K Sbjct: 146 EGRQAVMVIAPK 157 >gi|302391180|ref|YP_003827000.1| bacterial translation initiation factor 3 (bIF-3) [Acetohalobium arabaticum DSM 5501] gi|302203257|gb|ADL11935.1| bacterial translation initiation factor 3 (bIF-3) [Acetohalobium arabaticum DSM 5501] Length = 174 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVE+ + P VC+ILD K +Y K A +A++ Q +KEV+M I Sbjct: 37 LDIAKDRGLDLVEVAPNAEPPVCRILDYGKYKYEQAKKAQKAKQNQNVMNVKEVQMSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+ + FL++ KVK+ +KFRGREI H+DLG +L+ + ++++++ +P Sbjct: 97 EEHDFNVKVNMGERFLKNKDKVKVKIKFRGREITHKDLGYDLMEDYYSELEDLAKMETKP 156 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 157 KMEGRNMLMILTP 169 >gi|188586438|ref|YP_001917983.1| translation initiation factor 3 (bIF-3) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351125|gb|ACB85395.1| translation initiation factor 3 (bIF-3) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 153 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + P VC+I+D K +Y K +A+KKQK+ +KEVK+RP I Sbjct: 18 LKIAEENNLDLVTVAPKAKPPVCRIMDYGKFKYEQNKKEKQAKKKQKTINVKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL FL+ KVK+++ FRGREI H + G+EL + + +I+ I+ +P Sbjct: 78 EEHDFNTKLNNARKFLKKEDKVKVTIMFRGREITHPENGKELCQKMAKEVEDIAVIEKKP 137 Query: 121 KFEGRQMIMILSSK 134 EG+ MIM+L+ + Sbjct: 138 SVEGKNMIMVLAPR 151 >gi|312143808|ref|YP_003995254.1| translation initiation factor IF-3 [Halanaerobium sp. 'sapolanicus'] gi|311904459|gb|ADQ14900.1| translation initiation factor IF-3 [Halanaerobium sp. 'sapolanicus'] Length = 189 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 80/129 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLVE+ P VC+I+D K +Y K EA+K Q +KEV+M I+ H Sbjct: 56 AAEQGLDLVEVAPQANPPVCRIMDYGKYKYEQAKKEKEAKKNQNVMNVKEVQMGVKIEDH 115 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKLK FL + KVK+ ++FRGRE+MH++LG L+ + E+ +I +++ +PK E Sbjct: 116 DFNVKLKQARRFLNNKDKVKVRIRFRGREMMHKELGYNLMDRLIEQTDDIGKVESKPKME 175 Query: 124 GRQMIMILS 132 GR M+M L+ Sbjct: 176 GRNMMMFLT 184 >gi|295399483|ref|ZP_06809465.1| translation initiation factor IF-3 [Geobacillus thermoglucosidasius C56-YS93] gi|294978949|gb|EFG54545.1| translation initiation factor IF-3 [Geobacillus thermoglucosidasius C56-YS93] Length = 124 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 72/119 (60%) Query: 16 SSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGF 75 + P VC+I+D K R+ QK EARKKQK +KEV++ P I+ HD KL+ F Sbjct: 3 PNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTIEEHDFNTKLRNARKF 62 Query: 76 LRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 L G KVK +++F+GR I H+++G+ +L E +I ++ PK +GR M ++L+ K Sbjct: 63 LEKGDKVKATIRFKGRAITHKEIGQRVLERFSEACSDIGVVETAPKMDGRSMFLVLAPK 121 >gi|19552595|ref|NP_600597.1| translation initiation factor IF-3 [Corynebacterium glutamicum ATCC 13032] gi|62390263|ref|YP_225665.1| translation initiation factor IF-3 [Corynebacterium glutamicum ATCC 13032] gi|23821719|sp|Q8NQP8|IF3_CORGL RecName: Full=Translation initiation factor IF-3 gi|21324146|dbj|BAB98771.1| Translation initiation factor IF3 [Corynebacterium glutamicum ATCC 13032] gi|41325600|emb|CAF21389.1| TRANSLATION INITIATION FACTOR IF3 PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 189 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 52 KLAFDADLDLVEVAPNAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 111 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + ++ K Sbjct: 112 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVVDFGIVETRAK 171 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 172 QDGRNMTMVLGP 183 >gi|308126053|ref|ZP_05778795.2| translation initiation factor IF-3 [Vibrio parahaemolyticus K5030] gi|308113199|gb|EFO50739.1| translation initiation factor IF-3 [Vibrio parahaemolyticus K5030] Length = 159 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 30 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 89 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P + EGRQ Sbjct: 90 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVEAFPSRIEGRQ 149 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 150 MIMVLAPK 157 >gi|29345833|ref|NP_809336.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron VPI-5482] gi|39931281|sp|Q8AAP1|IF3_BACTN RecName: Full=Translation initiation factor IF-3 gi|29337726|gb|AAO75530.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron VPI-5482] Length = 185 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPK 172 >gi|229817383|ref|ZP_04447665.1| hypothetical protein BIFANG_02645 [Bifidobacterium angulatum DSM 20098] gi|229785172|gb|EEP21286.1| hypothetical protein BIFANG_02645 [Bifidobacterium angulatum DSM 20098] Length = 257 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + +KE++ R I Sbjct: 57 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQNTAEVKEIRFRLKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + E I+ +P Sbjct: 117 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAAEVEEYGTIESQP 176 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM+L+ K Sbjct: 177 KQEGRNIIMVLAPK 190 >gi|94967744|ref|YP_589792.1| translation initiation factor 3 [Candidatus Koribacter versatilis Ellin345] gi|94549794|gb|ABF39718.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Koribacter versatilis Ellin345] Length = 249 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLVE+ + P VC+I+D K Y +K A+K Q +KEVK R + Sbjct: 72 LKLAKEKNLDLVEVSPTAQPPVCRIMDFGKFMYETEKRERAAKKHQHVITVKEVKFRINV 131 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + FL +G KVK ++ FRGRE+ Q LGRE+L + + G+ ++ P Sbjct: 132 DEHDYQTKKNHVLRFLGEGDKVKATIFFRGREMTRQGLGREILERVIKDIGDKGIVEFRP 191 Query: 121 KFEGRQMIMILSS 133 + EG + +IL+ Sbjct: 192 RQEGNTLHLILAP 204 >gi|284045074|ref|YP_003395414.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684] gi|283949295|gb|ADB52039.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684] Length = 357 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE +LDLVE+ + P VC+ILD K RY + ARK Q+ I+E+K RP I Sbjct: 47 LRMAQERDLDLVEVAADARPPVCRILDYSKYRYEQAQKQKAARKHQQQITIREIKFRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D K + FL+ KVK+++ FRGRE+ H + G+ LL + E +++ ++ P Sbjct: 107 AQNDYDTKKGHVTRFLKHKDKVKVTIMFRGREVTHPERGQILLERLAEELADLAVVEQRP 166 Query: 121 KFEGRQMIMIL-SSKCV 136 +GR M M+L SK V Sbjct: 167 IQDGRNMTMMLGPSKAV 183 >gi|319760485|ref|YP_004124423.1| translation initiation factor IF-3 [Candidatus Blochmannia vafer str. BVAF] gi|318039199|gb|ADV33749.1| translation initiation factor IF-3 [Candidatus Blochmannia vafer str. BVAF] Length = 193 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI + P VCKI+D K Y K+ E +KKQK +KE+K RP Sbjct: 37 IKQAESVGLDLVEISPNSDPPVCKIMDYGKFLYEKSKSTKEQKKKQKIIHVKEIKFRPST 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q KL+ I FL +GCK+KI+++FRG E++H +G ++L I+ E++ I+ P Sbjct: 97 DEGDYQTKLRNIIKFLSEGCKIKITLRFRGGELIHHQIGMKVLYRIRNELHELATIEFFP 156 Query: 121 -KFEGRQMIMILSSK 134 K EGRQM MIL K Sbjct: 157 KKIEGRQMTMILIPK 171 >gi|257452488|ref|ZP_05617787.1| protein translation initiation factor 3 [Fusobacterium sp. 3_1_5R] gi|257466355|ref|ZP_05630666.1| protein translation initiation factor 3 [Fusobacterium gonidiaformans ATCC 25563] Length = 170 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 37 LEIAANQDLDLVEIAATAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTVVKEVKVTARI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+ I FL KVK+++ GRE MH LG L + E+F E + D + Sbjct: 97 DAHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEVAEKFAETA--DVDK 154 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 155 KYAEKQKHIILTPK 168 >gi|153839386|ref|ZP_01992053.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ3810] gi|260878404|ref|ZP_05890759.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AN-5034] gi|260896983|ref|ZP_05905479.1| translation initiation factor IF-3 [Vibrio parahaemolyticus Peru-466] gi|260901782|ref|ZP_05910177.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ4037] gi|149747081|gb|EDM58069.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ3810] gi|308087792|gb|EFO37487.1| translation initiation factor IF-3 [Vibrio parahaemolyticus Peru-466] gi|308091341|gb|EFO41036.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AN-5034] gi|308108050|gb|EFO45590.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ4037] gi|328472988|gb|EGF43836.1| translation initiation factor 3 [Vibrio parahaemolyticus 10329] Length = 129 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/127 (47%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P + EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVEAFPSRIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|189461813|ref|ZP_03010598.1| hypothetical protein BACCOP_02479 [Bacteroides coprocola DSM 17136] gi|189431407|gb|EDV00392.1| hypothetical protein BACCOP_02479 [Bacteroides coprocola DSM 17136] Length = 191 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E + DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LKLAEEHDADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 LLEGKRMTISLSPK 172 >gi|160883805|ref|ZP_02064808.1| hypothetical protein BACOVA_01777 [Bacteroides ovatus ATCC 8483] gi|237716079|ref|ZP_04546560.1| translation initiation factor IF-3 [Bacteroides sp. D1] gi|262407691|ref|ZP_06084239.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_22] gi|294643799|ref|ZP_06721597.1| translation initiation factor IF-3 [Bacteroides ovatus SD CC 2a] gi|294808459|ref|ZP_06767212.1| translation initiation factor IF-3 [Bacteroides xylanisolvens SD CC 1b] gi|156110890|gb|EDO12635.1| hypothetical protein BACOVA_01777 [Bacteroides ovatus ATCC 8483] gi|229443726|gb|EEO49517.1| translation initiation factor IF-3 [Bacteroides sp. D1] gi|262354499|gb|EEZ03591.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_22] gi|292640888|gb|EFF59108.1| translation initiation factor IF-3 [Bacteroides ovatus SD CC 2a] gi|294444387|gb|EFG13101.1| translation initiation factor IF-3 [Bacteroides xylanisolvens SD CC 1b] Length = 203 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|298480839|ref|ZP_06999034.1| translation initiation factor IF-3 [Bacteroides sp. D22] gi|295085228|emb|CBK66751.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides xylanisolvens XB1A] gi|298272862|gb|EFI14428.1| translation initiation factor IF-3 [Bacteroides sp. D22] Length = 203 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|293372833|ref|ZP_06619211.1| translation initiation factor IF-3 [Bacteroides ovatus SD CMC 3f] gi|292632208|gb|EFF50808.1| translation initiation factor IF-3 [Bacteroides ovatus SD CMC 3f] Length = 203 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|220917091|ref|YP_002492395.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-1] gi|254803480|sp|B8J830|IF3_ANAD2 RecName: Full=Translation initiation factor IF-3 gi|219954945|gb|ACL65329.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 230 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 83/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP + H Sbjct: 50 AQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRTEEH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P+ E Sbjct: 110 DYDTKIKKVRAFLGEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAPRME 169 Query: 124 GRQMIMILSS 133 GRQM MIL+ Sbjct: 170 GRQMFMILAP 179 >gi|197122309|ref|YP_002134260.1| translation initiation factor IF-3 [Anaeromyxobacter sp. K] gi|238689844|sp|B4UAN5|IF3_ANASK RecName: Full=Translation initiation factor IF-3 gi|196172158|gb|ACG73131.1| translation initiation factor IF-3 [Anaeromyxobacter sp. K] Length = 232 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 83/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP + H Sbjct: 50 AQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRTEEH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P+ E Sbjct: 110 DYDTKIKKVRAFLGEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAPRME 169 Query: 124 GRQMIMILSS 133 GRQM MIL+ Sbjct: 170 GRQMFMILAP 179 >gi|209695238|ref|YP_002263167.1| translation initiation factor IF-3 [Aliivibrio salmonicida LFI1238] gi|238054432|sp|B6EN33|IF3_ALISL RecName: Full=Translation initiation factor IF-3 gi|208009190|emb|CAQ79444.1| translation initiation factor IF-3 [Aliivibrio salmonicida LFI1238] Length = 183 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A +DLVEI + P VC+++D K + K A E +KKQK KE+K RP Sbjct: 47 LDVALTAGVDLVEISPNAEPPVCRVMDYGKFLFEKAKAAKEQKKKQKQVQTKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL +G KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 107 DIGDYQVKLRNLTGFLEEGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 166 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 167 TRIEGRQMIMVLAPK 181 >gi|312622558|ref|YP_004024171.1| translation initiation factor if-3 [Caldicellulosiruptor kronotskyensis 2002] gi|312203025|gb|ADQ46352.1| translation initiation factor IF-3 [Caldicellulosiruptor kronotskyensis 2002] Length = 166 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ + ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINRFIEKIKDYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|320093955|ref|ZP_08025784.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979113|gb|EFW10627.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178 str. F0338] Length = 222 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 44 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + + G+++ ++ P Sbjct: 104 DDHDFAVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLRRLADEIGDLATVESMP 163 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 164 RQDGRNMTMVLAP 176 >gi|309389088|gb|ADO76968.1| bacterial translation initiation factor 3 (bIF-3) [Halanaerobium praevalens DSM 2228] Length = 183 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 82/131 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E +DLVE+ P VC+I+D K +Y K EA+K Q +KEV+M I+ H Sbjct: 50 AAEYGMDLVEVAPQANPPVCRIMDYGKYKYEQAKKEKEAKKNQNVMNVKEVQMGVKIEDH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKLK FL + KVK+ ++FRGRE+MH++LG +L+ + E+ +I +++ +PK E Sbjct: 110 DFNVKLKQARRFLNNKDKVKVRIRFRGREMMHKELGYDLMDRLIEQTKDIGKVESKPKME 169 Query: 124 GRQMIMILSSK 134 GR M+M L+ + Sbjct: 170 GRNMMMFLTPE 180 >gi|19703670|ref|NP_603232.1| translation initiation factor IF-3 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327259|ref|ZP_06869814.1| translation initiation factor IF3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22095767|sp|Q8R5Y3|IF3_FUSNN RecName: Full=Translation initiation factor IF-3 gi|19713790|gb|AAL94531.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155616|gb|EFG96378.1| translation initiation factor IF3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 188 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 54 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E + + E Sbjct: 114 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFSETAEV--EK 171 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K V Sbjct: 172 KYADKQKHLILSPKKV 187 >gi|315917511|ref|ZP_07913751.1| translation initiation factor IF-3 [Fusobacterium gonidiaformans ATCC 25563] gi|317059029|ref|ZP_07923514.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_5R] gi|313684705|gb|EFS21540.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_5R] gi|313691386|gb|EFS28221.1| translation initiation factor IF-3 [Fusobacterium gonidiaformans ATCC 25563] Length = 179 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 46 LEIAANQDLDLVEIAATAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTVVKEVKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+ I FL KVK+++ GRE MH LG L + E+F E + D + Sbjct: 106 DAHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEVAEKFAETA--DVDK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 164 KYAEKQKHIILTPK 177 >gi|307297789|ref|ZP_07577595.1| translation initiation factor IF-3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917049|gb|EFN47431.1| translation initiation factor IF-3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 175 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/136 (43%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y K EA+KK K + +KE+K R I Sbjct: 24 LRIAREKGLDLVLVAPAANPPVARIMDYGKYKYEKDKRKKEAKKKTKQSQLKEMKFRIRI 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K I FL G KV++ + FRGREI+ D GRE+L + ++ +IS ID P Sbjct: 84 DEHDFQTKTNRIKEFLEKGSKVRVVIMFRGREIVFSDKGREILERVADQLQQISDIDRPP 143 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M MIL K Sbjct: 144 KLEGRDMWMILKPKTT 159 >gi|320159658|ref|YP_004172882.1| translation initiation factor IF-3 [Anaerolinea thermophila UNI-1] gi|319993511|dbj|BAJ62282.1| translation initiation factor IF-3 [Anaerolinea thermophila UNI-1] Length = 215 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ TP VC+++D K Y K EA+K Q +KE+++RP Sbjct: 53 LRIARDAELDLVEVAPGATPPVCRVMDFGKFLYERAKKEREAKKAQTRIEVKEIRLRPKT 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + H K + +L +G KVK++V+FRGREI + +L E L I E +I+ I+ P Sbjct: 113 NEHHRGFKTRDARRWLLEGNKVKVTVRFRGREITYPELALEDLREIAEELSDIATIEQAP 172 Query: 121 KFEGRQMIMILSS 133 EG+ M M+LS Sbjct: 173 VLEGKVMTMVLSP 185 >gi|188533976|ref|YP_001907773.1| Translation initiation factor IF-3 [Erwinia tasmaniensis Et1/99] gi|259908577|ref|YP_002648933.1| Translation initiation factor IF-3 [Erwinia pyrifoliae Ep1/96] gi|188029018|emb|CAO96886.1| Translation initiation factor IF-3 [Erwinia tasmaniensis Et1/99] gi|224964199|emb|CAX55706.1| Translation initiation factor IF-3 [Erwinia pyrifoliae Ep1/96] gi|283478546|emb|CAY74462.1| Translation initiation factor IF-3 [Erwinia pyrifoliae DSM 12163] gi|310767523|gb|ADP12473.1| Translation initiation factor IF-3 [Erwinia sp. Ejp617] Length = 141 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 61 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAVVE 120 Query: 118 CEP-KFEGRQMIMILSSK 134 P + EGRQMIM+L+ K Sbjct: 121 SFPTRIEGRQMIMVLAPK 138 >gi|333029962|ref|ZP_08458023.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM 18011] gi|332740559|gb|EGJ71041.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM 18011] Length = 189 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI P VC+I D K Y ++K E + KQ +KE++ P Sbjct: 54 LKMAEDRGLDLVEISPKAKPPVCRITDFSKFIYQLKKRQKEQKAKQAKVNVKEIRFGPQT 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KVK V FRGR I+ ++ G LL E +++D P Sbjct: 114 DDHDYNFKLKHAISFLEDGDKVKAFVFFRGRSIVFKEQGEVLLLRFANDLEEYAKVDQLP 173 Query: 121 KFEGRQMIMILSSK 134 EG++MI++LS K Sbjct: 174 VLEGKRMILLLSPK 187 >gi|315634191|ref|ZP_07889480.1| translation initiation factor IF3 [Aggregatibacter segnis ATCC 33393] gi|315477441|gb|EFU68184.1| translation initiation factor IF3 [Aggregatibacter segnis ATCC 33393] Length = 154 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D D QVKL Sbjct: 27 DLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKL 86 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMI 128 +++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P K EGRQ + Sbjct: 87 RSLIRFLEDGDKAKITVRFRGREMAHQDIGFDVLERVKNDLADISVVESAPGKLEGRQAV 146 Query: 129 MILSSK 134 M+L+ K Sbjct: 147 MVLAPK 152 >gi|237742396|ref|ZP_04572877.1| translation initiation factor IF-3 [Fusobacterium sp. 4_1_13] gi|256845724|ref|ZP_05551182.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_36A2] gi|294785030|ref|ZP_06750318.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_27] gi|229430044|gb|EEO40256.1| translation initiation factor IF-3 [Fusobacterium sp. 4_1_13] gi|256719283|gb|EEU32838.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_36A2] gi|294486744|gb|EFG34106.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_27] Length = 180 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E + + E Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAETAEV--EK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPK 177 >gi|323341711|ref|ZP_08081944.1| translation initiation factor IF3 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464136|gb|EFY09329.1| translation initiation factor IF3 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 196 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E NLDL+ + + P VCKI+D + R+ +QK A EA+K Q T IK +++ PVI Sbjct: 60 LEKAFEHNLDLLCVAPNGNPPVCKIVDYGRYRFELQKKAKEAKKHQHVTQIKPLRLSPVI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ +L +G KVK+ ++FRGR I ++GR+ + + E ++ ++ P Sbjct: 120 DQHDFDTKLRHARKWLEEGIKVKVDMRFRGRLITRLEVGRKTMDSFIEECSDLGSVEKRP 179 Query: 121 KFEGRQMIMILSS 133 K EG M +++S Sbjct: 180 KLEGNTMSVVISP 192 >gi|262066670|ref|ZP_06026282.1| translation initiation factor IF-3 [Fusobacterium periodonticum ATCC 33693] gi|291379629|gb|EFE87147.1| translation initiation factor IF-3 [Fusobacterium periodonticum ATCC 33693] Length = 141 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI TP VCK++D K +Y + EA+K QK IKE+K+ I Sbjct: 7 LNLASSQGYDLVEIAPGATPPVCKVMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL ++ FL KVKI++ GRE MH +LG L I E+F E + + E Sbjct: 67 DSHDLETKLNQVNKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEV--EK 124 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 125 KYADKQKHLILSPK 138 >gi|114332290|ref|YP_748512.1| translation initiation factor IF-3 [Nitrosomonas eutropha C91] gi|114309304|gb|ABI60547.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosomonas eutropha C91] Length = 162 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 87/133 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E+ +D+VEI S P VC+++D K Y K +A+ +QK +KE+K+RP D Sbjct: 19 ELAEESGVDIVEIAPSAEPPVCRLMDYGKYLYQESKKKHDAKLRQKQIQVKEIKLRPNTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL +G KVK++++FRGRE+ HQ+ G LL ++E E + ++ P+ Sbjct: 79 EGDYSIKLRNLINFLNEGDKVKVTLRFRGREMAHQEFGIRLLERVREELEEHAVVEQFPR 138 Query: 122 FEGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 139 LEGRQMVMVLAPR 151 >gi|255527630|ref|ZP_05394491.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296185308|ref|ZP_06853718.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|255508672|gb|EET85051.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296050142|gb|EFG89566.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] Length = 150 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLV I + P VC+I+D K Y K EA+K QK IKE+++RP I Sbjct: 16 LNRARDEGLDLVMISPTAKPPVCRIMDYNKFLYEQSKKEKEAKKNQKVVDIKEIRLRPNI 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+Q+K FL KVK+S++FRGRE + L ++ + + + I+ P Sbjct: 76 EEHDIQIKANNAKKFLSSDNKVKVSIRFRGRENNYTHLASKVFDVFISKLEDTAVIEKSP 135 Query: 121 KFEGRQMIMILSSK 134 K EG MIMIL+ K Sbjct: 136 KLEGNNMIMILAPK 149 >gi|225568223|ref|ZP_03777248.1| hypothetical protein CLOHYLEM_04297 [Clostridium hylemonae DSM 15053] gi|225162942|gb|EEG75561.1| hypothetical protein CLOHYLEM_04297 [Clostridium hylemonae DSM 15053] Length = 164 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA LDLV+I P VCKI+D K +Y + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEAELDLVKIAPKAQPPVCKIIDYGKYKYELARKEKEAKKKQKTVELKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H R +L + E+ +++ I+ Sbjct: 90 DTNDLNTKINNAKKFIGKGNKVKVTLRFRGREMAHVHQSRHILDDFAEQLADVATIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|313888399|ref|ZP_07822067.1| translation initiation factor IF-3 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845596|gb|EFR32989.1| translation initiation factor IF-3 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 222 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV + + P VC+I+D K RY +K EARKKQK +KE++ P I Sbjct: 81 IDLAISKKLDLVNVAPNAKPPVCRIMDYGKYRYEQEKKEKEARKKQKVINVKELRFSPNI 140 Query: 61 DLHDLQVKL-KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + HDL K +AID FL++G +VK+SV+FRGRE+ H DLGRE+L + E +D + Sbjct: 141 EDHDLNTKANRAID-FLKNGDRVKVSVRFRGREMGHTDLGREVLDKFYDLISEYGVVDKK 199 Query: 120 PKFEGRQMIMILSSK 134 PK EGR ++M LS + Sbjct: 200 PKMEGRSLVMFLSER 214 >gi|331001967|ref|ZP_08325487.1| translation initiation factor IF-3 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411763|gb|EGG91168.1| translation initiation factor IF-3 [Lachnospiraceae oral taxon 107 str. F0167] Length = 165 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/131 (44%), Positives = 82/131 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLV I + P VCKI+D K RY I + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AEEAGLDLVLIAPTAKPPVCKIIDYGKFRYEIARKDKEAKKKQKTIEIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ + FL G KVK++++FRGRE+ + +L + E E++ ID K E Sbjct: 93 DLNTKVSSARKFLEKGNKVKVTLRFRGREMARMFKSKYILDDFAEALSEVATIDKPSKAE 152 Query: 124 GRQMIMILSSK 134 GR ++M LS+K Sbjct: 153 GRSLVMFLSAK 163 >gi|160878605|ref|YP_001557573.1| translation initiation factor IF-3 [Clostridium phytofermentans ISDg] gi|160427271|gb|ABX40834.1| translation initiation factor IF-3 [Clostridium phytofermentans ISDg] Length = 164 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+ANLDLV+I + P VCKI+D K RY + + EA+KKQK T +KE+++ P I Sbjct: 30 LKMAQDANLDLVKIAPTAKPPVCKIVDYGKYRYELARKEKEAKKKQKVTDVKEIRLTPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K F+ G KVK+S++FRGRE+ H + +++L + E+ +++ ++ Sbjct: 90 DDNDLNTKANQARKFITKGDKVKVSLRFRGREMAHINSSKQILDSFFEKLQDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M L+ K Sbjct: 150 KMEGRSIFMFLTEK 163 >gi|110799853|ref|YP_696574.1| translation initiation factor IF-3 [Clostridium perfringens ATCC 13124] gi|110674500|gb|ABG83487.1| translation initiation factor IF-3 [Clostridium perfringens ATCC 13124] Length = 173 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 KMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPK 171 >gi|257790986|ref|YP_003181592.1| translation initiation factor IF-3 [Eggerthella lenta DSM 2243] gi|317488304|ref|ZP_07946867.1| translation initiation factor IF-3 [Eggerthella sp. 1_3_56FAA] gi|325830726|ref|ZP_08164110.1| translation initiation factor IF-3 [Eggerthella sp. HGA1] gi|257474883|gb|ACV55203.1| translation initiation factor IF-3 [Eggerthella lenta DSM 2243] gi|316912589|gb|EFV34135.1| translation initiation factor IF-3 [Eggerthella sp. 1_3_56FAA] gi|325487133|gb|EGC89576.1| translation initiation factor IF-3 [Eggerthella sp. HGA1] Length = 198 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLVEI + P VC+I+D K +Y A +ARK Q KE+K RP ID Sbjct: 44 RVADNQGLDLVEIAPNAEPPVCRIMDYGKFKYDQAIKAKQARKNQSKVETKEMKFRPKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K K + FL G KVKI++ FRGRE+ H +LG +L + + + + I+ +PK Sbjct: 104 VGDYTTKKKHVMRFLEAGNKVKITIMFRGREMAHPELGLTILERLADDLKDEAVIENQPK 163 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 164 MEGRNMHMLIAP 175 >gi|292899341|ref|YP_003538710.1| translation initiation factor IF-3 [Erwinia amylovora ATCC 49946] gi|291199189|emb|CBJ46303.1| translation initiation factor IF-3 [Erwinia amylovora ATCC 49946] Length = 183 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPK 180 >gi|59711823|ref|YP_204599.1| protein chain initiation factor IF-3 [Vibrio fischeri ES114] gi|59479924|gb|AAW85711.1| protein chain initiation factor IF-3 [Vibrio fischeri ES114] Length = 156 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVEI + P V +++D K + K A E +KKQK IKE+K RP Sbjct: 20 LDAALEAGVDLVEISPNAEPPVGRVMDYGKFLFEKAKAAKEQKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 80 DVGDYQVKLRNLTGFLEDGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 139 Query: 121 -KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 140 TRIEGRQMIMVLAPK 154 >gi|158333810|ref|YP_001514982.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] gi|226707352|sp|B0CD77|IF3_ACAM1 RecName: Full=Translation initiation factor IF-3 gi|158304051|gb|ABW25668.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] Length = 177 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E NLDLV + P VC+++D K ++ +K A EA+KKQ ++ +KEVKMR I Sbjct: 43 MEIADERNLDLVLVSDKADPPVCRVMDYGKFKFEQEKKAREAKKKQHTSDVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +V++ FL+ G KVK +V FRGREI H L LL + + + I P Sbjct: 103 QTHDYEVRVNHAKRFLKSGDKVKATVTFRGREIQHSHLAEALLKKMANDLLDFAEIQQAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS K Sbjct: 163 KREGRNMIMYLSPK 176 >gi|308176900|ref|YP_003916306.1| translation initiation factor IF-3 [Arthrobacter arilaitensis Re117] gi|307744363|emb|CBT75335.1| translation initiation factor IF-3 [Arthrobacter arilaitensis Re117] Length = 216 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ S P VCK++D K +Y A EARK Q +T +KEV+ R I Sbjct: 23 LRLALESDLDLVEVAPSAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEVRFRLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL E+ I+ P Sbjct: 83 DTHDYETKVGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLEKFAADVAEVGIIESSP 142 Query: 121 KFEGRQMIMILS 132 + +GR M+M++ Sbjct: 143 RIDGRNMVMVVG 154 >gi|18310876|ref|NP_562810.1| translation initiation factor IF-3 [Clostridium perfringens str. 13] gi|18145558|dbj|BAB81600.1| translation initiation factor IF-3 [Clostridium perfringens str. 13] Length = 134 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 81/132 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 1 MADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 61 HDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAKL 120 Query: 123 EGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 121 EGRNMIMILAPK 132 >gi|217077273|ref|YP_002334991.1| translation initiation factor IF-3 [Thermosipho africanus TCF52B] gi|217037128|gb|ACJ75650.1| translation initiation factor IF-3 [Thermosipho africanus TCF52B] Length = 141 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + + P V KI+D K +Y + K +A+K QK +K++K R I Sbjct: 7 LELAYSQKLDLILVAPNAKPPVAKIMDYGKYKYELAKREKKAKKNQKIIEVKQMKFRIKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL G KV++ + FRGRE+ D G+E+L I + +++ ++ P Sbjct: 67 DEHDYQTKLKHIKRFLEAGNKVRVVIMFRGREMAFADKGKEILDRIIKDLQDVASVEKAP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+L K Sbjct: 127 KLEGRDMWMMLKPKS 141 >gi|20532091|sp|Q8XJ67|IF3_CLOPE RecName: Full=Translation initiation factor IF-3 Length = 177 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 43 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 102 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 103 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 162 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 163 LEGRNMIMILAPK 175 >gi|332306909|ref|YP_004434760.1| translation initiation factor IF-3 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174238|gb|AEE23492.1| translation initiation factor IF-3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 154 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+++NLDLVEI + P VCK++D K + K E +KKQK +KE+K RP Sbjct: 18 LETAEQSNLDLVEISPNAEPPVCKVMDYGKFIFEKSKAQKEQKKKQKQIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P Sbjct: 78 DEGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKGDLEDIANCESFP 137 Query: 121 -KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 138 NRVEGRQMIMVLAP 151 >gi|300087924|ref|YP_003758446.1| translation initiation factor IF-3 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527657|gb|ADJ26125.1| translation initiation factor IF-3 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 199 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+ NLDLVE+ + P VC+++D K RY K + +K QK + +KEV++RP I Sbjct: 47 EMARRNNLDLVEVAPTSVPPVCRLMDYGKFRYEQTKKERDTKKNQKLSLLKEVRLRPKIG 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+++I L G KVK+++ FRGREI H +LG ++L E +++ ++ +P Sbjct: 107 AHDYDAKVRSIRKQLEAGDKVKVTIMFRGREITHSELGIKILKRAAEELSDVANVEGQPT 166 Query: 122 FEGRQMIMILSSK 134 G ++ ++L K Sbjct: 167 LLGSRIHLMLVPK 179 >gi|226324557|ref|ZP_03800075.1| hypothetical protein COPCOM_02341 [Coprococcus comes ATCC 27758] gi|225207005|gb|EEG89359.1| hypothetical protein COPCOM_02341 [Coprococcus comes ATCC 27758] Length = 164 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I + P VCKI+D K RY + EA+KKQ++ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPTAKPPVCKIIDYGKYRYEQARKEKEAKKKQRTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E+ +++ I+ Sbjct: 90 DTNDLNTKMNNARKFISKGNKVKVTLRFRGREMAHMQQSKHILDDFAEKMKDVAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 150 KLEGRSLSMVLTEK 163 >gi|168206055|ref|ZP_02632060.1| translation initiation factor IF-3 [Clostridium perfringens E str. JGS1987] gi|168215520|ref|ZP_02641145.1| translation initiation factor IF-3 [Clostridium perfringens NCTC 8239] gi|169343705|ref|ZP_02864704.1| translation initiation factor IF-3 [Clostridium perfringens C str. JGS1495] gi|169298265|gb|EDS80355.1| translation initiation factor IF-3 [Clostridium perfringens C str. JGS1495] gi|170662462|gb|EDT15145.1| translation initiation factor IF-3 [Clostridium perfringens E str. JGS1987] gi|182382354|gb|EDT79833.1| translation initiation factor IF-3 [Clostridium perfringens NCTC 8239] Length = 173 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPK 171 >gi|86158398|ref|YP_465183.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-C] gi|123723044|sp|Q2IJB8|IF3_ANADE RecName: Full=Translation initiation factor IF-3 gi|85774909|gb|ABC81746.1| bacterial translation initiation factor 3 (bIF-3) [Anaeromyxobacter dehalogenans 2CP-C] Length = 233 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 83/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP + H Sbjct: 50 AQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRTEEH 109 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P+ E Sbjct: 110 DYDTKIKKVREFLAEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAPRME 169 Query: 124 GRQMIMILSS 133 GRQM MIL+ Sbjct: 170 GRQMFMILAP 179 >gi|257471182|ref|ZP_05635181.1| translation initiation factor IF-3 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311085870|gb|ADP65952.1| translation initiation factor IF-3 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 129 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/127 (47%), Positives = 84/127 (66%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P K EGRQM Sbjct: 61 LRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFPSKIEGRQM 120 Query: 128 IMILSSK 134 IMIL+ K Sbjct: 121 IMILAPK 127 >gi|53712977|ref|YP_098969.1| translation initiation factor IF-3 [Bacteroides fragilis YCH46] gi|60681189|ref|YP_211333.1| translation initiation factor IF-3 [Bacteroides fragilis NCTC 9343] gi|253563045|ref|ZP_04840502.1| translation initiation factor IF-3 [Bacteroides sp. 3_2_5] gi|265763074|ref|ZP_06091642.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_16] gi|81315742|sp|Q5LEQ5|IF3_BACFN RecName: Full=Translation initiation factor IF-3 gi|81690705|sp|Q64VP1|IF3_BACFR RecName: Full=Translation initiation factor IF-3 gi|52215842|dbj|BAD48435.1| translation initiation factor IF-3 [Bacteroides fragilis YCH46] gi|60492623|emb|CAH07395.1| putative translation initiation factor IF-3 [Bacteroides fragilis NCTC 9343] gi|251946821|gb|EES87103.1| translation initiation factor IF-3 [Bacteroides sp. 3_2_5] gi|263255682|gb|EEZ27028.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_16] gi|301162678|emb|CBW22225.1| putative translation initiation factor IF-3 [Bacteroides fragilis 638R] Length = 203 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPK 172 >gi|297183124|gb|ADI19267.1| hypothetical protein [uncultured delta proteobacterium HF0200_39L23] Length = 173 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ + EA +DLVE+ P VC+++D K +Y K AR+ QK+ +KEVKM+P I Sbjct: 37 LEQSLEAGMDLVEVSPKSKPPVCRMMDFGKYKYQQSKKQHAARQNQKTIHLKEVKMKPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ FL +G KVK+++ F GR + H+DLG L+ + GE ++ Sbjct: 97 EEHDFQFKVRNTLRFLEEGDKVKVNIMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPV 156 Query: 121 KFEGRQMIMILSS 133 + EGR M MI++ Sbjct: 157 RNEGRSMFMIMAP 169 >gi|294787058|ref|ZP_06752312.1| translation initiation factor IF-3 [Parascardovia denticolens F0305] gi|315226707|ref|ZP_07868495.1| translation initiation factor IF3 [Parascardovia denticolens DSM 10105] gi|294485891|gb|EFG33525.1| translation initiation factor IF-3 [Parascardovia denticolens F0305] gi|315120839|gb|EFT83971.1| translation initiation factor IF3 [Parascardovia denticolens DSM 10105] Length = 232 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + +KE + R I Sbjct: 7 MNLAREANLDLVEVSAHAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEVKESRFRLKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+S+ RGRE G EL+ + + E ++ P Sbjct: 67 DDHDFEVKKNQVSRFLEGGDKVKVSIMLRGREQSRPVGGIELMQRLADEVEEFGTVESAP 126 Query: 121 KFEGRQMIMILSSK 134 + +GR +IM+L+ K Sbjct: 127 RRDGRNIIMVLAPK 140 >gi|253567820|ref|ZP_04845231.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6] gi|251841893|gb|EES69973.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6] Length = 201 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|257069327|ref|YP_003155582.1| translation initiation factor 3 [Brachybacterium faecium DSM 4810] gi|256560145|gb|ACU85992.1| bacterial translation initiation factor 3 (bIF-3) [Brachybacterium faecium DSM 4810] Length = 208 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V +++D K +Y A EARK Q +T KE++M I Sbjct: 34 LRLAQEADLDLVEVAPGANPPVARLMDYGKYKYEANLKAREARKNQANTVQKEIRMGLKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + ++ FL G KVK+ ++FRGRE + G +LL + E + ++ P Sbjct: 94 DTHDYETKRRNVEKFLDGGDKVKVIIRFRGREQARPERGVKLLQRMAEDVADYGFVESHP 153 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+ Sbjct: 154 RQDGRNMVMVFGP 166 >gi|298384717|ref|ZP_06994277.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14] gi|298262996|gb|EFI05860.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14] Length = 201 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|282877700|ref|ZP_06286515.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310] gi|281300272|gb|EFA92626.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310] Length = 232 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI P VC+++D K Y +K A E ++KQ +KE++ P Sbjct: 38 LDLARQQGVDLVEISPKAQPPVCRLVDYSKFLYQQKKRAKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK GFL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAQGFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|297621144|ref|YP_003709281.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU 86-1044] gi|297376445|gb|ADI38275.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU 86-1044] Length = 168 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++ LDLVEI + P VCKI+D K RY K E++K +KEVK++P I Sbjct: 31 LKRAEDEGLDLVEIAPNANPPVCKIIDYGKFRYDQTKREKESKKASHQIKVKEVKVKPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDLQ K++ FL G KVK++ FRGRE+ H+ +G L+ I E E++ + Sbjct: 91 NEHDLQTKMRHAKDFLEKGNKVKVTCMFRGREMAHKSIGERLIQRIVEDLNEVAVCETPM 150 Query: 121 KFEGRQMIMILSS 133 K GR + ++L+ Sbjct: 151 KMFGRFLTVVLAP 163 >gi|126667901|ref|ZP_01738866.1| Translation initiation factor 3 (IF-3) [Marinobacter sp. ELB17] gi|126627561|gb|EAZ98193.1| Translation initiation factor 3 (IF-3) [Marinobacter sp. ELB17] Length = 134 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 87/132 (65%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLV++ S P VCKI+D K + +K A+KKQ+ T +KE+K RP + Sbjct: 1 MAEEATLDLVQVTDS-DPIVCKIMDYGKKIFDEKKAKAVAKKKQRQTQVKELKFRPGTEE 59 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL G + KI+V+FRGRE+ HQ++G +L+ I+ E++ ++ PK Sbjct: 60 GDYQVKLRNLVRFLEAGDRGKITVRFRGREMAHQEIGMKLMERIEVDMEEMATVEMRPKM 119 Query: 123 EGRQMIMILSSK 134 EGRQM MI++ + Sbjct: 120 EGRQMTMIIAPR 131 >gi|254508868|ref|ZP_05120977.1| translation initiation factor IF-3 [Vibrio parahaemolyticus 16] gi|323493466|ref|ZP_08098588.1| translation initiation factor 3 [Vibrio brasiliensis LMG 20546] gi|219548182|gb|EED25198.1| translation initiation factor IF-3 [Vibrio parahaemolyticus 16] gi|323312289|gb|EGA65431.1| translation initiation factor 3 [Vibrio brasiliensis LMG 20546] Length = 129 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/127 (48%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|237722136|ref|ZP_04552617.1| translation initiation factor IF-3 [Bacteroides sp. 2_2_4] gi|260170789|ref|ZP_05757201.1| translation initiation factor IF-3 [Bacteroides sp. D2] gi|299149167|ref|ZP_07042228.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_23] gi|315919123|ref|ZP_07915363.1| conserved hypothetical protein [Bacteroides sp. D2] gi|229447946|gb|EEO53737.1| translation initiation factor IF-3 [Bacteroides sp. 2_2_4] gi|298512834|gb|EFI36722.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_23] gi|313692998|gb|EFS29833.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 203 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|255692011|ref|ZP_05415686.1| translation initiation factor IF-3 [Bacteroides finegoldii DSM 17565] gi|260622257|gb|EEX45128.1| translation initiation factor IF-3 [Bacteroides finegoldii DSM 17565] Length = 200 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|300716459|ref|YP_003741262.1| translation initiation factor IF-3 [Erwinia billingiae Eb661] gi|299062295|emb|CAX59412.1| Translation initiation factor IF-3 [Erwinia billingiae Eb661] Length = 141 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL +G K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 61 DDGDYQVKLRNLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAIVE 120 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 121 SFPSKIEGRQMIMVLAPK 138 >gi|325962863|ref|YP_004240769.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter phenanthrenivorans Sphe3] gi|323468950|gb|ADX72635.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter phenanthrenivorans Sphe3] Length = 337 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL E E+ ++ P Sbjct: 80 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFAEDVAEVGVVESSP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 140 RIDGRNMVMVVGP 152 >gi|237785422|ref|YP_002906127.1| translation initiation factor IF-3 [Corynebacterium kroppenstedtii DSM 44385] gi|237758334|gb|ACR17584.1| translation initiation factor IF-3 [Corynebacterium kroppenstedtii DSM 44385] Length = 183 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 76/132 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ P V KI+D K +Y + A E+R+ Q+ T +KE K RP ID Sbjct: 45 KLAYDADLDLVEVAPRAKPPVAKIMDYGKYKYEQAQKARESRRNQQQTVVKEQKFRPKID 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + + ++ PK Sbjct: 105 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVADAGVVESRPK 164 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 165 QDGRNMTMVLGP 176 >gi|223984491|ref|ZP_03634624.1| hypothetical protein HOLDEFILI_01918 [Holdemania filiformis DSM 12042] gi|223963562|gb|EEF67941.1| hypothetical protein HOLDEFILI_01918 [Holdemania filiformis DSM 12042] Length = 180 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDL+ + + P VCKI+D + R+ QK A EA++ Q T +K +++ PVI Sbjct: 45 LEKAYDYELDLLCVAPNGNPPVCKIVDYGRYRFESQKKAKEAKRNQHVTEVKPMRLSPVI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ ++ DG KVKI ++FRGR I ++G++++++ E+ +I+ ++ P Sbjct: 105 DTHDFDTKLRQARNWVEDGMKVKIDMRFRGRLITRLEVGKKVMNSFVEQMSDIASVEKAP 164 Query: 121 KFEGRQMIMILSSK 134 EG M ++L+ K Sbjct: 165 ALEGNTMSVVLTPK 178 >gi|239993780|ref|ZP_04714304.1| Translation initiation factor 3 [Alteromonas macleodii ATCC 27126] Length = 144 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 11 AEEAGLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTDEG 70 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P + Sbjct: 71 DYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKTDLEDIATCESFPRRV 130 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L+ Sbjct: 131 EGRQMIMVLAPN 142 >gi|109898813|ref|YP_662068.1| translation initiation factor IF-3 [Pseudoalteromonas atlantica T6c] gi|109701094|gb|ABG41014.1| bacterial translation initiation factor 3 (bIF-3) [Pseudoalteromonas atlantica T6c] Length = 154 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+++NLDLVEI + P VCK++D K + K E +KKQK +KE+K RP Sbjct: 18 LETAEQSNLDLVEISPNAEPPVCKVMDYGKFIFEKSKAQKEQKKKQKQIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P Sbjct: 78 DEGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKVDLEDIANCESFP 137 Query: 121 -KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 138 NRVEGRQMIMVLAP 151 >gi|269956116|ref|YP_003325905.1| translation initiation factor IF-3 [Xylanimonas cellulosilytica DSM 15894] gi|269304797|gb|ACZ30347.1| translation initiation factor IF-3 [Xylanimonas cellulosilytica DSM 15894] Length = 351 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P V K++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 40 LKLAQDADLDLVEVAPDARPPVAKLMDYGKFKYESDMKAREARRNQANTVLKEIRFRLKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G LL+ + E ++ ++ P Sbjct: 100 DAHDYETKKGHVVRFLEGGDKVKVMIMFRGREQSRPEMGVRLLTRLAEEVADLGSVESMP 159 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L Sbjct: 160 KQDGRNMTMVLGP 172 >gi|291563634|emb|CBL42450.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SS3/4] Length = 164 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++A LDLV+I + P VCKI+D K +Y + + EA+KKQK+ +KEV++ P ID Sbjct: 31 KMARDAELDLVKIAPAAKPPVCKIIDYGKYKYEMIRKEKEAKKKQKTIEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ + F+ G KVK++++FRGRE+ H + + +L + E+ +I+ +D K Sbjct: 91 TNDLNTKIGSARKFIEKGNKVKVTLRFRGREMAHMNQTKYILDDFAEKLSDIAVVDKPSK 150 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 151 VEGRSLVMFLTAK 163 >gi|323490462|ref|ZP_08095669.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2] gi|323395866|gb|EGA88705.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2] Length = 157 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 20 LEIAARVNLDLVLVAPQAKPPVARIMDHGKFKFEQQKKDREIRKNQKVIVVKEVRLSPSI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ P Sbjct: 80 DDHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLERFAEACKEVATVEQRP 139 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 140 KMDGRSMFLMLAP 152 >gi|300114473|ref|YP_003761048.1| translation initiation factor IF-3 [Nitrosococcus watsonii C-113] gi|299540410|gb|ADJ28727.1| translation initiation factor IF-3 [Nitrosococcus watsonii C-113] Length = 152 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA DLVEI P VC+I+D K + K A+KKQK IKEVK RP Sbjct: 18 LHVADEAGEDLVEIAPQADPPVCRIMDYGKYLFEENKKRQAAKKKQKQIQIKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+++ FL +G K K+S++FRGRE+ HQ+LG +LL ++ E ++ P Sbjct: 78 EEGDYQVKLRSLVRFLTEGDKTKVSLRFRGRELAHQELGLKLLERVRNDLEEYGVVEQHP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 KREGRQMVMVLAPK 151 >gi|256422753|ref|YP_003123406.1| translation initiation factor IF-3 [Chitinophaga pinensis DSM 2588] gi|256037661|gb|ACU61205.1| translation initiation factor IF-3 [Chitinophaga pinensis DSM 2588] Length = 239 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y +K E + K + +KE++ P Sbjct: 59 LRMAEEQGLDLVEISPNAVPPVCRIIDYNKFLYEKKKKEKEMKAKAHKSEVKEIRFTPNT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K + FL+DG KVK V+F+GR IM ++ G +L ER E+ ++ P Sbjct: 119 DDHDFDFKAKHAEKFLKDGNKVKTYVQFKGRAIMFKERGELILLKFAERLAEVGALEGMP 178 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI I + K Sbjct: 179 TMEGKRMIAIFAPKSA 194 >gi|146296774|ref|YP_001180545.1| translation initiation factor IF-3 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410350|gb|ABP67354.1| bacterial translation initiation factor 3 (bIF-3) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 200 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KEV++ I Sbjct: 65 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEVRLTTTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E + ++ +P Sbjct: 125 EDHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEMVKDYGIVEKKP 184 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 185 KLDGKNLTAVIAPK 198 >gi|332297585|ref|YP_004439507.1| Translation initiation factor IF-3 [Treponema brennaborense DSM 12168] gi|332180688|gb|AEE16376.1| Translation initiation factor IF-3 [Treponema brennaborense DSM 12168] Length = 173 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ P VCKILD K R+ +K +++K QK +KE++M+P I Sbjct: 37 LKMAKERELDLVEVAPQANPPVCKILDYGKYRFEQEKKLRDSKKNQKLLKLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL K K + FL +G KVK++++FRGRE+ H +LG ++L + +R + ++ +P Sbjct: 97 GAGDLDFKSKHVQEFLAEGNKVKVTIRFRGRELAHTELGYDVLKEVLKRLDDEYVVEKQP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M LS K Sbjct: 157 AMEGRFMSMTLSPKA 171 >gi|283456369|ref|YP_003360933.1| protein translation initiation factor InfC [Bifidobacterium dentium Bd1] gi|283103003|gb|ADB10109.1| infC Bacterial Protein Translation Initiation Factor 3(IF-3) [Bifidobacterium dentium Bd1] Length = 201 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 10 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 70 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 129 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 130 KQEGRNIIMTLAPK 143 >gi|123442190|ref|YP_001006171.1| translation initiation factor IF-3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161612|ref|YP_004298189.1| translation initiation factor IF-3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166233787|sp|A1JMK2|IF3_YERE8 RecName: Full=Translation initiation factor IF-3 gi|122089151|emb|CAL11993.1| translation initiation factor [Yersinia enterocolitica subsp. enterocolitica 8081] gi|325665842|gb|ADZ42486.1| Translation initiation factor IF-3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 183 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 87/138 (63%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E S + Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKKDLTEDSDLAVVE 162 Query: 121 KF----EGRQMIMILSSK 134 F EGRQMIM+L+ K Sbjct: 163 SFPTRIEGRQMIMVLAPK 180 >gi|254974299|ref|ZP_05270771.1| translation initiation factor IF-3 [Clostridium difficile QCD-66c26] gi|255091696|ref|ZP_05321174.1| translation initiation factor IF-3 [Clostridium difficile CIP 107932] gi|255099797|ref|ZP_05328774.1| translation initiation factor IF-3 [Clostridium difficile QCD-63q42] gi|255305682|ref|ZP_05349854.1| translation initiation factor IF-3 [Clostridium difficile ATCC 43255] gi|255313424|ref|ZP_05355007.1| translation initiation factor IF-3 [Clostridium difficile QCD-76w55] gi|255516111|ref|ZP_05383787.1| translation initiation factor IF-3 [Clostridium difficile QCD-97b34] gi|255649207|ref|ZP_05396109.1| translation initiation factor IF-3 [Clostridium difficile QCD-37x79] gi|255654726|ref|ZP_05400135.1| translation initiation factor IF-3 [Clostridium difficile QCD-23m63] gi|260682382|ref|YP_003213667.1| translation initiation factor IF-3 [Clostridium difficile CD196] gi|260685981|ref|YP_003217114.1| translation initiation factor IF-3 [Clostridium difficile R20291] gi|296449469|ref|ZP_06891249.1| translation initiation factor IF3 [Clostridium difficile NAP08] gi|296878208|ref|ZP_06902220.1| translation initiation factor IF3 [Clostridium difficile NAP07] gi|306519311|ref|ZP_07405658.1| translation initiation factor IF-3 [Clostridium difficile QCD-32g58] gi|260208545|emb|CBA61206.1| translation initiation factor IF-3 [Clostridium difficile CD196] gi|260211997|emb|CBE02531.1| translation initiation factor IF-3 [Clostridium difficile R20291] gi|296261708|gb|EFH08523.1| translation initiation factor IF3 [Clostridium difficile NAP08] gi|296430777|gb|EFH16612.1| translation initiation factor IF3 [Clostridium difficile NAP07] Length = 141 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 86/135 (63%), Gaps = 6/135 (4%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 9 MANSKNLDLVQISPNANPPVCKIMDYGKFRYEQARKEKEAKKKQKTIVVKEVRLRPGIEQ 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRIDCE 119 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ +I + FGE ++ Sbjct: 69 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFLDIIKEFGEPTK---A 125 Query: 120 PKFEGRQMIMILSSK 134 P FEG M++I+ K Sbjct: 126 PAFEGNNMVVIIDPK 140 >gi|313159203|gb|EFR58576.1| translation initiation factor IF-3 [Alistipes sp. HGB5] Length = 157 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+EI P VC+I D +K Y +K A E + Q IKE++ P Sbjct: 20 LKLADSMELDLIEISPKAEPPVCRIADYQKFLYQQKKKAKELKANQVKVVIKEIRFGPQT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++GCKVK V FRGR I+ ++ G LL E+++++ P Sbjct: 80 DDHDYNFKLKHATNFLKEGCKVKAYVFFRGRSIVFKEQGEILLLRFATDLEEVAKVEMMP 139 Query: 121 KFEGRQMIMILSSKC 135 K +G++M M+L+ K Sbjct: 140 KLDGKKMNMMLAPKT 154 >gi|163839501|ref|YP_001623906.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC 33209] gi|162952977|gb|ABY22492.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC 33209] Length = 353 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPMAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL+ E E+ ++ P Sbjct: 80 DKHDYETKTGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLNRFAEDVTEVGAVESTP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 140 RIDGRNMVMVIGP 152 >gi|183602462|ref|ZP_02963828.1| translation initiation factor If-3 [Bifidobacterium animalis subsp. lactis HN019] gi|219683224|ref|YP_002469607.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis AD011] gi|241191184|ref|YP_002968578.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196590|ref|YP_002970145.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218381|gb|EDT89026.1| translation initiation factor If-3 [Bifidobacterium animalis subsp. lactis HN019] gi|219620874|gb|ACL29031.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis AD011] gi|240249576|gb|ACS46516.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251144|gb|ACS48083.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794177|gb|ADG33712.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis V9] Length = 224 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G E+L + E ++ ++ P Sbjct: 101 DDHDFEVKKGHVERFLNAGDKVKVTIMLRGREQSRPIGGVEMLQRLAEEVSDLGTVEHAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|297623447|ref|YP_003704881.1| translation initiation factor IF-3 [Truepera radiovictrix DSM 17093] gi|297164627|gb|ADI14338.1| translation initiation factor IF-3 [Truepera radiovictrix DSM 17093] Length = 181 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDL + P V K++D K RY +Q+ EAR+K + +K +K R I Sbjct: 38 LRLAREAELDLALVGEGAQPPVAKLMDYGKYRYELQQQEKEARRKSRQQEMKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ + FL+ G KVK+++ FRGRE H +LG+E+L+ + +I+ ++ P Sbjct: 98 DDHDYETKVNHVRRFLKGGHKVKLTIMFRGRERTHPELGQEILNRVASDVSDIAVVESAP 157 Query: 121 KFEGRQMIMILS 132 G M M+L Sbjct: 158 SLAGMDMNMVLG 169 >gi|315181383|gb|ADT88296.1| translation initiation factor IF-3 [Vibrio furnissii NCTC 11218] Length = 166 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K EGRQ Sbjct: 97 KLRNLTSFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEFAVVESFPTKIEGRQ 156 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 157 MIMVLAPK 164 >gi|153814480|ref|ZP_01967148.1| hypothetical protein RUMTOR_00693 [Ruminococcus torques ATCC 27756] gi|317500522|ref|ZP_07958745.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089378|ref|ZP_08338277.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847974|gb|EDK24892.1| hypothetical protein RUMTOR_00693 [Ruminococcus torques ATCC 27756] gi|316898111|gb|EFV20159.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 8_1_57FAA] gi|330404746|gb|EGG84284.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 3_1_46FAA] Length = 164 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I + P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 MKIAQEAELDLVKIAPAAKPPVCKIIDYGKYKYEQARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E +++ ++ Sbjct: 90 DTNDLNTKINNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAETLADVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRAMSMVLAEK 163 >gi|126698264|ref|YP_001087161.1| translation initiation factor IF-3 [Clostridium difficile 630] gi|115249701|emb|CAJ67518.1| Translation initiation factor IF-3 [Clostridium difficile] Length = 169 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 86/135 (63%), Gaps = 6/135 (4%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 37 MANSKNLDLVQISPNANPPVCKIMDYGKFRYEQARKEKEAKKKQKTIVVKEVRLRPGIEQ 96 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRIDCE 119 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ +I + FGE ++ Sbjct: 97 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFLDIIKEFGEPTKA--- 153 Query: 120 PKFEGRQMIMILSSK 134 P FEG M++I+ K Sbjct: 154 PAFEGNNMVVIIDPK 168 >gi|322833538|ref|YP_004213565.1| translation initiation factor IF-3 [Rahnella sp. Y9602] gi|321168739|gb|ADW74438.1| translation initiation factor IF-3 [Rahnella sp. Y9602] Length = 183 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 90/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDSELAVVE 162 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPK 180 >gi|260770314|ref|ZP_05879247.1| translation initiation factor 3 [Vibrio furnissii CIP 102972] gi|260615652|gb|EEX40838.1| translation initiation factor 3 [Vibrio furnissii CIP 102972] Length = 129 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K EGRQM Sbjct: 61 LRNLTSFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEFAVVESFPTKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|167763512|ref|ZP_02435639.1| hypothetical protein BACSTE_01886 [Bacteroides stercoris ATCC 43183] gi|167698806|gb|EDS15385.1| hypothetical protein BACSTE_01886 [Bacteroides stercoris ATCC 43183] Length = 200 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPK 172 >gi|119961908|ref|YP_947378.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1] gi|119948767|gb|ABM07678.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1] Length = 344 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 76/132 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL E E+ I+ P Sbjct: 80 DKHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFAEDVAEVGIIESSP 139 Query: 121 KFEGRQMIMILS 132 + +GR M+M++ Sbjct: 140 RIDGRNMVMVIG 151 >gi|306822458|ref|ZP_07455836.1| translation initiation factor IF3 [Bifidobacterium dentium ATCC 27679] gi|304554003|gb|EFM41912.1| translation initiation factor IF3 [Bifidobacterium dentium ATCC 27679] Length = 232 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|167757066|ref|ZP_02429193.1| hypothetical protein CLORAM_02615 [Clostridium ramosum DSM 1402] gi|237735863|ref|ZP_04566344.1| translation initiation factor IF-3 [Mollicutes bacterium D7] gi|167703241|gb|EDS17820.1| hypothetical protein CLORAM_02615 [Clostridium ramosum DSM 1402] gi|229381608|gb|EEO31699.1| translation initiation factor IF-3 [Coprobacillus sp. D7] Length = 184 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A LDLV + + P VC+I+D K R+ QK A E ++ K +KE ++ I Sbjct: 49 IDIAYGAGLDLVCVAPNGKPPVCRIMDFGKYRFEQQKKAKEMKRNSKVVALKETQLSVTI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L +G KVKI+++FRGR++ H DLG++++ + E+ +I+ Sbjct: 109 DVHDKNVKLKRTLKWLEEGNKVKIAIRFRGRQLAHMDLGKKVIDDFVAECAEVGQIEKPA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR + I++ K Sbjct: 169 KLEGRTLTAIIAPK 182 >gi|332711009|ref|ZP_08430945.1| bacterial translation initiation factor 3 [Lyngbya majuscula 3L] gi|332350323|gb|EGJ29927.1| bacterial translation initiation factor 3 [Lyngbya majuscula 3L] Length = 176 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++ + FL+ G KVK ++ FRGREI H +L + LL + + E++ + P Sbjct: 102 EDHDYNVRVNQAERFLKSGDKVKATITFRGREIQHSNLAQALLERMAKDLQELAEVQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+LS K Sbjct: 162 KREGRNMMMLLSPK 175 >gi|289177294|gb|ADC84540.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bifidobacterium animalis subsp. lactis BB-12] Length = 233 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 50 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G E+L + E ++ ++ P Sbjct: 110 DDHDFEVKKGHVERFLNAGDKVKVTIMLRGREQSRPIGGVEMLQRLAEEVSDLGTVEHAP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 170 KQEGRNIIMTLAPK 183 >gi|171742545|ref|ZP_02918352.1| hypothetical protein BIFDEN_01658 [Bifidobacterium dentium ATCC 27678] gi|171278159|gb|EDT45820.1| hypothetical protein BIFDEN_01658 [Bifidobacterium dentium ATCC 27678] Length = 232 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|313891935|ref|ZP_07825536.1| translation initiation factor IF-3 [Dialister microaerophilus UPII 345-E] gi|329121027|ref|ZP_08249658.1| translation initiation factor IF3 [Dialister micraerophilus DSM 19965] gi|313119578|gb|EFR42769.1| translation initiation factor IF-3 [Dialister microaerophilus UPII 345-E] gi|327471189|gb|EGF16643.1| translation initiation factor IF3 [Dialister micraerophilus DSM 19965] Length = 174 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 4/134 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + LDLVE+ + P VC+I++ K RY QK E +KKQK +KEVK+RP I+ H Sbjct: 43 ADDRGLDLVEVAPNGRPPVCRIMNYGKYRYEQQKREKEEKKKQKVFQVKEVKLRPNIEDH 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE--PK 121 D VKLK+ FL DG KVK+++ FRGRE+ H +LG +L + + G+ +I CE PK Sbjct: 103 DFYVKLKSAQRFLSDGNKVKVTIMFRGREMTHPELGSNVLERVIKELGD--KIICEKSPK 160 Query: 122 FEGRQMIMILSSKC 135 EGR M M+++ K Sbjct: 161 LEGRNMTMVIAPKA 174 >gi|184201213|ref|YP_001855420.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201] gi|183581443|dbj|BAG29914.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201] Length = 314 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 78/131 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E++LDLVE+ + P V K++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 34 LRLARESDLDLVEVAPNAKPPVAKLMDFGKYKYEAAVKARESRKNQANTVLKEVRFRLKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE +G LL + E E+ ++ P Sbjct: 94 DTHDYETKVGHAKRFLSAGDKVKAMIQFRGREQQRPAMGVRLLERLAEDVAEVGVVETAP 153 Query: 121 KFEGRQMIMIL 131 + +GR M+M++ Sbjct: 154 RVDGRNMVMVI 164 >gi|329895718|ref|ZP_08271122.1| Translation initiation factor 3 [gamma proteobacterium IMCC3088] gi|328922194|gb|EGG29549.1| Translation initiation factor 3 [gamma proteobacterium IMCC3088] Length = 184 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV+I S P+VCKI+D K + +K RKKQK T +KE+K RP D+ D Q+KL Sbjct: 58 DLVQIADS-DPAVCKIMDYGKHVFEAKKQKAAQRKKQKRTQVKEMKFRPGTDIGDYQIKL 116 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 KA+ FL +G K K++++FRGRE+ HQ++G ELL I+ E ++ PK EGRQ+ M Sbjct: 117 KALVRFLENGDKAKVTLRFRGREMAHQEIGIELLRRIEADLAEWGSVEQFPKMEGRQLTM 176 Query: 130 ILSSK 134 +L+ K Sbjct: 177 VLAPK 181 >gi|325067167|ref|ZP_08125840.1| translation initiation factor IF-3 [Actinomyces oris K20] Length = 142 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 73/121 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 K 121 + Sbjct: 140 R 140 >gi|218886085|ref|YP_002435406.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226707356|sp|B8DPN1|IF3_DESVM RecName: Full=Translation initiation factor IF-3 gi|218757039|gb|ACL07938.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 176 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 84/130 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ ++ P VC+++D + +Y QK EA+K Q IKE+K+RP D H Sbjct: 43 AKELGLDLVEVAATADPPVCRVMDYGRFKYEQQKKKAEAKKNQTVIQIKEIKVRPKTDDH 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K++ I F+ +G + K++V FRGREI+H+D G+ +L I E +I+++D E + E Sbjct: 103 DYDTKVRHIRRFIEEGDRCKVTVFFRGREIVHKDRGQSILDRIVEDTKDIAKMDQEARAE 162 Query: 124 GRQMIMILSS 133 GR + M+L+ Sbjct: 163 GRTLFMMLAP 172 >gi|149371735|ref|ZP_01891151.1| translation initiation factor IF-3 [unidentified eubacterium SCB49] gi|149355362|gb|EDM43922.1| translation initiation factor IF-3 [unidentified eubacterium SCB49] Length = 147 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 78/133 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 13 EMAEEQELDLVEISPNANPPVCKIMDYKKFVYEQKKREKVMKSKATKVIIKEIRFGPNTD 72 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K FL+DG K+K V F+GR I+++D G LL + + ++ +++ PK Sbjct: 73 DHDYEFKKKHAIKFLKDGAKLKAYVFFKGRSIIYKDQGEILLLKLAQELEDLGKVEQMPK 132 Query: 122 FEGRQMIMILSSK 134 EG++MIM ++ K Sbjct: 133 LEGKRMIMFIAPK 145 >gi|295115131|emb|CBL35978.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SM4/1] Length = 164 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLV+I + P VCKI+D K RY + EA+KKQK +KEV++ P ID Sbjct: 31 KLAREAELDLVKIAPTAKPPVCKIIDYGKFRYEQARKEKEAKKKQKVIEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A F+ G KVKI+++FRGRE+ H + +L + E+ +I+ +D K Sbjct: 91 DNDLNTKVSAARKFIEKGNKVKITLRFRGREMAHMSKTKYILDDFAEKLSDIAVVDKPSK 150 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 151 VEGRSIVMFLTAK 163 >gi|198275236|ref|ZP_03207767.1| hypothetical protein BACPLE_01395 [Bacteroides plebeius DSM 17135] gi|198271819|gb|EDY96089.1| hypothetical protein BACPLE_01395 [Bacteroides plebeius DSM 17135] Length = 193 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LKLAEEHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL + ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 LLEGKRMTISLSPK 172 >gi|323484404|ref|ZP_08089770.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14163] gi|323692415|ref|ZP_08106651.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14673] gi|323402182|gb|EGA94514.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14163] gi|323503555|gb|EGB19381.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14673] Length = 164 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LKLAKDAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A F+ G KVK++++FRGRE+ H + +L + E+ +I+ +D Sbjct: 90 DDNDLNTKINAARKFIEKGNKVKVTLRFRGREMAHMFKSKYILDDFAEKLADIATVDKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR +++ L++K Sbjct: 150 KVEGRSIVLFLTAK 163 >gi|281357060|ref|ZP_06243550.1| translation initiation factor IF-3 [Victivallis vadensis ATCC BAA-548] gi|281316618|gb|EFB00642.1| translation initiation factor IF-3 [Victivallis vadensis ATCC BAA-548] Length = 167 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 76/133 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MAQ+ +DLV + TP V +I++ KL+Y +KN RK Q + +KEVK ID Sbjct: 33 EMAQDYGMDLVLVSDRATPPVVRIMNFGKLQYEQKKNLKAQRKNQAAQKLKEVKFHVNID 92 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + KLK FL GC++K+++ RGRE+ HQDL +L+ + E + D +PK Sbjct: 93 DHDYETKLKHALDFLEKGCRLKVTLALRGREMAHQDLAYKLMDQVMEALAPAADADGKPK 152 Query: 122 FEGRQMIMILSSK 134 GR + + + K Sbjct: 153 MLGRNISVNFAPK 165 >gi|237747668|ref|ZP_04578148.1| translation initiation factor IF-3 [Oxalobacter formigenes OXCC13] gi|229379030|gb|EEO29121.1| translation initiation factor IF-3 [Oxalobacter formigenes OXCC13] Length = 112 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 72/109 (66%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y QK A EA+ KQK +KE+K RP D D +KL+ + FL DG K K++ Sbjct: 1 MDYGKFKYAEQKKAHEAKLKQKVVSVKEIKFRPGTDEGDYNIKLRNLIKFLEDGDKCKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQD+G +L +K+ ++ +++ PK EGRQM+M+L+ K Sbjct: 61 LRFRGREMAHQDIGFRMLERLKQDLDDVGQVEQFPKMEGRQMVMVLAPK 109 >gi|160915882|ref|ZP_02078090.1| hypothetical protein EUBDOL_01905 [Eubacterium dolichum DSM 3991] gi|158432358|gb|EDP10647.1| hypothetical protein EUBDOL_01905 [Eubacterium dolichum DSM 3991] Length = 192 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + +LDL+ + TP VCK+L+ K R+ QK A EA++ Q+ T +K +++ PVI Sbjct: 57 LEIAYDQDLDLLCVAPKATPPVCKVLNYGKHRFEQQKKAKEAKRNQQVTEVKPIRLSPVI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ ++ +P Sbjct: 117 DKHDFDTKMRHARKWVEDGMKVKVDMRFRGRLITRLEVGKKIMNSFIEEISDIANVEKKP 176 Query: 121 KFEGRQMIMILSSK 134 EG M +L+ K Sbjct: 177 ILEGNTMSCVLAPK 190 >gi|160889628|ref|ZP_02070631.1| hypothetical protein BACUNI_02054 [Bacteroides uniformis ATCC 8492] gi|270293970|ref|ZP_06200172.1| translation initiation factor IF-3 [Bacteroides sp. D20] gi|317479177|ref|ZP_07938314.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36] gi|156860620|gb|EDO54051.1| hypothetical protein BACUNI_02054 [Bacteroides uniformis ATCC 8492] gi|270275437|gb|EFA21297.1| translation initiation factor IF-3 [Bacteroides sp. D20] gi|316904665|gb|EFV26482.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36] Length = 200 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + LS K V Sbjct: 159 VLEGKRMTIQLSPKKV 174 >gi|313146206|ref|ZP_07808399.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] gi|313134973|gb|EFR52333.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] Length = 198 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 34 LKLAEEKEMDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 94 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 153 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 154 ILEGKRMTIQLSPK 167 >gi|255008478|ref|ZP_05280604.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] Length = 203 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKEMDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|294791033|ref|ZP_06756191.1| translation initiation factor IF-3 [Scardovia inopinata F0304] gi|294458930|gb|EFG27283.1| translation initiation factor IF-3 [Scardovia inopinata F0304] Length = 259 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A +AR+ Q + +KE + R I Sbjct: 20 LNLAREANLDLVEVSAHAKPPVAKLIDYGKYKYNEKIKARQARRNQSTAEVKETRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+S+ RGRE G ELL + + E ++ P Sbjct: 80 DDHDFEVKKNQVSRFLEGGDKVKVSIMLRGREQSRPVGGIELLQRLADEVEEFGSVESAP 139 Query: 121 KFEGRQMIMILSSK 134 + +GR +IM+L+ K Sbjct: 140 RRDGRNIIMVLAPK 153 >gi|225873842|ref|YP_002755301.1| translation initiation factor IF-3 [Acidobacterium capsulatum ATCC 51196] gi|225794043|gb|ACO34133.1| translation initiation factor IF-3 [Acidobacterium capsulatum ATCC 51196] Length = 174 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLVEI + TP VC+I D K Y K+ RKKQK IKEVK + Sbjct: 20 LKIARERSLDLVEISPNATPPVCRIQDYGKFLYEKDKSDRATRKKQKIITIKEVKFSVTV 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL +G KVK S++F+GR++ H+DLG +++ + + G+ ++ P Sbjct: 80 DEHDYQTKKNQAVRFLNEGDKVKASLRFKGRQMAHRDLGYNIINRLIQDIGDAGTVEFMP 139 Query: 121 KFEGRQMIMILSS 133 + EG + IL+ Sbjct: 140 RMEGTTLHAILAP 152 >gi|229820871|ref|YP_002882397.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM 12333] gi|229566784|gb|ACQ80635.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM 12333] Length = 192 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P V K++D K +Y A +AR+ Q +T +KE++ R I Sbjct: 23 LRLAEEADLDLVEVAPDARPPVAKLMDFGKFKYESAMKARDARRNQANTVLKEIRFRLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 83 DPHDYGTKKGHVERFLTAGDKVKVMIMFRGREQSRPEMGMRLLQRLADDVAELGHVESTP 142 Query: 121 KFEGRQMIMILSS 133 + +GR M M+++ Sbjct: 143 RLDGRNMTMVIAP 155 >gi|169349799|ref|ZP_02866737.1| hypothetical protein CLOSPI_00537 [Clostridium spiroforme DSM 1552] gi|169293367|gb|EDS75500.1| hypothetical protein CLOSPI_00537 [Clostridium spiroforme DSM 1552] Length = 184 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV + + P VC+I+D K R+ QK A E ++ K +KE ++ I Sbjct: 49 IDIAYNEGLDLVCVAPNAKPPVCRIMDFGKYRFEQQKKAKEMKRNSKVVAVKETQLSVTI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L +G KVK++++FRGR++ H DLG++++ + E+ +I+ Sbjct: 109 DVHDKNVKLKRTLKWLEEGNKVKVAIRFRGRQLAHMDLGKKVIDDFVAECAEVGQIEKPA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR + I++ K Sbjct: 169 KLEGRTLTAIIAPK 182 >gi|296122748|ref|YP_003630526.1| translation initiation factor IF-3 [Planctomyces limnophilus DSM 3776] gi|296015088|gb|ADG68327.1| translation initiation factor IF-3 [Planctomyces limnophilus DSM 3776] Length = 145 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E +DLVE+ P VC+I+D K +Y QK KQ IKE+++RP Sbjct: 11 MRVALEVGMDLVEVAPGERPPVCRIMDYGKFKYE-QKKKHANSAKQHQVQIKEIRLRPKT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KVK+++ FRGRE H D G+E+L+NI ++ E +++ P Sbjct: 70 GEHDIEFKVKQAKEFLSQKDKVKLNIIFRGRENAHHDRGKEILANIIQQLAEHCKVEQMP 129 Query: 121 KFE-GRQMIMILSSKC 135 K E GR MI +L+ K Sbjct: 130 KLEGGRNMIAVLAPKT 145 >gi|291550174|emb|CBL26436.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus torques L2-14] Length = 164 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K +Y + EA+KKQK+ IKEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPGAKPPVCKIIDYGKYKYEQTRKEKEAKKKQKTVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + ++ +++ ++ Sbjct: 90 DTNDLNTKMNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAKQLEDVATVEKAA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRNMSMVLAEK 163 >gi|291087590|ref|ZP_06346860.2| translation initiation factor IF-3 [Clostridium sp. M62/1] gi|291074603|gb|EFE11967.1| translation initiation factor IF-3 [Clostridium sp. M62/1] Length = 200 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLV+I + P VCKI+D K RY + EA+KKQK +KEV++ P ID Sbjct: 67 KLAREAELDLVKIAPTAKPPVCKIIDYGKFRYEQARKEKEAKKKQKVIEVKEVRLSPNID 126 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A F+ G KVKI+++FRGRE+ H + +L + E+ +I+ +D K Sbjct: 127 DNDLNTKVSAARKFIEKGNKVKITLRFRGREMAHMSKTKYILDDFAEKLSDIAVVDKPSK 186 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 187 VEGRSIVMFLTAK 199 >gi|77164650|ref|YP_343175.1| initiation factor 3 [Nitrosococcus oceani ATCC 19707] gi|254434829|ref|ZP_05048337.1| translation initiation factor IF-3 [Nitrosococcus oceani AFC27] gi|76882964|gb|ABA57645.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosococcus oceani ATCC 19707] gi|207091162|gb|EDZ68433.1| translation initiation factor IF-3 [Nitrosococcus oceani AFC27] Length = 152 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA DLVEI P VC+I+D K + K A+KKQK IKEVK RP Sbjct: 18 LHVADEAGEDLVEIAPQAEPPVCRIMDYGKYLFEENKKRQAAKKKQKQIQIKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG +LL ++ E ++ P Sbjct: 78 EEGDYQVKLRNLVRFLTEGDKTKVSLRFRGRELAHQELGLKLLERVRNDLEEYGVVEQHP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 KREGRQMVMVLAPK 151 >gi|254796674|ref|YP_003081510.1| translation initiation factor IF-3 [Neorickettsia risticii str. Illinois] gi|254589919|gb|ACT69281.1| translation initiation factor IF-3 [Neorickettsia risticii str. Illinois] Length = 155 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ NLDLVE+ S+V P +CKILD K +Y +K + R+KQKS+ +KEV++R I Sbjct: 18 LQLAKSRNLDLVEVSSAVVPPICKILDYGKYKYEAKKESNLKRRKQKSSTVKEVQLRQSI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRIDCE 119 DL KLK I FL++ KVK+ V+ RGRE+ +++L LL+ + E G E+ +++ E Sbjct: 78 GAGDLSTKLKKIREFLQEEDKVKVVVRLRGREMTNKNLAINLLNKVVEEVGSEVGKLEKE 137 Query: 120 PKFEGRQMIMILSSKC 135 +IL+ Sbjct: 138 VVQNNNNFFIILAPNA 153 >gi|86147529|ref|ZP_01065840.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio sp. MED222] gi|218709222|ref|YP_002416843.1| translation initiation factor IF-3 [Vibrio splendidus LGP32] gi|85834697|gb|EAQ52844.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio sp. MED222] gi|218322241|emb|CAV18359.1| Translation initiation factor IF-3 [Vibrio splendidus LGP32] Length = 156 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQEIGVDVLNRLKVDTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 147 MIMVLAPK 154 >gi|295395436|ref|ZP_06805635.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC 49030] gi|294971758|gb|EFG47634.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC 49030] Length = 245 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 79/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ A+LDLVE+ P V K++D K +Y + A EARK Q + +KE++ R I Sbjct: 70 LDLARSADLDLVEVAPQAKPPVVKLMDYGKFKYESAQKAREARKNQANMALKEIRFRLKI 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G +LL+ + + ++ ++ P Sbjct: 130 DDHDYETKKGHVSRFLSGGDKVKVMIMFRGREQSRPEMGMKLLNKLADEVADLGTVESAP 189 Query: 121 KFEGRQMIMILS 132 + +GR M+M+++ Sbjct: 190 RVDGRNMVMVIA 201 >gi|308186647|ref|YP_003930778.1| Translation initiation factor IF-3 [Pantoea vagans C9-1] gi|308057157|gb|ADO09329.1| Translation initiation factor IF-3 [Pantoea vagans C9-1] Length = 160 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 90/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 20 LEKAEEAGGDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 80 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 139 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 140 SFPSKIEGRQMIMVLAPK 157 >gi|88608274|ref|YP_506184.1| translation initiation factor IF-3 [Neorickettsia sennetsu str. Miyayama] gi|88600443|gb|ABD45911.1| translation initiation factor IF-3 [Neorickettsia sennetsu str. Miyayama] Length = 189 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ NLDLVE+ S+V P +CKILD K +Y +K + R+KQKS+ IKEV++R I Sbjct: 52 LQLAKSRNLDLVEVSSAVFPPICKILDYGKYKYEAKKESNLKRRKQKSSTIKEVQLRQSI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRIDCE 119 DL KLK I FL++ KVK+ V+ RGRE+ +++L LL+ + E G E+ +++ E Sbjct: 112 GAGDLSTKLKKIREFLQEEDKVKVVVRLRGREMTNKNLAINLLNKVVEEVGSEVGKLEKE 171 Query: 120 PKFEGRQMIMILSSKC 135 +IL+ Sbjct: 172 IVQNNNNFFIILAPNA 187 >gi|326792021|ref|YP_004309842.1| translation initiation factor IF-3 [Clostridium lentocellum DSM 5427] gi|326542785|gb|ADZ84644.1| Translation initiation factor IF-3 [Clostridium lentocellum DSM 5427] Length = 170 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA E NLDLV+I P VCKI+D K ++ K EARKKQK +KEV++ I+ Sbjct: 38 KMAAEKNLDLVKIAPQAKPPVCKIMDYGKYKFDAAKKEKEARKKQKVVSVKEVRLSASIE 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+ G KVKISV FRGRE+MH G ELL E+ + +PK Sbjct: 98 KHDFETKMKNAAKFLKAGDKVKISVVFRGREMMHTHRGNELLEQAIALVEEVGVAEQKPK 157 Query: 122 FEGRQMIMILSSK 134 EGR M+++++ K Sbjct: 158 LEGRAMVIVVAPK 170 >gi|253989347|ref|YP_003040703.1| translation initiation factor if-3 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780797|emb|CAQ83959.1| translation initiation factor if-3 [Photorhabdus asymbiotica] Length = 131 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D D QV Sbjct: 2 GVDLVEISPNAEPPVCRIMDYGKFLYEKSKSIKEQKKKQKVIQVKEIKFRPGTDEGDYQV 61 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E++ ++ P K EGRQ Sbjct: 62 KLRNLVRFLEDGDKAKITLRFRGREMAHQQIGVEMLNRIRDDLDELAVVESFPSKIEGRQ 121 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 122 MIMVLAPK 129 >gi|304397617|ref|ZP_07379494.1| translation initiation factor IF-3 [Pantoea sp. aB] gi|304354789|gb|EFM19159.1| translation initiation factor IF-3 [Pantoea sp. aB] Length = 155 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 90/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGGDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 75 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 134 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 135 SFPSKIEGRQMIMVLAPK 152 >gi|291617248|ref|YP_003519990.1| InfC [Pantoea ananatis LMG 20103] gi|291152278|gb|ADD76862.1| InfC [Pantoea ananatis LMG 20103] gi|327393702|dbj|BAK11124.1| translation initiation factor IF-3 InfC [Pantoea ananatis AJ13355] Length = 160 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 91/138 (65%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 20 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL +G K KI+++FRGRE+ HQ +G E+L+ +++ E ++ ++ Sbjct: 80 DDGDYQVKLRNLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 139 Query: 118 CEP-KFEGRQMIMILSSK 134 P K EGRQMIM+L+ K Sbjct: 140 SFPSKIEGRQMIMVLAPK 157 >gi|91215265|ref|ZP_01252237.1| translation initiation factor IF-3 [Psychroflexus torquis ATCC 700755] gi|91186870|gb|EAS73241.1| translation initiation factor IF-3 [Psychroflexus torquis ATCC 700755] Length = 148 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI P VCK++D +K Y +K + K +KE++ P Sbjct: 12 LAMAEEQELDLVEISPKADPPVCKVMDYKKFLYEQKKREKVLKAKTTQVVVKEIRFGPNT 71 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL+DG K+K V F+GR I+ +D G+ LL + + ++++++ P Sbjct: 72 DDHDYEFKKKNAEKFLKDGAKLKAFVFFKGRSIVFKDKGQILLLRLAQDLEDLAKVEQMP 131 Query: 121 KFEGRQMIMILSS 133 K EG++MIMIL+ Sbjct: 132 KLEGKRMIMILAP 144 >gi|257462306|ref|ZP_05626721.1| protein translation initiation factor 3 [Fusobacterium sp. D12] Length = 170 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 37 LEIAAGQDLDLVEIAANAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTIVKEVKVTARI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL K+ I FL KVK+++ GRE MH LG L I E+F + D + Sbjct: 97 DVHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEIAEKFS--ANADVDK 154 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 155 KYAEKQKHIILTPK 168 >gi|153808044|ref|ZP_01960712.1| hypothetical protein BACCAC_02330 [Bacteroides caccae ATCC 43185] gi|149129653|gb|EDM20867.1| hypothetical protein BACCAC_02330 [Bacteroides caccae ATCC 43185] Length = 200 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+++D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKELDLVEISPNAQPPVCRVIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|225351394|ref|ZP_03742417.1| hypothetical protein BIFPSEUDO_02988 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157738|gb|EEG71021.1| hypothetical protein BIFPSEUDO_02988 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 232 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|281420276|ref|ZP_06251275.1| translation initiation factor IF-3 [Prevotella copri DSM 18205] gi|281405771|gb|EFB36451.1| translation initiation factor IF-3 [Prevotella copri DSM 18205] Length = 228 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVEI + P VC+I+D K Y +K+A E ++KQ KE++ P Sbjct: 38 LELARQQELDLVEISPNAQPPVCRIVDYSKFLYQQKKHAKEMKQKQVKVETKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAMEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + +S K Sbjct: 158 KLEGKKMFLYMSPK 171 >gi|303237190|ref|ZP_07323760.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN] gi|302482577|gb|EFL45602.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN] Length = 228 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LDIARKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL DG KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYQFKLKHAQEFLNDGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPK 171 >gi|220912249|ref|YP_002487558.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus A6] gi|219859127|gb|ACL39469.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus A6] Length = 356 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 46 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL + E+ ++ P Sbjct: 106 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFADDVAEVGVVESSP 165 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 166 RIDGRNMVMVVGP 178 >gi|282859091|ref|ZP_06268222.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010] gi|282588121|gb|EFB93295.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010] Length = 227 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LELAQHEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL +G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPK 171 >gi|223936228|ref|ZP_03628141.1| translation initiation factor IF-3 [bacterium Ellin514] gi|223895090|gb|EEF61538.1| translation initiation factor IF-3 [bacterium Ellin514] Length = 198 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + TP VC+++D K RY K E++K Q + +KE+++ P I Sbjct: 20 LNMARANTVDLVEIAPNATPPVCRLVDFGKFRYEQAKKDKESKKHQHANKVKEIQLSPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKL FL + KVK+ +KFRGRE+ H + G +L++ + + D P Sbjct: 80 DPHDFGVKLNHAVDFLCEDMKVKVVLKFRGREMAHTEYGFQLINKMIKEVTPYGHPDANP 139 Query: 121 KFEGRQMIMILSS 133 K G+ + ++LS Sbjct: 140 KLIGKAINLMLSP 152 >gi|119026094|ref|YP_909939.1| translation initiation factor IF-3 [Bifidobacterium adolescentis ATCC 15703] gi|118765678|dbj|BAF39857.1| translation initiation factor If-3 [Bifidobacterium adolescentis ATCC 15703] Length = 306 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 115 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 174 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 175 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 234 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 235 KQEGRNIIMTLAPK 248 >gi|305664644|ref|YP_003860931.1| translation initiation factor IF-3 [Maribacter sp. HTCC2170] gi|88707345|gb|EAQ99591.1| translation initiation factor IF-3 [Maribacter sp. HTCC2170] Length = 152 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E LDLVEI P VCKI+D +K Y +K + K +KE++ P Sbjct: 16 MAKAEEIGLDLVEISPKADPPVCKIIDYKKFLYEQKKREKIMKAKASKVVVKEIRFGPNT 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K K + FL+DG K+K V F+GR I+++D G LL + E+ +++ P Sbjct: 76 DDHDYQFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLKLASELEELGKVEQMP 135 Query: 121 KFEGRQMIMILSSKC 135 K EG++M M ++ K Sbjct: 136 KLEGKRMTMFIAPKT 150 >gi|269218567|ref|ZP_06162421.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 848 str. F0332] gi|269211678|gb|EEZ78018.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 848 str. F0332] Length = 204 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P V K++D K +Y + EAR+ Q +T IK +++ I Sbjct: 23 LRLAQEAGLDLVEVAPNSNPPVAKLMDYGKFKYESAQKVREARRNQSNTVIKSIRIGLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL G KVK ++F+GRE ++G LL + E E+S I+ P Sbjct: 83 DENDYRTKKSQAERFLTGGDKVKFDLRFKGREQSRPEMGVRLLRGLAEELAELSTIEAAP 142 Query: 121 KFEGRQMIMILS 132 + EGR M M+L+ Sbjct: 143 RAEGRNMSMVLA 154 >gi|116670038|ref|YP_830971.1| translation initiation factor 3 [Arthrobacter sp. FB24] gi|116610147|gb|ABK02871.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter sp. FB24] Length = 396 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 57 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL + E+ ++ P Sbjct: 117 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFADDVAEVGVVESSP 176 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 177 RIDGRNMVMVVGP 189 >gi|224282677|ref|ZP_03645999.1| translation initiation factor IF-3 [Bifidobacterium bifidum NCIMB 41171] gi|310287136|ref|YP_003938394.1| infC Bacterial protein translation Initiation Factor 3 [Bifidobacterium bifidum S17] gi|311063999|ref|YP_003970724.1| protein translation initiation factor 3 (IF-3) InfC [Bifidobacterium bifidum PRL2010] gi|309251072|gb|ADO52820.1| infC Bacterial Protein Translation Initiation Factor 3 [Bifidobacterium bifidum S17] gi|310866318|gb|ADP35687.1| InfC Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bifidobacterium bifidum PRL2010] Length = 231 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAADVEEYGTVESRP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|313139835|ref|ZP_07802028.1| translation initiation factor If-3 [Bifidobacterium bifidum NCIMB 41171] gi|313132345|gb|EFR49962.1| translation initiation factor If-3 [Bifidobacterium bifidum NCIMB 41171] Length = 248 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 58 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 118 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAADVEEYGTVESRP 177 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 178 KQEGRNIIMTLAPK 191 >gi|56460506|ref|YP_155787.1| translation initiation factor IF-3 [Idiomarina loihiensis L2TR] gi|61213072|sp|Q5QYN5|IF3_IDILO RecName: Full=Translation initiation factor IF-3 gi|56179516|gb|AAV82238.1| Translation initiation factor 3 [Idiomarina loihiensis L2TR] Length = 181 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVE+ + P VC+++D K + K E +KKQK +KEVK RP Sbjct: 45 LDAAAEAGVDLVEMSPNAEPPVCRLMDYGKFLFEKSKEQKEQKKKQKQIQVKEVKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQ+LG ELL+ +K EIS ++ P Sbjct: 105 DEGDYQVKLRNLRRFLEGGDKTKVTIRFRGREMAHQELGIELLNRVKNDLEEISIVESFP 164 Query: 121 -KFEGRQMIMILS 132 + EGRQMIM+L+ Sbjct: 165 RRAEGRQMIMVLA 177 >gi|116620544|ref|YP_822700.1| translation initiation factor 3 [Candidatus Solibacter usitatus Ellin6076] gi|122256227|sp|Q02D92|IF3_SOLUE RecName: Full=Translation initiation factor IF-3 gi|116223706|gb|ABJ82415.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Solibacter usitatus Ellin6076] Length = 213 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 74/133 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLV I + P V K +D +Y ++K +ARKKQ +KE+K RP Sbjct: 45 LRKAQELGLDLVLIAPTAVPPVAKAVDFGHYQYDLKKKQHDARKKQHVVQVKELKFRPNT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K FL++G +VK V+FRGREI H DLG++LL ++ P Sbjct: 105 DDHDYDFKKKHAIRFLQEGNRVKAVVQFRGREIAHADLGKKLLMRFAADLTAYGTVEGMP 164 Query: 121 KFEGRQMIMILSS 133 + EGR +++S Sbjct: 165 RLEGRNAHVLISP 177 >gi|84393194|ref|ZP_00991957.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio splendidus 12B01] gi|84376160|gb|EAP93045.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio splendidus 12B01] Length = 156 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQEIGVDVLNRLKIDTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 147 MIMVLAPK 154 >gi|237739650|ref|ZP_04570131.1| translation initiation factor IF-3 [Fusobacterium sp. 2_1_31] gi|229423258|gb|EEO38305.1| translation initiation factor IF-3 [Fusobacterium sp. 2_1_31] Length = 180 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI P VCKI+D K +Y + EA+K QK +KE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPGANPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVVKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL ++ FL KVKI++ GRE MH +LG L I E+F E + + E Sbjct: 106 DSHDLETKLNQVNKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEV--EK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPK 177 >gi|317059973|ref|ZP_07924458.1| translation initiation factor IF-3 [Fusobacterium sp. D12] gi|313685649|gb|EFS22484.1| translation initiation factor IF-3 [Fusobacterium sp. D12] Length = 179 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 46 LEIAAGQDLDLVEIAANAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTIVKEVKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL K+ I FL KVK+++ GRE MH LG L I E+F + D + Sbjct: 106 DVHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEIAEKFS--ANADVDK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +IL+ K Sbjct: 164 KYAEKQKHIILTPK 177 >gi|153835372|ref|ZP_01988039.1| translation initiation factor IF-3 [Vibrio harveyi HY01] gi|148868120|gb|EDL67284.1| translation initiation factor IF-3 [Vibrio harveyi HY01] Length = 166 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE E + ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVEFAVVESFPSKIEGRQ 156 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 157 MIMVLAPK 164 >gi|311115050|ref|YP_003986271.1| translation initiation factor IF3 [Gardnerella vaginalis ATCC 14019] gi|310946544|gb|ADP39248.1| translation initiation factor IF3 [Gardnerella vaginalis ATCC 14019] Length = 244 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 48 LNLAKEANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E I+ P Sbjct: 108 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPIGGVELLRRLADEVSESGTIEFAP 167 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 168 KQEGRNIIMTLAPK 181 >gi|312866032|ref|ZP_07726253.1| translation initiation factor IF-3 [Streptococcus downei F0415] gi|311098436|gb|EFQ56659.1| translation initiation factor IF-3 [Streptococcus downei F0415] Length = 162 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 84/131 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ + +KE+++ PVID Sbjct: 19 VADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSTVTVKEIRLSPVIDK 78 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL+ G KVK+S++FRGR I H+D+G ++L++ E +I+ I+ K Sbjct: 79 GDFETKLRNGRKFLQKGNKVKVSIRFRGRMITHKDIGAQVLADFAEATQDIAIIEQRAKM 138 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 139 DGRQMFMQLAP 149 >gi|218245669|ref|YP_002371040.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801] gi|257058715|ref|YP_003136603.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802] gi|226707355|sp|B7JYL4|IF3_CYAP8 RecName: Full=Translation initiation factor IF-3 gi|218166147|gb|ACK64884.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801] gi|256588881|gb|ACU99767.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802] Length = 176 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LSLAQEKELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D V++ FL+ G KVK +V FRGREI H +L +ELL + + E++ I P Sbjct: 102 GESDYNVRVNQAKRFLKSGDKVKATVTFRGREIQHANLAQELLERMAKDLEELAEIQQAP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 162 KREGRNMMMFLTPK 175 >gi|218283436|ref|ZP_03489444.1| hypothetical protein EUBIFOR_02033 [Eubacterium biforme DSM 3989] gi|218215865|gb|EEC89403.1| hypothetical protein EUBIFOR_02033 [Eubacterium biforme DSM 3989] Length = 199 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + NLDL+ + P+VCK+LD + + QK A EA++KQ +K +++ P+I Sbjct: 64 LDIAYKQNLDLLCVAPKARPAVCKVLDYGRYHFEQQKKAKEAKRKQHVVEVKSLRLSPII 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ ++ G KVKI ++FRGR I ++GR+++++ E E++ ++ +P Sbjct: 124 DTHDFETKVRQTSKWIEAGMKVKIDMRFRGRLITRLEVGRKIMNDFIEAMSEVAIVEKKP 183 Query: 121 KFEGRQMIMILSSK 134 EG M +L+ K Sbjct: 184 SMEGNTMSTVLAPK 197 >gi|210623616|ref|ZP_03293942.1| hypothetical protein CLOHIR_01892 [Clostridium hiranonis DSM 13275] gi|210153486|gb|EEA84492.1| hypothetical protein CLOHIR_01892 [Clostridium hiranonis DSM 13275] Length = 141 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A NLDLV I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 9 LANNKNLDLVLISPNAKPPVCKIMDYGKYRYEQARKEKEAKKKQKTVNVKEVRLRPGIEQ 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K K FL G KVK+ ++FRGRE+ H+DLG++++ E E P F Sbjct: 69 NDLNTKAKQAMKFLSKGDKVKVELRFRGRELGHKDLGKDVMLKFIEAVKEFGEPAKAPTF 128 Query: 123 EGRQMIMILSSK 134 EG M++I+ K Sbjct: 129 EGNNMVVIIDPK 140 >gi|332878706|ref|ZP_08446423.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683343|gb|EGJ56223.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 159 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 22 LEIAEELELDLVEISPNATPPVCKVIDYKKFLYEQKKRDKEMKAKATKVVIKEIRFGPQT 81 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 82 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 141 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 142 KLEGKRMTMFLAP 154 >gi|325287304|ref|YP_004263094.1| translation initiation factor IF-3 [Cellulophaga lytica DSM 7489] gi|324322758|gb|ADY30223.1| translation initiation factor IF-3 [Cellulophaga lytica DSM 7489] Length = 139 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 75/132 (56%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI P VCKI+D +K Y +K + K +KE++ P D H Sbjct: 6 AEELELDLVEISPKADPPVCKIIDYKKFLYEQKKREKVMKAKASKVVVKEIRFGPQTDDH 65 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D + K K + FL+DG K+K V F+GR I+++D G LL + + E+ +++ PK E Sbjct: 66 DYEFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLRLAQELEELGKVEQMPKLE 125 Query: 124 GRQMIMILSSKC 135 G++M M L+ K Sbjct: 126 GKRMTMFLAPKT 137 >gi|33152810|ref|NP_874163.1| translation initiation factor IF-3 [Haemophilus ducreyi 35000HP] gi|39931235|sp|Q7VKS0|IF3_HAEDU RecName: Full=Translation initiation factor IF-3 gi|33149034|gb|AAP96552.1| translation initiation factor IF-3 [Haemophilus ducreyi 35000HP] Length = 192 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 56 LSRAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ I FL DG KVKI+V++RGRE+ HQ++G ++L +K E++ ++ P Sbjct: 116 DEGDYQIKLRNILRFLEDGDKVKITVRYRGREMAHQEIGLDVLERVKTDTSEVAIVESAP 175 Query: 121 -KFEGRQMIMILSSK 134 K EGRQ +M+++ K Sbjct: 176 GKLEGRQAVMVIAPK 190 >gi|42523122|ref|NP_968502.1| translation initiation factor IF-3 [Bdellovibrio bacteriovorus HD100] gi|39575327|emb|CAE79495.1| translation initiation factor IF-3 [Bdellovibrio bacteriovorus HD100] Length = 178 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDL+EI + TP CKI+D K +Y +K A ARKKQ IKE++MRP Sbjct: 11 LRIAEDRGLDLLEIAPTATPPTCKIMDYGKWKYENKKKATAARKKQTVVTIKEIQMRPRT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL +G KVK+S++F GRE+ HQ+LG +++ +++ ++ +P Sbjct: 71 DQHDFETKMNHARRFLLEGDKVKVSLRFMGREMAHQELGMDVMKKCIAFVDDLALVESQP 130 Query: 121 KFEGRQMIMILSS 133 K EG+ M ++L Sbjct: 131 KMEGKNMFLMLGP 143 >gi|329961278|ref|ZP_08299444.1| translation initiation factor IF-3 [Bacteroides fluxus YIT 12057] gi|328531943|gb|EGF58760.1| translation initiation factor IF-3 [Bacteroides fluxus YIT 12057] Length = 200 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNAEPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|218130016|ref|ZP_03458820.1| hypothetical protein BACEGG_01599 [Bacteroides eggerthii DSM 20697] gi|217987819|gb|EEC54145.1| hypothetical protein BACEGG_01599 [Bacteroides eggerthii DSM 20697] Length = 200 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 74/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|319902629|ref|YP_004162357.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides helcogenes P 36-108] gi|319417660|gb|ADV44771.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides helcogenes P 36-108] Length = 204 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNADPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|315651590|ref|ZP_07904607.1| translation initiation factor IF3 [Eubacterium saburreum DSM 3986] gi|315486149|gb|EFU76514.1| translation initiation factor IF3 [Eubacterium saburreum DSM 3986] Length = 165 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLV I + P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AEEAGLDLVLIAPTAKPPVCKIIDYGKFRYELARKDKEAKKKQKTIEIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ + FL G KVK++++FRGRE+ + +L + E +++ ID K E Sbjct: 93 DLNTKVGSARKFLEKGNKVKVTLRFRGREMARMFKSKYILDDFAEALSDVATIDKPSKAE 152 Query: 124 GRQMIMILSSK 134 GR ++M LS+K Sbjct: 153 GRSLVMFLSAK 163 >gi|258647089|ref|ZP_05734558.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259] gi|260853036|gb|EEX72905.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259] Length = 214 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ LDLVEI + P VC+I+D K Y +K+ E + KQ +KE++ P Sbjct: 39 LQLAEQKGLDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKELKAKQVKIEVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KVK V FRGR I+ ++ G LL E +++ P Sbjct: 99 DEHDYDFKLKHAKEFLSDGNKVKAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++MI+ L+ K Sbjct: 159 VLEGKRMIIFLTPK 172 >gi|224539836|ref|ZP_03680375.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus DSM 14838] gi|224518546|gb|EEF87651.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus DSM 14838] Length = 198 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEREVDLVEISPNAQPPVCRIVDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPK 172 >gi|149191775|ref|ZP_01870013.1| initiation factor IF3 [Vibrio shilonii AK1] gi|148834355|gb|EDL51354.1| initiation factor IF3 [Vibrio shilonii AK1] Length = 129 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG KVK++++FRGRE+ HQD+G ++L+ +KE +++ ++ P + EGRQM Sbjct: 61 LRNLTRFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVDLAVVESFPTRIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|212715579|ref|ZP_03323707.1| hypothetical protein BIFCAT_00478 [Bifidobacterium catenulatum DSM 16992] gi|212660946|gb|EEB21521.1| hypothetical protein BIFCAT_00478 [Bifidobacterium catenulatum DSM 16992] Length = 232 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAGEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|322437116|ref|YP_004219328.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX9] gi|321164843|gb|ADW70548.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX9] Length = 193 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVEI + P VCKI D K Y K+ ARKKQK IKEVK + Sbjct: 7 LKMAREKSLDLVEISPNAVPPVCKIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K FL DG KVK S++F+GR++ H+DLG ++++ + G+ ++ P Sbjct: 67 DEHDYVTKKNMAVRFLHDGDKVKASLRFKGRQMAHRDLGYKIINRLILDIGDAGLVEFMP 126 Query: 121 KFEGRQMIMILS 132 + EG + IL+ Sbjct: 127 RMEGTTLHAILA 138 >gi|256819830|ref|YP_003141109.1| translation initiation factor IF-3 [Capnocytophaga ochracea DSM 7271] gi|315225229|ref|ZP_07867046.1| translation initiation factor IF3 [Capnocytophaga ochracea F0287] gi|256581413|gb|ACU92548.1| translation initiation factor IF-3 [Capnocytophaga ochracea DSM 7271] gi|314944912|gb|EFS96944.1| translation initiation factor IF3 [Capnocytophaga ochracea F0287] Length = 156 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 19 LEIANELELDLVEISPNATPPVCKVIDYKKFLYEQKKREKEMKAKATKVVIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 139 KLEGKRMTMFLAP 151 >gi|307244251|ref|ZP_07526366.1| translation initiation factor IF-3 [Peptostreptococcus stomatis DSM 17678] gi|306492401|gb|EFM64439.1| translation initiation factor IF-3 [Peptostreptococcus stomatis DSM 17678] Length = 152 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDL I + P VCKI+D K +Y + EA+KKQK +KEV++RP I Sbjct: 19 ELASSKNLDLAMISPNAKPPVCKIMDYGKYKYEQARKEKEAKKKQKVINVKEVRLRPGIG 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ + E + PK Sbjct: 79 DHDLNTKANQAAKFLQKGDKVKVELRFRGRELGHKDIGKEVMLKFIDLLSEFGEPNKAPK 138 Query: 122 FEGRQMIMILSSK 134 FEG M+ I+ K Sbjct: 139 FEGNNMVAIIDPK 151 >gi|73748564|ref|YP_307803.1| translation initiation factor IF-3 [Dehalococcoides sp. CBDB1] gi|147669324|ref|YP_001214142.1| translation initiation factor 3 [Dehalococcoides sp. BAV1] gi|73660280|emb|CAI82887.1| translation initiation factor IF-3 [Dehalococcoides sp. CBDB1] gi|146270272|gb|ABQ17264.1| bacterial translation initiation factor 3 (bIF-3) [Dehalococcoides sp. BAV1] Length = 157 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 79/135 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ + P VC+++D K R+ K EA++ QK + +KE+++RP I Sbjct: 8 EQARKINLDLVEVAPTAVPPVCRLMDYGKYRFEQTKKDREAKRTQKVSLLKEIRVRPKIG 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ L G KVK++V FRGREI H +LG LL + + +I+ I+ +P Sbjct: 68 EHDFDAKARSARKQLESGDKVKLTVMFRGREITHAELGLRLLKKMADSLTDIATIEGQPS 127 Query: 122 FEGRQMIMILSSKCV 136 G +M + L K Sbjct: 128 LLGSRMHLTLLPKAA 142 >gi|261250894|ref|ZP_05943468.1| translation initiation factor 3 [Vibrio orientalis CIP 102891] gi|260937767|gb|EEX93755.1| translation initiation factor 3 [Vibrio orientalis CIP 102891] Length = 129 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/127 (46%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE E++ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTVELAVVESFPKKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|282890617|ref|ZP_06299140.1| hypothetical protein pah_c022o224 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499614|gb|EFB41910.1| hypothetical protein pah_c022o224 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 189 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 79/130 (60%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVEI +P VCKI++ K RY K E +K Q +KE+K++P ID + Sbjct: 34 AEEAGLDLVEIVPGSSPPVCKIMNYGKFRYDQTKREKENKKAQHQIRVKEIKIKPNIDEN 93 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL KL+ F++ G KVKI+ FRGRE+MH ++G +L+ + + EI+ + K Sbjct: 94 DLNTKLRHARDFIQKGNKVKITCTFRGREMMHPEIGEKLVQKLCDELDEIAIPEAPMKMF 153 Query: 124 GRQMIMILSS 133 GR + ++L+ Sbjct: 154 GRILNVVLAP 163 >gi|51596665|ref|YP_070856.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 32953] gi|149365659|ref|ZP_01887694.1| translation initiation factor IF-3 [Yersinia pestis CA88-4125] gi|153948799|ref|YP_001400690.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 31758] gi|218929521|ref|YP_002347396.1| translation initiation factor IF-3 [Yersinia pestis CO92] gi|257168076|ref|NP_669220.2| translation initiation factor IF-3 [Yersinia pestis KIM 10] gi|20138481|sp|Q8ZDW6|IF3_YERPE RecName: Full=Translation initiation factor IF-3 gi|61213095|sp|Q669Z1|IF3_YERPS RecName: Full=Translation initiation factor IF-3 gi|166918494|sp|A7FHG2|IF3_YERP3 RecName: Full=Translation initiation factor IF-3 gi|51589947|emb|CAH21579.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 32953] gi|115348132|emb|CAL21060.1| translation initiation factor IF-3 [Yersinia pestis CO92] gi|149292072|gb|EDM42146.1| translation initiation factor IF-3 [Yersinia pestis CA88-4125] gi|152960294|gb|ABS47755.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 31758] Length = 183 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 87/138 (63%), Gaps = 4/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E S + Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDSDLAVVE 162 Query: 121 KF----EGRQMIMILSSK 134 F EGRQMIM+L+ K Sbjct: 163 SFPTRIEGRQMIMVLAPK 180 >gi|325662120|ref|ZP_08150738.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085917|ref|ZP_08335000.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471569|gb|EGC74789.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406840|gb|EGG86345.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 164 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEAELDLVKIAPTAKPPVCKIIDYGKYKYELTRKEKEAKKKQKTVDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F++ G KVK++++FRGRE+ H + +L + + +I+ ++ Sbjct: 90 DTNDLNTKVNNAKKFIQKGNKVKVTLRFRGREMAHMQTSKHILDDFADMLKDIAVVEKPT 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 150 KLEGRSISMVLTEK 163 >gi|239637522|ref|ZP_04678494.1| translation initiation factor IF-3 [Staphylococcus warneri L37603] gi|239596740|gb|EEQ79265.1| translation initiation factor IF-3 [Staphylococcus warneri L37603] Length = 175 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVDLDLVIVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKTINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ L E +I+ I+ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRQLEKFAEECKDIATIEQKP 158 Query: 121 KFEGRQMIMILS 132 K EGRQM ++LS Sbjct: 159 KMEGRQMFLMLS 170 >gi|289548452|ref|YP_003473440.1| translation initiation factor IF-3 [Thermocrinis albus DSM 14484] gi|289182069|gb|ADC89313.1| translation initiation factor IF-3 [Thermocrinis albus DSM 14484] Length = 171 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 +++A+E LDLVE+ + P VCK+LD K Y ++K EARKKQ S +K++ M P Sbjct: 34 LKIAEERGLDLVEVAPNANPPVCKLLDYGKFLYELRKKEKEARKKQKEHSMEVKDIMMNP 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL DG KV++ ++FRGRE +H +LG L+ I E ++S+++ Sbjct: 94 RIDEHDLKVKLKHMREFLEDGDKVRVRIRFRGRENLHPELGDRLVQRILEELSDVSQLES 153 Query: 119 EPKFEGRQMIMILSSK 134 PK EG + L K Sbjct: 154 PPKKEGNFLSFALLPK 169 >gi|167758931|ref|ZP_02431058.1| hypothetical protein CLOSCI_01277 [Clostridium scindens ATCC 35704] gi|167663338|gb|EDS07468.1| hypothetical protein CLOSCI_01277 [Clostridium scindens ATCC 35704] Length = 164 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + + +++ ++ Sbjct: 90 ETNDLNTKVNNAKKFISKGNKVKVTLRFRGREMAHMQQSKHILDDFAKLLEDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|307718473|ref|YP_003874005.1| translation initiation factor IF-3 [Spirochaeta thermophila DSM 6192] gi|306532198|gb|ADN01732.1| translation initiation factor IF-3 [Spirochaeta thermophila DSM 6192] gi|315187011|gb|EFU20768.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta thermophila DSM 6578] Length = 172 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVE+ P VCKILD K ++ +K E +KKQK +KEV+M+P I Sbjct: 36 LRRAREKGLDLVEVAPQAKPPVCKILDYGKYKFEQEKKLKETKKKQKQNKLKEVRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K + I FL +G KVK++++FRGRE+ H ++GR +L I E + ++ P Sbjct: 96 DSHDLEFKTRHIREFLEEGNKVKVTIRFRGRELAHTEIGRGVLEKILELLEDGYTVEKTP 155 Query: 121 KFEGRQMIMILSSKC 135 EGR M M+L+ K Sbjct: 156 SMEGRFMSMVLAPKS 170 >gi|261493661|ref|ZP_05990180.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494328|ref|ZP_05990822.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309977|gb|EEY11186.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310661|gb|EEY11845.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 129 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/127 (46%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L++I FL DG KVKI+V+FRGRE+ HQ++G ++L +K EI+ ++ P K EGRQ+ Sbjct: 61 LRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVESAPGKLEGRQV 120 Query: 128 IMILSSK 134 +M+++ K Sbjct: 121 VMVIAPK 127 >gi|154488867|ref|ZP_02029716.1| hypothetical protein BIFADO_02175 [Bifidobacterium adolescentis L2-32] gi|154083004|gb|EDN82049.1| hypothetical protein BIFADO_02175 [Bifidobacterium adolescentis L2-32] Length = 232 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFDVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|213963373|ref|ZP_03391629.1| translation initiation factor IF-3 [Capnocytophaga sputigena Capno] gi|213954041|gb|EEB65367.1| translation initiation factor IF-3 [Capnocytophaga sputigena Capno] Length = 154 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 17 LEIANELELDLVEISPNATPPVCKVIDYKKFLYEQKKRDKELKAKATKVVIKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 77 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 136 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 137 KLEGKRMTMFLAP 149 >gi|86143058|ref|ZP_01061480.1| translation initiation factor IF-3 [Leeuwenhoekiella blandensis MED217] gi|85830503|gb|EAQ48962.1| translation initiation factor IF-3 [Leeuwenhoekiella blandensis MED217] Length = 146 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLVEI + P VCK++D +K Y +K + K +KE++ P Sbjct: 10 LEIAQELELDLVEISPNANPPVCKVMDYKKFVYEQKKREKAIKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K FL +G K+K V F+GR I+++D G+ LL + + E +++ P Sbjct: 70 DDHDYEFKKKHAIKFLEEGAKLKAYVFFKGRSIIYKDQGQILLLRLAQDLEEYGKVEQMP 129 Query: 121 KFEGRQMIMILSSK 134 K EG++MIM ++ K Sbjct: 130 KLEGKRMIMFMAPK 143 >gi|299140595|ref|ZP_07033733.1| translation initiation factor IF-3 [Prevotella oris C735] gi|298577561|gb|EFI49429.1| translation initiation factor IF-3 [Prevotella oris C735] Length = 231 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMAHQKGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|281423151|ref|ZP_06254064.1| translation initiation factor IF-3 [Prevotella oris F0302] gi|281402487|gb|EFB33318.1| translation initiation factor IF-3 [Prevotella oris F0302] Length = 231 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMAHQKGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|163788631|ref|ZP_02183076.1| translation initiation factor IF-3 [Flavobacteriales bacterium ALC-1] gi|159875868|gb|EDP69927.1| translation initiation factor IF-3 [Flavobacteriales bacterium ALC-1] Length = 134 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 76/132 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA E LDLVEI + P VCKI+D +K Y +K + K +KE++ P D Sbjct: 1 MADEQGLDLVEISPNANPPVCKIMDYKKFLYEQKKREKALKSKATKVVVKEIRFGPNTDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL+DG K+K V F+GR I+ ++ G+ LL + + E +++ PK Sbjct: 61 HDYEFKKKHAEKFLKDGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEEYGKVEQMPKL 120 Query: 123 EGRQMIMILSSK 134 EG++MIM ++ K Sbjct: 121 EGKRMIMFIAPK 132 >gi|282881464|ref|ZP_06290138.1| translation initiation factor IF-3 [Prevotella timonensis CRIS 5C-B1] gi|281304690|gb|EFA96776.1| translation initiation factor IF-3 [Prevotella timonensis CRIS 5C-B1] Length = 232 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 6/139 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ ++DLVEI + P VC+++D K Y +K A E ++KQ IKE++ P Sbjct: 38 LDLARQQDVDLVEISPNAQPPVCRLIDYSKFLYQQKKRAKEMKQKQVKVDIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 D HD Q KLK FL +G +V+ V FRGR I+ ++ G LL +N E FG++ ++ Sbjct: 98 DEHDYQFKLKHAREFLNEGNRVRAYVFFRGRSILFKEQGEVLLLRFANDLEDFGKVEQM- 156 Query: 118 CEPKFEGRQMIMILSSKCV 136 PK EG++M + LS K V Sbjct: 157 --PKLEGKRMFIYLSPKQV 173 >gi|159904304|ref|YP_001551648.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9211] gi|226713805|sp|A9BD81|IF3_PROM4 RecName: Full=Translation initiation factor IF-3 gi|159889480|gb|ABX09694.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9211] Length = 202 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKANPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +V++ FL+ G KVK +V FRGREI H +L LL+ + + E + + P Sbjct: 107 DQHDYEVRINQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEQAEVQQTP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|317502973|ref|ZP_07961062.1| translation initiation factor IF3 [Prevotella salivae DSM 15606] gi|315665909|gb|EFV05487.1| translation initiation factor IF3 [Prevotella salivae DSM 15606] Length = 230 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMARQNGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|311693963|gb|ADP96836.1| translation initiation factor 3 [marine bacterium HP15] Length = 142 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 90/134 (67%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLV++ S P VCKI+D K + +K A+KKQK T +KE+K RP Sbjct: 7 LKQAEEATLDLVQVTDS-DPIVCKIMDYGKKIFEEKKAKAAAKKKQKQTQVKELKFRPGT 65 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G + KI+++FRGRE+ HQ++G +L+ I+ E+++++ P Sbjct: 66 EEGDYQVKLRNLIRFLENGDRGKITIRFRGREMAHQEIGMQLMQRIETDIEELAQVEMRP 125 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+++ + Sbjct: 126 KMEGRQMTMVVAPR 139 >gi|156974365|ref|YP_001445272.1| hypothetical protein VIBHAR_02080 [Vibrio harveyi ATCC BAA-1116] gi|156525959|gb|ABU71045.1| hypothetical protein VIBHAR_02080 [Vibrio harveyi ATCC BAA-1116] Length = 166 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE +++ ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDLAVVESFPSKIEGRQ 156 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 157 MIMVLAPK 164 >gi|325298802|ref|YP_004258719.1| Translation initiation factor IF-3 [Bacteroides salanitronis DSM 18170] gi|324318355|gb|ADY36246.1| Translation initiation factor IF-3 [Bacteroides salanitronis DSM 18170] Length = 195 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E + DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LRMAEEHDADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+ G KVK V F+GR I+ ++ G LL + ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQGGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + L+ K Sbjct: 159 LLEGKRMTIALAPK 172 >gi|288801329|ref|ZP_06406783.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299 str. F0039] gi|288331712|gb|EFC70196.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299 str. F0039] Length = 199 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 7 LELARQQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQAKVDIKEIRFGPQT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL G KV+ V FRGR I+ ++ G LL E ++++ P Sbjct: 67 DEHDYQFKLKHAKEFLNGGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYAKVEQLP 126 Query: 121 KFEGRQMIMILSSK 134 K +G++M + L+ K Sbjct: 127 KLDGKKMFLYLTPK 140 >gi|325279134|ref|YP_004251676.1| Translation initiation factor IF-3 [Odoribacter splanchnicus DSM 20712] gi|324310943|gb|ADY31496.1| Translation initiation factor IF-3 [Odoribacter splanchnicus DSM 20712] Length = 179 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A +DLVEI + P VC+I+D K Y ++K E + K +KE++ P Sbjct: 45 LAMAEAAGMDLVEISPNAEPPVCRIIDYSKFLYQLKKKQKEIKAKSVKVVVKEIRFGPQT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++G KV+ V F+GR I+ +D G +LLS E +++ P Sbjct: 105 DDHDFNFKLKHAKEFLQEGAKVRAYVFFKGRSILFKDQGADLLSRFIAELEEYGKVEAAP 164 Query: 121 KFEGRQMIMILSSK 134 K EG++MI++L+ K Sbjct: 165 KLEGKKMIVVLAPK 178 >gi|86134204|ref|ZP_01052786.1| translation initiation factor IF-3 [Polaribacter sp. MED152] gi|85821067|gb|EAQ42214.1| translation initiation factor IF-3 [Polaribacter sp. MED152] Length = 153 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 76/133 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E LDLVEI P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 EMAREQELDLVEISPKAKPPVCKIIDYKKFLYEQKKREKALKSKATKVTIKEIRFGPQTD 77 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K FL+DG K+K V F+GR I+ ++ G+ LL + + E +++ PK Sbjct: 78 EHDYEFKKKHAIKFLQDGAKLKAFVFFKGRSIIFKEQGQILLLKLAQELEEYGKVEQLPK 137 Query: 122 FEGRQMIMILSSK 134 EG++MIM ++ K Sbjct: 138 LEGKRMIMFIAPK 150 >gi|57234473|ref|YP_181486.1| translation initiation factor IF-3 [Dehalococcoides ethenogenes 195] gi|57224921|gb|AAW39978.1| translation initiation factor IF-3 [Dehalococcoides ethenogenes 195] Length = 168 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 80/134 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ + P VC+++D K R+ K EA+K QK + +KE+++RP I Sbjct: 19 EQARKINLDLVEVAPTAVPPVCRLMDYGKYRFEQTKKDREAKKTQKVSLLKEIRVRPKIG 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ L G KVK++V FRGREI H +LG +LL + + +I+ I+ +P Sbjct: 79 EHDFDAKARSARKQLECGDKVKLTVMFRGREITHAELGLKLLKKMADSLTDIATIEGQPS 138 Query: 122 FEGRQMIMILSSKC 135 G +M + L K Sbjct: 139 LLGSRMHLTLLPKA 152 >gi|51210011|ref|YP_063675.1| translation initiation factor 3 [Gracilaria tenuistipitata var. liui] gi|68052104|sp|Q6B8N5|IF3C_GRATL RecName: Full=Translation initiation factor IF-3, chloroplastic gi|50657765|gb|AAT79750.1| translation initiation factor 3 [Gracilaria tenuistipitata var. liui] Length = 181 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/136 (45%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A LDLV I P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 46 LTIALNAGLDLVLISEKSNPPVCRIIDYGKYKFAQEKKAKEAKKKQHNVTIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD V++ FL+ G KVK +V FRGREI H L ELL+ + + IS I P Sbjct: 106 DVHDYNVRINQAFRFLQGGDKVKANVIFRGREIQHTKLAIELLNKMAQDLSHISEIQQPP 165 Query: 121 KFEGRQMIMILSSKCV 136 +G+ MIMILS K + Sbjct: 166 AKDGKNMIMILSPKKI 181 >gi|193215697|ref|YP_001996896.1| translation initiation factor IF-3 [Chloroherpeton thalassium ATCC 35110] gi|193089174|gb|ACF14449.1| translation initiation factor IF-3 [Chloroherpeton thalassium ATCC 35110] Length = 222 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 74/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDL+EI + P VC+I+D K Y K E +KKQK++ +KEV+ P Sbjct: 40 LRQAQKEGLDLIEIQPNAKPPVCRIVDYGKFLYEQDKRDKEQKKKQKASSVKEVRFHPNT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KV+ +V F GR I++ D G LL + ER +++ + Sbjct: 100 DTHDFDFKAAHAEEFLKKGDKVRATVVFLGRSIIYTDQGYALLERLSERLSSVAKPEGPA 159 Query: 121 KFEGRQMIMILS 132 K EG+ + + + Sbjct: 160 KLEGKNLYVFYA 171 >gi|269963855|ref|ZP_06178167.1| initiation factor IF3 [Vibrio harveyi 1DA3] gi|269831342|gb|EEZ85489.1| initiation factor IF3 [Vibrio harveyi 1DA3] Length = 166 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE + + ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDFAVVESFPSKIEGRQ 156 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 157 MIMVLAPK 164 >gi|269468319|gb|EEZ79995.1| translation initiation factor 3 [uncultured SUP05 cluster bacterium] gi|269468340|gb|EEZ80014.1| translation initiation factor 3, IF-3 [uncultured SUP05 cluster bacterium] Length = 136 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 86/133 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVE+ + P VCKI+D K Y +K + +KKQK T +K +K RP + Sbjct: 1 MAKDAGLDLVEVSPNAEPPVCKIMDFGKFLYEQKKQLSDQKKKQKKTQVKTIKYRPGTEE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K + + FL +G KVK+S+ FRGRE+ H++LG E+L I++ E + ++ + K Sbjct: 61 GDYQIKFRNLVKFLDNGDKVKVSIWFRGREMQHRELGMEMLDRIEKDTEEFANVEQKAKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 121 EGRQLGMMLAPKS 133 >gi|217967696|ref|YP_002353202.1| translation initiation factor IF-3 [Dictyoglomus turgidum DSM 6724] gi|217336795|gb|ACK42588.1| translation initiation factor IF-3 [Dictyoglomus turgidum DSM 6724] Length = 185 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 74/107 (69%), Gaps = 1/107 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-STGIKEVKMRPV 59 +++A+E NLDLVE+ + P VCKI+D K +Y + + EA+K QK ++ +KE+K+RP Sbjct: 35 LKLARERNLDLVEVAPNANPPVCKIMDFGKFKYELARKEKEAKKNQKIASEVKEIKIRPN 94 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI 106 I+ HD QVKL+ I FL G KV++ + F+GR++++ + G +LL I Sbjct: 95 IEEHDYQVKLRKIREFLEKGYKVRLIILFKGRQLIYNEWGDKLLERI 141 >gi|258623265|ref|ZP_05718272.1| initiation factor IF3 [Vibrio mimicus VM573] gi|258625494|ref|ZP_05720386.1| initiation factor IF3 [Vibrio mimicus VM603] gi|262164340|ref|ZP_06032078.1| translation initiation factor 3 [Vibrio mimicus VM223] gi|262173543|ref|ZP_06041220.1| translation initiation factor 3 [Vibrio mimicus MB-451] gi|262403447|ref|ZP_06080005.1| translation initiation factor 3 [Vibrio sp. RC586] gi|258582200|gb|EEW07057.1| initiation factor IF3 [Vibrio mimicus VM603] gi|258584451|gb|EEW09193.1| initiation factor IF3 [Vibrio mimicus VM573] gi|261890901|gb|EEY36888.1| translation initiation factor 3 [Vibrio mimicus MB-451] gi|262026720|gb|EEY45387.1| translation initiation factor 3 [Vibrio mimicus VM223] gi|262349951|gb|EEY99086.1| translation initiation factor 3 [Vibrio sp. RC586] Length = 129 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K E RQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTKIEARQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|91793062|ref|YP_562713.1| initiation factor 3 [Shewanella denitrificans OS217] gi|91715064|gb|ABE54990.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella denitrificans OS217] Length = 128 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/126 (46%), Positives = 81/126 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D +D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTDENDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK + ++ PK EGRQ I Sbjct: 61 LRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLEVYAVVESFPKMEGRQAI 120 Query: 129 MILSSK 134 M+L+ K Sbjct: 121 MVLAPK 126 >gi|294783293|ref|ZP_06748617.1| translation initiation factor IF-3 [Fusobacterium sp. 1_1_41FAA] gi|294480171|gb|EFG27948.1| translation initiation factor IF-3 [Fusobacterium sp. 1_1_41FAA] Length = 180 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI P VCK++D K +Y + EA+K QK +KE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPGANPPVCKVMDYSKYKYEQTRKLKEAKKNQKQVVVKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVKI++ GRE MH +LG L I E+F E + + E Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEV--EK 163 Query: 121 KFEGRQMIMILSSK 134 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPK 177 >gi|224023752|ref|ZP_03642118.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM 18228] gi|224016974|gb|EEF74986.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM 18228] Length = 194 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHGADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 LLEGKRMTISLS 170 >gi|11465469|ref|NP_045140.1| translation initiation factor 3 [Cyanidium caldarium] gi|14194842|sp|Q9TLX8|IF3C_CYACA RecName: Full=Translation initiation factor IF-3, chloroplastic gi|6466372|gb|AAF12954.1|AF022186_77 unknown [Cyanidium caldarium] Length = 185 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ +DLV ++ P VCK++D K ++ ++K E RKKQ +KEVKM I Sbjct: 47 VEYAKNQGVDLVLVNEISDPPVCKLIDYGKHKFIVEKRVKEGRKKQSGALVKEVKMTYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + +L FL+ G KVK+++ F+GREI H LG LL+ + +I+ + P Sbjct: 107 NEHDYETRLNQAFKFLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSP 166 Query: 121 KFEGRQMIMILSSKCV 136 +G+ MI+IL+ K V Sbjct: 167 YQDGKTMILILTPKIV 182 >gi|302346318|ref|YP_003814616.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC 25845] gi|302150892|gb|ADK97153.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC 25845] Length = 226 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LELAQKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPK 171 >gi|124026795|ref|YP_001015910.1| translation initiation factor IF-3 [Prochlorococcus marinus str. NATL1A] gi|166198963|sp|A2C586|IF3_PROM1 RecName: Full=Translation initiation factor IF-3 gi|123961863|gb|ABM76646.1| Translation Initiation factor 3 [Prochlorococcus marinus str. NATL1A] Length = 202 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + TP VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMSKDLEEKAEVQQSP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|150006538|ref|YP_001301282.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482] gi|254881561|ref|ZP_05254271.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA] gi|294778843|ref|ZP_06744260.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510] gi|319642945|ref|ZP_07997581.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A] gi|166198948|sp|A6L7J6|IF3_BACV8 RecName: Full=Translation initiation factor IF-3 gi|149934962|gb|ABR41660.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482] gi|254834354|gb|EET14663.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA] gi|294447296|gb|EFG15879.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510] gi|317385493|gb|EFV66436.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A] Length = 198 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + L+ K Sbjct: 159 LLEGKRMTISLAPK 172 >gi|15601864|ref|NP_232684.1| initiation factor IF3 [Vibrio cholerae O1 biovar eltor str. N16961] gi|121730171|ref|ZP_01682565.1| initiation factor IF3 [Vibrio cholerae V52] gi|147672230|ref|YP_001215777.1| initiation factor IF3 [Vibrio cholerae O395] gi|153803274|ref|ZP_01957860.1| initiation factor IF3 [Vibrio cholerae MZO-3] gi|227811911|ref|YP_002811921.1| initiation factor IF3 [Vibrio cholerae M66-2] gi|229506558|ref|ZP_04396067.1| translation initiation factor 3 [Vibrio cholerae BX 330286] gi|229510646|ref|ZP_04400126.1| translation initiation factor 3 [Vibrio cholerae B33] gi|229514760|ref|ZP_04404221.1| translation initiation factor 3 [Vibrio cholerae TMA 21] gi|229517223|ref|ZP_04406668.1| translation initiation factor 3 [Vibrio cholerae RC9] gi|229522961|ref|ZP_04412375.1| translation initiation factor 3 [Vibrio cholerae TM 11079-80] gi|229526101|ref|ZP_04415505.1| translation initiation factor 3 [Vibrio cholerae bv. albensis VL426] gi|229527752|ref|ZP_04417143.1| translation initiation factor 3 [Vibrio cholerae 12129(1)] gi|229606037|ref|YP_002876741.1| translation initiation factor 3 [Vibrio cholerae MJ-1236] gi|254284960|ref|ZP_04959926.1| initiation factor IF3 [Vibrio cholerae AM-19226] gi|254850513|ref|ZP_05239863.1| translation initiation factor IF-3 [Vibrio cholerae MO10] gi|255745913|ref|ZP_05419860.1| translation initiation factor 3 [Vibrio cholera CIRS 101] gi|261212791|ref|ZP_05927075.1| translation initiation factor 3 [Vibrio sp. RC341] gi|262163530|ref|ZP_06031276.1| translation initiation factor 3 [Vibrio cholerae INDRE 91/1] gi|262168211|ref|ZP_06035909.1| translation initiation factor 3 [Vibrio cholerae RC27] gi|297579609|ref|ZP_06941536.1| initiation factor IF3 [Vibrio cholerae RC385] gi|298500134|ref|ZP_07009940.1| translation initiation factor IF-3 [Vibrio cholerae MAK 757] gi|121628090|gb|EAX60630.1| initiation factor IF3 [Vibrio cholerae V52] gi|124121214|gb|EAY39957.1| initiation factor IF3 [Vibrio cholerae MZO-3] gi|146314613|gb|ABQ19153.1| initiation factor IF3 [Vibrio cholerae O395] gi|150424963|gb|EDN16740.1| initiation factor IF3 [Vibrio cholerae AM-19226] gi|227011053|gb|ACP07264.1| initiation factor IF3 [Vibrio cholerae M66-2] gi|227014956|gb|ACP11165.1| initiation factor IF3 [Vibrio cholerae O395] gi|229334114|gb|EEN99599.1| translation initiation factor 3 [Vibrio cholerae 12129(1)] gi|229336259|gb|EEO01277.1| translation initiation factor 3 [Vibrio cholerae bv. albensis VL426] gi|229340178|gb|EEO05186.1| translation initiation factor 3 [Vibrio cholerae TM 11079-80] gi|229345259|gb|EEO10232.1| translation initiation factor 3 [Vibrio cholerae RC9] gi|229348740|gb|EEO13698.1| translation initiation factor 3 [Vibrio cholerae TMA 21] gi|229353091|gb|EEO18031.1| translation initiation factor 3 [Vibrio cholerae B33] gi|229356909|gb|EEO21827.1| translation initiation factor 3 [Vibrio cholerae BX 330286] gi|229372523|gb|ACQ62945.1| translation initiation factor 3 [Vibrio cholerae MJ-1236] gi|254846218|gb|EET24632.1| translation initiation factor IF-3 [Vibrio cholerae MO10] gi|255735667|gb|EET91065.1| translation initiation factor 3 [Vibrio cholera CIRS 101] gi|260837856|gb|EEX64533.1| translation initiation factor 3 [Vibrio sp. RC341] gi|262023454|gb|EEY42157.1| translation initiation factor 3 [Vibrio cholerae RC27] gi|262028097|gb|EEY46756.1| translation initiation factor 3 [Vibrio cholerae INDRE 91/1] gi|297535255|gb|EFH74089.1| initiation factor IF3 [Vibrio cholerae RC385] gi|297542115|gb|EFH78166.1| translation initiation factor IF-3 [Vibrio cholerae MAK 757] Length = 129 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDVGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K E RQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTKIEARQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|87301670|ref|ZP_01084510.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701] gi|87283887|gb|EAQ75841.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701] Length = 218 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRDLDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+DG KVK +V FRGREI H L +LL + + E + I +P Sbjct: 107 DSHDYQVRIGQAVRFLKDGDKVKCTVIFRGREIQHTALAEQLLFRMAKDLEESAEIQQDP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|260592278|ref|ZP_05857736.1| translation initiation factor IF-3 [Prevotella veroralis F0319] gi|260535912|gb|EEX18529.1| translation initiation factor IF-3 [Prevotella veroralis F0319] Length = 226 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LELAQKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPK 171 >gi|212691283|ref|ZP_03299411.1| hypothetical protein BACDOR_00774 [Bacteroides dorei DSM 17855] gi|237712288|ref|ZP_04542769.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA] gi|237726427|ref|ZP_04556908.1| translation initiation factor IF-3 [Bacteroides sp. D4] gi|265751996|ref|ZP_06087789.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA] gi|212666515|gb|EEB27087.1| hypothetical protein BACDOR_00774 [Bacteroides dorei DSM 17855] gi|229434953|gb|EEO45030.1| translation initiation factor IF-3 [Bacteroides dorei 5_1_36/D4] gi|229453609|gb|EEO59330.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA] gi|263236788|gb|EEZ22258.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA] Length = 198 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + L+ K Sbjct: 159 LLEGKRMTISLAPK 172 >gi|330685702|gb|EGG97341.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU121] Length = 175 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVDLDLVIVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKTINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ L E +++ I+ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRQLEKFAEECKDLATIEQKP 158 Query: 121 KFEGRQMIMILS 132 K EGRQM ++LS Sbjct: 159 KMEGRQMFLMLS 170 >gi|288924995|ref|ZP_06418931.1| translation initiation factor IF-3 [Prevotella buccae D17] gi|288338185|gb|EFC76535.1| translation initiation factor IF-3 [Prevotella buccae D17] Length = 221 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ IKE++ P Sbjct: 33 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEIKEIRFGPQT 92 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 93 DEHDYQFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 152 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 153 KLEGKKMFLYMAPK 166 >gi|323344264|ref|ZP_08084490.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269] gi|323094993|gb|EFZ37568.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269] Length = 230 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E+ +++ P Sbjct: 98 DEHDYQFKLKHAKEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|315608031|ref|ZP_07883024.1| translation initiation factor IF3 [Prevotella buccae ATCC 33574] gi|315250500|gb|EFU30496.1| translation initiation factor IF3 [Prevotella buccae ATCC 33574] Length = 226 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 158 KLEGKKMFLYMAPK 171 >gi|260777880|ref|ZP_05886773.1| translation initiation factor 3 [Vibrio coralliilyticus ATCC BAA-450] gi|260605893|gb|EEX32178.1| translation initiation factor 3 [Vibrio coralliilyticus ATCC BAA-450] Length = 154 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 25 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE +++ ++ P K EGRQ Sbjct: 85 KLRNLTRFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTVDLAVVESFPKKIEGRQ 144 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 145 MIMVLAPK 152 >gi|94264274|ref|ZP_01288068.1| Initiation factor 3 [delta proteobacterium MLMS-1] gi|93455319|gb|EAT05526.1| Initiation factor 3 [delta proteobacterium MLMS-1] Length = 142 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+ + LDLVE+ + P VC+I+D K RY K +A+KKQ +KE+K+RP Sbjct: 7 MVKAEASGLDLVEVSPTAKPPVCRIMDYGKYRYEQSKKQQDAKKKQTVVEVKEIKLRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMH-QDLGRELLSNIKERFGEISRIDCE 119 + HDL K+K I FL KVK++++FRGREI++ LG E+L+ I E + Sbjct: 67 EKHDLDFKIKNIKKFLLQKNKVKVTLRFRGREIVYATTLGAEILNRIAGELTEEGTLLQA 126 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM M++ K Sbjct: 127 PKMEGRQMTMLVGPKA 142 >gi|320109032|ref|YP_004184622.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4] gi|319927553|gb|ADV84628.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4] Length = 181 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I D K Y K+ ARKKQK IKEVK + Sbjct: 10 LKVARERGLDLVEISPNAVPPVCRIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL DG KVK S++FRGR++ H+DLG ++++ + G+ ++ P Sbjct: 70 DEHDYQTKKNMAVRFLGDGDKVKASLRFRGRQMAHRDLGYKIINRLIMDIGDAGIVEFMP 129 Query: 121 KFEGRQMIMILSS 133 + EG + I++ Sbjct: 130 RMEGTTLHAIIAP 142 >gi|325109129|ref|YP_004270197.1| bacterial translation initiation factor 3 (bIF-3) [Planctomyces brasiliensis DSM 5305] gi|324969397|gb|ADY60175.1| bacterial translation initiation factor 3 (bIF-3) [Planctomyces brasiliensis DSM 5305] Length = 151 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +AQEA LDLVE+ P VC+I+D K +Y QK K T +KE+++RP I Sbjct: 18 MSIAQEAGLDLVEVAPDARPPVCRIMDYGKFKYE-QKKRQSKNTKVHQTQLKEIRLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KVK++V FRGRE H + GR++L++I +I++++ P Sbjct: 77 GDHDIEFKMKKARDFLVHRDKVKLTVMFRGRENAHHERGRDVLNSIVADLEDIAKLEKPP 136 Query: 121 KFE-GRQMIMILSSK 134 E GR M IL+ + Sbjct: 137 GMESGRSMTAILAPR 151 >gi|288802818|ref|ZP_06408255.1| translation initiation factor IF-3 [Prevotella melaninogenica D18] gi|288334635|gb|EFC73073.1| translation initiation factor IF-3 [Prevotella melaninogenica D18] Length = 219 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 31 LELAQREGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 91 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFSNDLEELAKVEQLP 150 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 151 KLEGKKMFLYLAPK 164 >gi|72383053|ref|YP_292408.1| translation initiation factor IF-3 [Prochlorococcus marinus str. NATL2A] gi|123759845|sp|Q46IH3|IF3_PROMT RecName: Full=Translation initiation factor IF-3 gi|72002903|gb|AAZ58705.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus marinus str. NATL2A] Length = 202 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + TP VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMAKDLEEKAEVQQSP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|269102905|ref|ZP_06155602.1| translation initiation factor 3 [Photobacterium damselae subsp. damselae CIP 102761] gi|268162803|gb|EEZ41299.1| translation initiation factor 3 [Photobacterium damselae subsp. damselae CIP 102761] Length = 137 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A EA +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP Sbjct: 1 MNAAHEAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKKQKQIQIKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK+ +++ ++ P Sbjct: 61 DEGDYQVKLRNLSRFLEEGNKGKVTLRFRGREMAHQSIGIELLNRIKDDLIDLAVVESFP 120 Query: 121 -KFEGRQMIMILSSK 134 + EGRQM M+L+ K Sbjct: 121 SRVEGRQMTMMLAPK 135 >gi|206900270|ref|YP_002251027.1| translation initiation factor IF-3 [Dictyoglomus thermophilum H-6-12] gi|206739373|gb|ACI18431.1| translation initiation factor IF-3 [Dictyoglomus thermophilum H-6-12] Length = 168 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 85/132 (64%), Gaps = 1/132 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-STGIKEVKMRPV 59 +++A+E NLDLVE+ + P VC+I+D K +Y + + EA+K QK ++ +KE+K+RP Sbjct: 18 LKIAREKNLDLVEVAPNANPPVCRIMDFGKFKYELARKEKEAKKNQKIASEVKEIKIRPN 77 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I+ HD QVKL+ I FL G KV++ + F+GR++++ + G +LL I + ++ + + Sbjct: 78 IEEHDYQVKLRKIREFLEKGYKVRLIILFKGRQLIYNEWGDKLLERILQDISDLGTAEKK 137 Query: 120 PKFEGRQMIMIL 131 + G +I +L Sbjct: 138 GQQVGSSLITML 149 >gi|317476769|ref|ZP_07936012.1| translation initiation factor IF-3 [Bacteroides eggerthii 1_2_48FAA] gi|316906944|gb|EFV28655.1| translation initiation factor IF-3 [Bacteroides eggerthii 1_2_48FAA] Length = 200 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 73/131 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMIL 131 EG++M + L Sbjct: 159 ILEGKRMTIQL 169 >gi|326803828|ref|YP_004321646.1| translation initiation factor IF-3 [Aerococcus urinae ACS-120-V-Col10a] gi|326650733|gb|AEA00916.1| translation initiation factor IF-3 [Aerococcus urinae ACS-120-V-Col10a] Length = 111 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K RY Q+ A E RK QK+ +KE+++ P ID +D Q K++ F+ G KVK+S Sbjct: 1 MDYGKYRYQQQRKAREQRKNQKTIQVKEIRLSPTIDENDFQTKVRQGKKFIDKGDKVKVS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGR I H+DLGRE+L +++ ++ +PK EGR M + L+ K Sbjct: 61 IRFRGRAITHKDLGREVLERFASELADVATVEQKPKMEGRSMQLQLAPK 109 >gi|288905560|ref|YP_003430782.1| Translation initiation factor IF-3 [Streptococcus gallolyticus UCN34] gi|306831648|ref|ZP_07464805.1| translation initiation factor IF3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306833790|ref|ZP_07466915.1| translation initiation factor IF3 [Streptococcus bovis ATCC 700338] gi|325978551|ref|YP_004288267.1| translation initiation factor IF-3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732286|emb|CBI13853.1| Translation initiation factor IF-3 [Streptococcus gallolyticus UCN34] gi|304423984|gb|EFM27125.1| translation initiation factor IF3 [Streptococcus bovis ATCC 700338] gi|304426073|gb|EFM29188.1| translation initiation factor IF3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178479|emb|CBZ48523.1| Translation initiation factor IF-3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 176 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ ER +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAERTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|329954517|ref|ZP_08295608.1| translation initiation factor IF-3 [Bacteroides clarus YIT 12056] gi|328527485|gb|EGF54482.1| translation initiation factor IF-3 [Bacteroides clarus YIT 12056] Length = 200 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 74/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKIAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|288818072|ref|YP_003432420.1| translation initiation factor 3 [Hydrogenobacter thermophilus TK-6] gi|288787472|dbj|BAI69219.1| translation initiation factor 3 [Hydrogenobacter thermophilus TK-6] gi|308751674|gb|ADO45157.1| translation initiation factor IF-3 [Hydrogenobacter thermophilus TK-6] Length = 172 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 2/126 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 +++A+E LDLVEI P VCKILD K Y +K A+KKQ+ I K++++ Sbjct: 34 LKLAEEKGLDLVEIAPQANPPVCKILDYGKFVYEQKKKEKVAKKKQREHAIEVKDIQLST 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL +G KV+I ++FRGRE +H +LG L+ I E +I +I+ Sbjct: 94 RIDEHDLKVKLKHMREFLEEGDKVRIRIRFRGREHIHPELGDRLVQRILEELSDIGKIES 153 Query: 119 EPKFEG 124 EPK EG Sbjct: 154 EPKKEG 159 >gi|190571397|ref|YP_001975755.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018796|ref|ZP_03334604.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357669|emb|CAQ55113.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995747|gb|EEB56387.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 172 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ NLDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LEVAQSVNLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ FL G ++K++++FRGRE+++ ++G + L + +I++++ P Sbjct: 99 GDHDYETKLRQARDFLVHGHRIKVTMRFRGRELVNTEVGLKKLERLIRDAEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L++K Sbjct: 159 KREGNQYSLTLAAK 172 >gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio sp. AND4] gi|159175409|gb|EDP60206.1| 50S ribosomal protein L35 [Vibrio sp. AND4] Length = 166 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE + + ++ P + EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDFAVVESFPSRIEGRQ 156 Query: 127 MIMILSSK 134 MIM+L+ K Sbjct: 157 MIMVLAPK 164 >gi|150024984|ref|YP_001295810.1| translation initiation factor IF-3 [Flavobacterium psychrophilum JIP02/86] gi|149771525|emb|CAL42994.1| Translation initiation factor IF-3 [Flavobacterium psychrophilum JIP02/86] Length = 137 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A + LDLVEI + P VCKI+D +K Y +K E + K +KE++ P Sbjct: 1 MKLADQLELDLVEISPNAEPPVCKIMDYKKFVYMQKKREKELKAKSTQIVVKEIRFGPQT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+++D G+ LL + E +++ P Sbjct: 61 DEHDYEFKRKNAEKFLKEGSKLKAFVFFKGRSIIYKDQGQILLLRLATDLEEHGKVEAMP 120 Query: 121 KFEGRQMIMILSSK 134 EG++MIM ++ K Sbjct: 121 VLEGKRMIMFIAPK 134 >gi|309782528|ref|ZP_07677251.1| translation initiation factor IF-3 [Ralstonia sp. 5_7_47FAA] gi|308918619|gb|EFP64293.1| translation initiation factor IF-3 [Ralstonia sp. 5_7_47FAA] Length = 112 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 70/109 (64%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y QK A +A+ KQK +KEVK RP D +D VKL+ FL DG +VK++ Sbjct: 1 MDYGKFKYQEQKKAHDAKLKQKVIQVKEVKFRPGTDDNDYGVKLRNATRFLEDGDRVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ+LG +L IK E +++ PK EGRQ +M+L+ K Sbjct: 61 LRFRGREMAHQELGMRVLERIKSDLEEFGQVEQMPKMEGRQAVMMLAPK 109 >gi|283782962|ref|YP_003373716.1| translation initiation factor IF-3 [Gardnerella vaginalis 409-05] gi|283441312|gb|ADB13778.1| translation initiation factor IF-3 [Gardnerella vaginalis 409-05] Length = 253 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q +KE++ R I Sbjct: 58 LNLAREANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQTVAEVKEIRFRLKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 118 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPVGGVELLRRLADEVSESGTVEFAP 177 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 178 KQEGRNIIMTLAPK 191 >gi|154502802|ref|ZP_02039862.1| hypothetical protein RUMGNA_00616 [Ruminococcus gnavus ATCC 29149] gi|153796685|gb|EDN79105.1| hypothetical protein RUMGNA_00616 [Ruminococcus gnavus ATCC 29149] Length = 164 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EANLDLV+I + P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEANLDLVKIAPTAKPPVCKIIDYGKYKYEQTRKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + +++ ++ Sbjct: 90 DTNDLNTKVNNAKKFIGKGNKVKVTLRFRGREMAHVQSSKHILDDFAALLEDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|193211792|ref|YP_001997745.1| translation initiation factor IF-3 [Chlorobaculum parvum NCIB 8327] gi|254803486|sp|B3QRM3|IF3_CHLP8 RecName: Full=Translation initiation factor IF-3 gi|193085269|gb|ACF10545.1| translation initiation factor IF-3 [Chlorobaculum parvum NCIB 8327] Length = 212 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 81/132 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQ+ NLDL+E+ + P VCK+ + KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RLAQDRNLDLIEVQPNAQPPVCKLENYGKLIYKMDKKDKDLKKKQKTTSLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + + ER ++ D EPK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELANRLTERLSTVANRDGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|304389319|ref|ZP_07371284.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656577|ref|ZP_07909464.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327437|gb|EFL94670.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492532|gb|EFU82136.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 367 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ I Sbjct: 48 VSLADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P Sbjct: 108 DSHDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAP 167 Query: 121 KFEGRQMIMIL 131 + +GR M M++ Sbjct: 168 RQDGRSMTMVI 178 >gi|297242753|ref|ZP_06926691.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis AMD] gi|298253376|ref|ZP_06977168.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis 5-1] gi|296888964|gb|EFH27698.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis AMD] gi|297532771|gb|EFH71657.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis 5-1] Length = 215 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q +KE++ R I Sbjct: 20 LNLAREANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQTVAEVKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 80 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPVGGVELLRRLADEVSESGTVEFAP 139 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 140 KQEGRNIIMTLAPK 153 >gi|224542061|ref|ZP_03682600.1| hypothetical protein CATMIT_01235 [Catenibacterium mitsuokai DSM 15897] gi|224524994|gb|EEF94099.1| hypothetical protein CATMIT_01235 [Catenibacterium mitsuokai DSM 15897] Length = 183 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A +A LDLV + P+VC+I+D K R+ QK E +K K IKE ++ P I Sbjct: 47 MNRAYDAGLDLVCVAPKAKPAVCRIMDYGKYRFEQQKKQKEMKKNSKVVAIKETQLSPTI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L+DG KVK++++FRGR++ H DLG++++ + E ++ Sbjct: 107 DVHDKNVKLKRTLKWLQDGDKVKVAIRFRGRQMAHVDLGQKIMDDFIAECSEYCVVEKPA 166 Query: 121 KFEGRQMIMILSSK 134 K EGR + +L+ K Sbjct: 167 KLEGRTLTAMLAPK 180 >gi|317968497|ref|ZP_07969887.1| translation initiation factor IF-3 [Synechococcus sp. CB0205] Length = 213 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L FL+ G KVK +V FRGREI H L +LL + + E + I EP Sbjct: 107 DQHDYDVRLGQASRFLKAGDKVKCTVIFRGREIQHTALAEQLLRRMAKDLEEKAEIQQEP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|315655516|ref|ZP_07908415.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333] gi|315490171|gb|EFU79797.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333] Length = 367 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 76/129 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ ID Sbjct: 50 LADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKIDS 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P+ Sbjct: 110 HDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQ 169 Query: 123 EGRQMIMIL 131 +GR M M++ Sbjct: 170 DGRSMTMVI 178 >gi|298346970|ref|YP_003719657.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063] gi|298237031|gb|ADI68163.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063] Length = 367 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ I Sbjct: 48 VSLADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P Sbjct: 108 DSHDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAP 167 Query: 121 KFEGRQMIMIL 131 + +GR M M++ Sbjct: 168 RQDGRSMTMVI 178 >gi|260774299|ref|ZP_05883214.1| translation initiation factor 3 [Vibrio metschnikovii CIP 69.14] gi|260611260|gb|EEX36464.1| translation initiation factor 3 [Vibrio metschnikovii CIP 69.14] Length = 129 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE +I+ ++ P + E RQM Sbjct: 61 LRNLTSFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTADIAVVESFPSRIEARQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMMLAPK 127 >gi|308272688|emb|CBX29292.1| Translation initiation factor IF-3 [uncultured Desulfobacterium sp.] Length = 186 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI + P VCKI+D + +Y + K EA+KKQ + +KE+K+RP Sbjct: 53 LAAAADFGLDLVEISPNANPPVCKIMDYGRYKYELVKKKQEAKKKQSTFQVKEIKVRPKT 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK+ I F+ KVK++V FRGREI LGRELL I EI+ ++ P Sbjct: 113 SDHDLSVKIDHIIKFIGKKDKVKVTVVFRGREITLTQLGRELLDKIVSSTSEIAVVEQTP 172 Query: 121 KFEGRQMIMILSSK 134 +FEGR MIMIL+ K Sbjct: 173 RFEGRAMIMILAPK 186 >gi|94499190|ref|ZP_01305728.1| Translation initiation factor 3 (IF-3) [Oceanobacter sp. RED65] gi|94428822|gb|EAT13794.1| Translation initiation factor 3 (IF-3) [Oceanobacter sp. RED65] Length = 140 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 80/124 (64%), Gaps = 1/124 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV+I S P VCKI+D K Y +K A+KKQ T +KE+K RP + D QVKL Sbjct: 14 DLVQI-SDGDPIVCKIMDYGKKLYEEKKAKAAAKKKQVQTQVKEIKFRPGTEEGDYQVKL 72 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 + + FL G K KI+++FRGRE+ HQ+LG +LL ++E +++ ++ PK EGRQ+ M Sbjct: 73 RNLIKFLEHGDKAKITLRFRGREMAHQELGMQLLKRVEEDLQDLANVELRPKMEGRQLTM 132 Query: 130 ILSS 133 +L+ Sbjct: 133 VLAP 136 >gi|326800361|ref|YP_004318180.1| translation initiation factor IF-3 [Sphingobacterium sp. 21] gi|326551125|gb|ADZ79510.1| Translation initiation factor IF-3 [Sphingobacterium sp. 21] Length = 189 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VCK++D K Y +K E + K T IKE++ P Sbjct: 51 LAIADELELDLVEISPNANPPVCKVVDYSKFVYEQKKKLKEIKANAKQTVIKEIRFGPNT 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL G KV+ V F+GR I+++D G LL + EI +++ P Sbjct: 111 NEHDFEFKLKHAIKFLEAGEKVRAYVHFKGRAIVYKDRGEILLLKFAQALEEIGKVELLP 170 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 171 KLEGKRMFITVAPK 184 >gi|320353537|ref|YP_004194876.1| translation initiation factor 3 (bIF-3) [Desulfobulbus propionicus DSM 2032] gi|320122039|gb|ADW17585.1| bacterial translation initiation factor 3 (bIF-3) [Desulfobulbus propionicus DSM 2032] Length = 182 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE+ P VC+I++ K RY ++K EA+KKQ +E+K RP Sbjct: 47 LEAAQEQGLDLVEVSDKADPPVCRIMNFDKFRYELKKKQQEAKKKQTVIETREIKFRPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMH-QDLGRELLSNIKERFGEISRIDCE 119 + HDL K++ I FL + KVK++++FRGREI++ Q +G + L+ I + E I E Sbjct: 107 EEHDLNFKIRKIKEFLAEKNKVKVTMRFRGREIVYAQTIGLDALTKIADTLREDCVIIQE 166 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQ++M + K Sbjct: 167 PKMEGRQLVMFVGPKA 182 >gi|189219986|ref|YP_001940626.1| translation initiation factor IF-3 [Methylacidiphilum infernorum V4] gi|226707357|sp|B3DYI1|IF3_METI4 RecName: Full=Translation initiation factor IF-3 gi|189186844|gb|ACD84029.1| Translation initiation factor IF-3 [Methylacidiphilum infernorum V4] Length = 217 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVE+ P VCKILD K +Y++ K E K+ +T +KE+++ I+ HD +K Sbjct: 53 LDLVEVSPHAHPPVCKILDYGKFKYSLSKK--EKDSKKGATKLKEIQLHVNINEHDFLIK 110 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LK + F+ G KVK ++ RGREI HQDL L++ + + + + D EPK GR + Sbjct: 111 LKQAEAFMAKGMKVKFNLFLRGREITHQDLALNLMNRLIKELAHVGQTDQEPKLAGRNIS 170 Query: 129 MILS 132 + + Sbjct: 171 LTFT 174 >gi|153954229|ref|YP_001394994.1| hypothetical protein CKL_1604 [Clostridium kluyveri DSM 555] gi|219854834|ref|YP_002471956.1| hypothetical protein CKR_1491 [Clostridium kluyveri NBRC 12016] gi|146347110|gb|EDK33646.1| InfC [Clostridium kluyveri DSM 555] gi|219568558|dbj|BAH06542.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 170 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +DLV + P VCKI++ K Y K A A+K QK +KE+++ I Sbjct: 36 LNIAREKGMDLVMVSPQAKPPVCKIMNYSKFVYEQSKKAKLAKKNQKIVELKEIRLSATI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D+++K FL G KVK+S++FRGR+ + +LGR +L+ + E + ++ P Sbjct: 96 EQNDIEIKANNARKFLAKGNKVKVSIRFRGRQNNYTNLGRNVLNVFLSKVEEEASVERAP 155 Query: 121 KFEGRQMIMILSSK 134 K EG M MIL+ K Sbjct: 156 KLEGNNMFMILAPK 169 >gi|310658433|ref|YP_003936154.1| protein chain initiation factor if-3 [Clostridium sticklandii DSM 519] gi|308825211|emb|CBH21249.1| protein chain initiation factor IF-3 [Clostridium sticklandii] Length = 171 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A + NLDLV+I + P VCKI+D K +Y + K E++KKQK IKEV++RP I+ Sbjct: 37 NLATQKNLDLVKISPNANPPVCKIMDFGKFKYEMAKKEKESKKKQKVVVIKEVRLRPSIE 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K K FL G KVK+SV+FRGRE+ H+++G E+++ + E+ D P+ Sbjct: 97 EHDLSTKAKMAYKFLESGDKVKVSVRFRGRELGHKEIGVEVINKFIDLVKEVGTPDRAPR 156 Query: 122 FEGRQMIMILSSK 134 EG MI++L K Sbjct: 157 LEGNTMIVMLDPK 169 >gi|283769359|ref|ZP_06342258.1| translation initiation factor IF-3 [Bulleidia extructa W1219] gi|283104016|gb|EFC05400.1| translation initiation factor IF-3 [Bulleidia extructa W1219] Length = 182 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A + +LDL+ + ++ P V +ILD + + K EA++ Q T +K +++ PVI Sbjct: 46 LQAAYDQDLDLLLVSANANPPVARILDYGRYHFEDLKKKREAKRNQSVTEVKPLRLSPVI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK +L DG KV+I ++FRGR I Q++GRE++ ++ +I+ + Sbjct: 106 DQHDFETKLKKSREWLEDGLKVRIDMRFRGRMITRQEIGREVIERFTQQISDIADVSKPA 165 Query: 121 KFEGRQMIMILSSK 134 K EG + ++ S K Sbjct: 166 KLEGNTLSVVYSPK 179 >gi|189466355|ref|ZP_03015140.1| hypothetical protein BACINT_02730 [Bacteroides intestinalis DSM 17393] gi|189434619|gb|EDV03604.1| hypothetical protein BACINT_02730 [Bacteroides intestinalis DSM 17393] Length = 198 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEREVDLVEISPNAQPPVCRVIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEEGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|264679165|ref|YP_003279072.1| translation initiation factor IF-3 [Comamonas testosteroni CNB-2] gi|262209678|gb|ACY33776.1| translation initiation factor IF-3 [Comamonas testosteroni CNB-2] Length = 210 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 169 KLEGRQMIMMVAP 181 >gi|330995386|ref|ZP_08319296.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT 11841] gi|329575881|gb|EGG57405.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT 11841] Length = 214 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 73/134 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 39 LQMAEAQGVDLVEISPNAVPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVDVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAQGFLSDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M + ++ K Sbjct: 159 VLEGKRMTIFIAPK 172 >gi|299533557|ref|ZP_07046933.1| translation initiation factor IF-3 [Comamonas testosteroni S44] gi|298718463|gb|EFI59444.1| translation initiation factor IF-3 [Comamonas testosteroni S44] Length = 185 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMVAP 156 >gi|300726433|ref|ZP_07059881.1| translation initiation factor IF-3 [Prevotella bryantii B14] gi|299776281|gb|EFI72843.1| translation initiation factor IF-3 [Prevotella bryantii B14] Length = 208 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+++D K Y +K E ++KQ +KE++ P Sbjct: 41 LDLARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKRQKEMKQKQVKVEVKEIRFGPQT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 101 DEHDYQFKLKHAQEFLEEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 160 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K V Sbjct: 161 KLEGKKMFLYMAPKKV 176 >gi|149276634|ref|ZP_01882777.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] gi|149232303|gb|EDM37679.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] Length = 189 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I+D K Y +K E + K K T IK+++ P Sbjct: 52 LELAEEQALDLVEISPNAVPPVCRIIDYSKFLYEQKKKQKEIKAKAKQTIIKDIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL+ G KV+ V F+GR I++++ G LL + E +++ P Sbjct: 112 DDHDFQFKLKHATAFLQAGEKVRAYVHFKGRAIVYKERGEILLLKFAQALEEFGKVELFP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L K Sbjct: 172 KLEGKRMFLTLGPKAA 187 >gi|86608017|ref|YP_476779.1| translation initiation factor IF-3 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556559|gb|ABD01516.1| translation initiation factor IF-3 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 185 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + P VC+I+D K ++ +K EARKKQ + IKEVK R I Sbjct: 49 LRLAEEKDLDLVLVSEKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V+L++ FL DG KVK +V FRGRE H +LG ELL + + E++ + P Sbjct: 109 GEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQEVAEMQQPP 168 Query: 121 KFEGRQMIMILSSK 134 + EGR + MILS K Sbjct: 169 QKEGRNITMILSPK 182 >gi|320547007|ref|ZP_08041308.1| translation initiation factor IF3 [Streptococcus equinus ATCC 9812] gi|320448409|gb|EFW89151.1| translation initiation factor IF3 [Streptococcus equinus ATCC 9812] Length = 176 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V +I+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVARIMDYGKFKFEYQKKRKEQRKKQAVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ ER +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAERTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|116328739|ref|YP_798459.1| translation initiation factor IF-3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330604|ref|YP_800322.1| translation initiation factor IF-3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281641|sp|Q04U56|IF3_LEPBJ RecName: Full=Translation initiation factor IF-3 gi|122283476|sp|Q04ZG9|IF3_LEPBL RecName: Full=Translation initiation factor IF-3 gi|116121483|gb|ABJ79526.1| Translation initiation factor 3 (IF-3) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124293|gb|ABJ75564.1| Translation initiation factor 3 (IF-3) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 179 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E NLDLVE+ + VCKI+D K ++ + K EA+KKQ +KE+K+RP I Sbjct: 46 LRKAKEENLDLVEVSADQELHVCKIIDYGKYKFELLKKNKEAKKKQHVINVKEIKIRPRI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD ++K K FL G KVK+S++FRGRE+MH DLG +++ + E E + +P Sbjct: 106 ESHDYEIKKKHAQEFLGKGDKVKVSLRFRGREMMHSDLGMKVVYRMIEDLKEYGLAERDP 165 Query: 121 KFEGRQMIMILSSK 134 +G+Q+++I++ K Sbjct: 166 IQDGKQIVVIINPK 179 >gi|33241247|ref|NP_876189.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931228|sp|Q7V9N2|IF3_PROMA RecName: Full=Translation initiation factor IF-3 gi|33238777|gb|AAQ00842.1| Translation initiation factor 3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 201 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ LDLV + P VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H +L LL+ + + E + + P Sbjct: 107 DEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEPAEVQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|310821381|ref|YP_003953739.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|309394453|gb|ADO71912.1| Translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 194 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/114 (42%), Positives = 76/114 (66%) Query: 20 PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 P VCKI+D K +Y +K A EA+KKQ +KEVK+RP + HD + K++ + FL +G Sbjct: 4 PPVCKIMDYGKFKYEEKKKASEAKKKQVVVHLKEVKLRPKTEEHDYEFKVRNVKRFLEEG 63 Query: 80 CKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 K K+++ FRGREI H++LG +L ++ + E++ ++ P+ EGRQM MIL+ Sbjct: 64 NKAKVTIVFRGREITHKELGSAILDDVNKDLKEVAVVEQAPRMEGRQMFMILAP 117 >gi|218680046|ref|ZP_03527943.1| translation initiation factor IF-3 [Rhizobium etli CIAT 894] Length = 80 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/80 (52%), Positives = 59/80 (73%) Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 KMRP ID HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG LL +K E + Sbjct: 1 KMRPNIDTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMRLLQQVKADTTEFA 60 Query: 115 RIDCEPKFEGRQMIMILSSK 134 +++ EPK EGRQM+M+L+ K Sbjct: 61 KVEAEPKLEGRQMMMVLAPK 80 >gi|197294237|ref|YP_001798778.1| Translation initiation factor IF3 [Candidatus Phytoplasma australiense] gi|171853564|emb|CAM11430.1| Translation initiation factor IF3 [Candidatus Phytoplasma australiense] Length = 144 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++ +D+V +++ TP V +++D +K RY QK E +KK + + +KE+++ P I Sbjct: 10 LKLSEKKEIDIVVVNADSTPMVARLMDYQKHRYNQQKKHREDKKKSQVSVLKEIRISPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL KLK + FL+ G KVKIS++FRGR I + LG +L I + ++ + Sbjct: 70 DINDLNTKLKQMQKFLKQGDKVKISMRFRGRMINNSQLGETILKKIIKDLSNLANTESPL 129 Query: 121 KFEGRQMIMILS 132 K +G Q I +LS Sbjct: 130 KLKGNQFITVLS 141 >gi|194476916|ref|YP_002049095.1| translation initiation factor IF-3 [Paulinella chromatophora] gi|171191923|gb|ACB42885.1| translation initiation factor IF-3 [Paulinella chromatophora] Length = 216 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEIAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +LL + + E S P Sbjct: 107 DSHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTSLAEQLLMRLAKDLEEQSETQQLP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM+LS + Sbjct: 167 KREGRNMIMLLSPR 180 >gi|88809920|ref|ZP_01125425.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805] gi|88786110|gb|EAR17272.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805] Length = 220 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEPAEIQQPP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|332292753|ref|YP_004431362.1| translation initiation factor IF-3 [Krokinobacter diaphorus 4H-3-7-5] gi|332170839|gb|AEE20094.1| translation initiation factor IF-3 [Krokinobacter diaphorus 4H-3-7-5] Length = 151 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 76/132 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 LAAELELDLVEISPNAAPPVCKIIDYKKFVYEQKKREKVMKAKASKVIIKEIRFGPQTDD 77 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL++G K+K V F+GR I+++D G LL + + E+ +++ P+ Sbjct: 78 HDYEFKKKHAEKFLKEGAKLKAYVFFKGRSIIYKDQGEILLLRLAQELEELGKVEQLPRL 137 Query: 123 EGRQMIMILSSK 134 EG++M M ++ K Sbjct: 138 EGKRMTMFIAPK 149 >gi|171779891|ref|ZP_02920795.1| hypothetical protein STRINF_01678 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281239|gb|EDT46674.1| hypothetical protein STRINF_01678 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 176 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|325103181|ref|YP_004272835.1| bacterial translation initiation factor 3 (bIF-3) [Pedobacter saltans DSM 12145] gi|324972029|gb|ADY51013.1| bacterial translation initiation factor 3 (bIF-3) [Pedobacter saltans DSM 12145] Length = 181 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 74/136 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 44 LAMAEEQELDLVEISPNANPPVCRIIDYNKFIYEQKKKLKEIKANAKQTVIKEIRFGPNT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD Q KLK FL G KV+ V F+GR I++++ G LL + + +++ P Sbjct: 104 SDHDYQFKLKHAISFLEAGEKVRAYVHFKGRAIVYKEKGEILLLKFAQALEDYGKVELLP 163 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K Sbjct: 164 KLEGKRMFLTVAPKTT 179 >gi|149196438|ref|ZP_01873493.1| initiation factor IF-3 [Lentisphaera araneosa HTCC2155] gi|149140699|gb|EDM29097.1| initiation factor IF-3 [Lentisphaera araneosa HTCC2155] Length = 174 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 1/130 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG-IKEVKMRPVIDL 62 A LDLVE+ P V +I+D K Y +K +ARKKQ + +KE+K I Sbjct: 39 ADSEGLDLVELAPDAKPPVVRIMDYGKFIYEKKKQQKDARKKQMNNNQVKELKFHVNIHD 98 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK F+ G K+KI+++FR RE+ H +LG L+ I E GE I+ +PK Sbjct: 99 HDFQTKLKHASEFVAKGYKLKITLQFRAREMAHPELGDALMERIIETLGETVTIEAKPKL 158 Query: 123 EGRQMIMILS 132 GR M M LS Sbjct: 159 MGRNMSMQLS 168 >gi|148238481|ref|YP_001223868.1| translation initiation factor IF-3 [Synechococcus sp. WH 7803] gi|166233785|sp|A5GI06|IF3_SYNPW RecName: Full=Translation initiation factor IF-3 gi|147847020|emb|CAK22571.1| Translation initiation factor IF-3 [Synechococcus sp. WH 7803] Length = 220 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEPAEIQQPP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|24213942|ref|NP_711423.1| translation initiation factor IF-3 [Leptospira interrogans serovar Lai str. 56601] gi|45658305|ref|YP_002391.1| translation initiation factor IF-3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|29427482|sp|Q8F6Q9|IF3_LEPIN RecName: Full=Translation initiation factor IF-3 gi|59798052|sp|Q72PK8|IF3_LEPIC RecName: Full=Translation initiation factor IF-3 gi|24194799|gb|AAN48441.1| translation initiation factor IF-3 [Leptospira interrogans serovar Lai str. 56601] gi|45601547|gb|AAS71028.1| translation initiation factor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 179 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E NLDLVE+ + VCKI+D K ++ + K + EA+KKQ +KE+K+RP I Sbjct: 46 LRKAKEENLDLVEVSADQELHVCKIIDYGKYKFELLKKSKEAKKKQHVINVKEIKIRPRI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD ++K K FL G KVK+S++FRGRE+MH DLG +++ + E E + +P Sbjct: 106 ESHDYEIKKKHAQEFLGKGDKVKVSLRFRGREMMHSDLGMKVVYRMIEDLKEHGTAERDP 165 Query: 121 KFEGRQMIMILSSK 134 +G+Q+++I++ K Sbjct: 166 IQDGKQIVVIINPK 179 >gi|164687660|ref|ZP_02211688.1| hypothetical protein CLOBAR_01302 [Clostridium bartlettii DSM 16795] gi|164603434|gb|EDQ96899.1| hypothetical protein CLOBAR_01302 [Clostridium bartlettii DSM 16795] Length = 144 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A NLDLV+I + P VCKI+D K +Y + EA+KKQK+ +KE+++RP I+ Sbjct: 9 LANGKNLDLVKISPNAKPPVCKIMDYGKYKYEQARKEKEAKKKQKTIAVKEIRLRPGIES 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ E E P F Sbjct: 69 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFIEIVKEFGEPVKAPAF 128 Query: 123 EGRQMIMILSSK 134 EG M++I+ K Sbjct: 129 EGNNMVVIIDPK 140 >gi|149276294|ref|ZP_01882438.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] gi|149232814|gb|EDM38189.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] Length = 189 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 52 LALADELELDLVEISPNAVPPVCRIIDYSKFVYEQKKKQKEIKANAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL +G KV+ V F+GR I++++ G LL + +I +++ P Sbjct: 112 NDHDFQFKLKHAVSFLENGEKVRAYVHFKGRAIVYKEQGEILLLKFAQALEDIGKVELLP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 172 KLEGKRMFLTLAPKVA 187 >gi|260062395|ref|YP_003195475.1| translation initiation factor IF-3 [Robiginitalea biformata HTCC2501] gi|88783958|gb|EAR15129.1| translation initiation factor IF-3 [Robiginitalea biformata HTCC2501] Length = 153 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 74/131 (56%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI + P VCKI+D +K Y +K + K +KE++ P D H Sbjct: 19 AEEIGLDLVEISPTADPPVCKIMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNTDDH 78 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K K + FL+DG K+K V F+GR I+++D G LL + + + +++ PK E Sbjct: 79 DYDFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDKGEILLLRLAQDLEDYGKVEQMPKLE 138 Query: 124 GRQMIMILSSK 134 G++M M ++ K Sbjct: 139 GKRMTMFIAPK 149 >gi|255531805|ref|YP_003092177.1| translation initiation factor IF-3 [Pedobacter heparinus DSM 2366] gi|255344789|gb|ACU04115.1| translation initiation factor IF-3 [Pedobacter heparinus DSM 2366] Length = 189 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 52 LALADELELDLVEISPNAVPPVCRIIDYSKFVYEQKKKQKEIKANAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL +G KV+ V F+GR I++++ G LL + +I +++ P Sbjct: 112 NDHDFQFKLKHAISFLENGEKVRAYVHFKGRAIVYKEQGEILLLKFAQALEDIGKVELLP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 172 KLEGKRMFLTLAPKVA 187 >gi|254491506|ref|ZP_05104685.1| translation initiation factor IF-3, C-terminal domain, putative [Methylophaga thiooxidans DMS010] gi|224462984|gb|EEF79254.1| translation initiation factor IF-3, C-terminal domain, putative [Methylophaga thiooxydans DMS010] Length = 126 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 76/124 (61%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI P VC+I+D K + K +A+KKQK +KEVK RP + D QVKL+ Sbjct: 1 MEIAPQAKPPVCRIMDYGKFLFEESKQKAQAKKKQKQIQVKEVKFRPGTEEGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G K K+S++FRGRE+ HQDLG +LL + E+S ++ PK EGRQMIM+L Sbjct: 61 LIRFLESGNKTKVSLRFRGREMAHQDLGLKLLERVAADLDELSSVEQRPKKEGRQMIMVL 120 Query: 132 SSKC 135 + Sbjct: 121 APNS 124 >gi|325269094|ref|ZP_08135715.1| translation initiation factor IF3 [Prevotella multiformis DSM 16608] gi|324988715|gb|EGC20677.1| translation initiation factor IF3 [Prevotella multiformis DSM 16608] Length = 226 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDLAHKQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYNFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|260589751|ref|ZP_05855664.1| translation initiation factor IF-3 [Blautia hansenii DSM 20583] gi|260539991|gb|EEX20560.1| translation initiation factor IF-3 [Blautia hansenii DSM 20583] Length = 164 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ IKEV++ P I+ + Sbjct: 33 AAEAGLDLVKIAPTAKPPVCKIIDYGKYKYELARKEKEAKKKQKTIEIKEVRLSPNIEEN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ FL G KVK++++FRGRE+ H + +L E +++ ++ PK E Sbjct: 93 DLNTKVNNARKFLTKGNKVKVTLRFRGREMAHMQSSKCILEKFAEILSDVAVVEKAPKVE 152 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 153 GRSMTMFLTEK 163 >gi|221134665|ref|ZP_03560968.1| translation initiation factor IF-3 [Glaciecola sp. HTCC2999] Length = 135 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA +LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 1 MADTNSLDLVEISPNAEPPVCKVMDYGKFLFEKSKALKEQKKKQKQIQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K K+++++RGRE+ HQ++G ELL ++ +IS + P + Sbjct: 61 GDYQVKLRNLRRFLEAGDKAKVTIRYRGREMAHQEIGIELLKRVRADLEDISNCEAFPHR 120 Query: 122 FEGRQMIMILSS 133 EGRQMIM+L+ Sbjct: 121 VEGRQMIMVLAP 132 >gi|226355497|ref|YP_002785237.1| translation initiation factor IF-3 [Deinococcus deserti VCD115] gi|259491504|sp|C1D0V9|IF3_DEIDV RecName: Full=Translation initiation factor IF-3 gi|226317487|gb|ACO45483.1| putative translation initiation factor IF-3 [Deinococcus deserti VCD115] Length = 210 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 68/120 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E LDLV + P VC++LD + RY Q+N E RK+ +S +K +K R I Sbjct: 38 MNMAREKGLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRVRSQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL DG KVK+++ FRGRE H +LG +L + E ++ + P Sbjct: 98 DDHDFKTKTGHVRRFLDDGHKVKVTIMFRGRERTHPELGERILVRVAEALADVGTPEGMP 157 >gi|331083182|ref|ZP_08332298.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404571|gb|EGG84111.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 6_1_63FAA] Length = 195 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ IKEV++ P I+ + Sbjct: 64 AAEAGLDLVKIAPTAKPPVCKIIDYGKYKYELARKEKEAKKKQKTIEIKEVRLSPNIEEN 123 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ FL G KVK++++FRGRE+ H + +L E +++ ++ PK E Sbjct: 124 DLNTKVNNARKFLTKGNKVKVTLRFRGREMAHMQSSKCILEKFAEILSDVAVVEKAPKVE 183 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 184 GRSMTMFLTEK 194 >gi|86131541|ref|ZP_01050139.1| translation initiation factor IF-3 [Dokdonia donghaensis MED134] gi|85817986|gb|EAQ39154.1| translation initiation factor IF-3 [Dokdonia donghaensis MED134] Length = 151 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 76/132 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 LASELELDLVEISPNAAPPVCKIIDYKKFVYEQKKREKIMKAKASKVIIKEIRFGPNTDD 77 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL++G K+K V F+GR I+++D G LL + + E+ +++ P+ Sbjct: 78 HDYEFKKKHAEKFLKEGAKLKAYVFFKGRSIIYKDKGEILLLKLAQELEELGKVEQLPRL 137 Query: 123 EGRQMIMILSSK 134 EG++M M ++ K Sbjct: 138 EGKRMTMFIAPK 149 >gi|220930018|ref|YP_002506927.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|220000346|gb|ACL76947.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 176 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 80/131 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA NLDLV+I + P VCKI+D K + K EA+K QK IKEV++ I+ Sbjct: 42 KMAITKNLDLVKIVPNGAPPVCKIMDYGKYLFEQAKKEKEAKKNQKVVSIKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK+S++FRGRE+ + G+E+L E+ + +PK Sbjct: 102 EHDFDVKVKNAYKFLKDGDKVKVSIRFRGREMKYTSDGKEVLEKFANAVSEVGVAERQPK 161 Query: 122 FEGRQMIMILS 132 EGR M++ILS Sbjct: 162 LEGRSMMIILS 172 >gi|322372879|ref|ZP_08047415.1| translation initiation factor IF-3 [Streptococcus sp. C150] gi|321277921|gb|EFX54990.1| translation initiation factor IF-3 [Streptococcus sp. C150] Length = 176 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +IS I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDISIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|169334529|ref|ZP_02861722.1| hypothetical protein ANASTE_00932 [Anaerofustis stercorihominis DSM 17244] gi|169259246|gb|EDS73212.1| hypothetical protein ANASTE_00932 [Anaerofustis stercorihominis DSM 17244] Length = 150 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 76/132 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + NLDLV++ P VCKILD K +Y + E +K QK IKE++ + Sbjct: 11 LKQADQRNLDLVKVSPEAKPPVCKILDYGKFKYEQNRKEKENKKNQKVVNIKEIRTSVRV 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+VK K FL G KVK+SV+FRGRE+ + + G+E+L E+ I+ +P Sbjct: 71 QDHDLEVKAKNCRKFLSAGDKVKVSVRFRGREMAYVNRGKEVLLKFASMVDEVGTIETKP 130 Query: 121 KFEGRQMIMILS 132 K EGR M LS Sbjct: 131 KLEGRNYTMTLS 142 >gi|325283367|ref|YP_004255908.1| Translation initiation factor IF-3 [Deinococcus proteolyticus MRP] gi|324315176|gb|ADY26291.1| Translation initiation factor IF-3 [Deinococcus proteolyticus MRP] Length = 226 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 70/120 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLV + P VCK+LD + RY Q+N E RK+ +S +K +K R I Sbjct: 50 LRMAREKNLDLVMVSPQAVPPVCKLLDYGRFRYEQQQNEKENRKRARSQEVKSIKYRVKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL G KVK+++ FRGRE H +LG +L + E +I + +P Sbjct: 110 DDNDFKTKTNHVRRFLEAGHKVKVTIMFRGRERTHPELGERILVRVAETLQDIGAPESKP 169 >gi|148244739|ref|YP_001219433.1| translation initiation factor IF-3 [Candidatus Vesicomyosocius okutanii HA] gi|146326566|dbj|BAF61709.1| translation initiation factor IF-3 [Candidatus Vesicomyosocius okutanii HA] Length = 149 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A ++ LDLVE+ S P VCKI+D K Y +++ EA+KKQK +K +K RP + Sbjct: 13 QEAIQSELDLVEVSPSAQPPVCKIMDFGKFLYGLKQQKKEAKKKQKRNTVKTIKYRPGTE 72 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D Q+K + + FL +G KVK+ + FRGRE+ H++LG ++L I++ + + ++ + K Sbjct: 73 ESDYQIKFRNLVKFLDNGDKVKVGIWFRGREMQHKELGMKMLDRIEKDTEDFANVEQKAK 132 Query: 122 FEGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 133 MEGRQLGMMLAPKS 146 >gi|306820006|ref|ZP_07453656.1| translation initiation factor IF3 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551954|gb|EFM39895.1| translation initiation factor IF3 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 158 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 85/135 (62%), Gaps = 9/135 (6%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A NLDLV+I + P VCKI+D K +Y + K E++KKQK +KE+++RP+ID Sbjct: 21 NLALSKNLDLVKISPNSNPPVCKIMDFGKYKYELAKKEKESKKKQKIVSVKEIRLRPMID 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI-----SRI 116 HDL+ K FL G K+K++++FRGRE+ H+++G +++ E+F E+ + I Sbjct: 81 KHDLETKANMAKKFLEAGDKLKVTIRFRGRELGHKEMGNQVI----EKFVELIKDNAAPI 136 Query: 117 DCEPKFEGRQMIMIL 131 +P EG MI+I+ Sbjct: 137 GTKPHLEGNSMILIV 151 >gi|302670148|ref|YP_003830108.1| translation initiation factor IF-3 InfC [Butyrivibrio proteoclasticus B316] gi|302394621|gb|ADL33526.1| translation initiation factor IF-3 InfC [Butyrivibrio proteoclasticus B316] Length = 199 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + +DLV I + P VC+++D K +Y + EA+KKQK+ IKE+++ P ID Sbjct: 65 KIADDEGVDLVMIAPTAKPPVCRVVDYGKFKYEQLRKEKEAKKKQKTVEIKEIRLSPNID 124 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G +VKI+++FRGRE+ H +L++ E +++ I+ +PK Sbjct: 125 TNDLNTKVNAAKKFLEKGNRVKITLRFRGREMAHMGASVHILTDFAEALSDVAVIEKQPK 184 Query: 122 FEGRQMIMILSSK 134 EGR M M L+ K Sbjct: 185 VEGRSMTMFLTEK 197 >gi|78780114|ref|YP_398226.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9312] gi|123768927|sp|Q318A5|IF3_PROM9 RecName: Full=Translation initiation factor IF-3 gi|78713613|gb|ABB50790.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus marinus str. MIT 9312] Length = 190 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+++D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRVMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S I +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEIQQKP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|157414243|ref|YP_001485109.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9215] gi|254525365|ref|ZP_05137417.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9202] gi|166918493|sp|A8G7E2|IF3_PROM2 RecName: Full=Translation initiation factor IF-3 gi|157388818|gb|ABV51523.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9215] gi|221536789|gb|EEE39242.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9202] Length = 190 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMASDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|284037109|ref|YP_003387039.1| translation initiation factor IF-3 [Spirosoma linguale DSM 74] gi|283816402|gb|ADB38240.1| translation initiation factor IF-3 [Spirosoma linguale DSM 74] Length = 185 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ NLDLVE+ + P VC+I+D K +Y +K E + IKE++ P D Sbjct: 48 MAKAQNLDLVEVSPNAVPPVCRIVDYSKFKYEQKKKQKEIKANATKVVIKEIRFGPNTDD 107 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + KLK FL++G KVK V+F GR I+ +D G +LL + + +I+ EPK Sbjct: 108 HDFEFKLKHAINFLKEGAKVKAYVQFVGRAIVFKDRGFQLLERFSKGLEDYGKIEAEPKL 167 Query: 123 EGRQMIMILSSKCV 136 EG++M M LS K Sbjct: 168 EGKRMSMFLSPKVA 181 >gi|229027592|ref|ZP_04183810.1| Translation initiation factor IF-3 [Bacillus cereus AH1272] gi|228733711|gb|EEL84487.1| Translation initiation factor IF-3 [Bacillus cereus AH1272] Length = 112 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 66/109 (60%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K R+ QK E RK QK +KEV++ P ID HD KL+ FL G KVK S Sbjct: 1 MDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKAS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++F+GR I H+++G+ +L E E+S I+ +PK EGR M ++L+ K Sbjct: 61 IRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAPK 109 >gi|83647271|ref|YP_435706.1| translation initiation factor 3 [Hahella chejuensis KCTC 2396] gi|83635314|gb|ABC31281.1| Translation initiation factor 3 (IF-3) [Hahella chejuensis KCTC 2396] Length = 136 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++ LDLV+I S P VC+I+D K + +K A+KKQK T +KE+K RP Sbjct: 1 MEKAEQEGLDLVQIADS-DPVVCRIMDYGKKIFEEKKQKAAAKKKQKQTQVKEMKFRPGT 59 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K+S++FRGRE+ HQ+LG +LL +++ E ++ P Sbjct: 60 EEGDYQVKLRNLIRFLEHGDKAKVSIRFRGREMAHQELGLQLLQRVEKDLEEFGVVEQRP 119 Query: 121 KFEGRQMIMILSSK 134 K EGRQ +M+++ K Sbjct: 120 KMEGRQAMMVVAPK 133 >gi|123969378|ref|YP_001010236.1| translation initiation factor IF-3 [Prochlorococcus marinus str. AS9601] gi|166198966|sp|A2BTL8|IF3_PROMS RecName: Full=Translation initiation factor IF-3 gi|123199488|gb|ABM71129.1| Translation Initiation factor 3 [Prochlorococcus marinus str. AS9601] Length = 190 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMANDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|261880447|ref|ZP_06006874.1| initiation factor IF3 [Prevotella bergensis DSM 17361] gi|270332870|gb|EFA43656.1| initiation factor IF3 [Prevotella bergensis DSM 17361] Length = 228 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+I+D K Y +K E ++KQ +KE++ P Sbjct: 38 LDLARQQGMDLVEISPNAQPPVCRIIDYSKFLYQQKKRQKEMKQKQVKVDVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL FL++G KV+ V FRGR I+ ++ G LL E ++++ P Sbjct: 98 DDHDYNFKLNHAKQFLKEGNKVRAYVFFRGRSILFKEQGELLLLRFANDLEEYAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKRMFLFLAPKKV 173 >gi|313673283|ref|YP_004051394.1| bacterial translation initiation factor 3 (bif-3) [Calditerrivibrio nitroreducens DSM 19672] gi|312940039|gb|ADR19231.1| bacterial translation initiation factor 3 (bIF-3) [Calditerrivibrio nitroreducens DSM 19672] Length = 175 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 +++AQE DLVEI + P VCK+LD K ++ K EARKKQ+ I KE+K+RP Sbjct: 39 LKIAQERGYDLVEIAPNAKPPVCKLLDYGKFKFEKVKKEKEARKKQRQNMIETKELKLRP 98 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD VKLK I FL DG KVK+ V+F+GRE M + G +LL+ I ++ ++ Sbjct: 99 NIDEHDYDVKLKHIRRFLEDGDKVKLVVRFKGRETMFGEHGIDLLNRITADLQDLCVVEK 158 Query: 119 EPKFEGRQMIMILSSK 134 +P+ +GRQ +M+++ K Sbjct: 159 KPEMQGRQQVMVIAPK 174 >gi|313203699|ref|YP_004042356.1| bacterial translation initiation factor 3 (bif-3) [Paludibacter propionicigenes WB4] gi|312443015|gb|ADQ79371.1| bacterial translation initiation factor 3 (bIF-3) [Paludibacter propionicigenes WB4] Length = 206 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVEI + P VCKI+D +K Y I+K EA+ K +KE++ P Sbjct: 70 IRIADQLELDLVEISPNAVPPVCKIVDYQKFLYQIKKREKEAKAKTAKVVLKEIRFGPQT 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++GCKVK V F+GR I+ ++ G LL + +++D P Sbjct: 130 DDHDYNFKLKHAQEFLKEGCKVKAYVFFKGRSILFKEQGEVLLLRFASDLEDYAKVDQLP 189 Query: 121 KFEGRQMIMILSSK 134 + EG++MI++ S K Sbjct: 190 QLEGKRMIIMFSPK 203 >gi|33862192|ref|NP_893753.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931213|sp|Q7TU24|IF3_PROMP RecName: Full=Translation initiation factor IF-3 gi|33634410|emb|CAE20095.1| Translation Initiation factor 3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 190 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A E +KK T +KEVKMR I Sbjct: 47 LEIAHQRGLDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKETKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + P Sbjct: 107 DKHDYDVRIGQAVRFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEVQQRP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|126697165|ref|YP_001092051.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9301] gi|166198962|sp|A3PFC5|IF3_PROM0 RecName: Full=Translation initiation factor IF-3 gi|126544208|gb|ABO18450.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9301] Length = 190 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|332878462|ref|ZP_08446183.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683557|gb|EGJ56433.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 214 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 72/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 39 LQMAEAQGVDLVEISPNAVPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVDVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAQGFLSDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSS 133 EG++M + ++ Sbjct: 159 VLEGKRMTIFIAP 171 >gi|70726246|ref|YP_253160.1| translation initiation factor IF-3 [Staphylococcus haemolyticus JCSC1435] gi|68446970|dbj|BAE04554.1| translation initiation factor IF-3 [Staphylococcus haemolyticus JCSC1435] Length = 197 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 61 LEMAEHVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 120 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 121 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 180 Query: 121 KFEGRQMIMILS 132 K EGRQM ++L+ Sbjct: 181 KMEGRQMFIMLA 192 >gi|302327035|gb|ADL26236.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 194 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++A LDLVE+ + P VC+I++ K ++ K A A+ KQ +KE+KM P Sbjct: 38 LQMAKDAGLDLVEVSPNAKPPVCRIINYGKYKFEQLKKAKAAKAKQHVVKLKEIKMHPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q ++K FL+DG KVK+ ++FRGRE+ H D G+ L+ KE ++ + Sbjct: 98 AENDYQYRIKQAGEFLQDGMKVKLIMQFRGREMAHMDYGKRLMERAKEDLAPFGDLEMDS 157 Query: 121 KFEGRQMIMILSSK 134 + EG M+ I K Sbjct: 158 RVEGNTMLSIYGPK 171 >gi|325954888|ref|YP_004238548.1| translation initiation factor IF-3 [Weeksella virosa DSM 16922] gi|323437506|gb|ADX67970.1| translation initiation factor IF-3 [Weeksella virosa DSM 16922] Length = 156 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I P VC++++ +K Y +K E + KQ+ +KE++ P Sbjct: 22 LELAEEQGLDLVMISEKAVPPVCRVVEYKKFLYEQKKREKELKAKQQKVVVKEIRFGPQT 81 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K FL +G K+K V F+GR I+ +D G LL + + ++ +++ P Sbjct: 82 DDHDFDFKKKHARSFLEEGSKLKAYVFFKGRSIIFKDQGEILLLRLAQELEDVGKVEQLP 141 Query: 121 KFEGRQMIMILSSK 134 K EG++MIM+++ K Sbjct: 142 KLEGKRMIMMMAPK 155 >gi|325856667|ref|ZP_08172305.1| translation initiation factor IF-3 [Prevotella denticola CRIS 18C-A] gi|327313433|ref|YP_004328870.1| translation initiation factor IF-3 [Prevotella denticola F0289] gi|325483381|gb|EGC86356.1| translation initiation factor IF-3 [Prevotella denticola CRIS 18C-A] gi|326945632|gb|AEA21517.1| translation initiation factor IF-3 [Prevotella denticola F0289] Length = 226 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDLAHKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKELKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYNFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSK 134 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPK 171 >gi|206895742|ref|YP_002246953.1| translation initiation factor IF-3 [Coprothermobacter proteolyticus DSM 5265] gi|206738359|gb|ACI17437.1| translation initiation factor IF-3 [Coprothermobacter proteolyticus DSM 5265] Length = 183 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ DLVE+ + P VC+ +D K RY + K A EA++ Q +KE+++R Sbjct: 29 IRMARSRGYDLVEVAPTADPPVCRFIDYDKFRYEMAKKAKEAKRNQTIIEVKEIRLRLGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD++ K+K I FL +G KVK++++ RGRE ++ R+ L +I E+ ++ +++ + Sbjct: 89 DVHDMETKMKKIREFLEEGNKVKVTLRPRGRERALEEQIRQKLLSIAEKLSDVGQVEQDV 148 Query: 121 KFEGRQMIMILSSK 134 + EGR +++ K Sbjct: 149 RAEGRNFYFMIAPK 162 >gi|78189670|ref|YP_380008.1| translation initiation factor IF-3 [Chlorobium chlorochromatii CaD3] gi|123729829|sp|Q3APW0|IF3_CHLCH RecName: Full=Translation initiation factor IF-3 gi|78171869|gb|ABB28965.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium chlorochromatii CaD3] Length = 226 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 79/130 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E N DL+E+ + P VCK +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RMAEERNQDLIEVQPNAAPPVCKFDNLGKLLYKMDKRDKDLKKKQKATTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSIVSNRDGDPK 164 Query: 122 FEGRQMIMIL 131 FEG+++ + Sbjct: 165 FEGKKLFVYF 174 >gi|73662393|ref|YP_301174.1| translation initiation factor IF-3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123775365|sp|Q49YB2|IF3_STAS1 RecName: Full=Translation initiation factor IF-3 gi|72494908|dbj|BAE18229.1| translation initiation factor IF-3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 175 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LD+V + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVGLDVVIMAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKTINLKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L E+ +I+ ++ P Sbjct: 99 EEHDFQTKLKNGRKFLEKGDKCKVSIRFRGRAITHKEIGQRVLEKFAEQCKDIATVEQRP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++LS Sbjct: 159 KMDGRQMFIMLSP 171 >gi|228477505|ref|ZP_04062141.1| translation initiation factor IF-3 [Streptococcus salivarius SK126] gi|312862919|ref|ZP_07723159.1| translation initiation factor IF-3 [Streptococcus vestibularis F0396] gi|322516716|ref|ZP_08069625.1| translation initiation factor IF3 [Streptococcus vestibularis ATCC 49124] gi|228250940|gb|EEK10128.1| translation initiation factor IF-3 [Streptococcus salivarius SK126] gi|311101779|gb|EFQ59982.1| translation initiation factor IF-3 [Streptococcus vestibularis F0396] gi|322124749|gb|EFX96187.1| translation initiation factor IF3 [Streptococcus vestibularis ATCC 49124] Length = 176 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|261415203|ref|YP_003248886.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371659|gb|ACX74404.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 203 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++A LDLVE+ + P VC+I++ K ++ K A A+ KQ +KE+KM P Sbjct: 47 LQMAKDAGLDLVEVSPNAKPPVCRIINYGKYKFEQLKKAKAAKAKQHVVKLKEIKMHPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q ++K FL+DG KVK+ ++FRGRE+ H D G+ L+ KE ++ + Sbjct: 107 AENDYQYRIKQAGEFLQDGMKVKLIMQFRGREMAHMDYGKRLMERAKEDLAPFDDLEMDS 166 Query: 121 KFEGRQMIMILSSK 134 + EG M+ I K Sbjct: 167 RVEGNTMLSIYGPK 180 >gi|228475216|ref|ZP_04059942.1| translation initiation factor IF-3 [Staphylococcus hominis SK119] gi|228270827|gb|EEK12229.1| translation initiation factor IF-3 [Staphylococcus hominis SK119] Length = 175 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|261749265|ref|YP_003256950.1| translation initiation factor 3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497357|gb|ACX83807.1| translation initiation factor 3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 167 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A++ LDLVEI+ V P VCKILD +K Y +K + + KQ KE++ P I Sbjct: 32 LQFARDKELDLVEINPKVDPPVCKILDYKKFLYEQKKKKKQFKAKQIKVNTKEIRFGPQI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +VK+K+ + FL G KVK+ V F+GR I+++D G+ L E E +++ P Sbjct: 92 GDHDGKVKIKSAEKFLMRGDKVKVFVFFKGRSIVYKDQGKIKLLKFAEEIEEYGKVEQMP 151 Query: 121 KFEGRQMIMILSSK 134 EG++M MIL+ K Sbjct: 152 VMEGKRMYMILAPK 165 >gi|167587362|ref|ZP_02379750.1| translation initiation factor IF-3 [Burkholderia ubonensis Bu] Length = 112 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPK 109 >gi|221066195|ref|ZP_03542300.1| translation initiation factor IF-3 [Comamonas testosteroni KF-1] gi|220711218|gb|EED66586.1| translation initiation factor IF-3 [Comamonas testosteroni KF-1] Length = 185 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMVAP 156 >gi|90021225|ref|YP_527052.1| translation initiation factor IF-3 [Saccharophagus degradans 2-40] gi|89950825|gb|ABD80840.1| bacterial translation initiation factor 3 (bIF-3) [Saccharophagus degradans 2-40] Length = 182 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 79/125 (63%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV I + P VCKI+D K + +K A+KKQK +KE+K RP + D +VKL Sbjct: 55 DLVLIAADADPVVCKIMDYGKHLFEAKKAKAAAKKKQKQQQVKEMKFRPGTEEGDYKVKL 114 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 K + FL G K K+S+++RGRE+ HQ+LG E++ I+ EI ++ PK EGRQ+IM Sbjct: 115 KNLQRFLEQGDKAKVSLRYRGREMAHQELGMEMMKRIEVDLAEIGTVEQYPKMEGRQLIM 174 Query: 130 ILSSK 134 +++ K Sbjct: 175 VIAPK 179 >gi|11932198|emb|CAC19093.1| IF-3 [Listeria innocua] gi|11932206|emb|CAC19097.1| IF-3 [Listeria ivanovii] gi|11932929|emb|CAC19103.1| IF-3 [Listeria welshimeri] Length = 139 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 68/103 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 D HD KL+ FL G KVK S++F+GR I H+++G+++L Sbjct: 95 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVL 137 >gi|318042883|ref|ZP_07974839.1| translation initiation factor IF-3 [Synechococcus sp. CB0101] Length = 215 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L +LL + + E + I +P Sbjct: 107 DQHDYDVRIGQASRFLKAGDKVKCTVIFRGREIQHTALAEQLLRRMAKDLEEKAEIQQDP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|223044119|ref|ZP_03614158.1| translation initiation factor IF-3 [Staphylococcus capitis SK14] gi|314933835|ref|ZP_07841200.1| translation initiation factor IF-3 [Staphylococcus caprae C87] gi|222442513|gb|EEE48619.1| translation initiation factor IF-3 [Staphylococcus capitis SK14] gi|313653985|gb|EFS17742.1| translation initiation factor IF-3 [Staphylococcus caprae C87] Length = 175 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKELRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEQFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|327489894|gb|EGF21683.1| translation initiation factor IF3 [Streptococcus sanguinis SK1058] gi|332361940|gb|EGJ39742.1| translation initiation factor IF3 [Streptococcus sanguinis SK49] Length = 185 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G K+K+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 110 GDFDTKLRNARKFLEKGNKIKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 170 DGRQMFMQMAP 180 >gi|192359216|ref|YP_001982989.1| initiation factor 3 [Cellvibrio japonicus Ueda107] gi|190685381|gb|ACE83059.1| initiation factor 3 [Cellvibrio japonicus Ueda107] Length = 143 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/127 (44%), Positives = 82/127 (64%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKI+D K + I+K A+KKQK +KE+K RP + D QV Sbjct: 14 TLDLVEIVADSDPIVCKIMDYGKHLFEIKKTKAAAKKKQKQQQVKEMKFRPGTEEADYQV 73 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KLKA+ FL G K K+++KFRGRE+ HQ+LG E++ I++ E+ ++ K EG+Q+ Sbjct: 74 KLKALIRFLEHGDKAKVTLKFRGRELAHQELGMEMMQRIEKDLTELGTVEQAAKMEGKQL 133 Query: 128 IMILSSK 134 M+++ K Sbjct: 134 TMVIAPK 140 >gi|125718311|ref|YP_001035444.1| translation initiation factor IF-3 [Streptococcus sanguinis SK36] gi|323351272|ref|ZP_08086928.1| translation initiation factor IF3 [Streptococcus sanguinis VMC66] gi|125498228|gb|ABN44894.1| Translation initiation factor IF-3, putative [Streptococcus sanguinis SK36] gi|322122496|gb|EFX94207.1| translation initiation factor IF3 [Streptococcus sanguinis VMC66] gi|324991555|gb|EGC23488.1| translation initiation factor IF3 [Streptococcus sanguinis SK353] gi|324993916|gb|EGC25835.1| translation initiation factor IF3 [Streptococcus sanguinis SK405] gi|324994765|gb|EGC26678.1| translation initiation factor IF3 [Streptococcus sanguinis SK678] gi|325687204|gb|EGD29226.1| translation initiation factor IF3 [Streptococcus sanguinis SK72] gi|325690865|gb|EGD32866.1| translation initiation factor IF3 [Streptococcus sanguinis SK115] gi|325694910|gb|EGD36815.1| translation initiation factor IF3 [Streptococcus sanguinis SK150] gi|325696067|gb|EGD37958.1| translation initiation factor IF3 [Streptococcus sanguinis SK160] gi|327461073|gb|EGF07406.1| translation initiation factor IF3 [Streptococcus sanguinis SK1057] gi|327463178|gb|EGF09499.1| translation initiation factor IF3 [Streptococcus sanguinis SK1] gi|327470710|gb|EGF16166.1| translation initiation factor IF3 [Streptococcus sanguinis SK330] gi|327474787|gb|EGF20192.1| translation initiation factor IF3 [Streptococcus sanguinis SK408] gi|328946544|gb|EGG40683.1| translation initiation factor IF3 [Streptococcus sanguinis SK1087] gi|332359451|gb|EGJ37271.1| translation initiation factor IF3 [Streptococcus sanguinis SK355] gi|332362512|gb|EGJ40312.1| translation initiation factor IF3 [Streptococcus sanguinis SK1056] gi|332367205|gb|EGJ44941.1| translation initiation factor IF3 [Streptococcus sanguinis SK1059] Length = 176 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G K+K+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 101 GDFDTKLRNARKFLEKGNKIKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 161 DGRQMFMQMAP 171 >gi|309800229|ref|ZP_07694408.1| translation initiation factor IF-3 [Streptococcus infantis SK1302] gi|308116137|gb|EFO53634.1| translation initiation factor IF-3 [Streptococcus infantis SK1302] Length = 185 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFETKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|325263822|ref|ZP_08130555.1| translation initiation factor IF-3 [Clostridium sp. D5] gi|324030860|gb|EGB92142.1| translation initiation factor IF-3 [Clostridium sp. D5] Length = 164 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV+I P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 LKMAMDAELDLVKIAPMAKPPVCKIIDYGKYKYEQTRKDKEAKKKQKTVDLKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H R +L + + +I+ I+ Sbjct: 90 DTNDLNTKVNNAKKFIAKGNKVKVTLRFRGREMAHIQQSRHILDDFAKELLDIAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|88859309|ref|ZP_01133949.1| protein chain initiation factor IF-3 [Pseudoalteromonas tunicata D2] gi|88818326|gb|EAR28141.1| protein chain initiation factor IF-3 [Pseudoalteromonas tunicata D2] Length = 188 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 53 MAEEAGVDLVEISPNAEPPVCKLMDYGKFLFEKSKEQKEQKKKQKQIQIKEIKFRPGTDD 112 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D VKL+++ FL G K KI+V+FRGRE+ HQ++G LL+ IK ++S ++ P + Sbjct: 113 GDYNVKLRSLRKFLEAGDKAKITVRFRGREMAHQEIGITLLNRIKTDLEDVSSLESFPSR 172 Query: 122 FEGRQMIMILS 132 EGRQM+M+L+ Sbjct: 173 VEGRQMVMMLA 183 >gi|322385726|ref|ZP_08059370.1| translation initiation factor IF3 [Streptococcus cristatus ATCC 51100] gi|321270464|gb|EFX53380.1| translation initiation factor IF3 [Streptococcus cristatus ATCC 51100] Length = 176 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 101 GDFDTKLRNARKFLGKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 161 DGRQMFMQMAP 171 >gi|116627860|ref|YP_820479.1| translation initiation factor IF-3 [Streptococcus thermophilus LMD-9] gi|122267543|sp|Q03KI9|IF3_STRTD RecName: Full=Translation initiation factor IF-3 gi|116101137|gb|ABJ66283.1| bacterial translation initiation factor 3 (bIF-3) [Streptococcus thermophilus LMD-9] gi|312278441|gb|ADQ63098.1| translation initiation factor IF-3 [Streptococcus thermophilus ND03] Length = 176 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMNYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|27468273|ref|NP_764910.1| translation initiation factor IF-3 [Staphylococcus epidermidis ATCC 12228] gi|57867163|ref|YP_188818.1| translation initiation factor IF-3 [Staphylococcus epidermidis RP62A] gi|242242944|ref|ZP_04797389.1| translation initiation factor IF-3 [Staphylococcus epidermidis W23144] gi|251811074|ref|ZP_04825547.1| translation initiation factor IF-3 [Staphylococcus epidermidis BCM-HMP0060] gi|282875899|ref|ZP_06284766.1| translation initiation factor IF-3 [Staphylococcus epidermidis SK135] gi|293366371|ref|ZP_06613050.1| translation initiation factor IF3 [Staphylococcus epidermidis M23864:W2(grey)] gi|29427435|sp|Q8CS75|IF3_STAES RecName: Full=Translation initiation factor IF-3 gi|71152152|sp|Q5HNM3|IF3_STAEQ RecName: Full=Translation initiation factor IF-3 gi|27315819|gb|AAO04954.1|AE016748_188 translation initiation factor IF-3 [Staphylococcus epidermidis ATCC 12228] gi|57637821|gb|AAW54609.1| translation initiation factor IF-3 [Staphylococcus epidermidis RP62A] gi|242233545|gb|EES35857.1| translation initiation factor IF-3 [Staphylococcus epidermidis W23144] gi|251805409|gb|EES58066.1| translation initiation factor IF-3 [Staphylococcus epidermidis BCM-HMP0060] gi|281294924|gb|EFA87451.1| translation initiation factor IF-3 [Staphylococcus epidermidis SK135] gi|291319496|gb|EFE59863.1| translation initiation factor IF3 [Staphylococcus epidermidis M23864:W2(grey)] gi|319400996|gb|EFV89215.1| translation initiation factor IF-3 [Staphylococcus epidermidis FRI909] gi|329724673|gb|EGG61179.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU144] gi|329733783|gb|EGG70109.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU045] gi|329737419|gb|EGG73673.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU028] Length = 175 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKELRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|262199907|ref|YP_003271116.1| translation initiation factor IF-3 [Haliangium ochraceum DSM 14365] gi|262083254|gb|ACY19223.1| translation initiation factor IF-3 [Haliangium ochraceum DSM 14365] Length = 177 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKM-RPV 59 +++A+EA LDL+EI++ P VCKI+D K +Y K +++T KEV++ R V Sbjct: 8 LRLAEEAGLDLIEIEAKARPPVCKIMDYGKFKYERSKKKRTQSDAKRTTETKEVRLGRSV 67 Query: 60 -IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD++V+++ FL G +V+I +FRGRE+ H ++G E L + E E ++ Sbjct: 68 KIDDHDIRVRMEQARKFLLGGHRVRIIQRFRGREMAHTEIGFERLQELAEELSEFGKVVA 127 Query: 119 EPKFEGRQMIMIL 131 P+ GRQ+ M L Sbjct: 128 PPRLMGRQLAMEL 140 >gi|224476771|ref|YP_002634377.1| translation initiation factor IF-3 [Staphylococcus carnosus subsp. carnosus TM300] gi|254803492|sp|B9DNC6|IF3_STACT RecName: Full=Translation initiation factor IF-3 gi|222421378|emb|CAL28192.1| translation initiation factor IF-3 [Staphylococcus carnosus subsp. carnosus TM300] Length = 175 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVGLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ P Sbjct: 99 EEHDFQTKLKNGRKFLNKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQRP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|150020815|ref|YP_001306169.1| translation initiation factor IF-3 [Thermosipho melanesiensis BI429] gi|149793336|gb|ABR30784.1| translation initiation factor IF-3 [Thermosipho melanesiensis BI429] Length = 141 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + + P V KI+D K +Y + K +A+K QK +K++K R I Sbjct: 7 LELAYSQKLDLILVAPNAKPPVAKIMDYGKYKYELSKKEKKAKKNQKIIEVKQMKFRIKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I F+ G KV++ + FRGRE+ D G+E+L IKE +I+ ++ +P Sbjct: 67 DEHDYQTKVKHIKRFIESGNKVRVVIMFRGRELAFADKGKEILDRIKEDLRDIAVVEKQP 126 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 127 KLEGRDMWMMLKPK 140 >gi|225630644|ref|YP_002727435.1| translation initiation factor IF-3 [Wolbachia sp. wRi] gi|225592625|gb|ACN95644.1| translation initiation factor IF-3 [Wolbachia sp. wRi] Length = 172 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 99 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 159 KREGNQYFLALVAK 172 >gi|319954102|ref|YP_004165369.1| bacterial translation initiation factor 3 (bif-3) [Cellulophaga algicola DSM 14237] gi|319422762|gb|ADV49871.1| bacterial translation initiation factor 3 (bIF-3) [Cellulophaga algicola DSM 14237] Length = 154 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI + P VCKI D +K Y +K + K +KE++ P Sbjct: 17 LNKAEELELDLVEISPNADPPVCKITDYKKFLYEQKKREKVMKAKATKVIVKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL+DG K+K V F+GR I+++D G LL + ++ +++ P Sbjct: 77 DDHDYEFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLKLASELEDLGKVEQMP 136 Query: 121 KFEGRQMIMILSSKC 135 + EG++M M ++ K Sbjct: 137 RLEGKRMTMFIAPKT 151 >gi|254515028|ref|ZP_05127089.1| translation initiation factor IF-3 [gamma proteobacterium NOR5-3] gi|219677271|gb|EED33636.1| translation initiation factor IF-3 [gamma proteobacterium NOR5-3] Length = 154 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 80/127 (62%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLV I P VCK++D K + +K +KKQK T +KE+K RP + D QV Sbjct: 24 SMDLVLIADQSDPMVCKVMDYGKHIFEAKKQKNAQKKKQKRTQLKEMKFRPGTEEGDYQV 83 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQM Sbjct: 84 KLRNLVRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQM 143 Query: 128 IMILSSK 134 M+++ K Sbjct: 144 TMVIAPK 150 >gi|242373972|ref|ZP_04819546.1| translation initiation factor IF-3 [Staphylococcus epidermidis M23864:W1] gi|242348326|gb|EES39928.1| translation initiation factor IF-3 [Staphylococcus epidermidis M23864:W1] Length = 175 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFVDECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|126663527|ref|ZP_01734524.1| translation initiation factor IF-3 [Flavobacteria bacterium BAL38] gi|126624475|gb|EAZ95166.1| translation initiation factor IF-3 [Flavobacteria bacterium BAL38] Length = 161 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VCK++D K Y +K E + K +KE++ P Sbjct: 25 LRFAEEQEVDLVEISPNAEPPVCKLMDYGKFLYQQKKRDKELKAKSTQIVVKEIRFGPQT 84 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K FL+DG K+K V F+GR I++++ G+ LL + + E +++ P Sbjct: 85 DEHDYEFKKKNALKFLQDGAKLKAFVFFKGRSIIYKEQGQILLLRLAQELEEFGKVEAMP 144 Query: 121 KFEGRQMIMILSSK 134 EG++MIM ++ K Sbjct: 145 VLEGKRMIMYIAPK 158 >gi|167816070|ref|ZP_02447750.1| translation initiation factor IF-3 [Burkholderia pseudomallei 91] Length = 123 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPK 109 >gi|88706033|ref|ZP_01103741.1| translation initiation factor IF-3 [Congregibacter litoralis KT71] gi|88699747|gb|EAQ96858.1| translation initiation factor IF-3 [Congregibacter litoralis KT71] Length = 155 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 79/127 (62%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV I P VCK++D K + +K +KKQK T +KE+K RP + D QV Sbjct: 25 GMDLVLIADQSDPMVCKVMDYGKHIFEAKKQKNAQKKKQKRTQLKEMKFRPGTEEGDYQV 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQM Sbjct: 85 KLRNLVRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQM 144 Query: 128 IMILSSK 134 M+++ K Sbjct: 145 TMVIAPK 151 >gi|58584730|ref|YP_198303.1| translation initiation factor 3, IF-3 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419046|gb|AAW71061.1| Translation initiation factor 3, IF-3 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 169 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQ LDLVE+ P VCKILD K +Y +K A EA+KKQK+ IKE+K+ P I Sbjct: 36 LTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ FL G K+K+++KF+GRE+++ ++G E L + +I++I+ P Sbjct: 96 GDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAP 155 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L++K Sbjct: 156 KREGNQYFLALTTK 169 >gi|58700090|ref|ZP_00374623.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533394|gb|EAL57860.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 144 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 130 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 131 KREGNQYFLALVAK 144 >gi|167582117|ref|ZP_02374991.1| translation initiation factor IF-3 [Burkholderia thailandensis TXDOH] gi|167620275|ref|ZP_02388906.1| translation initiation factor IF-3 [Burkholderia thailandensis Bt4] gi|167719847|ref|ZP_02403083.1| translation initiation factor IF-3 [Burkholderia pseudomallei DM98] gi|167738850|ref|ZP_02411624.1| translation initiation factor IF-3 [Burkholderia pseudomallei 14] gi|167824444|ref|ZP_02455915.1| translation initiation factor IF-3 [Burkholderia pseudomallei 9] gi|167845978|ref|ZP_02471486.1| translation initiation factor IF-3 [Burkholderia pseudomallei B7210] gi|167894555|ref|ZP_02481957.1| translation initiation factor IF-3 [Burkholderia pseudomallei 7894] gi|167902958|ref|ZP_02490163.1| translation initiation factor IF-3 [Burkholderia pseudomallei NCTC 13177] gi|167911195|ref|ZP_02498286.1| translation initiation factor IF-3 [Burkholderia pseudomallei 112] gi|167919219|ref|ZP_02506310.1| translation initiation factor IF-3 [Burkholderia pseudomallei BCC215] Length = 112 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPK 109 >gi|262276750|ref|ZP_06054543.1| translation initiation factor IF-3 [alpha proteobacterium HIMB114] gi|262223853|gb|EEY74312.1| translation initiation factor IF-3 [alpha proteobacterium HIMB114] Length = 167 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/128 (42%), Positives = 82/128 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDL+E+ + P VCKI+D K +Y IQK A +A+KKQK +KE+K+RP D H Sbjct: 37 AKEVGLDLIEVAPNAKPPVCKIIDYGKYKYEIQKKASQAKKKQKVITLKELKLRPSTDKH 96 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K+K F+ G KVK +++F+GRE+ + +L+ I E +IS+++ + K E Sbjct: 97 DYDFKMKNAKKFISKGDKVKFTIRFKGREMDYMKAAYDLVDKIIEDTKDISKVEQKAKME 156 Query: 124 GRQMIMIL 131 GRQM MI+ Sbjct: 157 GRQMTMII 164 >gi|21674936|ref|NP_663001.1| translation initiation factor IF-3 [Chlorobium tepidum TLS] gi|25008622|sp|Q8KAM9|IF3_CHLTE RecName: Full=Translation initiation factor IF-3 gi|21648165|gb|AAM73343.1| translation initiation factor IF-3 [Chlorobium tepidum TLS] Length = 213 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E +DL+E+ + P VCK+ + KL Y + K + +KKQK+T +KE++ P D Sbjct: 46 RMAEERGIDLIEVQPNAQPPVCKLENYGKLIYKMDKKDKDLKKKQKTTSLKELRFHPNTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER ++ D EPK Sbjct: 106 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELADRLTERLSTVANRDGEPK 165 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 166 FEGKKLFVYFEP 177 >gi|167836851|ref|ZP_02463734.1| translation initiation factor IF-3 [Burkholderia thailandensis MSMB43] Length = 112 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLMRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPK 109 >gi|315126514|ref|YP_004068517.1| translation initiation factor IF-3 [Pseudoalteromonas sp. SM9913] gi|315015028|gb|ADT68366.1| translation initiation factor IF-3 [Pseudoalteromonas sp. SM9913] Length = 189 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 54 MADAAGVDLVEISPNAEPPVCKVMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 113 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 114 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKTDLEELAVVESFPNR 173 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 174 VEGRQMVMMMAP 185 >gi|254481779|ref|ZP_05095022.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2148] gi|214037908|gb|EEB78572.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2148] Length = 155 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV I S P+VCK++D K + +K +KKQK T IKE+K RP + D QV Sbjct: 27 GMDLVLIADS-EPAVCKVMDYGKHIFEAKKQKSAQKKKQKRTQIKEMKFRPGTEEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLTRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQL 145 Query: 128 IMILSSK 134 M+++ K Sbjct: 146 TMVIAPK 152 >gi|116074375|ref|ZP_01471637.1| translation initiation factor IF-3 [Synechococcus sp. RS9916] gi|116069680|gb|EAU75432.1| translation initiation factor IF-3 [Synechococcus sp. RS9916] Length = 218 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LSVAQERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|322392247|ref|ZP_08065708.1| translation initiation factor IF3 [Streptococcus peroris ATCC 700780] gi|321144782|gb|EFX40182.1| translation initiation factor IF3 [Streptococcus peroris ATCC 700780] Length = 185 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|312886254|ref|ZP_07745868.1| bacterial translation initiation factor 3 (bIF-3) [Mucilaginibacter paludis DSM 18603] gi|311301279|gb|EFQ78334.1| bacterial translation initiation factor 3 (bIF-3) [Mucilaginibacter paludis DSM 18603] Length = 189 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI + P VCK++D K Y +K E + K T IKE++ P Sbjct: 52 LAIAEQQELDLVEISPNAVPPVCKVVDYNKFIYEQKKKLKEIKSNAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V F+GR I++++ G LL + ++ +++ P Sbjct: 112 DDHDFEFKLKHAIKFLEAGEKVRAYVHFKGRAIVYKEQGEILLLRFAQALEDVGKVEQLP 171 Query: 121 KFEGRQMIMILSSKC 135 K EG++M + ++ K Sbjct: 172 KLEGKRMFLTVTPKV 186 >gi|320335393|ref|YP_004172104.1| translation initiation factor IF-3 [Deinococcus maricopensis DSM 21211] gi|319756682|gb|ADV68439.1| Translation initiation factor IF-3 [Deinococcus maricopensis DSM 21211] Length = 198 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 71/120 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA++ +LDLV + + P VCK++D + RY Q+N E RK+ ++ +K +K R I Sbjct: 37 MAMARQKSLDLVMVGPTAVPPVCKLMDYGRFRYEQQQNEKENRKRARAHEVKAIKFRVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL++G KVK+++ FRGRE H +LG +L + E +I + P Sbjct: 97 DDNDFKTKTNHVRRFLQEGHKVKVTIMFRGRERTHPELGERILHRVAETLADIGAPESTP 156 >gi|148241189|ref|YP_001226346.1| translation initiation factor IF-3 [Synechococcus sp. RCC307] gi|166233786|sp|A5GQ34|IF3_SYNR3 RecName: Full=Translation initiation factor IF-3 gi|147849499|emb|CAK26993.1| Translation initiation factor IF-3 [Synechococcus sp. RCC307] Length = 215 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +LL + + E + + P Sbjct: 107 DAHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAEKLLMRMAKDLEESAEVQQPP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L + Sbjct: 167 KREGRNMIMFLGPR 180 >gi|332534270|ref|ZP_08410114.1| translation initiation factor 3 [Pseudoalteromonas haloplanktis ANT/505] gi|332036266|gb|EGI72738.1| translation initiation factor 3 [Pseudoalteromonas haloplanktis ANT/505] Length = 186 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VC+I+D K + K E +KKQK IKE+K RP D Sbjct: 51 MADAAGVDLVEISPNAEPPVCRIMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 111 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKADLEELAVVESFPNR 170 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 171 VEGRQMVMMMAP 182 >gi|15807081|ref|NP_295810.1| translation initiation factor IF-3 [Deinococcus radiodurans R1] gi|14194841|sp|Q9RSN7|IF3_DEIRA RecName: Full=Translation initiation factor IF-3 gi|6459878|gb|AAF11633.1|AE002044_6 initiation factor 3 [Deinococcus radiodurans R1] Length = 212 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 69/120 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E +LDLV + P VC++LD + RY Q+N E RK+ +S +K +K R I Sbjct: 38 MNMAREKSLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRARSQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL +G KVK+++ FRGRE H +LG +L + E ++ + P Sbjct: 98 DDNDFKTKTGHVRRFLNEGHKVKVTIMFRGRERTHPELGERILVRVAETLADVGAPEGNP 157 >gi|255526048|ref|ZP_05392971.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296187095|ref|ZP_06855493.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|255510234|gb|EET86551.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296048289|gb|EFG87725.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] Length = 200 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I + P VCKI+D K Y K +A+KKQK +KEV++ P I Sbjct: 65 LKMAEEKELDLVMISPNANPPVCKIMDFGKFVYEQAKKDKDAKKKQKVVTLKEVRLSPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K FL G KVK++V+FRGRE + GR++L R ++ I+ Sbjct: 125 EEHDVSIKANNGRKFLVAGDKVKVTVRFRGREADYSFTGRKILDAFYSRLEDVCIIEKHA 184 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 185 KQEGRNMIMILAPK 198 >gi|94985609|ref|YP_604973.1| translation initiation factor IF-3 [Deinococcus geothermalis DSM 11300] gi|122986589|sp|Q1IY80|IF3_DEIGD RecName: Full=Translation initiation factor IF-3 gi|94555890|gb|ABF45804.1| translation initiation factor IF-3 [Deinococcus geothermalis DSM 11300] Length = 204 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 67/120 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLV + P VC++LD + RY Q+N E RK+ ++ +K +K R I Sbjct: 38 LAMAREKGLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRARAQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL +G KVK+++ FRGRE H +LG +L + E +I + P Sbjct: 98 DDHDFNTKTGHVRRFLEEGHKVKVTIMFRGRERTHPELGERILHRVAETLADIGAPEGMP 157 >gi|86606784|ref|YP_475547.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab] gi|86555326|gb|ABD00284.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab] Length = 185 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + P VC+I+D K ++ +K EARKKQ + IKEVK R I Sbjct: 49 LRLAEEKDLDLVLVSDKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V+L++ FL DG KVK +V FRGRE H +LG ELL + + ++ + P Sbjct: 109 GEHDYHVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLQRLFKDLEGVAEMQQPP 168 Query: 121 KFEGRQMIMILSSK 134 + EGR + MILS K Sbjct: 169 QKEGRNITMILSPK 182 >gi|294673347|ref|YP_003573963.1| translation initiation factor IF-3 [Prevotella ruminicola 23] gi|294472015|gb|ADE81404.1| translation initiation factor IF-3 [Prevotella ruminicola 23] Length = 235 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 73/134 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 38 LNQARDMGVDLVEISPNANPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E+ +++ P Sbjct: 98 DEHDYQFKLKHAREFLEEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEVGKVEGMP 157 Query: 121 KFEGRQMIMILSSK 134 EG++M + L+ K Sbjct: 158 SLEGKKMFLYLAPK 171 >gi|14194835|sp|Q9MS97|IF3C_GALSU RecName: Full=Translation initiation factor IF-3, chloroplastic gi|8925953|gb|AAF81685.1|AF233069_8 translation initiation factor IF-3 [Galdieria sulphuraria] Length = 181 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV I+ P V +I+D K ++ +K + EA+KKQ +KE+KMR I Sbjct: 46 LKLAEEKNLDLVLINDKTEPPVVRIIDYGKFKFAQEKKSREAKKKQHQVTVKEIKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QV++ FL+ G KVKIS+ F+GREI + DL +L+ I ++ + Sbjct: 106 EDHDYQVRINQAIKFLKLGNKVKISLTFKGREIQYIDLAEKLIEKIIHSLSSLAEHEKVF 165 Query: 121 KFEGRQM-IMILSSKC 135 EG+ + IM+L K Sbjct: 166 DKEGKNIYIMLLPKKT 181 >gi|22537531|ref|NP_688382.1| translation initiation factor IF-3 [Streptococcus agalactiae 2603V/R] gi|25011496|ref|NP_735891.1| translation initiation factor IF-3 [Streptococcus agalactiae NEM316] gi|76788706|ref|YP_330025.1| translation initiation factor IF-3 [Streptococcus agalactiae A909] gi|76797725|ref|ZP_00779993.1| translation initiation factor IF-3 [Streptococcus agalactiae 18RS21] gi|77407201|ref|ZP_00784175.1| translation initiation factor IF-3 [Streptococcus agalactiae H36B] gi|54037392|sp|P65143|IF3_STRA5 RecName: Full=Translation initiation factor IF-3 gi|54041113|sp|P65142|IF3_STRA3 RecName: Full=Translation initiation factor IF-3 gi|123601579|sp|Q3K0C8|IF3_STRA1 RecName: Full=Translation initiation factor IF-3 gi|22534412|gb|AAN00255.1|AE014255_13 translation initiation factor IF-3 [Streptococcus agalactiae 2603V/R] gi|24413034|emb|CAD47113.1| translation initiation factor IF-3 [Streptococcus agalactiae NEM316] gi|76563763|gb|ABA46347.1| translation initiation factor IF-3 [Streptococcus agalactiae A909] gi|76586949|gb|EAO63439.1| translation initiation factor IF-3 [Streptococcus agalactiae 18RS21] gi|77174192|gb|EAO77087.1| translation initiation factor IF-3 [Streptococcus agalactiae H36B] gi|319745336|gb|EFV97651.1| translation initiation factor IF3 [Streptococcus agalactiae ATCC 13813] Length = 176 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|49483923|ref|YP_041147.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA252] gi|257431096|ref|ZP_05607473.1| infC, translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 68-397] gi|257433779|ref|ZP_05610137.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus E1410] gi|257436695|ref|ZP_05612739.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M876] gi|282904252|ref|ZP_06312140.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C160] gi|282906077|ref|ZP_06313932.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282914477|ref|ZP_06322263.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M899] gi|282919446|ref|ZP_06327181.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C427] gi|282924823|ref|ZP_06332489.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C101] gi|283958432|ref|ZP_06375883.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus A017934/97] gi|293510570|ref|ZP_06669275.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M809] gi|293537112|ref|ZP_06671792.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M1015] gi|56748918|sp|Q6GG25|IF3_STAAR RecName: Full=Translation initiation factor IF-3 gi|49242052|emb|CAG40751.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA252] gi|257278044|gb|EEV08692.1| infC, translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 68-397] gi|257281872|gb|EEV12009.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus E1410] gi|257284046|gb|EEV14169.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M876] gi|282313189|gb|EFB43585.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C101] gi|282317256|gb|EFB47630.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C427] gi|282321658|gb|EFB51983.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M899] gi|282331369|gb|EFB60883.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282595870|gb|EFC00834.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C160] gi|283790581|gb|EFC29398.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus A017934/97] gi|290919957|gb|EFD97025.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M1015] gi|291466461|gb|EFF08982.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M809] gi|315195585|gb|EFU25972.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS00] Length = 175 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILS 132 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLA 170 >gi|77414730|ref|ZP_00790859.1| translation initiation factor IF-3 [Streptococcus agalactiae 515] gi|77159216|gb|EAO70398.1| translation initiation factor IF-3 [Streptococcus agalactiae 515] Length = 187 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 52 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKXQKEQRKKQSVVTVKEVRLSPVIDK 111 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 112 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 171 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 172 DGRQMFMQLAP 182 >gi|77409877|ref|ZP_00786502.1| translation initiation factor IF-3 [Streptococcus agalactiae COH1] gi|77171512|gb|EAO74756.1| translation initiation factor IF-3 [Streptococcus agalactiae COH1] Length = 187 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 52 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 111 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 112 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 171 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 172 DGRQMFMQLAP 182 >gi|116515020|ref|YP_802649.1| hypothetical protein BCc_079 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256874|gb|ABJ90556.1| initiation factor IF-3 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 178 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ DLVEI + P VC+I++ K Y K + +KKQK IKEVK RP Sbjct: 43 LEEAKICGFDLVEISPNSKPPVCRIMNYGKFLYEKSKALKKQKKKQKIIQIKEVKFRPNT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL+ G KVKI+++FRGRE+ HQ++G +L ++ ++ I+ P Sbjct: 103 DKGDYQVKLRNLIRFLKCGNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIESFP 162 Query: 121 K-FEGRQMIMILSSK 134 K EGRQM MILS K Sbjct: 163 KRIEGRQMTMILSPK 177 >gi|293503555|ref|ZP_06667402.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 58-424] gi|295428252|ref|ZP_06820881.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|291095221|gb|EFE25486.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 58-424] gi|295127652|gb|EFG57289.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus EMRSA16] Length = 177 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 41 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 101 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 160 Query: 121 KFEGRQMIMILS 132 K +GRQM ++L+ Sbjct: 161 KMDGRQMFIMLA 172 >gi|21283353|ref|NP_646441.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MW2] gi|49486507|ref|YP_043728.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650552|ref|YP_186565.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus COL] gi|82751269|ref|YP_417010.1| translation initiation factor IF-3 [Staphylococcus aureus RF122] gi|87160953|ref|YP_494322.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221786|ref|YP_001332608.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. Newman] gi|221142569|ref|ZP_03567062.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317176|ref|ZP_04840389.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006465|ref|ZP_05145066.2| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258438249|ref|ZP_05689533.1| translation initiation factor IF-3 [Staphylococcus aureus A9299] gi|258443707|ref|ZP_05692046.1| translation initiation factor IF-3 [Staphylococcus aureus A8115] gi|258445918|ref|ZP_05694094.1| translation initiation factor IF-3 [Staphylococcus aureus A6300] gi|258448401|ref|ZP_05696518.1| translation initiation factor IF-3 [Staphylococcus aureus A6224] gi|258451805|ref|ZP_05699827.1| translation initiation factor IF-3 [Staphylococcus aureus A5948] gi|258454293|ref|ZP_05702262.1| translation initiation factor IF-3 [Staphylococcus aureus A5937] gi|269203299|ref|YP_003282568.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ED98] gi|282893176|ref|ZP_06301410.1| translation initiation factor IF-3 [Staphylococcus aureus A8117] gi|282916940|ref|ZP_06324698.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus D139] gi|282920221|ref|ZP_06327946.1| translation initiation factor IF-3 [Staphylococcus aureus A9765] gi|282927811|ref|ZP_06335422.1| translation initiation factor IF-3 [Staphylococcus aureus A10102] gi|283770745|ref|ZP_06343637.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus H19] gi|284024729|ref|ZP_06379127.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 132] gi|294848702|ref|ZP_06789448.1| translation initiation factor IF-3 [Staphylococcus aureus A9754] gi|295405991|ref|ZP_06815799.1| translation initiation factor IF-3 [Staphylococcus aureus A8819] gi|296274892|ref|ZP_06857399.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MR1] gi|297245083|ref|ZP_06928960.1| translation initiation factor IF-3 [Staphylococcus aureus A8796] gi|54037390|sp|P65140|IF3_STAAN RecName: Full=Translation initiation factor IF-3 gi|54037391|sp|P65141|IF3_STAAW RecName: Full=Translation initiation factor IF-3 gi|54041112|sp|P65139|IF3_STAAM RecName: Full=Translation initiation factor IF-3 gi|56748907|sp|Q6G8P5|IF3_STAAS RecName: Full=Translation initiation factor IF-3 gi|71152151|sp|Q5HF92|IF3_STAAC RecName: Full=Translation initiation factor IF-3 gi|123740967|sp|Q2YTA9|IF3_STAAB RecName: Full=Translation initiation factor IF-3 gi|123749604|sp|Q2FG56|IF3_STAA3 RecName: Full=Translation initiation factor IF-3 gi|172048940|sp|A6QHL4|IF3_STAAE RecName: Full=Translation initiation factor IF-3 gi|21204793|dbj|BAB95489.1| translation initiation factor IF-3 infC [Staphylococcus aureus subsp. aureus MW2] gi|49244950|emb|CAG43411.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284738|gb|AAW36832.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus COL] gi|82656800|emb|CAI81229.1| translation initiation factor IF-3 [Staphylococcus aureus RF122] gi|87126927|gb|ABD21441.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374586|dbj|BAF67846.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. Newman] gi|257848293|gb|EEV72284.1| translation initiation factor IF-3 [Staphylococcus aureus A9299] gi|257851113|gb|EEV75056.1| translation initiation factor IF-3 [Staphylococcus aureus A8115] gi|257855160|gb|EEV78099.1| translation initiation factor IF-3 [Staphylococcus aureus A6300] gi|257858369|gb|EEV81254.1| translation initiation factor IF-3 [Staphylococcus aureus A6224] gi|257860517|gb|EEV83343.1| translation initiation factor IF-3 [Staphylococcus aureus A5948] gi|257863523|gb|EEV86282.1| translation initiation factor IF-3 [Staphylococcus aureus A5937] gi|262075589|gb|ACY11562.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ED98] gi|282319427|gb|EFB49779.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus D139] gi|282590321|gb|EFB95400.1| translation initiation factor IF-3 [Staphylococcus aureus A10102] gi|282594569|gb|EFB99554.1| translation initiation factor IF-3 [Staphylococcus aureus A9765] gi|282764494|gb|EFC04620.1| translation initiation factor IF-3 [Staphylococcus aureus A8117] gi|283460892|gb|EFC07982.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus H19] gi|294824728|gb|EFG41151.1| translation initiation factor IF-3 [Staphylococcus aureus A9754] gi|294968988|gb|EFG45009.1| translation initiation factor IF-3 [Staphylococcus aureus A8819] gi|297178163|gb|EFH37411.1| translation initiation factor IF-3 [Staphylococcus aureus A8796] gi|298694951|gb|ADI98173.1| Translation initiation factor 3 [Staphylococcus aureus subsp. aureus ED133] gi|302333346|gb|ADL23539.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751507|gb|ADL65684.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312830059|emb|CBX34901.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130686|gb|EFT86672.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS03] gi|315198623|gb|EFU28951.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS01] gi|323440775|gb|EGA98484.1| translation initiation factor IF-3 [Staphylococcus aureus O11] gi|323442930|gb|EGB00553.1| translation initiation factor IF-3 [Staphylococcus aureus O46] gi|329314353|gb|AEB88766.1| Translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus T0131] gi|329727496|gb|EGG63952.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21172] gi|329728418|gb|EGG64855.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21189] gi|329733254|gb|EGG69591.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21193] Length = 175 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLAP 171 >gi|262341224|ref|YP_003284079.1| translation initiation factor IF-3 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272561|gb|ACY40469.1| translation initiation factor IF-3 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 174 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+E LDLVEI+ + P VCKILD +K Y +K + + KQ KE++ P I Sbjct: 39 LQFARERELDLVEINPKLDPPVCKILDYKKFLYEQKKRKKQFKAKQIKVNTKEIRFGPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +VK+K+ + FL G KVK+ V F+GR I+++D G+ L E E +++ P Sbjct: 99 GDHDGKVKIKSAEKFLMRGDKVKVFVFFKGRSIVYKDQGKIKLLKFAEEIEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSK 134 EG++M MIL+ K Sbjct: 159 VMEGKRMYMILAPK 172 >gi|257428462|ref|ZP_05604860.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 65-1322] gi|282908992|ref|ZP_06316810.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911308|ref|ZP_06319110.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WBG10049] gi|297590785|ref|ZP_06949423.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus MN8] gi|257275303|gb|EEV06790.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 65-1322] gi|282325003|gb|EFB55313.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327256|gb|EFB57551.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|297575671|gb|EFH94387.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus MN8] gi|312437861|gb|ADQ76932.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH60] Length = 186 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILS 132 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLA 181 >gi|322388183|ref|ZP_08061787.1| translation initiation factor IF3 [Streptococcus infantis ATCC 700779] gi|321140855|gb|EFX36356.1| translation initiation factor IF3 [Streptococcus infantis ATCC 700779] Length = 185 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 81/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL++ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRSARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|228469291|ref|ZP_04054317.1| translation initiation factor IF-3 [Porphyromonas uenonis 60-3] gi|228309190|gb|EEK17792.1| translation initiation factor IF-3 [Porphyromonas uenonis 60-3] Length = 209 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ LDLVEI + P VC++ D +K Y +K E + KQ +KE++ P D Sbjct: 47 RIAELQGLDLVEISPNAEPPVCRVTDYQKFLYQQKKRQKEQKAKQAKVVVKEIRFGPQTD 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KL+ +GFL+DG KVK V FRGR I+ +D G LL E++R++ P Sbjct: 107 DHDYNFKLRHAEGFLKDGFKVKAYVFFRGRSILFKDQGEILLLRFANDLEELARVESMPV 166 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 167 LEGKRMTIMLAPKPA 181 >gi|148268161|ref|YP_001247104.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH9] gi|150394228|ref|YP_001316903.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH1] gi|147741230|gb|ABQ49528.1| bacterial translation initiation factor 3 (bIF-3) [Staphylococcus aureus subsp. aureus JH9] gi|149946680|gb|ABR52616.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH1] Length = 200 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 64 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 124 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 183 Query: 121 KFEGRQMIMILS 132 K +GRQM ++L+ Sbjct: 184 KMDGRQMFIMLA 195 >gi|15924670|ref|NP_372204.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50] gi|15927259|ref|NP_374792.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus N315] gi|156979998|ref|YP_001442257.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu3] gi|262052252|ref|ZP_06024457.1| translation initiation factor IF-3 infC [Staphylococcus aureus 930918-3] gi|13701477|dbj|BAB42771.1| translation initiation factor IF-3 infC [Staphylococcus aureus subsp. aureus N315] gi|14247452|dbj|BAB57842.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50] gi|156722133|dbj|BAF78550.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu3] gi|259159853|gb|EEW44892.1| translation initiation factor IF-3 infC [Staphylococcus aureus 930918-3] gi|285817364|gb|ADC37851.1| Translation initiation factor IF-3 [Staphylococcus aureus 04-02981] Length = 172 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 36 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 96 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 155 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 156 KMDGRQMFIMLAP 168 >gi|253732332|ref|ZP_04866497.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734535|ref|ZP_04868700.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TCH130] gi|257794066|ref|ZP_05643045.1| translation initiation factor IF-3 [Staphylococcus aureus A9781] gi|258415770|ref|ZP_05682041.1| translation initiation factor IF-3 [Staphylococcus aureus A9763] gi|258421993|ref|ZP_05684913.1| translation initiation factor IF-3 [Staphylococcus aureus A9719] gi|297207606|ref|ZP_06924041.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911688|ref|ZP_07129132.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH70] gi|304380728|ref|ZP_07363397.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253723932|gb|EES92661.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727476|gb|EES96205.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TCH130] gi|257788038|gb|EEV26378.1| translation initiation factor IF-3 [Staphylococcus aureus A9781] gi|257839363|gb|EEV63836.1| translation initiation factor IF-3 [Staphylococcus aureus A9763] gi|257842037|gb|EEV66466.1| translation initiation factor IF-3 [Staphylococcus aureus A9719] gi|269941161|emb|CBI49548.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TW20] gi|283470948|emb|CAQ50159.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ST398] gi|296887623|gb|EFH26521.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887109|gb|EFK82310.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH70] gi|304340727|gb|EFM06658.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140441|gb|EFW32295.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143979|gb|EFW35748.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA177] Length = 186 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLAP 182 >gi|123967058|ref|YP_001012139.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9515] gi|166198965|sp|A2BZ21|IF3_PROM5 RecName: Full=Translation initiation factor IF-3 gi|123201424|gb|ABM73032.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9515] Length = 195 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + P Sbjct: 107 DKHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQRP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPR 180 >gi|258424097|ref|ZP_05686979.1| translation initiation factor IF-3 [Staphylococcus aureus A9635] gi|257845718|gb|EEV69750.1| translation initiation factor IF-3 [Staphylococcus aureus A9635] Length = 186 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILS 132 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLA 181 >gi|77360340|ref|YP_339915.1| translation initiation factor IF-3 [Pseudoalteromonas haloplanktis TAC125] gi|123589504|sp|Q3IL80|IF3_PSEHT RecName: Full=Translation initiation factor IF-3 gi|76875251|emb|CAI86472.1| protein chain initiation factor IF-3 [Pseudoalteromonas haloplanktis TAC125] Length = 181 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VC+I+D K + K E +KKQK IKE+K RP D Sbjct: 46 MADAAGVDLVEISPNAEPPVCRIMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 105 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 106 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKGDLEELAVVESFPNR 165 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 166 VEGRQMVMMMAP 177 >gi|46580941|ref|YP_011749.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. Hildenborough] gi|120601758|ref|YP_966158.1| translation initiation factor IF-3 [Desulfovibrio vulgaris DP4] gi|61213119|sp|Q728R6|IF3_DESVH RecName: Full=Translation initiation factor IF-3 gi|166198957|sp|A1VBB5|IF3_DESVV RecName: Full=Translation initiation factor IF-3 gi|46450361|gb|AAS97009.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. Hildenborough] gi|120561987|gb|ABM27731.1| bacterial translation initiation factor 3 (bIF-3) [Desulfovibrio vulgaris DP4] gi|311234631|gb|ADP87485.1| translation initiation factor IF-3 [Desulfovibrio vulgaris RCH1] Length = 176 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVE+ ++ P VC+++D K +Y QK EA+K+Q IKE+K+RP Sbjct: 40 IALAKEKGLDLVEVAATADPPVCRVMDYGKYKYEQQKKKQEAKKRQTVVQIKEIKVRPKT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK + FL +G + K++V FRGREI+H+D G +L E +++++D E Sbjct: 100 DEHDYQTKLKHVRRFLEEGDRCKVTVFFRGREIVHKDRGLTILDRFVEDTKDLAKLDQEA 159 Query: 121 KFEGRQMIMILSS 133 + EGR + M+L+ Sbjct: 160 RAEGRTLQMMLAP 172 >gi|88195487|ref|YP_500291.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|123098027|sp|Q2FXP9|IF3_STAA8 RecName: Full=Translation initiation factor IF-3 gi|87203045|gb|ABD30855.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 175 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LKMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLAP 171 >gi|42520790|ref|NP_966705.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|99035130|ref|ZP_01314913.1| hypothetical protein Wendoof_01000243 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225631348|ref|ZP_03788018.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|42410530|gb|AAS14639.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225590953|gb|EEH12165.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 172 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LEFAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 99 GDHDYGTKLRQARDLLAHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 159 KREGNQYFLALVAK 172 >gi|148358549|ref|YP_001249756.1| translational initiation factor IF-3 [Legionella pneumophila str. Corby] gi|148280322|gb|ABQ54410.1| translational initiation factor IF-3 [Legionella pneumophila str. Corby] Length = 129 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/126 (42%), Positives = 83/126 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EA+KKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEAKKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLL 120 Query: 129 MILSSK 134 M+LS K Sbjct: 121 MVLSPK 126 >gi|213027934|ref|ZP_03342381.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 138 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/120 (42%), Positives = 79/120 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 134 >gi|289550563|ref|YP_003471467.1| Translation initiation factor 3 [Staphylococcus lugdunensis HKU09-01] gi|315658057|ref|ZP_07910930.1| translation initiation factor IF3 [Staphylococcus lugdunensis M23590] gi|289180095|gb|ADC87340.1| Translation initiation factor 3 [Staphylococcus lugdunensis HKU09-01] gi|315496947|gb|EFU85269.1| translation initiation factor IF3 [Staphylococcus lugdunensis M23590] Length = 184 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 48 LEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 108 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 167 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 168 KMDGRQMFIMLAP 180 >gi|289422399|ref|ZP_06424245.1| translation initiation factor IF-3 [Peptostreptococcus anaerobius 653-L] gi|289157234|gb|EFD05853.1| translation initiation factor IF-3 [Peptostreptococcus anaerobius 653-L] Length = 135 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA + NLDL I + P VC+I+D K RY + EA+KKQK +KEV++RP I Sbjct: 1 MEMAAKKNLDLAMISPNAEPPVCRIMDYGKFRYEQARKEKEAKKKQKVVVVKEVRLRPGI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL+ K FL+ G KVK+ ++FRGRE+ H+D+G+E++ E E + P Sbjct: 61 GDNDLKTKSNNAIKFLQKGDKVKVELRFRGRELGHKDIGKEVMMKFIELVSEFGEPNKAP 120 Query: 121 KFEGRQMIMILSSK 134 KFEG M++I+ K Sbjct: 121 KFEGNNMVVIIDPK 134 >gi|116071706|ref|ZP_01468974.1| translation initiation factor IF-3 [Synechococcus sp. BL107] gi|116065329|gb|EAU71087.1| translation initiation factor IF-3 [Synechococcus sp. BL107] Length = 217 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DSHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEKAEIQQSP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|15895628|ref|NP_348977.1| translation initiation factor IF-3 [Clostridium acetobutylicum ATCC 824] gi|20138499|sp|Q97GK5|IF3_CLOAB RecName: Full=Translation initiation factor IF-3 gi|15025372|gb|AAK80317.1|AE007736_7 Translation initiation factor IF3 [Clostridium acetobutylicum ATCC 824] gi|325509776|gb|ADZ21412.1| translation initiation factor IF-3 [Clostridium acetobutylicum EA 2018] Length = 175 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P VCKI+D K Y K E +K QK +KEV++ I Sbjct: 40 LKLAEEKELDLVAMSPNAVPPVCKIMDFGKFVYEQTKKEKENKKNQKIVNVKEVRLSASI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+Q+K FL G KVK++V+FRGR+ + GR++L N E+ ++ I+ Sbjct: 100 EEHDVQIKSNNARKFLIAGDKVKVAVRFRGRQTDYAFKGRKILDNFFEKINDVGVIEKPA 159 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 160 KLEGKNMIMILAPK 173 >gi|269123270|ref|YP_003305847.1| translation initiation factor IF-3 [Streptobacillus moniliformis DSM 12112] gi|268314596|gb|ACZ00970.1| translation initiation factor IF-3 [Streptobacillus moniliformis DSM 12112] Length = 177 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +AQE NLDLVE+ SS SVCKI+D K RY K E +K+QK+T IKE++++P ID Sbjct: 44 NIAQEKNLDLVEMSSSNGVSVCKIMDYGKYRYEKIKKDKENKKRQKNTVIKEIRVKPHID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD++ K+ ID FL KVKIS++ GRE +H + ++L F + + ++ + Sbjct: 104 THDMETKINQIDKFLEKENKVKISLRLSGREKLHSETAIKVLDEFANVFEDKAIVEKKYG 163 Query: 122 FEGRQMIMILSSK 134 E Q ++LS K Sbjct: 164 REQVQKFVMLSPK 176 >gi|113953559|ref|YP_729327.1| translation initiation factor IF-3 [Synechococcus sp. CC9311] gi|123328048|sp|Q0IDZ5|IF3_SYNS3 RecName: Full=Translation initiation factor IF-3 gi|113880910|gb|ABI45868.1| translation initiation factor IF-3 [Synechococcus sp. CC9311] Length = 212 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|55823056|ref|YP_141497.1| translation initiation factor IF-3 [Streptococcus thermophilus CNRZ1066] gi|81676558|sp|Q5LZL7|IF3_STRT1 RecName: Full=Translation initiation factor IF-3 gi|55739041|gb|AAV62682.1| translation initiation factor IF-3 [Streptococcus thermophilus CNRZ1066] Length = 176 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMNYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|332521037|ref|ZP_08397495.1| translation initiation factor IF-3 [Lacinutrix algicola 5H-3-7-4] gi|332043130|gb|EGI79327.1| translation initiation factor IF-3 [Lacinutrix algicola 5H-3-7-4] Length = 153 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVEI P VCKI+D +K Y +K + K IKE++ P Sbjct: 19 LAIAEEQELDLVEISPKADPPVCKIMDYKKFLYEQKKRDKALKSKATKVVIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ P Sbjct: 79 DDHDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEELGKVEQMP 138 Query: 121 KFEGRQMIMILSSK 134 + EG++M M ++ K Sbjct: 139 RLEGKRMTMFIAPK 152 >gi|39939230|ref|NP_950996.1| translation initiation factor IF3 [Onion yellows phytoplasma OY-M] gi|39722339|dbj|BAD04829.1| translation initiation factor IF3 [Onion yellows phytoplasma OY-M] Length = 150 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++ +D+V +++ +P V ++++ +K RY QK EA+KK + +KE+++ P I Sbjct: 16 LKLSEQKEIDIVVVNADASPMVARLMNYQKHRYNQQKKLREAKKKTQIIVLKEIRLNPTI 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+K FL+ G KVK+S++FRGR I + LG + + + +S+I+ Sbjct: 76 DKNDLNTKIKQAQKFLKQGDKVKVSMRFRGRMINNFQLGETVFKQVMQDLKNLSQIETPL 135 Query: 121 KFEGRQMIMILS 132 K +G Q+ +LS Sbjct: 136 KLQGNQLTAVLS 147 >gi|88803833|ref|ZP_01119356.1| translation initiation factor IF-3 [Polaribacter irgensii 23-P] gi|88780361|gb|EAR11543.1| translation initiation factor IF-3 [Polaribacter irgensii 23-P] Length = 152 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +AQE LDLVEI P VCKI+D +K Y +K + K +KE++ P Sbjct: 18 MAIAQE--LDLVEISPKAKPPVCKIIDYKKFLYEQKKREKSLKSKATKVIVKEIRFGPQT 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ P Sbjct: 76 DEHDYEFKKKHALKFLQEGAKLKAFVFFKGRSIIFKEQGQILLLKLAQELEEVGKVEQLP 135 Query: 121 KFEGRQMIMILSSK 134 K EG++MIM ++ K Sbjct: 136 KLEGKRMIMFIAPK 149 >gi|27365717|ref|NP_761245.1| translation initiation factor 3 [Vibrio vulnificus CMCP6] gi|37680128|ref|NP_934737.1| translation initiation factor 3 [Vibrio vulnificus YJ016] gi|320156123|ref|YP_004188502.1| translation initiation factor 3 [Vibrio vulnificus MO6-24/O] gi|27361866|gb|AAO10772.1| Translation initiation factor 3 [Vibrio vulnificus CMCP6] gi|37198874|dbj|BAC94708.1| translation initiation factor 3 [Vibrio vulnificus YJ016] gi|319931435|gb|ADV86299.1| translation initiation factor 3 [Vibrio vulnificus MO6-24/O] Length = 129 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/127 (44%), Positives = 83/127 (65%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L +K E + ++ P K EGRQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQEIGVDVLERLKVDTVEHAVVESFPTKIEGRQM 120 Query: 128 IMILSSK 134 IM+L+ K Sbjct: 121 IMVLAPK 127 >gi|33864629|ref|NP_896188.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102] gi|39931219|sp|Q7UA08|IF3_SYNPX RecName: Full=Translation initiation factor IF-3 gi|33632152|emb|CAE06608.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102] Length = 217 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|55821145|ref|YP_139587.1| translation initiation factor IF-3 [Streptococcus thermophilus LMG 18311] gi|81676709|sp|Q5M470|IF3_STRT2 RecName: Full=Translation initiation factor IF-3 gi|55737130|gb|AAV60772.1| translation initiation factor IF-3 [Streptococcus thermophilus LMG 18311] Length = 176 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVIIQPQATPPVAKIMNYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|300870145|ref|YP_003785016.1| translation initiation factor IF-3 [Brachyspira pilosicoli 95/1000] gi|300687844|gb|ADK30515.1| translation initiation factor IF-3 [Brachyspira pilosicoli 95/1000] Length = 196 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 84/132 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P VCKI++ K ++ IQK + EA+KKQKS +KE+KMRP I Sbjct: 39 LALAKEEGSDLVEIVPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKSVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLDEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEASTEKPA 158 Query: 121 KFEGRQMIMILS 132 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLN 170 >gi|260911582|ref|ZP_05918167.1| translation initiation factor IF3 [Prevotella sp. oral taxon 472 str. F0295] gi|260634288|gb|EEX52393.1| translation initiation factor IF3 [Prevotella sp. oral taxon 472 str. F0295] Length = 223 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + P VC+I+D K Y +K+A E + KQ +KE++ P Sbjct: 38 LDMARSQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHAKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYNFKLKHAKEFLDAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSK 134 EG++M + ++ K Sbjct: 158 ALEGKKMFLYIAPK 171 >gi|296127838|ref|YP_003635090.1| translation initiation factor IF-3 [Brachyspira murdochii DSM 12563] gi|296019654|gb|ADG72891.1| translation initiation factor IF-3 [Brachyspira murdochii DSM 12563] Length = 192 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P VCKI++ K ++ IQK + EA+KKQK +KE+KMRP I Sbjct: 39 LALAKEEGSDLVEIVPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKLVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLEEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEAATEKPA 158 Query: 121 KFEGRQMIMILS 132 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLN 170 >gi|85711635|ref|ZP_01042692.1| Translation initiation factor 3 [Idiomarina baltica OS145] gi|85694495|gb|EAQ32436.1| Translation initiation factor 3 [Idiomarina baltica OS145] Length = 124 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 + + P VC+++D K Y K+ E +KKQK +KEVK RP D D QVKL+ + Sbjct: 1 MSPNAEPPVCRLMDYGKFLYEKSKDQKEQKKKQKQIQVKEVKFRPGTDEGDYQVKLRNLR 60 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILS 132 FL G K K++++FRGRE+ HQ+LG ELL+ IK+ EIS ++ P + EGRQMIM+L+ Sbjct: 61 RFLEGGDKTKVTIRFRGREMAHQELGIELLTRIKDDLDEISTVESFPRRAEGRQMIMVLA 120 Query: 133 S 133 Sbjct: 121 P 121 >gi|254282514|ref|ZP_04957482.1| translation initiation factor IF-3 [gamma proteobacterium NOR51-B] gi|219678717|gb|EED35066.1| translation initiation factor IF-3 [gamma proteobacterium NOR51-B] Length = 155 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 1/127 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV + S TP VCKI+D K + +K RKK K +KE+K RP D D QV Sbjct: 27 GMDLVMMADS-TPPVCKIMDYGKHVFEAKKQKAAQRKKAKRIQVKEMKFRPGTDEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K+++++RGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLVRFLENGDKAKVTLRYRGREMAHQEIGMELLKRVENDLSELGSVEQFPKMEGRQL 145 Query: 128 IMILSSK 134 M+++ K Sbjct: 146 TMVIAPK 152 >gi|313674625|ref|YP_004052621.1| bacterial translation initiation factor 3 (bif-3) [Marivirga tractuosa DSM 4126] gi|312941323|gb|ADR20513.1| bacterial translation initiation factor 3 (bIF-3) [Marivirga tractuosa DSM 4126] Length = 182 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLVEI P VCKI+D K +Y +K E + K + T IKE++ P Sbjct: 46 LRMAEEQNLDLVEISPKADPPVCKIIDYSKFKYEQKKKQKEIKAKAQKTVIKEIRFGPNT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KL FL+DG KVK V F GR I+ +D G LL ++ +++ P Sbjct: 106 DDHDFEFKLNHAKKFLKDGAKVKAYVHFVGRTIVFKDRGELLLLRFASELEDLGKVEQMP 165 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 166 KLEGKRMTLFITPK 179 >gi|323464240|gb|ADX76393.1| translation initiation factor IF-3 [Staphylococcus pseudintermedius ED99] Length = 175 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA LD+V + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMADRLGLDVVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL G KVK+S++FRGR I H+++G+ +L E +++ I+ +P Sbjct: 99 EEHDFNTKLKNGRKFLTKGDKVKVSIRFRGRAITHKEIGQRVLERYAEACQDLATIEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFLMLAP 171 >gi|288928014|ref|ZP_06421861.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 317 str. F0108] gi|288330848|gb|EFC69432.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 317 str. F0108] Length = 223 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + P VC+I+D K Y +K+A E + KQ +KE++ P Sbjct: 38 LDMARSQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHAKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYNFKLKHAKEFLDAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSK 134 EG++M + ++ K Sbjct: 158 ALEGKKMFLYIAPK 171 >gi|319946723|ref|ZP_08020957.1| translation initiation factor IF3 [Streptococcus australis ATCC 700641] gi|319746771|gb|EFV99030.1| translation initiation factor IF3 [Streptococcus australis ATCC 700641] Length = 185 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|58699833|ref|ZP_00374452.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533651|gb|EAL58031.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 143 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 130 Query: 121 KFEGRQMIMILSSKC 135 K EG Q SS C Sbjct: 131 KREGNQ--YFFSSGC 143 >gi|319892727|ref|YP_004149602.1| Translation initiation factor 3 [Staphylococcus pseudintermedius HKU10-03] gi|317162423|gb|ADV05966.1| Translation initiation factor 3 [Staphylococcus pseudintermedius HKU10-03] Length = 177 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA LD+V + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 41 LEMADRLGLDVVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKIINVKEIRLSPTI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL G KVK+S++FRGR I H+++G+ +L E +++ I+ +P Sbjct: 101 EEHDFNTKLKNGRKFLTKGDKVKVSIRFRGRAITHKEIGQRVLERYAEACQDLATIEQKP 160 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 161 KMEGRQMFLMLAP 173 >gi|163784104|ref|ZP_02179052.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] gi|159880632|gb|EDP74188.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] Length = 139 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 85/133 (63%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRP 58 M++A++ NLDLVEI P VCKI+D K ++ +K EA+KKQ++ +KE+K Sbjct: 1 MRIAEDRNLDLVEISPKANPPVCKIMDYGKYKFEQKKKEKEAKKKQRAHMQHVKEMKFGL 60 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I+ HD + K+K I FL DG KVK+ + FRGRE +H ++G++L I E E+ +++ Sbjct: 61 KIEKHDYETKVKHIREFLEDGDKVKVIIMFRGRENVHPEIGQQLAERIIEDVKEVGKVEK 120 Query: 119 EPKFEGRQMIMIL 131 +PK EGR MI L Sbjct: 121 QPKKEGRNMIFTL 133 >gi|257440572|ref|ZP_05616327.1| translation initiation factor IF-3 [Faecalibacterium prausnitzii A2-165] gi|257196895|gb|EEU95179.1| translation initiation factor IF-3 [Faecalibacterium prausnitzii A2-165] Length = 183 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA LDLV+I TP VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 47 MRAAEEAGLDLVKIAPQATPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK S++FRGRE+ H LG ++L E + S +D P Sbjct: 107 DTNDFNTKLNQTAKFLAAGHKVKASIRFRGREMAHSALGADVLKRFAEALPQAS-MDKPP 165 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 166 VLEGRTMSILLIPK 179 >gi|168701960|ref|ZP_02734237.1| translation initiation factor IF-3 [Gemmata obscuriglobus UQM 2246] Length = 203 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 3/135 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVE+ P VCKI+D K +Y K + + +QK +KE+++RP Sbjct: 29 LEMAREAGLDLVEVADREKPPVCKIMDYGKFKYAQSKKSHQKTHQQK---LKEIRVRPKT 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KV+++V FRGRE+ H + G+ +++ + E +++ Sbjct: 86 GDHDIETKIKQAKMFLEHNDKVQVNVLFRGREMQHIEEGQRVMNQVLEALVNDCKLEMPA 145 Query: 121 KFEGRQMIMILSSKC 135 K EG++M+ +L+ K Sbjct: 146 KMEGKRMVALLAPKA 160 >gi|218259670|ref|ZP_03475319.1| hypothetical protein PRABACTJOHN_00978 [Parabacteroides johnsonii DSM 18315] gi|218224963|gb|EEC97613.1| hypothetical protein PRABACTJOHN_00978 [Parabacteroides johnsonii DSM 18315] Length = 204 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI + P VC+I D +K Y +K E + K +KE++ P Sbjct: 39 LKMAEDQGLDLVEISPNAAPPVCRITDYQKFLYQQKKRQKEQKAKSVKVIVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQLP 158 Query: 121 KFEGRQMIMILSSK 134 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPK 172 >gi|296876708|ref|ZP_06900756.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 15912] gi|322389274|ref|ZP_08062834.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 903] gi|296432210|gb|EFH18009.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 15912] gi|321144018|gb|EFX39436.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 903] Length = 185 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|154490251|ref|ZP_02030512.1| hypothetical protein PARMER_00483 [Parabacteroides merdae ATCC 43184] gi|154089143|gb|EDN88187.1| hypothetical protein PARMER_00483 [Parabacteroides merdae ATCC 43184] Length = 204 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI + P VC+I D +K Y +K E + K +KE++ P Sbjct: 39 LKMAEDQGLDLVEISPNAAPPVCRITDYQKFLYQQKKRQKEQKAKSVKVIVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQLP 158 Query: 121 KFEGRQMIMILSSK 134 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPK 172 >gi|87123250|ref|ZP_01079101.1| translation initiation factor [Synechococcus sp. RS9917] gi|86168970|gb|EAQ70226.1| translation initiation factor [Synechococcus sp. RS9917] Length = 220 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKDRELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQATRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|152996609|ref|YP_001341444.1| translation initiation factor IF-3 [Marinomonas sp. MWYL1] gi|150837533|gb|ABR71509.1| translation initiation factor IF-3 [Marinomonas sp. MWYL1] Length = 177 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLV+I S P VCKI+D K + +K +K K +KE+K RP Sbjct: 42 LKAAQEATLDLVQIADS-DPIVCKIMDYGKHIFEAKKAKAAQKKNAKQIQVKEMKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K+S+++RGRE+ HQ+LG +L++ + + ++ Sbjct: 101 EEGDYQVKLRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMNRVAADLEDYGVVEQAA 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQ+ M+L K Sbjct: 161 KMEGRQLTMVLGPK 174 >gi|78183715|ref|YP_376149.1| translation initiation factor IF-3 [Synechococcus sp. CC9902] gi|123743576|sp|Q3B0M2|IF3_SYNS9 RecName: Full=Translation initiation factor IF-3 gi|78168009|gb|ABB25106.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus sp. CC9902] Length = 217 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVSKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DSHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEKAEIQQSP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|312867797|ref|ZP_07728003.1| translation initiation factor IF-3 [Streptococcus parasanguinis F0405] gi|311096860|gb|EFQ55098.1| translation initiation factor IF-3 [Streptococcus parasanguinis F0405] Length = 176 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQRAKM 160 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 161 DGRQMFMQLAPAT 173 >gi|237668334|ref|ZP_04528318.1| translation initiation factor IF-3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656682|gb|EEP54238.1| translation initiation factor IF-3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 173 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCK++D K Y K EA+KKQK IKE+++ I+ Sbjct: 39 RLADENELDLVMISPNAKPPVCKVMDYGKFVYEQSKKEKEAKKKQKVISIKEIRVSLTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ +K K FL DG KVKI+V+FRGRE+ +G +L+N + ++S I+ PK Sbjct: 99 EHDIDIKAKNARKFLLDGDKVKITVRFRGREMELGHIGERILNNFTAKLEDVSIIEKRPK 158 Query: 122 FEGRQMIMILSSK 134 EGR M ++L K Sbjct: 159 REGRSMTLVLGPK 171 >gi|120434968|ref|YP_860654.1| translation initiation factor IF-3 [Gramella forsetii KT0803] gi|117577118|emb|CAL65587.1| translation initiation factor IF-3 [Gramella forsetii KT0803] Length = 147 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 73/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLVEI + P V K +D +K Y +K + K +KE++ P Sbjct: 10 LSIAQELGLDLVEISPNAKPPVVKAMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL+DG K+K V F+GR I+ +D G LL + + E +++ P Sbjct: 70 DDHDYEFKKRNAEKFLKDGAKLKAFVFFKGRSIVFKDKGEILLLRLAQDLEEHGKVEQMP 129 Query: 121 KFEGRQMIMILSS 133 K EG++M M LS Sbjct: 130 KLEGKRMTMFLSP 142 >gi|218134265|ref|ZP_03463069.1| hypothetical protein BACPEC_02158 [Bacteroides pectinophilus ATCC 43243] gi|217991640|gb|EEC57646.1| hypothetical protein BACPEC_02158 [Bacteroides pectinophilus ATCC 43243] Length = 164 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLV+ + P VCK+++ K +Y K EA+KKQK IKEV++ P I Sbjct: 30 LKIAKEQGVDLVKFVPNANPPVCKLVNYSKFKYEQAKREKEAKKKQKVVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G +VK++++FRGRE+ H + + +L ++ +++ ++ P Sbjct: 90 DANDLNTKISAARKFLEKGNRVKVTLRFRGREMAHVEASKHILIEFAQKLEDVAVVEKLP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 150 KLEGRSMTMFLTEK 163 >gi|308802129|ref|XP_003078378.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] gi|116056830|emb|CAL53119.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] Length = 266 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 83/134 (61%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +++A E LDLV + + P V +I++ K +Y +K+A EARKK +T +KE+KMR Sbjct: 121 LEIAAERELDLVVMSADANPPVARIMNYSKFKYEQEKSAREARKKAAATRVDLKELKMRY 180 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD +V+L++ FL G KVK+ +FRGRE +++GRE+ + E GE+ ++ Sbjct: 181 NIDTHDYEVRLRSALKFLEGGDKVKVICQFRGRENDFREIGREMFARFVEDIGEVGVLEN 240 Query: 119 EPKFEGRQMIMILS 132 P EG M MI+S Sbjct: 241 RPNMEGNSMTMIIS 254 >gi|87122883|ref|ZP_01078751.1| translation initiation factor [Marinomonas sp. MED121] gi|86161834|gb|EAQ63131.1| translation initiation factor [Marinomonas sp. MED121] Length = 177 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLV+I S P VCK++D K + +K +K K +KE+K RP + D QVK Sbjct: 50 LDLVQIADS-DPVVCKVMDYGKHIFEQKKAKAAQKKNAKQIQVKEIKFRPGTEEGDYQVK 108 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G K K+S+++RGRE+ HQ+LG +L+ + E GE ++ K EGRQ+ Sbjct: 109 LRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMHRVAEDLGEYGVVEQAAKMEGRQLT 168 Query: 129 MILSSK 134 M+L+ K Sbjct: 169 MVLAPK 174 >gi|119472428|ref|ZP_01614546.1| translation initiation factor IF-3 [Alteromonadales bacterium TW-7] gi|119444950|gb|EAW26248.1| translation initiation factor IF-3 [Alteromonadales bacterium TW-7] Length = 186 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 51 MADAAGVDLVEISPNAEPPVCKVMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ +K +++ ++ P + Sbjct: 111 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRVKGDLEDLAVVESFPNR 170 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 171 VEGRQMVMMMAP 182 >gi|119487595|ref|ZP_01621205.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] gi|119455764|gb|EAW36900.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] Length = 178 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + + P VC+ILD K +Y K+ R+ KS +KE+KMR I Sbjct: 44 LSIAQEKELDLVLVSDTANPPVCRILDYGKYKYQQLKSKENNRQSSKSQ-LKELKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++ FL+ G VK +V RGRE +H L ++LL + E ++I P Sbjct: 103 EDHDYSVRVNHAKRFLKSGNPVKATVTMRGRENLHGGLAKDLLDRMATDLEEFAQIQQSP 162 Query: 121 KFEGRQMIMILSSK 134 K EG ++ M+L+ + Sbjct: 163 KREGSRITMLLTPR 176 >gi|303271103|ref|XP_003054913.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462887|gb|EEH60165.1| predicted protein [Micromonas pusilla CCMP1545] Length = 175 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 5/137 (3%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRPV 59 ++A EA LDLV P VC+I++ K +Y +K E RK+ +T I KE+KMR Sbjct: 37 EIADEAGLDLVMFSPEANPPVCRIMNYSKYKYEQEKKQRETRKRAAATRIEVKELKMRYN 96 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRI 116 ID HD V+LKA FL G +VK+ +FRGRE +D+GR++ + ++ + Sbjct: 97 IDSHDYMVRLKAAKKFLDGGDRVKLVCQFRGRENEFRDMGRDMFMKFVDDCNSDEDLCTL 156 Query: 117 DCEPKFEGRQMIMILSS 133 + P EG +M+M+L Sbjct: 157 EGNPSMEGNRMVMVLGP 173 >gi|78211640|ref|YP_380419.1| translation initiation factor IF-3 [Synechococcus sp. CC9605] gi|123756979|sp|Q3ANG8|IF3_SYNSC RecName: Full=Translation initiation factor IF-3 gi|78196099|gb|ABB33864.1| translation initiation factor IF-3 [Synechococcus sp. CC9605] Length = 217 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVARDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|162447701|ref|YP_001620833.1| translation initiation factor IF-3 [Acholeplasma laidlawii PG-8A] gi|161985808|gb|ABX81457.1| translation initiation factor IF-3 [Acholeplasma laidlawii PG-8A] Length = 179 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLD-LVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +++A+E ++D LV + P V K+LD K RY QK E +K Q+ +KE+K+ P Sbjct: 40 LEIARERDIDILVVSPENAKPMVAKLLDYSKHRYDQQKKLKEMKKNQQIVKLKEIKLSPT 99 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 ID HD KL+ F+ G K+K+S++FRGR I H+D+G E ++ E + ++ + Sbjct: 100 IDKHDFDTKLRNAQKFINGGDKLKVSLRFRGRMITHKDIGFEQVNKFVELLQGVV-VESQ 158 Query: 120 PKFEGRQMIMILSS 133 PK EG Q+I I++ Sbjct: 159 PKLEGMQIIAIIAP 172 >gi|319938145|ref|ZP_08012543.1| translation initiation factor IF-3 [Coprobacillus sp. 29_1] gi|319806666|gb|EFW03315.1| translation initiation factor IF-3 [Coprobacillus sp. 29_1] Length = 180 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A ANLDLV + VC+I+D K R+ QK E +K K +KE ++ P I Sbjct: 45 LHTASNANLDLVCVAPKAATPVCRIMDYGKYRFEQQKKQKEMKKNSKVVSLKETQLSPTI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK L G KVK++V+FRGR++ H D+G+++L + + ++ Sbjct: 105 DVHDKNVKLKRTIKMLEAGDKVKVAVRFRGRQLAHIDIGQKILEDFVAECADYCIVEKPA 164 Query: 121 KFEGRQMIMILSSK 134 K EGR +I IL+ K Sbjct: 165 KMEGRTLIAILAPK 178 >gi|323466108|gb|ADX69795.1| translation initiation factor IF-3 [Lactobacillus helveticus H10] Length = 118 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 1/109 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVRKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L++ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLAT 109 >gi|146297791|ref|YP_001192382.1| initiation factor 3 [Flavobacterium johnsoniae UW101] gi|146152209|gb|ABQ03063.1| bacterial translation initiation factor 3 (bIF-3) [Flavobacterium johnsoniae UW101] Length = 129 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 72/126 (57%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VCKI+D +K Y +K + K +KE++ P D HD + K Sbjct: 1 MDLVEISPNAEPPVCKIMDYKKFVYEQKKRDKALKAKSSQVVVKEIRFGPQTDEHDYEFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 K + FL++G K+K V F+GR I+++D G+ LL + E +++ P EG++MI Sbjct: 61 RKNAEKFLKEGAKLKAFVFFKGRSIIYKDQGQILLLRLATDLEEYGKVEAMPVLEGKRMI 120 Query: 129 MILSSK 134 M ++ K Sbjct: 121 MFIAPK 126 >gi|330752454|emb|CBL87404.1| translation initiation factor IF-3 [uncultured Flavobacteria bacterium] Length = 173 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 75/133 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + NLDLVEI P VCK++D +K Y +K + K +KE++ P Sbjct: 38 LAIANDQNLDLVEISPKAVPPVCKVMDYKKFLYEQKKREKALKSKAAKVVVKEIRFGPNT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K + FL +G K+K V F+GR I+ ++ G+ LL + + ++ +++ P Sbjct: 98 DDHDYNFKKKHAEKFLNEGAKLKAFVFFKGRSIIFKEQGQILLLRLAQDLEKLGKVEQMP 157 Query: 121 KFEGRQMIMILSS 133 K EG++MIM ++ Sbjct: 158 KLEGKRMIMFIAP 170 >gi|225619667|ref|YP_002720924.1| translation initiation factor IF-3 [Brachyspira hyodysenteriae WA1] gi|225214486|gb|ACN83220.1| translation initiation factor IF-3 [Brachyspira hyodysenteriae WA1] Length = 194 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 83/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ DLVEI + P VCKI++ K ++ IQK + EA+KKQKS +KE+KMRP I Sbjct: 39 LALAKSEGSDLVEIAPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKSVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLDEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEAATEKPA 158 Query: 121 KFEGRQMIMILS 132 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLN 170 >gi|146318924|ref|YP_001198636.1| translation initiation factor IF-3 [Streptococcus suis 05ZYH33] gi|146321131|ref|YP_001200842.1| translation initiation factor IF-3 [Streptococcus suis 98HAH33] gi|253751998|ref|YP_003025139.1| translation initiation factor IF-3 [Streptococcus suis SC84] gi|253753823|ref|YP_003026964.1| translation initiation factor IF-3 [Streptococcus suis P1/7] gi|253755301|ref|YP_003028441.1| translation initiation factor IF-3 [Streptococcus suis BM407] gi|330832531|ref|YP_004401356.1| translation initiation factor IF-3 [Streptococcus suis ST3] gi|145689730|gb|ABP90236.1| translation initiation factor IF-3 [Streptococcus suis 05ZYH33] gi|145691937|gb|ABP92442.1| translation initiation factor IF-3 [Streptococcus suis 98HAH33] gi|251816287|emb|CAZ51915.1| translation initiation factor IF-3 [Streptococcus suis SC84] gi|251817765|emb|CAZ55517.1| translation initiation factor IF-3 [Streptococcus suis BM407] gi|251820069|emb|CAR46325.1| translation initiation factor IF-3 [Streptococcus suis P1/7] gi|292558580|gb|ADE31581.1| translation initiation factor IF-3 [Streptococcus suis GZ1] gi|319758364|gb|ADV70306.1| translation initiation factor IF-3 [Streptococcus suis JS14] gi|329306754|gb|AEB81170.1| translation initiation factor IF-3 [Streptococcus suis ST3] Length = 168 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 33 IADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 92 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 93 GDFETKLRHARKFLEKGNKVKVSIRFKGRMITHKEVGAKVLAEFAEATQDIAIIEQRAKM 152 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 153 DGRQMFMQLAP 163 >gi|332522796|ref|ZP_08399048.1| translation initiation factor IF-3 [Streptococcus porcinus str. Jelinkova 176] gi|332314060|gb|EGJ27045.1| translation initiation factor IF-3 [Streptococcus porcinus str. Jelinkova 176] Length = 176 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 79/130 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADNANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|229496109|ref|ZP_04389831.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC 35406] gi|229317005|gb|EEN82916.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC 35406] Length = 203 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 73/134 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A A LDLVEI + P VC+++D +K Y +K E + IKE++ P Sbjct: 46 LRIADRAGLDLVEIAAEANPPVCRVIDYQKFIYQKKKKLKEQKSNSVKVVIKEIRFGPQT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK F+ +G KVK V FRGR I+ +D G LL +I+ ++ P Sbjct: 106 DDHDYNFKLKHARSFIGEGSKVKAYVFFRGRSILFKDQGEVLLLRFATDLEDIATVESMP 165 Query: 121 KFEGRQMIMILSSK 134 EG++M M+L+ K Sbjct: 166 SLEGKRMFMMLAPK 179 >gi|313890567|ref|ZP_07824195.1| translation initiation factor IF-3 [Streptococcus pseudoporcinus SPIN 20026] gi|313121084|gb|EFR44195.1| translation initiation factor IF-3 [Streptococcus pseudoporcinus SPIN 20026] Length = 176 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADNANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|82524023|emb|CAI78701.1| translation initiation factor 3 [uncultured Flavobacteriaceae bacterium] Length = 181 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + P VCK++D +K Y +K + K IKE++ P Sbjct: 47 VKIADEQGLDLVEISPNADPPVCKVMDYKKFLYEQKKRDKVIKAKATKVIIKEIRFGPQT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E +++ P Sbjct: 107 DDHDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIIFKEQGQILLLKLAQDLEEYGKVEQMP 166 Query: 121 KFEGRQMIMILSSK 134 + EG++M M L+ K Sbjct: 167 RLEGKRMTMFLAPK 180 >gi|189183872|ref|YP_001937657.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Ikeda] gi|189180643|dbj|BAG40423.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Ikeda] Length = 167 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ A LDLVE S P +CKILD K +Y I+K A +A+KKQ +KE+K+RP I Sbjct: 34 AEMAGLDLVEFSQSDLP-LCKILDYSKYKYEIKKKAQQAKKKQTKVTVKEIKLRPNIADG 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL +K+K+I FL KV ISV F+GREI+H + GR++L NI + +ID PK + Sbjct: 93 DLAIKIKSIKQFLSKNNKVNISVIFKGREIVHAEFGRQILDNIIDVCQVEGKIDSPPKMQ 152 Query: 124 GRQMIMILSSKCV 136 G+ + M +S + Sbjct: 153 GQVITMTMSPNII 165 >gi|222152873|ref|YP_002562050.1| translation initiation factor IF-3 [Streptococcus uberis 0140J] gi|254803496|sp|B9DU40|IF3_STRU0 RecName: Full=Translation initiation factor IF-3 gi|222113686|emb|CAR41622.1| translation initiation factor IF-3 [Streptococcus uberis 0140J] Length = 176 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADAANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|255035015|ref|YP_003085636.1| translation initiation factor IF-3 [Dyadobacter fermentans DSM 18053] gi|254947771|gb|ACT92471.1| translation initiation factor IF-3 [Dyadobacter fermentans DSM 18053] Length = 176 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 74/131 (56%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ LDLVEI + P VCK++D K +Y +K E + K + IKE++ P D Sbjct: 39 MAKAQGLDLVEIAPTAVPPVCKVVDYSKFKYEQKKKQKEIKAKAQKVVIKEIRFGPNTDD 98 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD KLK FL++G KVK V F GR I+ ++ G LL E E +++ EPK Sbjct: 99 HDFDFKLKHATNFLKEGSKVKAYVHFVGRTIVFKERGVNLLKKFSEALSEYGKLEMEPKL 158 Query: 123 EGRQMIMILSS 133 EG++M +IL+ Sbjct: 159 EGKRMTIILAP 169 >gi|187736220|ref|YP_001878332.1| translation initiation factor IF-3 [Akkermansia muciniphila ATCC BAA-835] gi|187426272|gb|ACD05551.1| translation initiation factor IF-3 [Akkermansia muciniphila ATCC BAA-835] Length = 212 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + P VC+++D K +Y Q+ ++ K ++ +KE+K+R Sbjct: 51 LEKAKALGLDLVEVAGNADPPVCRVVDYGKYKY--QQAKLQKNNKSRTVKLKEIKLRIGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK+ + FL G KV+ ++FRGRE HQ+LG ++ + + ++++D P Sbjct: 109 DTNDYNVKMARTESFLDHGHKVRFQLRFRGRENAHQELGYDVFNKVIADMKTMAQVDQAP 168 Query: 121 KFEGRQMIMILS 132 + G M M+LS Sbjct: 169 RLAGNTMHMVLS 180 >gi|160945993|ref|ZP_02093219.1| hypothetical protein FAEPRAM212_03526 [Faecalibacterium prausnitzii M21/2] gi|158443724|gb|EDP20729.1| hypothetical protein FAEPRAM212_03526 [Faecalibacterium prausnitzii M21/2] Length = 192 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA LDLV+I P VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 56 MRAAEEAGLDLVKIAPQAVPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK+S++FRGRE+ H LG ++L E + S D P Sbjct: 116 DTNDFNTKLNQTAKFLAAGHKVKVSIRFRGREMAHSALGADVLKRFAEALPQAS-ADKPP 174 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 175 VLEGRTMSILLIPK 188 >gi|227537392|ref|ZP_03967441.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33300] gi|300772849|ref|ZP_07082718.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33861] gi|227242770|gb|EEI92785.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33300] gi|300759020|gb|EFK55847.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33861] Length = 177 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 72/131 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + P VCKI+D K Y +K E + K T IKE++ P Sbjct: 37 LELADELELDLVEISPNAVPPVCKIIDYSKFIYEQKKKQKEIKANAKQTVIKEIRFGPNT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD KLK FL G KV+ V F+GR I+H+++G LL + + +++ P Sbjct: 97 SEHDFDFKLKHAMRFLESGEKVRAYVHFKGRAIVHKEMGEILLLRFAQALEDYGKVELLP 156 Query: 121 KFEGRQMIMIL 131 K EG++M + + Sbjct: 157 KLEGKRMFLTI 167 >gi|188587762|ref|YP_001921630.1| translation initiation factor IF-3 [Clostridium botulinum E3 str. Alaska E43] gi|251779042|ref|ZP_04821962.1| translation initiation factor IF-3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498043|gb|ACD51179.1| translation initiation factor IF-3 [Clostridium botulinum E3 str. Alaska E43] gi|243083357|gb|EES49247.1| translation initiation factor IF-3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 173 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+E LDLV I + P VCKI+D K Y K EA+KKQK +KEV++ I Sbjct: 38 MRMAEEQELDLVMISPNANPPVCKIMDFGKFIYEQSKKEKEAKKKQKVVSVKEVRVSLTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL DG KVKI+V+FRGRE+ +G +L N ++ ++ +I+ P Sbjct: 98 EEHDISIKAKNARKFLLDGDKVKITVRFRGREMELTHIGARILDNFAKKLEDVCQIEKHP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 158 KKEGRNMTMVLGPK 171 >gi|157364201|ref|YP_001470968.1| translation initiation factor IF-3 [Thermotoga lettingae TMO] gi|157314805|gb|ABV33904.1| translation initiation factor IF-3 [Thermotoga lettingae TMO] Length = 183 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + + P V KI+D K Y I K EARKKQK IK++K R I Sbjct: 49 LEIARRKGLDLVLVSPNGDPPVVKIMDFGKYMYQISKRQKEARKKQKQQEIKQMKFRLKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL +G KVK+++ FRGREI + G+++L I +I+ ++ + Sbjct: 109 DEHDYQTKLKHIRRFLGNGDKVKVTIMFRGREITFTEKGKQILERIANDVSDIAAVETDA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L K Sbjct: 169 KLEGRDMWMQLKPK 182 >gi|124021868|ref|YP_001016175.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9303] gi|166198964|sp|A2C600|IF3_PROM3 RecName: Full=Translation initiation factor IF-3 gi|123962154|gb|ABM76910.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9303] Length = 219 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|119505272|ref|ZP_01627347.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2080] gi|119458963|gb|EAW40063.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2080] Length = 155 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 1/127 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV + S P VCK++D K + +K RKK K +KE+K RP D D QV Sbjct: 27 GMDLVLMAES-DPPVCKVMDYGKHVFEAKKQKAAQRKKTKRIQVKEMKFRPGTDEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K+++++RGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLVRFLENGDKAKVTLRYRGREMAHQEIGMELLKRVEADLSELGNVEQFPKMEGRQL 145 Query: 128 IMILSSK 134 M+++ K Sbjct: 146 TMVIAPK 152 >gi|220931403|ref|YP_002508311.1| initiation factor 3 [Halothermothrix orenii H 168] gi|219992713|gb|ACL69316.1| initiation factor 3 [Halothermothrix orenii H 168] Length = 126 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 77/122 (63%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +E+ P VCKI+D K +Y K A EA+KKQ +KEV+M I+ HD VK K Sbjct: 1 MEVAPQARPPVCKIMDYGKYKYEQAKKAKEAKKKQNVMNVKEVQMGVKIEDHDFNVKAKM 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 FL++ KVK+ ++FRGRE+MH+ LG +L++ + + ++ ++ +PK EGR MIM+L Sbjct: 61 AKRFLKNKHKVKVRIRFRGREVMHKQLGYDLMNRLIDEVKDLGVVESKPKMEGRNMIMVL 120 Query: 132 SS 133 + Sbjct: 121 TP 122 >gi|254432422|ref|ZP_05046125.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001] gi|197626875|gb|EDY39434.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001] Length = 230 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 46 LEVARDRELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + + I P Sbjct: 106 DQHDYDVRIGQASRFLKAGDKVKCTVIFRGREIQHTALAEVLLMRMAKDLEAAAEIQQPP 165 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 166 KREGRNMIMFLSPR 179 >gi|195977985|ref|YP_002123229.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868683|ref|YP_002744631.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus] gi|225870360|ref|YP_002746307.1| translation initiation factor IF-3 [Streptococcus equi subsp. equi 4047] gi|238689812|sp|B4U2J9|IF3_STREM RecName: Full=Translation initiation factor IF-3 gi|254803493|sp|C0M8S9|IF3_STRE4 RecName: Full=Translation initiation factor IF-3 gi|259491514|sp|C0MGM0|IF3_STRS7 RecName: Full=Translation initiation factor IF-3 gi|195974690|gb|ACG62216.1| translation initiation factor InfC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699764|emb|CAW93544.1| translation initiation factor IF-3 [Streptococcus equi subsp. equi 4047] gi|225701959|emb|CAW99501.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus] Length = 176 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADAANVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|33862392|ref|NP_893952.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9313] gi|39931215|sp|Q7TV76|IF3_PROMM RecName: Full=Translation initiation factor IF-3 gi|33640505|emb|CAE20294.1| Translatioin Initiation factor 3 [Prochlorococcus marinus str. MIT 9313] Length = 219 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|239617823|ref|YP_002941145.1| translation initiation factor IF-3 [Kosmotoga olearia TBF 19.5.1] gi|239506654|gb|ACR80141.1| translation initiation factor IF-3 [Kosmotoga olearia TBF 19.5.1] Length = 184 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P V +I+D K +Y +K A EA+KK K +K++K R I Sbjct: 42 LDVAREKGLDLVLVSPNANPPVARIMDYGKYKYEKEKRAKEAKKKAKQVQLKQMKFRLRI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+ I FL G KV++ + FRGRE+ D G++LL + E EI+ ID Sbjct: 102 EDHDFHTKVNRIRQFLSKGNKVRVVIMFRGREMAFTDQGKQLLDRVAEELKEIAEIDKSA 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MIL K Sbjct: 162 KLEGRDMWMILRPKS 176 >gi|221632833|ref|YP_002522055.1| translation initiation factor IF-3 [Thermomicrobium roseum DSM 5159] gi|221156134|gb|ACM05261.1| translation initiation factor IF-3 [Thermomicrobium roseum DSM 5159] Length = 127 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/93 (44%), Positives = 63/93 (67%) Query: 44 KKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 K+QK+ +KE+++RP ID HDL+ K++ I FL DG KVK++V FRGREI++QDLG +L Sbjct: 19 KRQKTIEVKEIRLRPRIDTHDLETKVRQIQQFLTDGAKVKVTVLFRGREIVYQDLGERVL 78 Query: 104 SNIKERFGEISRIDCEPKFEGRQMIMILSSKCV 136 + + G + ++ P EGR ++M L+ V Sbjct: 79 QRVIDLLGPRAVVEQPPHAEGRTLVMFLAPGHV 111 >gi|118444421|ref|YP_877834.1| translation initiation factor IF-3 [Clostridium novyi NT] gi|118134877|gb|ABK61921.1| translation initiation factor IF-3 [Clostridium novyi NT] Length = 134 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 80/132 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV I S+ TP VCKI+D K Y K EA+KKQK IKE+++ P I+ Sbjct: 1 MAEEKELDLVMIASNSTPPVCKIMDYGKYLYEQTKKVKEAKKKQKVINIKEIRLSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD+++K FL+ KVK++V+FRGRE + G+++L ++ I+ K Sbjct: 61 HDIEIKANRTRKFLQAENKVKVTVRFRGREADYSYKGKKILDQFVSEIEDVCVIEKPAKL 120 Query: 123 EGRQMIMILSSK 134 EGR MI+IL+ K Sbjct: 121 EGRNMILILAPK 132 >gi|313887206|ref|ZP_07820902.1| translation initiation factor IF-3 [Porphyromonas asaccharolytica PR426713P-I] gi|332300494|ref|YP_004442415.1| Translation initiation factor IF-3 [Porphyromonas asaccharolytica DSM 20707] gi|312923435|gb|EFR34248.1| translation initiation factor IF-3 [Porphyromonas asaccharolytica PR426713P-I] gi|332177557|gb|AEE13247.1| Translation initiation factor IF-3 [Porphyromonas asaccharolytica DSM 20707] Length = 209 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ LDLVEI + P VC++ + +K Y +K E + KQ +KE++ P D Sbjct: 47 RIAELQGLDLVEISPNAEPPVCRVTNYQKFLYQQKKRQKEQKAKQAKVVVKEIRFGPQTD 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KL+ +GFL+DG KVK V FRGR I+ +D G LL +++R++ P Sbjct: 107 DHDYNFKLRHAEGFLKDGFKVKAYVFFRGRSILFKDQGEILLLRFANDLEDLARVESMPV 166 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 167 LEGKRMTIMLAPKPA 181 >gi|33519812|ref|NP_878644.1| translation initiation factor IF-3 [Candidatus Blochmannia floridanus] gi|39931240|sp|Q7VR70|IF3_BLOFL RecName: Full=Translation initiation factor IF-3 gi|33504157|emb|CAD83419.1| translation initiation factor IF-3 [Candidatus Blochmannia floridanus] Length = 175 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++ LDLVEI + P VCKI++ K Y K+ E +KKQK IKE+K RP Sbjct: 37 IKQAEDLELDLVEISPNSDPPVCKIMNYGKFLYEKNKSTKEQKKKQKIIHIKEIKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ I FL DG K+KI+++FRG E++HQ +G +L I + ++ ++ P Sbjct: 97 DEGDYQVKLRNIIKFLNDGYKIKITLRFRGGELIHQQIGVRVLHRISQDLHDLMTVEIFP 156 Query: 121 -KFEGRQMIMILSSK 134 K EGRQM MIL+ K Sbjct: 157 NKVEGRQMTMILAPK 171 >gi|28896228|ref|NP_802578.1| translation initiation factor IF-3 [Streptococcus pyogenes SSI-1] gi|28811479|dbj|BAC64411.1| putative translation initiation factor 3 (IF3) [Streptococcus pyogenes SSI-1] Length = 142 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 7 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 66 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 67 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 126 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 127 DGRQMFMQLA 136 >gi|300933423|ref|ZP_07148679.1| translation initiation factor IF-3 [Corynebacterium resistens DSM 45100] Length = 126 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 65/118 (55%) Query: 16 SSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGF 75 + P V KI+D K +Y + A EARK Q+ T +KE K RP ID HD + K + F Sbjct: 3 PNAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKNNVVRF 62 Query: 76 LRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 L G KVK+++ FRGRE +LG LL + + E +++ K +GR M M+L Sbjct: 63 LEKGSKVKVTIMFRGREQSRPELGFRLLERLAQDVEEYGQVETRAKQDGRNMTMVLGP 120 >gi|194397268|ref|YP_002037594.1| translation initiation factor IF-3 [Streptococcus pneumoniae G54] gi|238690817|sp|B5E478|IF3_STRP4 RecName: Full=Translation initiation factor IF-3 gi|194356935|gb|ACF55383.1| translation initiation factor IF-3 [Streptococcus pneumoniae G54] Length = 185 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|148284342|ref|YP_001248432.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Boryong] gi|146739781|emb|CAM79648.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Boryong] Length = 180 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ A LDLVE S P +CKILD K +Y I+K A +A+KKQ +KE+K+RP I Sbjct: 47 AEMAGLDLVEFSQSDLP-LCKILDYSKYKYEIKKKAQQAKKKQTKVTVKEIKLRPNIADG 105 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL +K+K+I FL KV ISV F+GREI+H + G+++L NI + +ID PK + Sbjct: 106 DLAIKIKSIKQFLSKNNKVNISVIFKGREIVHAEFGKQILDNIIDVCQVEGKIDSPPKMQ 165 Query: 124 GRQMIMILSSKCV 136 G+ + M +S + Sbjct: 166 GQVITMTMSPNII 178 >gi|239940057|ref|ZP_04691994.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] gi|239986546|ref|ZP_04707210.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 11379] Length = 164 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 65/112 (58%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 +CK++D K +Y A EARK Q T IKE+K+RP ID HD K + FL+ G K Sbjct: 1 MCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDK 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 VKI++ FRGRE +LG LL + ++ I+ PK +GR MIM+L Sbjct: 61 VKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNPKQDGRNMIMVLGP 112 >gi|270292937|ref|ZP_06199148.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Streptococcus sp. M143] gi|270278916|gb|EFA24762.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Streptococcus sp. M143] Length = 181 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 46 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 105 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 106 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 165 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 166 DGRQMFMQLAPAT 178 >gi|111658040|ref|ZP_01408742.1| hypothetical protein SpneT_02000773 [Streptococcus pneumoniae TIGR4] gi|148984701|ref|ZP_01817969.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP3-BS71] gi|148988399|ref|ZP_01819846.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP6-BS73] gi|148992906|ref|ZP_01822525.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP9-BS68] gi|148998606|ref|ZP_01826046.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP11-BS70] gi|149002509|ref|ZP_01827443.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS69] gi|149006365|ref|ZP_01830077.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP18-BS74] gi|149010395|ref|ZP_01831766.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP19-BS75] gi|149019550|ref|ZP_01834869.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP23-BS72] gi|303262285|ref|ZP_07348229.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS292] gi|307067616|ref|YP_003876582.1| hypothetical protein SPAP_0991 [Streptococcus pneumoniae AP200] gi|307704689|ref|ZP_07641588.1| translation initiation factor IF-3 [Streptococcus mitis SK597] gi|307706457|ref|ZP_07643266.1| translation initiation factor IF-3 [Streptococcus mitis SK321] gi|307709140|ref|ZP_07645599.1| translation initiation factor IF-3 [Streptococcus mitis SK564] gi|322376453|ref|ZP_08050946.1| translation initiation factor IF-3 [Streptococcus sp. M334] gi|147755604|gb|EDK62651.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP11-BS70] gi|147759446|gb|EDK66438.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS69] gi|147762142|gb|EDK69104.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP18-BS74] gi|147764876|gb|EDK71805.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP19-BS75] gi|147923092|gb|EDK74207.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP3-BS71] gi|147926080|gb|EDK77154.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP6-BS73] gi|147928358|gb|EDK79374.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP9-BS68] gi|147930925|gb|EDK81905.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP23-BS72] gi|302636608|gb|EFL67099.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS292] gi|306409153|gb|ADM84580.1| hypothetical protein SPAP_0991 [Streptococcus pneumoniae AP200] gi|307618167|gb|EFN97325.1| translation initiation factor IF-3 [Streptococcus mitis SK321] gi|307620086|gb|EFN99203.1| translation initiation factor IF-3 [Streptococcus mitis SK564] gi|307621736|gb|EFO00774.1| translation initiation factor IF-3 [Streptococcus mitis SK597] gi|321282260|gb|EFX59267.1| translation initiation factor IF-3 [Streptococcus sp. M334] gi|327389237|gb|EGE87582.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA04375] gi|332073292|gb|EGI83771.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA17570] gi|332075575|gb|EGI86043.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA17545] gi|332076233|gb|EGI86699.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA41301] gi|332201425|gb|EGJ15495.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA47368] gi|332202814|gb|EGJ16883.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA41317] gi|332204962|gb|EGJ19027.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA47901] Length = 176 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 161 DGRQMFMQLAPAT 173 >gi|15900836|ref|NP_345440.1| translation initiation factor IF-3 [Streptococcus pneumoniae TIGR4] gi|116515644|ref|YP_816329.1| translation initiation factor IF-3 [Streptococcus pneumoniae D39] gi|169832624|ref|YP_001694404.1| translation initiation factor IF-3 [Streptococcus pneumoniae Hungary19A-6] gi|172079515|ref|ZP_02707981.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1873-00] gi|183603128|ref|ZP_02710419.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1087-00] gi|183603354|ref|ZP_02714421.2| translation initiation factor IF-3 [Streptococcus pneumoniae SP195] gi|183603475|ref|ZP_02715191.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC0288-04] gi|183603789|ref|ZP_02721557.2| translation initiation factor IF-3 [Streptococcus pneumoniae MLV-016] gi|221231722|ref|YP_002510874.1| translation initiation factor IF-3 [Streptococcus pneumoniae ATCC 700669] gi|225854463|ref|YP_002735975.1| translation initiation factor IF-3 [Streptococcus pneumoniae JJA] gi|225856617|ref|YP_002738128.1| translation initiation factor IF-3 [Streptococcus pneumoniae P1031] gi|225858752|ref|YP_002740262.1| translation initiation factor IF-3 [Streptococcus pneumoniae 70585] gi|225861154|ref|YP_002742663.1| translation initiation factor IF-3 [Streptococcus pneumoniae Taiwan19F-14] gi|237650891|ref|ZP_04525143.1| translation initiation factor IF-3 [Streptococcus pneumoniae CCRI 1974] gi|289167802|ref|YP_003446071.1| translation initiation factor IF-3 [Streptococcus mitis B6] gi|298229847|ref|ZP_06963528.1| translation initiation factor IF-3 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254546|ref|ZP_06978132.1| translation initiation factor IF-3 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503031|ref|YP_003724971.1| translation initiation factor IF-3 [Streptococcus pneumoniae TCH8431/19A] gi|303254427|ref|ZP_07340533.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS455] gi|303259871|ref|ZP_07345846.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP-BS293] gi|303264707|ref|ZP_07350625.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS397] gi|303267236|ref|ZP_07353101.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS457] gi|303269522|ref|ZP_07355287.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS458] gi|307127490|ref|YP_003879521.1| translation initiation factor IF-3 [Streptococcus pneumoniae 670-6B] gi|307708591|ref|ZP_07645055.1| translation initiation factor IF-3 [Streptococcus mitis NCTC 12261] gi|54037393|sp|P65145|IF3_STRR6 RecName: Full=Translation initiation factor IF-3 gi|54041114|sp|P65144|IF3_STRPN RecName: Full=Translation initiation factor IF-3 gi|122278785|sp|Q04KW9|IF3_STRP2 RecName: Full=Translation initiation factor IF-3 gi|238688289|sp|B1IBB9|IF3_STRPI RecName: Full=Translation initiation factor IF-3 gi|254803494|sp|C1C6T6|IF3_STRP7 RecName: Full=Translation initiation factor IF-3 gi|254803495|sp|B8ZP56|IF3_STRPJ RecName: Full=Translation initiation factor IF-3 gi|254803497|sp|C1CDV4|IF3_STRZJ RecName: Full=Translation initiation factor IF-3 gi|254803498|sp|C1CK40|IF3_STRZP RecName: Full=Translation initiation factor IF-3 gi|254803499|sp|C1CRU1|IF3_STRZT RecName: Full=Translation initiation factor IF-3 gi|14972433|gb|AAK75080.1| translation initiation factor IF-3 [Streptococcus pneumoniae TIGR4] gi|116076220|gb|ABJ53940.1| translation initiation factor IF-3 [Streptococcus pneumoniae D39] gi|168995126|gb|ACA35738.1| translation initiation factor IF-3 [Streptococcus pneumoniae Hungary19A-6] gi|172043479|gb|EDT51525.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1873-00] gi|183570945|gb|EDT91473.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1087-00] gi|183571413|gb|EDT91941.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP195] gi|183574728|gb|EDT95256.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC0288-04] gi|183578415|gb|EDT98943.1| translation initiation factor IF-3 [Streptococcus pneumoniae MLV-016] gi|220674182|emb|CAR68710.1| translation initiation factor IF-3 [Streptococcus pneumoniae ATCC 700669] gi|225720905|gb|ACO16759.1| translation initiation factor IF-3 [Streptococcus pneumoniae 70585] gi|225722553|gb|ACO18406.1| translation initiation factor IF-3 [Streptococcus pneumoniae JJA] gi|225724878|gb|ACO20730.1| translation initiation factor IF-3 [Streptococcus pneumoniae P1031] gi|225727713|gb|ACO23564.1| translation initiation factor IF-3 [Streptococcus pneumoniae Taiwan19F-14] gi|288907369|emb|CBJ22206.1| translation initiation factor IF-3 [Streptococcus mitis B6] gi|298238626|gb|ADI69757.1| translation initiation factor IF-3 [Streptococcus pneumoniae TCH8431/19A] gi|301794097|emb|CBW36503.1| translation initiation factor IF-3 [Streptococcus pneumoniae INV104] gi|301799935|emb|CBW32518.1| translation initiation factor IF-3 [Streptococcus pneumoniae OXC141] gi|301801802|emb|CBW34513.1| translation initiation factor IF-3 [Streptococcus pneumoniae INV200] gi|302598594|gb|EFL65634.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS455] gi|302639076|gb|EFL69536.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP-BS293] gi|302640958|gb|EFL71340.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS458] gi|302643245|gb|EFL73527.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS457] gi|302645794|gb|EFL76023.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS397] gi|306484552|gb|ADM91421.1| translation initiation factor IF-3 [Streptococcus pneumoniae 670-6B] gi|307615340|gb|EFN94549.1| translation initiation factor IF-3 [Streptococcus mitis NCTC 12261] Length = 185 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|293365204|ref|ZP_06611921.1| translation initiation factor IF3 [Streptococcus oralis ATCC 35037] gi|306825434|ref|ZP_07458774.1| translation initiation factor IF3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306829311|ref|ZP_07462501.1| translation initiation factor IF3 [Streptococcus mitis ATCC 6249] gi|315612967|ref|ZP_07887878.1| translation initiation factor IF3 [Streptococcus sanguinis ATCC 49296] gi|331266580|ref|YP_004326210.1| translation initiation factor IF-3 [Streptococcus oralis Uo5] gi|291316654|gb|EFE57090.1| translation initiation factor IF3 [Streptococcus oralis ATCC 35037] gi|304428397|gb|EFM31487.1| translation initiation factor IF3 [Streptococcus mitis ATCC 6249] gi|304432372|gb|EFM35348.1| translation initiation factor IF3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315315077|gb|EFU63118.1| translation initiation factor IF3 [Streptococcus sanguinis ATCC 49296] gi|326683252|emb|CBZ00870.1| translation initiation factor IF-3 [Streptococcus oralis Uo5] Length = 185 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|329117528|ref|ZP_08246245.1| translation initiation factor IF-3 [Streptococcus parauberis NCFD 2020] gi|326907933|gb|EGE54847.1| translation initiation factor IF-3 [Streptococcus parauberis NCFD 2020] Length = 176 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 78/130 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A N+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADSLNVDLVLIQPQAVPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +IS I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDISIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|188996618|ref|YP_001930869.1| translation initiation factor IF-3 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931685|gb|ACD66315.1| translation initiation factor IF-3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 168 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLVE+ + P VCKI+D K ++ +K EA+KKQ +KE+K + I Sbjct: 34 LRLAREKNLDLVEVSPNANPPVCKIMDYGKYKFEQKKKEKEAKKKQHVQDVKEMKFKLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K+K I F++DG KV++ + FRGRE +H +LG +L I E +I+ ++ P Sbjct: 94 EKHDYETKIKHIRDFIQDGDKVRVWIWFRGRENVHPELGDKLAQRIIEDVSDIAVVEKPP 153 Query: 121 KFEGRQMIMILSSK 134 EG+ M+ L K Sbjct: 154 VKEGKNMMFTLIPK 167 >gi|145344485|ref|XP_001416762.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576988|gb|ABO95055.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 177 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +++A E LDLV + P + +I++ K +Y +K EARKK + IKE+KMR Sbjct: 35 LELAAEKELDLVVMSPDAEPPLARIMNYSKYKYEKEKKDREARKKAAAVRVDIKELKMRY 94 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL G KVK+ +FRGRE +++GRE+ + E GE+ ++ Sbjct: 95 NIDTHDYGVRLRAAQKFLEGGDKVKVICQFRGRENDFREIGREMFARFVEDVGEVGSLES 154 Query: 119 EPKFEGRQMIMILS 132 +P EG M M+L+ Sbjct: 155 KPSMEGNSMTMLLA 168 >gi|307703742|ref|ZP_07640683.1| translation initiation factor IF-3 [Streptococcus oralis ATCC 35037] gi|322374507|ref|ZP_08049021.1| translation initiation factor IF-3 [Streptococcus sp. C300] gi|307622577|gb|EFO01573.1| translation initiation factor IF-3 [Streptococcus oralis ATCC 35037] gi|321280007|gb|EFX57046.1| translation initiation factor IF-3 [Streptococcus sp. C300] Length = 176 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 161 DGRQMFMQLAPAT 173 >gi|119476521|ref|ZP_01616872.1| Translation initiation factor 3 (IF-3) [marine gamma proteobacterium HTCC2143] gi|119450385|gb|EAW31620.1| Translation initiation factor 3 (IF-3) [marine gamma proteobacterium HTCC2143] Length = 143 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 81/128 (63%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLV+I S P VCKI+D K + +K +KKQ T +KE+K RP + D QV Sbjct: 14 TLDLVQIADS-DPIVCKIMDYGKHVFEAKKQQAAQKKKQVRTQVKEMKFRPGTEDGDYQV 72 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K+++++RGRE+ HQ+LG +LL +++ E+ ++ PK EGRQ+ Sbjct: 73 KLRNLVRFLENGDKAKVTLRYRGREMAHQELGIDLLKRVEKDLEELGSVEQFPKMEGRQL 132 Query: 128 IMILSSKC 135 M+++ K Sbjct: 133 TMVIAPKS 140 >gi|157150634|ref|YP_001450321.1| translation initiation factor IF-3 [Streptococcus gordonii str. Challis substr. CH1] gi|262282400|ref|ZP_06060168.1| translation initiation factor IF-3 [Streptococcus sp. 2_1_36FAA] gi|157075428|gb|ABV10111.1| translation initiation factor IF-3 [Streptococcus gordonii str. Challis substr. CH1] gi|262261691|gb|EEY80389.1| translation initiation factor IF-3 [Streptococcus sp. 2_1_36FAA] Length = 176 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 78/131 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +++ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDVAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|15902905|ref|NP_358455.1| translation initiation factor IF-3 [Streptococcus pneumoniae R6] gi|182683905|ref|YP_001835652.1| translation initiation factor IF-3 [Streptococcus pneumoniae CGSP14] gi|15458465|gb|AAK99665.1| Translation initiation factor IF-3 [Streptococcus pneumoniae R6] gi|182629239|gb|ACB90187.1| translation initiation factor IF-3 [Streptococcus pneumoniae CGSP14] Length = 195 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 77/130 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 60 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 119 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 120 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 179 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 180 DGRQMFMQLA 189 >gi|313115006|ref|ZP_07800499.1| translation initiation factor IF-3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622697|gb|EFQ06159.1| translation initiation factor IF-3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 192 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLV+I P VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 56 MRAAEDAGLDLVKIAPQAVPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK+S++FRGRE+ H LG ++L E + S D P Sbjct: 116 DTNDFNTKLNQTAKFLAAGHKVKVSIRFRGREMAHSALGADVLKRFAEALPQAS-TDKPP 174 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 175 VLEGRTMSILLIPK 188 >gi|125624804|ref|YP_001033287.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris MG1363] gi|124493612|emb|CAL98599.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris MG1363] gi|300071603|gb|ADJ61003.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris NZ9000] Length = 216 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ N+DLV I S+ P V KI+D K + +K EA+KKQ +KEV++ PVID + Sbjct: 85 AENLNMDLVLI-SNQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVIDQN 143 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL+ FL G KVK+S++F+GR I HQD+GR+++ E E++ ++ K + Sbjct: 144 DFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAEATKEVAVVEQRAKMD 203 Query: 124 GRQMIMILS 132 GRQM + L+ Sbjct: 204 GRQMFLQLA 212 >gi|187932865|ref|YP_001886668.1| translation initiation factor IF-3 [Clostridium botulinum B str. Eklund 17B] gi|187721018|gb|ACD22239.1| translation initiation factor IF-3 [Clostridium botulinum B str. Eklund 17B] Length = 173 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+E LDLV I + P VCKI+D K Y K EA+KKQK +KEV++ I Sbjct: 38 MRMAEEQELDLVMISPNANPPVCKIMDFGKFIYEQSKKEKEAKKKQKVVSVKEVRVSLTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL DG KVKI+V+FRGRE+ +G +L N ++ ++ +I+ P Sbjct: 98 EEHDIFIKAKNARKFLLDGDKVKITVRFRGREMELTHIGARILDNFAKKLEDVCQIEKHP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 158 KKEGRNMTMVLGPK 171 >gi|116512720|ref|YP_811627.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris SK11] gi|116108374|gb|ABJ73514.1| bacterial translation initiation factor 3 (bIF-3) [Lactococcus lactis subsp. cremoris SK11] Length = 216 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ N+DLV I S+ P V KI+D K + +K EA+KKQ +KEV++ PVID + Sbjct: 85 AENLNMDLVLI-SNQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVIDQN 143 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL+ FL G KVK+S++F+GR I HQD+GR+++ E E++ ++ K + Sbjct: 144 DFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAEATKEVAVVEQRAKMD 203 Query: 124 GRQMIMILS 132 GRQM + L+ Sbjct: 204 GRQMFLQLA 212 >gi|328464799|gb|EGF36114.1| translational initiation factor IL3 [Lactobacillus helveticus MTCC 5463] Length = 119 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 72/108 (66%), Gaps = 1/108 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVCKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLA 108 >gi|260103150|ref|ZP_05753387.1| initiation factor IF3 [Lactobacillus helveticus DSM 20075] gi|260083060|gb|EEW67180.1| initiation factor IF3 [Lactobacillus helveticus DSM 20075] Length = 118 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 72/108 (66%), Gaps = 1/108 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVCKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLA 108 >gi|161507857|ref|YP_001577821.1| translational initiation factor IL3 [Lactobacillus helveticus DPC 4571] gi|160348846|gb|ABX27520.1| translational initiation factor IL3 [Lactobacillus helveticus DPC 4571] Length = 118 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 71/108 (65%), Gaps = 1/108 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + K K + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKFKHVRKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLA 108 >gi|167957095|ref|ZP_02544169.1| translation initiation factor IF-3 [candidate division TM7 single-cell isolate TM7c] Length = 140 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 81/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ +LDLVEI P V KI+D K +Y K+ + R++ KS +K+++ I Sbjct: 10 AEGMDLDLVEISPGAKPPVAKIIDWGKYQYQKMKDQQKNRRQAKSGDLKQMRFGLKIGAG 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+VKLK I FL +G KV+I V ++GRE+ H+++G EL+ + ++ + + ++ +P+ Sbjct: 70 DLKVKLKKIRKFLENGHKVRIQVVYKGREMAHKEIGYELIDKVMDQLSDDAILEQKPQMA 129 Query: 124 GRQMIMILSSK 134 GR + +++ SK Sbjct: 130 GRNLSVVIRSK 140 >gi|168188009|ref|ZP_02622644.1| translation initiation factor IF-3 [Clostridium botulinum C str. Eklund] gi|169294161|gb|EDS76294.1| translation initiation factor IF-3 [Clostridium botulinum C str. Eklund] Length = 134 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 79/132 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV I S+ TP VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 1 MAEEKELDLVMIASNSTPPVCKIMDYGKYLYEQTKKVKEAKKKQKVINVKEIRLSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD+++K FL KVK++V+FRGRE + G+++L ++ I+ K Sbjct: 61 HDVEIKANRTRKFLEAENKVKVTVRFRGREADYSYKGKKILDQFVSEIEDVCVIEKPAKL 120 Query: 123 EGRQMIMILSSK 134 EGR MI+IL+ K Sbjct: 121 EGRNMILILAPK 132 >gi|94994102|ref|YP_602200.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10750] gi|123382192|sp|Q1J7B8|IF3_STRPF RecName: Full=Translation initiation factor IF-3 gi|94547610|gb|ABF37656.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS10750] Length = 176 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|323127037|gb|ADX24334.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 176 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADTSNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|251782183|ref|YP_002996485.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390812|dbj|BAH81271.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322411519|gb|EFY02427.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 176 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|15674846|ref|NP_269020.1| translation initiation factor IF-3 [Streptococcus pyogenes M1 GAS] gi|19745885|ref|NP_607021.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS8232] gi|21910074|ref|NP_664342.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS315] gi|50913982|ref|YP_059954.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10394] gi|56808731|ref|ZP_00366450.1| COG0290: Translation initiation factor 3 (IF-3) [Streptococcus pyogenes M49 591] gi|71903264|ref|YP_280067.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS6180] gi|71910432|ref|YP_281982.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS5005] gi|94988305|ref|YP_596406.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS9429] gi|94990183|ref|YP_598283.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10270] gi|94992181|ref|YP_600280.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS2096] gi|139474014|ref|YP_001128730.1| translation initiation factor IF-3 [Streptococcus pyogenes str. Manfredo] gi|209559173|ref|YP_002285645.1| translation initiation factor IF-3 [Streptococcus pyogenes NZ131] gi|306827594|ref|ZP_07460874.1| translation initiation factor IF3 [Streptococcus pyogenes ATCC 10782] gi|54037394|sp|P65147|IF3_STRP3 RecName: Full=Translation initiation factor IF-3 gi|54037395|sp|P65148|IF3_STRP8 RecName: Full=Translation initiation factor IF-3 gi|54041116|sp|P65146|IF3_STRP1 RecName: Full=Translation initiation factor IF-3 gi|61213081|sp|Q5XCU2|IF3_STRP6 RecName: Full=Translation initiation factor IF-3 gi|122986937|sp|Q1JCH2|IF3_STRPB RecName: Full=Translation initiation factor IF-3 gi|122987125|sp|Q1JMF0|IF3_STRPC RecName: Full=Translation initiation factor IF-3 gi|123258030|sp|Q1JHJ7|IF3_STRPD RecName: Full=Translation initiation factor IF-3 gi|123775251|sp|Q48U94|IF3_STRPM RecName: Full=Translation initiation factor IF-3 gi|166233784|sp|A2RF84|IF3_STRPG RecName: Full=Translation initiation factor IF-3 gi|238054434|sp|B5XKT8|IF3_STRPZ RecName: Full=Translation initiation factor IF-3 gi|13621980|gb|AAK33741.1| putative translation initiation factor 3 (IF3) [Streptococcus pyogenes M1 GAS] gi|19748037|gb|AAL97520.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS8232] gi|21904265|gb|AAM79145.1| putative translation initiation factor 3 [Streptococcus pyogenes MGAS315] gi|50903056|gb|AAT86771.1| Translation Initiation Factor 3 [Streptococcus pyogenes MGAS10394] gi|71802359|gb|AAX71712.1| bacterial protein translation initiation factor 3 (IF-3) [Streptococcus pyogenes MGAS6180] gi|71853214|gb|AAZ51237.1| bacterial protein translation initiation factor 3 [Streptococcus pyogenes MGAS5005] gi|94541813|gb|ABF31862.1| bacterial protein translation initiation factor 3 (IF-3) [Streptococcus pyogenes MGAS9429] gi|94543691|gb|ABF33739.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS10270] gi|94545689|gb|ABF35736.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS2096] gi|134272261|emb|CAM30513.1| translation initiation factor IF-3 [Streptococcus pyogenes str. Manfredo] gi|209540374|gb|ACI60950.1| Translation initiation factor 3 [Streptococcus pyogenes NZ131] gi|304430157|gb|EFM33186.1| translation initiation factor IF3 [Streptococcus pyogenes ATCC 10782] Length = 176 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 80/130 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILS 132 +GRQM M L+ Sbjct: 161 DGRQMFMQLA 170 >gi|290580828|ref|YP_003485220.1| putative translation initiation factor IF3 [Streptococcus mutans NN2025] gi|254997727|dbj|BAH88328.1| putative translation initiation factor IF3 [Streptococcus mutans NN2025] Length = 200 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 N+DLV I TP V +I+D K ++ QK E RKKQ IKEV++ PVID D + Sbjct: 70 NVDLVLIQPQATPPVARIMDYGKFKFEYQKKQKEQRKKQSVVTIKEVRLSPVIDKGDFET 129 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K +GRQM Sbjct: 130 KLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQM 189 Query: 128 IMILSS 133 M L+ Sbjct: 190 FMQLAP 195 >gi|24379168|ref|NP_721123.1| translation initiation factor IF-3 [Streptococcus mutans UA159] gi|29427453|sp|Q8DV22|IF3_STRMU RecName: Full=Translation initiation factor IF-3 gi|24377076|gb|AAN58429.1|AE014913_6 putative translation initiation factor IF3 [Streptococcus mutans UA159] Length = 176 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 N+DLV I TP V +I+D K ++ QK E RKKQ IKEV++ PVID D + Sbjct: 46 NVDLVLIQPQATPPVARIMDYGKFKFEYQKKQKEQRKKQSVVTIKEVRLSPVIDKGDFET 105 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K +GRQM Sbjct: 106 KLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQM 165 Query: 128 IMILSS 133 M L+ Sbjct: 166 FMQLAP 171 >gi|15673826|ref|NP_268001.1| translation initiation factor IF-3 [Lactococcus lactis subsp. lactis Il1403] gi|281492456|ref|YP_003354436.1| translation Initiation Factor 3 [Lactococcus lactis subsp. lactis KF147] gi|12724874|gb|AAK05942.1|AE006414_8 translation initiation factor IF-3 [Lactococcus lactis subsp. lactis Il1403] gi|281376120|gb|ADA65611.1| Translation Initiation Factor 3 (IF-3) [Lactococcus lactis subsp. lactis KF147] gi|326407335|gb|ADZ64406.1| translation initiation factor IF-3 [Lactococcus lactis subsp. lactis CV56] Length = 164 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ N+DLV I S+ P V KI+D K + +K EA+KKQ +KEV++ PVID + Sbjct: 33 AENLNMDLVLI-SNQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVIDQN 91 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL+ FL G KVK+S++F+GR I HQD+GR+++ + E++ ++ K + Sbjct: 92 DFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAQATKEVAVVEQRAKMD 151 Query: 124 GRQMIMILS 132 GRQM + L+ Sbjct: 152 GRQMFLQLA 160 >gi|50365004|ref|YP_053429.1| translation initiation factor IF-3 [Mesoplasma florum L1] gi|81695690|sp|Q6F1S8|IF3_MESFL RecName: Full=Translation initiation factor IF-3 gi|50363560|gb|AAT75545.1| translation initiation factor IF-3 [Mesoplasma florum L1] Length = 180 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +Q+A+E LDL+++ ++CKILD K RY QK EA+K Q KE+++ Sbjct: 45 IQLAEEKGLDLMQVGQQPDGLAICKILDYGKFRYQQQKKNKEAKKNQVKVENKEIRLTVN 104 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I HDL K K FL G +VKIS+KF+GREI + DLG+E L + +I++I+ E Sbjct: 105 IGQHDLVTKAKKAREFLEAGDRVKISLKFKGREIAYMDLGKETLDRFYKEIEDIAKIEKE 164 Query: 120 PKFEGRQMIMILSSK 134 K R + M + K Sbjct: 165 AKLTSRFLDMYVVPK 179 >gi|298206754|ref|YP_003714933.1| translation initiation factor IF-3 [Croceibacter atlanticus HTCC2559] gi|83849385|gb|EAP87253.1| translation initiation factor IF-3 [Croceibacter atlanticus HTCC2559] Length = 155 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P V K++D +K Y +K + K +KE++ P Sbjct: 19 IKIAEEQGLDLVEISPNAEPPVAKVMDYKKFLYEQKKREKAIKAKASKVVVKEIRFGPNT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL++G K+K V F+GR I+ +D G LL + + ++ +++ P Sbjct: 79 DDHDYEFKKNHGEKFLKEGAKLKAYVFFKGRSIVFKDQGEILLLRLAQDLEDVGKVEQMP 138 Query: 121 KFEGRQMIMILSSK 134 K EG++M M ++ K Sbjct: 139 KLEGKRMTMFIAPK 152 >gi|315221378|ref|ZP_07863299.1| translation initiation factor IF-3 [Streptococcus anginosus F0211] gi|315189497|gb|EFU23191.1| translation initiation factor IF-3 [Streptococcus anginosus F0211] Length = 185 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 IADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ + +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAQATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|319939329|ref|ZP_08013689.1| translation initiation factor IF-3 [Streptococcus anginosus 1_2_62CV] gi|319811315|gb|EFW07610.1| translation initiation factor IF-3 [Streptococcus anginosus 1_2_62CV] Length = 176 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 IADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ + +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAQATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|330719255|ref|ZP_08313855.1| translation initiation factor 3 [Leuconostoc fallax KCTC 3537] Length = 143 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A++ DLV + ++ P V KI+D K+++ QK E RK QK KEV+M PVID Sbjct: 8 KIAEDMEQDLVLVQANAVPPVAKIMDWGKVKFQQQKKQKEQRKNQKIVQTKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + KA FL G KVK++++FRGR + HQD+GRE+L + +I++++ K Sbjct: 68 SGDFDTRKKAAIKFLEKGNKVKLNLRFRGRMMTHQDIGREVLERMANELTDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|170781627|ref|YP_001709959.1| putative translation initiation factor IF-3 [Clavibacter michiganensis subsp. sepedonicus] gi|169156195|emb|CAQ01337.1| putative translation initiation factor IF-3 [Clavibacter michiganensis subsp. sepedonicus] Length = 143 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 63/111 (56%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 + KI+D K +Y + A EAR+ Q +T +KEV+ R ID HD + K K +GFL+DG K Sbjct: 1 MAKIMDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKIDKHDYETKRKRAEGFLQDGDK 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 VK + FRGRE D G LL E E ++ P +GR M+M++ Sbjct: 61 VKAMILFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIG 111 >gi|320528351|ref|ZP_08029513.1| translation initiation factor IF-3 [Solobacterium moorei F0204] gi|320131265|gb|EFW23833.1| translation initiation factor IF-3 [Solobacterium moorei F0204] Length = 182 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDL+ + + VCKILD + + QK EA+K Q T +K +++ PVI Sbjct: 46 LEKAYSMELDLMCVAPNAPVPVCKILDYGRYHFEDQKKQREAKKNQHVTEVKALRLSPVI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK ++ G KV+I ++FRGR I Q++GR++L+ E+ +I+ + Sbjct: 106 DQHDFETKLKRSREWIEAGQKVRIDMRFRGRMITRQEVGRDVLNKFTEQISDIADVSKSA 165 Query: 121 KFEGRQMIMILSSK 134 EG + ++ S K Sbjct: 166 AMEGNTLSVVYSPK 179 >gi|14194829|sp|Q9CEJ7|IF3_LACLA RecName: Full=Translation initiation factor IF-3 Length = 179 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ N+DLV I S+ P V KI+D K + +K EA+KKQ +KEV++ PVID + Sbjct: 48 AENLNMDLVLI-SNQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVIDQN 106 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D KL+ FL G KVK+S++F+GR I HQD+GR+++ + E++ ++ K + Sbjct: 107 DFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAQATKEVAVVEQRAKMD 166 Query: 124 GRQMIMILS 132 GRQM + L+ Sbjct: 167 GRQMFLQLA 175 >gi|28493131|ref|NP_787292.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist] gi|28572755|ref|NP_789535.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27] gi|39931266|sp|Q83GT2|IF3_TROWT RecName: Full=Translation initiation factor IF-3 gi|39931269|sp|Q83HH0|IF3_TROW8 RecName: Full=Translation initiation factor IF-3 gi|28410888|emb|CAD67273.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27] gi|28476171|gb|AAO44261.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist] Length = 182 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 73/132 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVE+ P V KI+D K RY + A EAR++Q +KEV+ R I Sbjct: 29 LRLAGEVGLDLVEVSPFSKPPVVKIMDYGKFRYEASQKAKEARRRQSGVSVKEVRFRLKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D VKL+ FL+ G KVK+ + FRGRE +LG +LL + E D Sbjct: 89 CDNDYDVKLRKAISFLQAGDKVKVMILFRGREQSRPELGVKLLKKFADDISEFGSADSLS 148 Query: 121 KFEGRQMIMILS 132 + +GR M +++S Sbjct: 149 RTDGRGMAIMVS 160 >gi|183221770|ref|YP_001839766.1| translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911844|ref|YP_001963399.1| translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687806|sp|B0SKZ7|IF3_LEPBP RecName: Full=Translation initiation factor IF-3 gi|238687834|sp|B0SCH4|IF3_LEPBA RecName: Full=Translation initiation factor IF-3 gi|167776520|gb|ABZ94821.1| Translation initiation factor 3 (IF-3) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780192|gb|ABZ98490.1| Translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 187 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EANLDLVE+ VCK++D K ++ + K EA+KKQ +KE+K+RP I Sbjct: 48 LRRAKEANLDLVEVSGDQDVHVCKLIDFGKYKFELLKKTKEAKKKQHVVTVKEIKIRPRI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD ++K + FL+ G KVK++++FRGRE++H ++G +++ E E + + P Sbjct: 108 DNHDFEIKKRHALEFLQKGDKVKVTLRFRGREMVHSEIGMNIVNRFVEDLKEHASPEKMP 167 Query: 121 KFEGRQMIMILSS 133 +G+ ++++++ Sbjct: 168 VHDGKTIVVVMNP 180 >gi|51245279|ref|YP_065163.1| translation initiation factor IF-3 [Desulfotalea psychrophila LSv54] gi|50876316|emb|CAG36156.1| probable translation initiation factor IF-3 [Desulfotalea psychrophila LSv54] Length = 142 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLV + + P VC++++ K RY +K EA+KKQ + KE+K RP D Sbjct: 8 EIAYGEGLDLVVVSDNAEPPVCRVMNYDKFRYEQKKKQQEAKKKQTTVETKEIKFRPKTD 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMH-QDLGRELLSNIKERFGEISRIDCEP 120 HDL K+K + FL KVK++++FRGREI++ Q +G E ++ + E + I P Sbjct: 68 EHDLNFKIKNVKKFLAQKNKVKLTMRFRGREIVYSQTIGLEAMNKVVEALEGEAVILQRP 127 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M + K Sbjct: 128 KMEGRQLVMFVGPKA 142 >gi|323143350|ref|ZP_08078038.1| translation initiation factor IF-3 [Succinatimonas hippei YIT 12066] gi|322416868|gb|EFY07514.1| translation initiation factor IF-3 [Succinatimonas hippei YIT 12066] Length = 156 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A +DLVEI + P VC++++ K Y +K+ + +KKQK +KE+K RP Sbjct: 20 LRMAEDAGVDLVEISPNADPPVCRLIEYGK--YLYEKSKDQKKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE---ISRID 117 D D QVKL+ + FL DG K K++++FRGRE+ HQ LG ++L ++ ++ ++ Sbjct: 78 DEGDYQVKLRNLIRFLEDGNKAKVTLRFRGRELAHQHLGLDVLKRVENDLCTERGLATVE 137 Query: 118 CEPKFEGRQMIMILSSK 134 + EGRQ M+L+ K Sbjct: 138 SASRVEGRQATMVLAPK 154 >gi|326795751|ref|YP_004313571.1| translation initiation factor IF-3 [Marinomonas mediterranea MMB-1] gi|326546515|gb|ADZ91735.1| Translation initiation factor IF-3 [Marinomonas mediterranea MMB-1] Length = 177 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 7 ANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 A LDLV+I S P VCKI+D K + +K +K K +KE+K RP + D Q Sbjct: 48 AALDLVQIADS-DPIVCKIMDYGKHVFEQKKAKAAQKKNAKQIQVKEMKFRPGTEEGDYQ 106 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 VKL+ + FL G K K+S+++RGRE+ HQ+LG +L++ + + E ++ K EGRQ Sbjct: 107 VKLRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMNRVAQDLEEYGVVEQAAKMEGRQ 166 Query: 127 MIMILSSK 134 + M+L+ K Sbjct: 167 LTMVLAPK 174 >gi|210615124|ref|ZP_03290455.1| hypothetical protein CLONEX_02671 [Clostridium nexile DSM 1787] gi|210150432|gb|EEA81441.1| hypothetical protein CLONEX_02671 [Clostridium nexile DSM 1787] Length = 164 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 76/123 (61%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P ID +DL K+ Sbjct: 41 VKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNIDTNDLNTKVNN 100 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F++ G KVK++++FRGRE+ H + +L + E +++ I+ K EGR + M+L Sbjct: 101 AKKFIQKGNKVKVTLRFRGREMAHMQTSKHILDDFAEMLKDVAAIEKPAKLEGRSISMVL 160 Query: 132 SSK 134 + K Sbjct: 161 TEK 163 >gi|218960856|ref|YP_001740631.1| protein chain initiation factor IF-3 [Candidatus Cloacamonas acidaminovorans] gi|167729513|emb|CAO80424.1| protein chain initiation factor IF-3 [Candidatus Cloacamonas acidaminovorans] Length = 195 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ +LDLVEI + P VC+ILD K + +K A EARK+Q +KE+K P Sbjct: 34 LRKAENMDLDLVEISPNAVPPVCRILDFSKYYFEKEKKAKEARKRQHEVEVKEIKFGPNT 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K FL+ KVK +V+FRGR++ H++LG ++L +KE + ID EP Sbjct: 94 EEHDYNFKKNNAIKFLKQHNKVKFTVRFRGRQMAHKELGYKVLDKLKEDLAHLVDIDGEP 153 Query: 121 KFEGRQMIMILSSK 134 + + M++S K Sbjct: 154 VADRNMISMVVSPK 167 >gi|15644338|ref|NP_229390.1| translation initiation factor IF-3 [Thermotoga maritima MSB8] gi|170289042|ref|YP_001739280.1| initiation factor 3 [Thermotoga sp. RQ2] gi|4982161|gb|AAD36657.1|AE001804_1 translation initiation factor IF-3 [Thermotoga maritima MSB8] gi|170176545|gb|ACB09597.1| initiation factor 3 [Thermotoga sp. RQ2] Length = 144 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y Q + K+K +K++K R I Sbjct: 11 LELAREKGLDLVLVAPNENPPVARIMDYGKYKY--QLTKKQKENKKKPVQMKQMKFRLKI 68 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 69 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 128 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 129 KMEGRDMWMVLKPK 142 >gi|281412638|ref|YP_003346717.1| translation initiation factor IF-3 [Thermotoga naphthophila RKU-10] gi|281373741|gb|ADA67303.1| translation initiation factor IF-3 [Thermotoga naphthophila RKU-10] Length = 170 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y Q + K+K +K++K R I Sbjct: 37 LELAREKGLDLVLVAPNENPPVARIMDYGKYKY--QLTKKQKENKKKPVQMKQMKFRLKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 95 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 154 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 155 KMEGRDMWMVLKPK 168 >gi|183603637|ref|ZP_02718531.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC3059-06] gi|183575708|gb|EDT96236.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC3059-06] Length = 185 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQ+ M L+ Sbjct: 170 DGRQIFMQLAPAT 182 >gi|126640662|ref|YP_001083646.1| protein chain initiation factor IF-3 [Acinetobacter baumannii ATCC 17978] Length = 89 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 57/84 (67%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 3 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 62 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E+ ++ PK EGRQM M+L K Sbjct: 63 AELGVVEQAPKMEGRQMGMLLGPK 86 >gi|7387793|sp|Q9X1S6|IF3_THEMA RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y Q + K+K +K++K R I Sbjct: 39 LELAREKGLDLVLVAPNENPPVARIMDYGKYKY--QLTKKQKENKKKPVQMKQMKFRLKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 97 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 156 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 157 KMEGRDMWMVLKPK 170 >gi|83319316|ref|YP_424192.1| translation initiation factor IF-3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123753733|sp|Q2SSS1|IF3_MYCCT RecName: Full=Translation initiation factor IF-3 gi|83283202|gb|ABC01134.1| translation initiation factor IF-3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 181 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPS---VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 +++A+ NLDL ++ V P + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIAKSKNLDLYQV--GVQPDGTVITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRIT 102 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 103 VNIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKME 162 Query: 118 CEPKFEGRQMIMILSSK 134 E K G+ + M + K Sbjct: 163 KEAKLNGKFLDMYIVPK 179 >gi|300855256|ref|YP_003780240.1| putative translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] gi|300435371|gb|ADK15138.1| predicted translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] Length = 170 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E +DLV + P VCKI++ K Y K A +A+K QK +KEV++ I Sbjct: 36 LNMAREQGMDLVAVSPQAKPPVCKIMNYSKFLYEQSKKAKQAKKNQKIVELKEVRLSATI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D+++K FL G KVK+S++FRGR+ + LGR++ + E S ++ P Sbjct: 96 EENDIEIKANNARKFLAKGNKVKVSIRFRGRQNNYTSLGRKVFDTFLSKLDESSVVERAP 155 Query: 121 KFEGRQMIMILSSK 134 K EG M MIL+ K Sbjct: 156 KLEGNNMFMILAPK 169 >gi|148270333|ref|YP_001244793.1| translation initiation factor IF-3 [Thermotoga petrophila RKU-1] gi|147735877|gb|ABQ47217.1| bacterial translation initiation factor 3 (bIF-3) [Thermotoga petrophila RKU-1] Length = 150 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V KI+D K +Y Q + K+K+ +K++K R I Sbjct: 17 LELAKEKGLDLVLVAPNENPPVAKIMDYGKYKY--QLTKKQKENKKKTVQLKQMKFRLNI 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL +G KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 75 DEHDYQTKVKHIRRFLEEGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLAAVENPP 134 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 135 KMEGRDMWMVLKPK 148 >gi|332830448|gb|EGK03076.1| hypothetical protein HMPREF9455_01326 [Dysgonomonas gadei ATCC BAA-286] Length = 210 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 74/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVEI + P VC+I D +K Y +K EA+ K +KE++ P Sbjct: 43 LRLADDLELDLVEISPTADPPVCRITDYQKFLYQQKKKQKEAKAKSVKVVVKEIRFGPQT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL FL +G KVK V F+GR I+ ++ G LL ++ ++D P Sbjct: 103 DDHDFNFKLNHAKNFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFATELEDLGKVDQLP 162 Query: 121 KFEGRQMIMILSSK 134 EG++MIM+LS K Sbjct: 163 ALEGKKMIMMLSPK 176 >gi|42560771|ref|NP_975222.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|313665133|ref|YP_004047004.1| translation initiation factor IF-3 [Mycoplasma leachii PG50] gi|61213114|sp|Q6MU22|IF3_MYCMS RecName: Full=Translation initiation factor IF-3 gi|42492267|emb|CAE76864.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|256384415|gb|ACU78985.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. capri str. GM12] gi|256385247|gb|ACU79816.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455794|gb|ADH22029.1| translation initiation factor IF-3 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301321435|gb|ADK70078.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] gi|312949286|gb|ADR23882.1| translation initiation factor IF-3 [Mycoplasma leachii PG50] Length = 181 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPS---VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 +++A+ NLDL ++ V P + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIARSKNLDLYQV--GVQPDGTVITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRIT 102 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 103 VNIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKME 162 Query: 118 CEPKFEGRQMIMILSSK 134 E K G+ + M + K Sbjct: 163 KEAKLNGKFLDMYIVPK 179 >gi|260434416|ref|ZP_05788386.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109] gi|260412290|gb|EEX05586.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109] Length = 217 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVASDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRG EI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGLEIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPR 180 >gi|213156054|ref|YP_002318099.1| translation initiation factor IF-3 [Acinetobacter baumannii AB0057] gi|215484619|ref|YP_002326854.1| Translation initiation factor IF-3 [Acinetobacter baumannii AB307-0294] gi|239500700|ref|ZP_04660010.1| translation initiation factor IF-3 [Acinetobacter baumannii AB900] gi|213055214|gb|ACJ40116.1| translation initiation factor IF-3 [Acinetobacter baumannii AB0057] gi|213987801|gb|ACJ58100.1| Translation initiation factor IF-3 [Acinetobacter baumannii AB307-0294] Length = 106 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 57/84 (67%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 20 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 79 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E+ ++ PK EGRQM M+L K Sbjct: 80 AELGVVEQAPKMEGRQMGMLLGPK 103 >gi|331703217|ref|YP_004399904.1| translation initiation factor IF 3 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801772|emb|CBW53925.1| Translation initiation factor IF 3 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 181 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPS---VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 +++A+ NLDL ++ V P + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIARSKNLDLYQV--GVQPDGTVITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRIT 102 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 103 VNIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKME 162 Query: 118 CEPKFEGRQMIMILSSK 134 E K G+ + M + K Sbjct: 163 KEAKLNGKFLDMYIVPK 179 >gi|119358270|ref|YP_912914.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides DSM 266] gi|166198955|sp|A1BJB3|IF3_CHLPD RecName: Full=Translation initiation factor IF-3 gi|119355619|gb|ABL66490.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium phaeobacteroides DSM 266] Length = 209 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK+ +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RLAEEKNFDLIEVQPNADPPVCKLDNLGKLIYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDRGLELAERLTERLSCVSNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|54309338|ref|YP_130358.1| putative initiation factor IF3 [Photobacterium profundum SS9] gi|90410626|ref|ZP_01218642.1| putative initiation factor [Photobacterium profundum 3TCK] gi|46913774|emb|CAG20556.1| putative initiation factor IF3 [Photobacterium profundum SS9] gi|90328867|gb|EAS45151.1| putative initiation factor [Photobacterium profundum 3TCK] Length = 129 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G K K++++FRGRE+ HQ+LG +LL+ IK +++ + P + EGRQM Sbjct: 61 LRNLIRFLEEGNKGKVTLRFRGREMAHQNLGIDLLNRIKAELEDLAVCESFPHRVEGRQM 120 Query: 128 IMILSSK 134 M+L+ K Sbjct: 121 TMMLAPK 127 >gi|262382111|ref|ZP_06075249.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_33B] gi|262297288|gb|EEY85218.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_33B] Length = 208 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 D HD KLK GFL +G KVK V F+GR I+ ++ G LL +N E +G++ ++ Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQL- 157 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++MI++L+ K Sbjct: 158 --PVLEGKRMIIMLTPK 172 >gi|301310684|ref|ZP_07216623.1| translation initiation factor IF-3 [Bacteroides sp. 20_3] gi|300832258|gb|EFK62889.1| translation initiation factor IF-3 [Bacteroides sp. 20_3] Length = 208 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 D HD KLK GFL +G KVK V F+GR I+ ++ G LL +N E +G++ ++ Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQL- 157 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++MI++L+ K Sbjct: 158 --PVLEGKRMIIMLTPK 172 >gi|332885363|gb|EGK05612.1| hypothetical protein HMPREF9456_02414 [Dysgonomonas mossii DSM 22836] Length = 207 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 73/132 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLVEI + P VCKI D +K Y +K EA+ K +KE++ P Sbjct: 43 LRLADALELDLVEISPTAEPPVCKITDYQKFLYQQKKKQKEAKAKSVKVVVKEIRFGPQT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G K+K V F+GR I+ ++ G LL + ++D P Sbjct: 103 DDHDFNFKLKHAKGFLEEGSKLKAYVFFKGRSILFKEQGEVLLLRFATELEDYGKVDQLP 162 Query: 121 KFEGRQMIMILS 132 EG++MIM++S Sbjct: 163 ALEGKRMIMMMS 174 >gi|184156916|ref|YP_001845255.1| translation initiation factor 3 [Acinetobacter baumannii ACICU] gi|260556060|ref|ZP_05828279.1| translation initiation factor IF-3 [Acinetobacter baumannii ATCC 19606] gi|301346222|ref|ZP_07226963.1| translation initiation factor IF-3 [Acinetobacter baumannii AB056] gi|301510742|ref|ZP_07235979.1| translation initiation factor IF-3 [Acinetobacter baumannii AB058] gi|301596042|ref|ZP_07241050.1| translation initiation factor IF-3 [Acinetobacter baumannii AB059] gi|332856895|ref|ZP_08436304.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013150] gi|332867202|ref|ZP_08437467.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013113] gi|332874007|ref|ZP_08441942.1| translation initiation factor IF-3 [Acinetobacter baumannii 6014059] gi|183208510|gb|ACC55908.1| Translation initiation factor 3 (IF-3) [Acinetobacter baumannii ACICU] gi|193076380|gb|ABO11044.2| protein chain initiation factor IF-3 [Acinetobacter baumannii ATCC 17978] gi|260410115|gb|EEX03414.1| translation initiation factor IF-3 [Acinetobacter baumannii ATCC 19606] gi|322506812|gb|ADX02266.1| Translation initiation factor IF-3 [Acinetobacter baumannii 1656-2] gi|323516681|gb|ADX91062.1| translation initiation factor 3 [Acinetobacter baumannii TCDC-AB0715] gi|332726949|gb|EGJ58454.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013150] gi|332734141|gb|EGJ65273.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013113] gi|332737748|gb|EGJ68640.1| translation initiation factor IF-3 [Acinetobacter baumannii 6014059] Length = 112 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 57/84 (67%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E+ ++ PK EGRQM M+L K Sbjct: 86 AELGVVEQAPKMEGRQMGMLLGPK 109 >gi|148826979|ref|YP_001291732.1| translation initiation factor IF-3 [Haemophilus influenzae PittGG] gi|148718221|gb|ABQ99348.1| translation initiation factor IF-3 [Haemophilus influenzae PittGG] Length = 89 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K Sbjct: 3 VKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDL 62 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 EIS ++ P K EGRQ +M+L+ K Sbjct: 63 AEISVVESAPGKLEGRQAVMVLAPK 87 >gi|225013013|ref|ZP_03703429.1| initiation factor 3 [Flavobacteria bacterium MS024-2A] gi|225002829|gb|EEG40809.1| initiation factor 3 [Flavobacteria bacterium MS024-2A] Length = 152 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 77/132 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+ LDLVEI + +P VCKIL+ +K Y +K + K +KE++ P D Sbjct: 19 IAESLELDLVEISPNASPPVCKILEYKKFLYEQKKREKALKAKTSKIILKEIRFGPQTDE 78 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ P Sbjct: 79 HDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEELGKVEQMPIL 138 Query: 123 EGRQMIMILSSK 134 EG++M +++S K Sbjct: 139 EGKKMSILISPK 150 >gi|296108362|ref|YP_003620063.1| Translation initiation factor 3 (IF-3) [Legionella pneumophila 2300/99 Alcoy] gi|295650264|gb|ADG26111.1| Translation initiation factor 3 (IF-3) [Legionella pneumophila 2300/99 Alcoy] Length = 126 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 80/123 (65%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EA+KKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEAKKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLLMVL 120 Query: 132 SSK 134 S K Sbjct: 121 SPK 123 >gi|150007316|ref|YP_001302059.1| translation initiation factor IF-3 [Parabacteroides distasonis ATCC 8503] gi|255014059|ref|ZP_05286185.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_7] gi|256839605|ref|ZP_05545114.1| translation initiation factor IF-3 [Parabacteroides sp. D13] gi|298375302|ref|ZP_06985259.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_19] gi|166198961|sp|A6L9S3|IF3_PARD8 RecName: Full=Translation initiation factor IF-3 gi|149935740|gb|ABR42437.1| translation initiation factor IF-3 [Parabacteroides distasonis ATCC 8503] gi|256738535|gb|EEU51860.1| translation initiation factor IF-3 [Parabacteroides sp. D13] gi|298267802|gb|EFI09458.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_19] Length = 208 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 D HD KLK GFL +G KVK V F+GR I+ ++ G LL +N E +G++ ++ Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQL- 157 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++MI++L+ K Sbjct: 158 --PVLEGKRMIIMLTPK 172 >gi|189345704|ref|YP_001942233.1| translation initiation factor IF-3 [Chlorobium limicola DSM 245] gi|238692168|sp|B3EEC0|IF3_CHLL2 RecName: Full=Translation initiation factor IF-3 gi|189339851|gb|ACD89254.1| translation initiation factor IF-3 [Chlorobium limicola DSM 245] Length = 213 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 81/132 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ NLDL+E+ + P VCK+ +L KL + + K + +KKQK+T +KE++ P D Sbjct: 45 RMAEDRNLDLIEVQPNAEPPVCKLDNLGKLLFKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSCVSNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|87308766|ref|ZP_01090905.1| translation initiation factor [Blastopirellula marina DSM 3645] gi|87288477|gb|EAQ80372.1| translation initiation factor [Blastopirellula marina DSM 3645] Length = 154 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 2/132 (1%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLVE+ P VC+I+D K +Y Q+N + + KE+++RP H Sbjct: 23 ARAVGLDLVEVAPLAAPPVCRIMDYGKYKY--QQNKKQHKSHSHHAKTKEIRLRPKTGDH 80 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D++ K+K FL+ KV++S++FRGRE+ H D G ++ + E +++ PK Sbjct: 81 DIEFKVKQAITFLKHKDKVQVSIQFRGREMAHVDEGHRVMKQVIALLEEFGKVESTPKQM 140 Query: 124 GRQMIMILSSKC 135 GR+M+ ++ K Sbjct: 141 GRRMMCTIAPKT 152 >gi|157375258|ref|YP_001473858.1| translation initiation factor IF-3 [Shewanella sediminis HAW-EB3] gi|157317632|gb|ABV36730.1| translation initiation factor IF-3 [Shewanella sediminis HAW-EB3] Length = 111 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 57/81 (70%) Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 VK RP D +D QVKL+ ++ FL DG K K++++FRGRE+ HQ LG LL+ IK+ EI Sbjct: 29 VKFRPGTDENDYQVKLRNLNRFLDDGDKAKVTLRFRGREMAHQSLGMNLLNRIKDDLAEI 88 Query: 114 SRIDCEPKFEGRQMIMILSSK 134 + ++ PK EGRQ +M+L+ K Sbjct: 89 AVVESFPKMEGRQAVMVLAPK 109 >gi|171910818|ref|ZP_02926288.1| translation initiation factor IF-3 [Verrucomicrobium spinosum DSM 4136] Length = 212 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E +DLVEI +S P VCKI+D K +Y +K E+ K QK +KE+K R ID Sbjct: 1 MAKERGMDLVEISASADPPVCKIVDYGKYKYEQEKKKKESAKAQKGGKLKELKFRVGIDP 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +K+ + FL +G KV++ ++F+GR++ HQ++G +L I+E + +D +PK Sbjct: 61 HDYLIKIAHGEEFLSEGNKVRVQLQFKGRQMAHQEIGFQLARRIREDLLTMGHVDQDPKM 120 Query: 123 EGRQMIMILSS 133 GR + M +S Sbjct: 121 AGRNINMQISP 131 >gi|330813583|ref|YP_004357822.1| translation initiation factor 3 [Candidatus Pelagibacter sp. IMCC9063] gi|327486678|gb|AEA81083.1| translation initiation factor 3 [Candidatus Pelagibacter sp. IMCC9063] Length = 109 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 67/108 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y +QK A ARKKQK +KE+K+RPV D+HD K+K FL +G KVK + Sbjct: 1 MDSGKYKYELQKKANLARKKQKVILLKEIKLRPVTDVHDYDFKIKNAVKFLTNGDKVKFT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 +KF+GRE+ +L+ I E E+ +++ K EGRQM +I+ + Sbjct: 61 IKFKGREMEFIKAAYDLVRRIIEDVKEVGKVEQSAKMEGRQMTLIIQA 108 >gi|293610406|ref|ZP_06692707.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827638|gb|EFF86002.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124562|gb|ADY84085.1| protein chain initiation factor IF-3 [Acinetobacter calcoaceticus PHEA-2] Length = 112 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEFGVVEQAPKMEGRQMGMLLGPK 109 >gi|237821900|ref|ZP_04597745.1| translation initiation factor IF-3 [Streptococcus pneumoniae CCRI 1974M2] Length = 185 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 77/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I ++++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITNKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSSKC 135 +GRQM M L+ Sbjct: 170 DGRQMFMQLAPAT 182 >gi|32265942|ref|NP_859974.1| translation initiation factor IF-3 [Helicobacter hepaticus ATCC 51449] gi|39931233|sp|Q7VJ08|IF3_HELHP RecName: Full=Translation initiation factor IF-3 gi|32261991|gb|AAP77040.1| translation initiation factor IF3 [Helicobacter hepaticus ATCC 51449] Length = 174 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLV I + P VCKI+D K RY +K EARKKQK IKE+K+ I Sbjct: 36 LNLAHKAGLDLVLISPNAKPPVCKIMDYGKFRYQAEKKQKEARKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V + RE+ D G + L + +I+ + EP Sbjct: 96 AQNDINYKVKHAIEFLESGKHVKFKVFLKQRELNIPDAGMDTLGKVAVMLEDIAIAEKEP 155 Query: 121 KFEGRQMIMILSSK 134 K EG+ + ++ K Sbjct: 156 KLEGKHLNVLYVPK 169 >gi|304382818|ref|ZP_07365301.1| translation initiation factor IF3 [Prevotella marshii DSM 16973] gi|304336003|gb|EFM02250.1| translation initiation factor IF3 [Prevotella marshii DSM 16973] Length = 227 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 74/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+I+D K Y +K A E + KQ +KE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKKAKELKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DDHDYNFKLKHAKEFLEDGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSK 134 + EG++M + ++ K Sbjct: 158 RLEGKKMFLFIAPK 171 >gi|224438524|ref|ZP_03659444.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] gi|313144951|ref|ZP_07807144.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] gi|313129982|gb|EFR47599.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] Length = 174 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 71/134 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLV I + P VCKI+D K RY +K EARKKQK IKE+K+ I Sbjct: 36 LNLANQAGLDLVLISPNAKPPVCKIMDYGKFRYQAEKKQKEARKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V + RE+ G + L + +I+ D EP Sbjct: 96 AQNDINYKVKHAIEFLESGKHVKFKVFLKQRELSIPQAGMDTLHKVAAMLEDIAVADKEP 155 Query: 121 KFEGRQMIMILSSK 134 K EG+ + ++ K Sbjct: 156 KLEGKYLNVLYVPK 169 >gi|254446379|ref|ZP_05059855.1| translation initiation factor IF-3, C-terminal domain, putative [Verrucomicrobiae bacterium DG1235] gi|198260687|gb|EDY84995.1| translation initiation factor IF-3, C-terminal domain, putative [Verrucomicrobiae bacterium DG1235] Length = 200 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLVE+ + P VC+I+D K Y QK + ++ K S+ KEVK RP + Sbjct: 18 LEIALSGGLDLVEVAAQARPPVCRIMDFGKYVYEQQKKSKDS--KATSSKTKEVKFRPRV 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KL+ + FL G K+K+++ FRGRE+ H ++G E + + D +P Sbjct: 76 EQHDYETKLRRAELFLSKGNKLKLTLSFRGREMSHTEIGFETIRRAIVDLETMGHADNQP 135 Query: 121 KFEGRQMIMILS 132 + GR + +++S Sbjct: 136 RLVGRNINVMVS 147 >gi|295135445|ref|YP_003586121.1| translation initiation factor IF-3 [Zunongwangia profunda SM-A87] gi|294983460|gb|ADF53925.1| translation initiation factor IF-3 [Zunongwangia profunda SM-A87] Length = 148 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 71/133 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI P V K +D +K Y +K + K +KE++ P Sbjct: 10 LAIAEDLGLDLVEISPDAKPPVVKAMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL+DG K+K V F+GR I+ +D G LL + E +++ P Sbjct: 70 DDHDYEFKKRNAEKFLKDGAKLKAFVFFKGRSIVFKDKGEILLLRLATDLEEFGKVEQMP 129 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 130 KLEGKRMTMFMAP 142 >gi|299771534|ref|YP_003733560.1| translation initiation factor IF-3 [Acinetobacter sp. DR1] gi|298701622|gb|ADI92187.1| translation initiation factor IF-3 [Acinetobacter sp. DR1] Length = 112 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEYGVVEQAPKMEGRQMGMLLGPK 109 >gi|110638046|ref|YP_678254.1| translation initiation factor IF-3 [Cytophaga hutchinsonii ATCC 33406] gi|110280727|gb|ABG58913.1| bacterial translation initiation factor 3 (bIF-3) [Cytophaga hutchinsonii ATCC 33406] Length = 186 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ NLDLVEI + P VCK+ D K +Y +K E + KQ +KE++ P Sbjct: 48 LNIAKAQNLDLVEISPNADPPVCKVTDYSKFKYEQKKKQKELKAKQHKVVVKEIRFGPNT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL+DG KVK V F GR I++++ G +L + E+++++ P Sbjct: 108 DEHDYEFKLKHAFEFLKDGFKVKAYVHFVGRTIVYKERGEIMLLKFAQALEELAKVEEMP 167 Query: 121 KFEGRQMIMILSSKC 135 + EG++M ++L+ K Sbjct: 168 RLEGKRMFLMLTPKA 182 >gi|89891845|ref|ZP_01203346.1| translation initiation factor 3 [Flavobacteria bacterium BBFL7] gi|89515750|gb|EAS18551.1| translation initiation factor 3 [Flavobacteria bacterium BBFL7] Length = 130 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 69/126 (54%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI P V KI+D +K Y +K + IKE++ P D HD + K Sbjct: 3 LDLVEISPKADPPVAKIMDYKKFVYEQKKREKVMKANASKVVIKEIRFGPNTDDHDYEFK 62 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 K + FL++G K+K V F+GR I+++D G LL + E+ +++ PK EG++M Sbjct: 63 RKHAEKFLKEGAKLKAYVFFKGRSIIYKDQGEILLLRLARDLEELGKVEQMPKLEGKRMN 122 Query: 129 MILSSK 134 M L+ K Sbjct: 123 MFLAPK 128 >gi|260551942|ref|ZP_05825804.1| translation initiation factor 3 [Acinetobacter sp. RUH2624] gi|260405345|gb|EEW98840.1| translation initiation factor 3 [Acinetobacter sp. RUH2624] Length = 112 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEFGIVEQAPKMEGRQMGMLLGPK 109 >gi|145219005|ref|YP_001129714.1| translation initiation factor IF-3 [Prosthecochloris vibrioformis DSM 265] gi|189028355|sp|A4SCK3|IF3_PROVI RecName: Full=Translation initiation factor IF-3 gi|145205169|gb|ABP36212.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium phaeovibrioides DSM 265] Length = 209 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E N DL+E+ + P VCK +L KL + + + + +KKQK+T +KE++ P D Sbjct: 45 RMAEERNTDLIEVQPNAEPPVCKFDNLGKLLFKMAQRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER + D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSVVGNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|212550460|ref|YP_002308777.1| translation initiation factor IF-3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229485920|sp|B6YQ94|IF3_AZOPC RecName: Full=Translation initiation factor IF-3 gi|212548698|dbj|BAG83366.1| translation initiation factor IF-3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 183 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 74/136 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E LDL+EI + P VCKI D +K + +K+ E + K +KE++ P Sbjct: 39 LRMAGELELDLIEISPTAVPPVCKIFDYQKFIFQQKKHQKEQKVKLSKIVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL +G KVK V FRGR I+ ++ G LL + +++ P Sbjct: 99 DEHDYSFKLKHAKSFLEEGNKVKAYVFFRGRSILFKEQGEILLLRFANDLEDYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI+ L+ K V Sbjct: 159 ILEGKKMIITLAPKKV 174 >gi|78186012|ref|YP_374055.1| translation initiation factor IF-3 [Chlorobium luteolum DSM 273] gi|123771143|sp|Q3B6L9|IF3_PELLD RecName: Full=Translation initiation factor IF-3 gi|78165914|gb|ABB23012.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium luteolum DSM 273] Length = 206 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ N DL+E+ + P VCK +L KL Y + + + +KKQK+T +KE++ P D Sbjct: 45 RMAEDRNTDLIEVQPNAEPPVCKFDNLGKLLYKMAQRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER + + EPK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELADRLTERLSVVGNREGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|110598677|ref|ZP_01386942.1| translation initiation factor IF-3 [Chlorobium ferrooxidans DSM 13031] gi|110339730|gb|EAT58240.1| translation initiation factor IF-3 [Chlorobium ferrooxidans DSM 13031] Length = 213 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RVAEERNQDLIEVQPNAIPPVCKFDNLGKLLYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D EPK Sbjct: 105 KHDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSVVSTRDGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|262374307|ref|ZP_06067583.1| translation initiation factor IF-3 [Acinetobacter junii SH205] gi|262310865|gb|EEY91953.1| translation initiation factor IF-3 [Acinetobacter junii SH205] Length = 112 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILRFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEFGVVEQAPKMEGRQMGMLLGPK 109 >gi|34540736|ref|NP_905215.1| translation initiation factor IF-3 [Porphyromonas gingivalis W83] gi|39931198|sp|Q7MVQ6|IF3_PORGI RecName: Full=Translation initiation factor IF-3 gi|34397050|gb|AAQ66114.1| translation initiation factor IF-3 [Porphyromonas gingivalis W83] Length = 201 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 75/134 (55%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+ +LDLVEI + P VC++ D +K Y ++K A E + K IKE++ P D Sbjct: 41 IAESQDLDLVEISPNADPPVCRVTDYQKFVYQLKKKAKEQKAKSVKIVIKEIRFGPQTDD 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD KLK FL++G KVK V FRGR I+ ++ G LL + +R++ P Sbjct: 101 HDYNFKLKHAKEFLQEGSKVKAYVFFRGRSILFKEQGEVLLLRFANDLEDFARVEQMPIL 160 Query: 123 EGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 161 EGKRMTIMLTPKSA 174 >gi|226954308|ref|ZP_03824772.1| protein chain initiation factor IF-3 [Acinetobacter sp. ATCC 27244] gi|294649365|ref|ZP_06726796.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226834934|gb|EEH67317.1| protein chain initiation factor IF-3 [Acinetobacter sp. ATCC 27244] gi|292824735|gb|EFF83507.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 112 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILRFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEFGVVEQPPKMEGRQMGMLLGPK 109 >gi|222099843|ref|YP_002534411.1| Translation initiation factor IF-3 [Thermotoga neapolitana DSM 4359] gi|221572233|gb|ACM23045.1| Translation initiation factor IF-3 [Thermotoga neapolitana DSM 4359] Length = 177 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P V +I+D K +Y Q + K+K+ +K++K R I Sbjct: 44 LDLAREKGLDLVLVAPNADPPVARIMDYGKYKY--QLTKKQKENKKKAVQLKQMKFRLKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K++ I FL +G KV++ V F GRE+M D G+E+L + + +++ ++ P Sbjct: 102 DEHDYQTKVRHIRRFLEEGHKVRVVVMFIGREMMFTDKGKEILERVIKDTEDLAVVESPP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 162 KVEGRDMWMVLKPK 175 >gi|188994827|ref|YP_001929079.1| translation initiation factor IF-3 [Porphyromonas gingivalis ATCC 33277] gi|238691476|sp|B2RJD7|IF3_PORG3 RecName: Full=Translation initiation factor IF-3 gi|188594507|dbj|BAG33482.1| translation initiation factor IF-3 [Porphyromonas gingivalis ATCC 33277] Length = 212 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 76/135 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ +LDLVEI + P VC++ D +K Y ++K A E + K IKE++ P D Sbjct: 40 RIAESQDLDLVEISPNADPPVCRVTDYQKFVYQLKKKAKEQKAKSVKIVIKEIRFGPQTD 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL++G KVK V FRGR I+ ++ G LL + +R++ P Sbjct: 100 DHDYNFKLKHAKEFLQEGSKVKAYVFFRGRSILFKEQGEVLLLRFANDLEDFARVEQMPI 159 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 160 LEGKRMTIMLTPKSA 174 >gi|312132189|ref|YP_003999529.1| bacterial translation initiation factor 3 (bif-3) [Leadbetterella byssophila DSM 17132] gi|311908735|gb|ADQ19176.1| bacterial translation initiation factor 3 (bIF-3) [Leadbetterella byssophila DSM 17132] Length = 185 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ NLDLVEI + P VC+I+D K +Y +K E + KQ T IKE++ P Sbjct: 49 LEIAKAQNLDLVEIVPNSAPPVCRIVDYSKFKYEQKKKQKELKAKQVKTVIKEIRFGPQT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK + FL++ KVK V F GR+I+ ++ G +LL E ++ + + P Sbjct: 109 DDHDYEFKLKHAENFLKENSKVKAYVHFVGRQIVFKEQGFKLLERFTEALSDLGKPEAPP 168 Query: 121 KFEGRQMIMILSSK 134 K EG+++ +I++ K Sbjct: 169 KLEGKRLNVIIAPK 182 >gi|253681493|ref|ZP_04862290.1| translation initiation factor IF-3 [Clostridium botulinum D str. 1873] gi|253561205|gb|EES90657.1| translation initiation factor IF-3 [Clostridium botulinum D str. 1873] Length = 124 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/121 (42%), Positives = 76/121 (62%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 I ++ PSVCKI+D K Y K EA+KKQK IKE+++ P I+ HD+++K Sbjct: 2 ISANGNPSVCKIMDYGKYLYEQTKKVKEAKKKQKVVSIKEIRLSPTIEEHDIEIKANRTK 61 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL+D KVK++V+FRGRE + G+++L + G++ I+ + K EGR MIMIL+ Sbjct: 62 KFLQDENKVKVTVRFRGREADYSYKGKKILDLFVSKIGDVCVIEKQAKLEGRNMIMILAP 121 Query: 134 K 134 K Sbjct: 122 K 122 >gi|212697335|ref|ZP_03305463.1| hypothetical protein ANHYDRO_01904 [Anaerococcus hydrogenalis DSM 7454] gi|212675784|gb|EEB35391.1| hypothetical protein ANHYDRO_01904 [Anaerococcus hydrogenalis DSM 7454] Length = 188 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 81/132 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + +LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I+ H Sbjct: 54 AYDKHLDLVLMSPNAKPPVARIMDYGKFKYEQEKKAKENKKKQKTTQTKETRFSLNIEDH 113 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K FL +G KVK+SV+F+GRE+ H++LG +LL E G+ +++D +P E Sbjct: 114 DLETKANHTKKFLNNGDKVKVSVRFKGRELGHKNLGYDLLDKFMEFVGDCAQVDKKPAME 173 Query: 124 GRQMIMILSSKC 135 GR +++ +S Sbjct: 174 GRSLVLFISPNT 185 >gi|262281010|ref|ZP_06058793.1| translation initiation factor IF-3 [Acinetobacter calcoaceticus RUH2202] gi|262257910|gb|EEY76645.1| translation initiation factor IF-3 [Acinetobacter calcoaceticus RUH2202] Length = 112 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 56/84 (66%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 26 VKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEVDV 85 Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134 E ++ PK EGRQM M+L K Sbjct: 86 AEFGVVEQAPKMEGRQMGMLLGPK 109 >gi|325479631|gb|EGC82723.1| translation initiation factor IF-3 [Anaerococcus prevotii ACS-065-V-Col13] Length = 139 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 76/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA + LDLV + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 1 MDMAYDRKLDLVLMSPKAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNAQLKETRFSLNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K G+ ++ +P Sbjct: 61 EDNDLQTKANQSKKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFKTMLGDSYKVTKKP 120 Query: 121 KFEGRQMIMIL 131 K EGR ++M L Sbjct: 121 KMEGRSLVMFL 131 >gi|325847688|ref|ZP_08170011.1| translation initiation factor IF-3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480900|gb|EGC83952.1| translation initiation factor IF-3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 179 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + +LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I Sbjct: 42 LDRAYDKHLDLVLMSPNAKPPVARIMDYGKFKYEQEKKAKENKKKQKTTQTKETRFSLNI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K FL +G KVK+SV+F+GRE+ H++LG +LL E G+ +++D +P Sbjct: 102 EDHDLETKANQTKKFLNNGDKVKVSVRFKGRELGHKNLGYDLLDKFMEFVGDCAQVDKKP 161 Query: 121 KFEGRQMIMILSSKC 135 EGR +++ +S Sbjct: 162 AMEGRSLVLFISPNT 176 >gi|37526559|ref|NP_929903.1| translation initiation factor IF-3 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785990|emb|CAE15042.1| translation initiation factor IF-3 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 141 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VC+++D K Y K+ E +KKQK T +KEVK RP Sbjct: 5 LEKAKEEGVDLVEISPNAEPPVCRLMDYGKFLYEKSKSTKEQKKKQKVTKVKEVKFRPGT 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVK+ + FL + K K++++FRGRE+ HQ +G E+L ++ ++ ++ P Sbjct: 65 EEGDYQVKIGNLKRFLENSDKAKVTLRFRGREMAHQQIGIEMLDKVRNDLDGLAVVESFP 124 Query: 121 -KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 125 SKIEGRQMVMVLAPK 139 >gi|56417256|ref|YP_154330.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|222475620|ref|YP_002564037.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] gi|254995425|ref|ZP_05277615.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Mississippi] gi|255003613|ref|ZP_05278577.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Puerto Rico] gi|255004742|ref|ZP_05279543.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Virginia] gi|56388488|gb|AAV87075.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|222419758|gb|ACM49781.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] Length = 177 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 78/131 (59%), Gaps = 2/131 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVE+ S +CKI + K +Y +K+ K+ +S+ +KE+K R I Sbjct: 36 IAMAREAELDLVEVVSEGEFPICKIFNYSKQKYNKKKSG--GPKRSRSSSLKELKFRLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + GF+ G KVK+S++F GRE+ ++++G +L + ++R + P Sbjct: 94 EDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSP 153 Query: 121 KFEGRQMIMIL 131 + +G M M+ Sbjct: 154 RMDGNVMSMVF 164 >gi|293401373|ref|ZP_06645516.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305011|gb|EFE46257.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 193 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + P VCK+LD K + QK A EA+KKQ T +K +++ PVI Sbjct: 58 LEIAYNQELDLLCVAPKAQPPVCKVLDYGKYHFEQQKKAKEAKKKQHVTEVKPIRLSPVI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ I+ +P Sbjct: 118 DRHDFETKMRHARKWIEDGMKVKVDMRFRGRLITRLEVGKKIMNSFTEEISDIAVIEKKP 177 Query: 121 KFEGRQMIMILSSK 134 EG M +L+ K Sbjct: 178 ILEGNTMSCVLAPK 191 >gi|182416356|ref|YP_001821422.1| translation initiation factor IF-3 [Opitutus terrae PB90-1] gi|177843570|gb|ACB77822.1| translation initiation factor IF-3 [Opitutus terrae PB90-1] Length = 221 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVE+ + TP VC+I+D K Y QK + K ++ IKE++ I Sbjct: 57 INLALENGLDLVEVAPNATPPVCRIMDFGKYVYEEQKKHTHS--KSTASKIKEIEFSARI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D KL+ + FL G KVK+ +KFRGRE+ H ++G ++ + D +P Sbjct: 115 AENDFFTKLRHAEQFLSHGNKVKLRLKFRGREMAHTEIGFNVMKRAVIELAGMGHPDADP 174 Query: 121 KFEGRQMIMILSSKCV 136 K GR + ++LS V Sbjct: 175 KLIGRNIHVMLSPLPV 190 >gi|57239616|ref|YP_180752.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58579606|ref|YP_197818.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58617660|ref|YP_196859.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Gardel] gi|75507493|sp|Q5FGP0|IF3_EHRRG RecName: Full=Translation initiation factor IF-3 gi|81672765|sp|Q5H9Z3|IF3_EHRRW RecName: Full=Translation initiation factor IF-3 gi|57161695|emb|CAH58625.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58417272|emb|CAI28385.1| Translation initiation factor IF-3 [Ehrlichia ruminantium str. Gardel] gi|58418232|emb|CAI27436.1| Translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] Length = 173 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I + Sbjct: 43 ARSVNLDLVEIVHDDEYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNIGDN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL I GF+ G KVKIS+KF GREI+H ++G E++ + + +I++ + PK E Sbjct: 103 DYNVKLNMIRGFIERGDKVKISLKFIGREILHPEVGMEIIERLIKDTSDIAKPENLPKRE 162 Query: 124 GRQMIMILSSK 134 G + MIL++K Sbjct: 163 GNLINMILTTK 173 >gi|77412758|ref|ZP_00788981.1| translation initiation factor IF-3 [Streptococcus agalactiae CJB111] gi|77161191|gb|EAO72279.1| translation initiation factor IF-3 [Streptococcus agalactiae CJB111] Length = 168 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 75/123 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIXIIEQRAKM 160 Query: 123 EGR 125 +GR Sbjct: 161 DGR 163 >gi|331269137|ref|YP_004395629.1| translation initiation factor IF-3 [Clostridium botulinum BKT015925] gi|329125687|gb|AEB75632.1| translation initiation factor IF-3 [Clostridium botulinum BKT015925] Length = 124 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 51/121 (42%), Positives = 76/121 (62%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 I ++ PSVCKI+D K Y K EA+KKQK IKE+++ P I+ HD+++K Sbjct: 2 ISANGNPSVCKIMDYGKYLYEQTKKVKEAKKKQKIVSIKEIRLSPTIEEHDIEIKANRTK 61 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL+D KVK++V+FRGRE + G+++L + G++ I+ + K EGR MIMIL+ Sbjct: 62 KFLQDENKVKVTVRFRGREADYSYKGKKILDLFVSKIGDVCIIEKQAKLEGRNMIMILAP 121 Query: 134 K 134 K Sbjct: 122 K 122 >gi|329296184|ref|ZP_08253520.1| translation initiation factor IF-3 [Plautia stali symbiont] Length = 113 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE Sbjct: 26 VKEIKFRPSTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKEDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+ + K Sbjct: 86 NELAVVESFPTKIEGRQMIMVFAPK 110 >gi|148273192|ref|YP_001222753.1| translation initiation factor IF-3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831122|emb|CAN02074.1| translation initiation factor IF-3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 139 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 60/107 (56%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EAR+ Q +T +KEV+ R ID HD + K K +GFL+DG KVK Sbjct: 1 MDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKIDKHDYETKRKRAEGFLQDGDKVKAM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE D G LL E E ++ P +GR M+M++ Sbjct: 61 ILFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIG 107 >gi|311747150|ref|ZP_07720935.1| translation initiation factor IF-3 [Algoriphagus sp. PR1] gi|126578859|gb|EAZ83023.1| translation initiation factor IF-3 [Algoriphagus sp. PR1] Length = 184 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVEI +V P VCKILD K +Y +K E + +KE++ P Sbjct: 47 IRLAQENDLDLVEISPNVDPPVCKILDYAKFKYEQKKKQKEIKANAAKVVLKEIRFGPNT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K FL++G KVK V F GR I+ ++ G LL + E ++ P Sbjct: 107 DDHDFNFKVKHAINFLKEGAKVKAYVHFVGRTIVFKERGEMLLLKFAQALEEYGAVEQLP 166 Query: 121 KFEGRQMIMILSSKC 135 K EG++M + ++ K Sbjct: 167 KMEGKRMNIFVAPKA 181 >gi|288549544|ref|ZP_05967374.2| translation initiation factor IF-3 [Enterobacter cancerogenus ATCC 35316] gi|288318329|gb|EFC57267.1| translation initiation factor IF-3 [Enterobacter cancerogenus ATCC 35316] Length = 113 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ Sbjct: 26 VKEIKFRPGTDDGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLTRVRDDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+L+ K Sbjct: 86 SELAVVESFPTKIEGRQMIMVLAPK 110 >gi|291277002|ref|YP_003516774.1| translation initiation factor IF-3 [Helicobacter mustelae 12198] gi|290964196|emb|CBG40042.1| translation initiation factor IF-3 [Helicobacter mustelae 12198] Length = 185 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 71/133 (53%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLV I + P VCK++D K RY ++K EARKKQK IKE+K+ I Sbjct: 37 KIANSKGLDLVLISPNANPPVCKVMDYGKYRYQLEKKQKEARKKQKQIEIKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F+ + VK V +GRE G E+L I +I+ + EP+ Sbjct: 97 QNDINYKVKHAREFIAEQKHVKFKVVLKGRETSDPQGGFEVLRRIAGMVEDIATPEKEPR 156 Query: 122 FEGRQMIMILSSK 134 EGR +I + K Sbjct: 157 VEGRYVIWLFVPK 169 >gi|269958354|ref|YP_003328141.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] gi|269848183|gb|ACZ48827.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] Length = 177 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 2/131 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+ S VCKI + K +Y +K+ +K KS+ +KE+K R I Sbjct: 36 IATAREAELDLVEVVSDGELPVCKIFNYSKQKYNKKKSV--GPRKNKSSSLKELKFRLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + GF+ G KVK+S++F GRE+ ++++G +L + ++R + P Sbjct: 94 EDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSP 153 Query: 121 KFEGRQMIMIL 131 + +G M M+ Sbjct: 154 RMDGNVMSMVF 164 >gi|107102274|ref|ZP_01366192.1| hypothetical protein PaerPA_01003331 [Pseudomonas aeruginosa PACS2] Length = 112 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 59/89 (66%) Query: 46 QKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSN 105 QK +KE+K RP + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL Sbjct: 21 QKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKR 80 Query: 106 IKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++ E ++ PK EGRQ++M+++ K Sbjct: 81 VEADLVEYGTVEQHPKLEGRQLMMVIAPK 109 >gi|212635268|ref|YP_002311793.1| Initiation factor 3 [Shewanella piezotolerans WP3] gi|212556752|gb|ACJ29206.1| Initiation factor 3 [Shewanella piezotolerans WP3] Length = 111 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 56/82 (68%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D +D QVKL+ + FL DG K K++++FRGRE+ HQ LG +LL+ IK Sbjct: 28 EIKFRPGTDENDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQSLGMDLLNRIKADLEA 87 Query: 113 ISRIDCEPKFEGRQMIMILSSK 134 I+ ++ PK EGRQ +M+L+ K Sbjct: 88 IAVVESFPKMEGRQAVMVLAPK 109 >gi|254519562|ref|ZP_05131618.1| translation initiation factor IF-3 [Clostridium sp. 7_2_43FAA] gi|226913311|gb|EEH98512.1| translation initiation factor IF-3 [Clostridium sp. 7_2_43FAA] Length = 153 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 79/133 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VC+I+DL K Y K EA+KKQK T +KE++ I+ Sbjct: 19 RIADEKELDLVMISPNANPPVCRIMDLGKYIYEQSKKEKEAKKKQKITTLKEIRCSLTIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ +K K FL DG KVKI+V+F+GRE +G+++L N + ++ ++ K Sbjct: 79 ENDIAIKAKNAKKFLLDGDKVKITVRFKGREAQLGHIGQKILDNFVSKLEDVCVVEKPAK 138 Query: 122 FEGRQMIMILSSK 134 EGR M M+L K Sbjct: 139 HEGRNMTMVLGPK 151 >gi|256545525|ref|ZP_05472885.1| translation initiation factor IF-3 [Anaerococcus vaginalis ATCC 51170] gi|256398736|gb|EEU12353.1| translation initiation factor IF-3 [Anaerococcus vaginalis ATCC 51170] Length = 184 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I Sbjct: 47 LDIAYDKQLDLVLMSPNAKPPVARIMDYGKFKYDQEKKAKENKKKQKTTQTKETRFSLNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K FL +G KVK+S++F+GRE+ H++LG ++L E G+ +++D +P Sbjct: 107 EDHDLATKANQTKKFLNNGDKVKVSLRFKGRELGHKNLGYDVLDKFMEFVGDCAQVDKKP 166 Query: 121 KFEGRQMIMILSSKC 135 EGR +++ +S K Sbjct: 167 AMEGRSLVLFISPKT 181 >gi|227501358|ref|ZP_03931407.1| translation initiation factor IF3 [Anaerococcus tetradius ATCC 35098] gi|227216457|gb|EEI81867.1| translation initiation factor IF3 [Anaerococcus tetradius ATCC 35098] Length = 145 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLV + + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 7 LDMAYDKKLDLVLMSPNAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNIQLKETRFSLNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K+ G+ ++ P Sbjct: 67 EDNDLQTKANQSKKFLNNGDKVKVSIRFRGRELGRKEPGYELMEKFKQMLGDSCKLTKSP 126 Query: 121 KFEGRQMIMIL 131 K EGR ++M L Sbjct: 127 KMEGRSLVMFL 137 >gi|227355316|ref|ZP_03839717.1| initiation factor IF3 [Proteus mirabilis ATCC 29906] gi|227164540|gb|EEI49411.1| initiation factor IF3 [Proteus mirabilis ATCC 29906] Length = 112 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KEVK RP D D QVKL+ + FL DG K K++ Sbjct: 1 MDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSK 134 ++FRGRE+ HQ +G E+L+ I+E E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEMLNRIREDLDELASVESFPNKIEGRQMIMVLAPK 110 >gi|152970728|ref|YP_001335837.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955577|gb|ABR77607.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 113 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ Sbjct: 26 VKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+L+ K Sbjct: 86 VELAVVESFPTKIEGRQMIMVLAPK 110 >gi|326382697|ref|ZP_08204388.1| translation initiation factor IF-3 [Gordonia neofelifaecis NRRL B-59395] gi|326198816|gb|EGD55999.1| translation initiation factor IF-3 [Gordonia neofelifaecis NRRL B-59395] Length = 126 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 64/111 (57%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 +CKI+D K +Y + E+R+ Q+ T IKE K+RP ID HD + K + FL G K Sbjct: 1 MCKIMDYGKFKYEAAQKKRESRRNQQMTVIKEQKLRPKIDDHDYETKKGHVIRFLEAGSK 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 VK+++ FRGRE +LG LL + + E ++ K +GR M M+L+ Sbjct: 61 VKVTIMFRGREQSRPELGYRLLQRLGDDVAEYGFVETSAKQDGRNMTMVLA 111 >gi|296102766|ref|YP_003612912.1| translation initiation factor IF-3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057225|gb|ADF61963.1| translation initiation factor IF-3 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 113 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ Sbjct: 26 VKEIKFRPGTDDGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRDDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+L+ K Sbjct: 86 SELAVVESFPTKIEGRQMIMVLAPK 110 >gi|268678724|ref|YP_003303155.1| translation initiation factor IF-3 [Sulfurospirillum deleyianum DSM 6946] gi|268616755|gb|ACZ11120.1| translation initiation factor IF-3 [Sulfurospirillum deleyianum DSM 6946] Length = 171 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 73/131 (55%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A E LDLV I P VCKI++ K +Y +K EARK QK +KE+K+ I + Sbjct: 40 ADELGLDLVLIAPDAKPPVCKIMNYGKFKYQQEKKLKEARKNQKIIEVKEIKLSVKIASN 99 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D+ K+K FL +G V+ V RGRE+ + + G ++L ++ +I+ + PK E Sbjct: 100 DINYKIKHAREFLEEGKHVRFRVFLRGREMANPEAGEQVLESLWPMLEDIAEREKTPKLE 159 Query: 124 GRQMIMILSSK 134 GR + M+++ K Sbjct: 160 GRYINMLVTPK 170 >gi|194335336|ref|YP_002017130.1| translation initiation factor IF-3 [Pelodictyon phaeoclathratiforme BU-1] gi|194307813|gb|ACF42513.1| translation initiation factor IF-3 [Pelodictyon phaeoclathratiforme BU-1] Length = 210 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK +L +L Y + K + +KKQK+T +KE++ P D Sbjct: 45 RVAEERNQDLIEVQPNAEPPVCKFDNLGRLLYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSIVSTRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|332667085|ref|YP_004449873.1| translation initiation factor IF-3 [Haliscomenobacter hydrossis DSM 1100] gi|332335899|gb|AEE53000.1| Translation initiation factor IF-3 [Haliscomenobacter hydrossis DSM 1100] Length = 214 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 74/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+++ LDLVEI + P V +I+D K Y +K E + K T IKE++ P Sbjct: 78 LQWAEKSELDLVEISPNAVPPVVRIIDYNKFLYEKKKKEKEIKAKAAKTVIKEIRFGPNT 137 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ FL + KVK V FRGR I+ +D G LL + E + P Sbjct: 138 DDHDFEFKVRHAKTFLEENAKVKAYVNFRGRTIVFKDRGELLLLKFLKELEEFGSPESLP 197 Query: 121 KFEGRQMIMILSSK 134 K EGR+MI++++ K Sbjct: 198 KLEGRRMIVMIAPK 211 >gi|226330397|ref|ZP_03805915.1| hypothetical protein PROPEN_04315 [Proteus penneri ATCC 35198] gi|225201192|gb|EEG83546.1| hypothetical protein PROPEN_04315 [Proteus penneri ATCC 35198] Length = 112 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KEVK RP D D QVKL+ + FL DG K K++ Sbjct: 1 MDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSK 134 ++FRGRE+ HQ +G E+L+ I+E E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEMLNRIREDLDELAAVESFPNKIEGRQMIMVLAPK 110 >gi|325336814|gb|ADZ13088.1| Translation initiation factor 3 (IF-3) [Riemerella anatipestifer RA-GD] Length = 163 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 76/133 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV I P + +I+D +K Y +K E + KQ +KE++ P D Sbjct: 28 ELAEEQELDLVVISDKAEPFIARIMDYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 87 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 88 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIVFKDQGEILLLKLAQDLEHVGKVDQLPK 147 Query: 122 FEGRQMIMILSSK 134 EG++MIM++S K Sbjct: 148 LEGKRMIMMMSPK 160 >gi|313205744|ref|YP_004044921.1| bacterial translation initiation factor 3 (bif-3) [Riemerella anatipestifer DSM 15868] gi|312445060|gb|ADQ81415.1| bacterial translation initiation factor 3 (bIF-3) [Riemerella anatipestifer DSM 15868] gi|315022860|gb|EFT35884.1| Translation initiation factor 3 [Riemerella anatipestifer RA-YM] Length = 165 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 76/133 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV I P + +I+D +K Y +K E + KQ +KE++ P D Sbjct: 30 ELAEEQELDLVVISDKAEPFIARIMDYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 90 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIVFKDQGEILLLKLAQDLEHVGKVDQLPK 149 Query: 122 FEGRQMIMILSSK 134 EG++MIM++S K Sbjct: 150 LEGKRMIMMMSPK 162 >gi|150016445|ref|YP_001308699.1| translation initiation factor IF-3 [Clostridium beijerinckii NCIMB 8052] gi|149902910|gb|ABR33743.1| translation initiation factor IF-3 [Clostridium beijerinckii NCIMB 8052] Length = 185 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E ++DLV + + P VC+I+D K Y K +A+KKQK IKEV+ I+ Sbjct: 51 KLAEEKDMDLVMMSPTAKPPVCRIMDYGKYVYEQSKKEKDAKKKQKIISIKEVRCSLTIE 110 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ +K K FL +G KVKI+V+FRGRE+ +G+++L N + ++ ++ PK Sbjct: 111 EHDIDIKAKNARKFLLEGDKVKITVRFRGREMELAHMGQKILDNFAAKLEDVCLVEKRPK 170 Query: 122 FEGRQMIMILSSK 134 EGR M M+L K Sbjct: 171 REGRNMTMVLGPK 183 >gi|88607227|ref|YP_505782.1| translation initiation factor IF-3 [Anaplasma phagocytophilum HZ] gi|88598290|gb|ABD43760.1| translation initiation factor IF-3 [Anaplasma phagocytophilum HZ] Length = 172 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A +DLVE+ S VCK+ + K +Y +K+ V KKQ+S+ +KE+K R I Sbjct: 36 LAVAARAGMDLVEVVSEGEYPVCKVYNYSKQKYNKKKHGVT--KKQRSSAVKELKFRINI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + F+ G KVK+S++F GRE+ ++++G ++L + I++ + P Sbjct: 94 EDNDYNIKLNNLKSFIEKGNKVKVSLRFVGRELQYKEVGLDILDRLVSDTEGIAKPESSP 153 Query: 121 KFEGRQMIMILSSKC 135 + +G + M+ +K Sbjct: 154 RMDGNVLSMMFGAKT 168 >gi|227488133|ref|ZP_03918449.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541530|ref|ZP_03971579.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51866] gi|227091995|gb|EEI27307.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182686|gb|EEI63658.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51866] Length = 114 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 61/107 (57%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EARK Q+ T +KE K+RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKYKYEQAQKAREARKNQQQTVVKEQKLRPKIDDHDYETKKGNVVRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE +LG LL + E + ++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPELGYRLLERLAEDVKDYGTVESRPKQDGRNMTMVLG 107 >gi|257066832|ref|YP_003153088.1| translation initiation factor IF-3 [Anaerococcus prevotii DSM 20548] gi|256798712|gb|ACV29367.1| translation initiation factor IF-3 [Anaerococcus prevotii DSM 20548] Length = 184 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA ++ LDLV + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 46 LDMAYDSKLDLVLMSPKAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNAQLKETRFSLNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K G+ ++ +P Sbjct: 106 EDNDLQTKANQSMKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFKTMLGDSYKVSKKP 165 Query: 121 KFEGRQMIMIL 131 K EGR ++M L Sbjct: 166 KMEGRSLVMFL 176 >gi|302874880|ref|YP_003843513.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] gi|307690503|ref|ZP_07632949.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] gi|302577737|gb|ADL51749.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] Length = 175 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV I + P V KI++L K Y K A+K QK IKE+++ I+ HD+++K Sbjct: 48 DLVLIAPTANPPVAKIMNLNKFIYEQSKKEKLAKKNQKVIEIKEIRLSATIEDHDIEIKA 107 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF-GEISRIDCEPKFEGRQMI 128 FL DG KVK++V+FRGRE + G ++L + E+ ++ + K EGR M Sbjct: 108 NRASKFLADGDKVKVTVRFRGREADYAFKGNDVLDIFVSKIDSEVYIVEKKAKLEGRNMT 167 Query: 129 MILSSK 134 M+L+ K Sbjct: 168 MVLAPK 173 >gi|313649262|gb|EFS13696.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|320173199|gb|EFW48410.1| Translation initiation factor 3 [Shigella dysenteriae CDC 74-1112] gi|332758652|gb|EGJ88971.1| translation initiation factor IF-3 [Shigella flexneri 2747-71] gi|332759228|gb|EGJ89537.1| translation initiation factor IF-3 [Shigella flexneri K-671] gi|332762543|gb|EGJ92808.1| translation initiation factor IF-3 [Shigella flexneri 4343-70] gi|332767219|gb|EGJ97414.1| protein chain initiation factor IF-3 [Shigella flexneri 2930-71] gi|333003770|gb|EGK23306.1| translation initiation factor IF-3 [Shigella flexneri VA-6] gi|333004337|gb|EGK23868.1| translation initiation factor IF-3 [Shigella flexneri K-218] gi|333018197|gb|EGK37499.1| translation initiation factor IF-3 [Shigella flexneri K-304] Length = 113 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ Sbjct: 26 VKEIKFRPSTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+L+ K Sbjct: 86 QELAVVESFPTKIEGRQMIMVLAPK 110 >gi|309778344|ref|ZP_07673270.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 3_1_53] gi|313899539|ref|ZP_07833048.1| translation initiation factor IF-3 [Clostridium sp. HGF2] gi|308913910|gb|EFP59724.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 3_1_53] gi|312955646|gb|EFR37305.1| translation initiation factor IF-3 [Clostridium sp. HGF2] Length = 186 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + P VCK+LD + R+ QK A EA+KKQ T IK +++ PVI Sbjct: 51 LEIAYRQELDLLCVAPKGQPPVCKVLDYGRYRFEQQKKAKEAKKKQHVTEIKPIRLSPVI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ I+ P Sbjct: 111 DKHDFDTKMRHARKWIEDGMKVKVDMRFRGRLITRLEVGKKIMNSFTEEISDIAIIEKRP 170 Query: 121 KFEGRQMIMILSSK 134 EG M +L+ K Sbjct: 171 ILEGNTMSCVLAPK 184 >gi|167751463|ref|ZP_02423590.1| hypothetical protein EUBSIR_02459 [Eubacterium siraeum DSM 15702] gi|167655271|gb|EDR99400.1| hypothetical protein EUBSIR_02459 [Eubacterium siraeum DSM 15702] Length = 198 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA+LDLV I S TP VC+I+D K R+ K E++K QK +KE++M I Sbjct: 45 LDMAIEADLDLVLIAPSATPPVCRIMDYGKFRFEQSKKEKESKKNQKQAELKEIQMSLNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKF-RGREIMHQDLGRELLSNIKERFGEISRIDCE 119 D +D K FL++G KV+I V++ R RE+ H +LG EL+ + E E + Sbjct: 105 DTNDFNTKANQAIKFLKNGDKVRIKVRYRRARELSHANLGEELMQRVLEAVSEYGACEKP 164 Query: 120 PKFEGRQMIMILS 132 K EG+ + +++ Sbjct: 165 AKLEGKNYMAVVA 177 >gi|299117169|emb|CBN75133.1| conserved unknown protein [Ectocarpus siliculosus] Length = 288 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A + LDLV I P V KI+D K +Y + + + K K+T +KEVKM I Sbjct: 153 LQRASDEGLDLVMITKDAQPPVVKIIDYGKFKYKRDRRKKDNKAKHKATEMKEVKMSYKI 212 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V+L+ F++ G +V+I V FRGRE H DLG LL + ++ + EP Sbjct: 213 ETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALV--EP 270 Query: 121 K-FEGRQMIMILSSK 134 K EG ++ MI+ K Sbjct: 271 KRREGNRLSMIVFPK 285 >gi|254457526|ref|ZP_05070954.1| translation initiation factor IF-3 [Campylobacterales bacterium GD 1] gi|207086318|gb|EDZ63602.1| translation initiation factor IF-3 [Campylobacterales bacterium GD 1] Length = 163 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 70/134 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E +DLV I + P V KI+D K RY +K E RK Q +KE+K+ I Sbjct: 29 MSKANELGMDLVLIAPTAKPPVAKIMDYGKYRYQEEKKLKEQRKNQVKIVVKEIKLSVKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + G+E+L + ++ ++ P Sbjct: 89 AENDIAYKVKHAREFLEKGFHVKFRVFLRGREMAHPEAGKEVLLRVWPMVEDLGIMEKPP 148 Query: 121 KFEGRQMIMILSSK 134 KFEGR M ++ + Sbjct: 149 KFEGRYFNMYVTPQ 162 >gi|255534997|ref|YP_003095368.1| Translation initiation factor 3 [Flavobacteriaceae bacterium 3519-10] gi|255341193|gb|ACU07306.1| Translation initiation factor 3 [Flavobacteriaceae bacterium 3519-10] Length = 168 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P + +ILD +K Y +K E + KQ +KE++ P Sbjct: 31 LEIAKDQELDLVVISDKAEPYISRILDYKKFLYEQKKKTKELKAKQVKVVVKEIRFGPQT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D P Sbjct: 91 DDHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIIFKDQGEILLLKLAQELEHVGKVDQLP 150 Query: 121 KFEGRQMIMILSSK 134 K EG++MIM++S K Sbjct: 151 KLEGKRMIMMMSPK 164 >gi|114563198|ref|YP_750711.1| initiation factor 3 [Shewanella frigidimarina NCIMB 400] gi|114334491|gb|ABI71873.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella frigidimarina NCIMB 400] Length = 111 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 56/81 (69%) Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 +K RP D +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E Sbjct: 29 IKFRPGTDENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLEEY 88 Query: 114 SRIDCEPKFEGRQMIMILSSK 134 + ++ PK EGRQ IM+L+ K Sbjct: 89 AVVESFPKMEGRQAIMVLAPK 109 >gi|307721909|ref|YP_003893049.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas autotrophica DSM 16294] gi|306980002|gb|ADN10037.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas autotrophica DSM 16294] Length = 172 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 69/134 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E LDLV I + P V KI+D K +Y +K E RK Q +KE+K+ I Sbjct: 38 MTKANEMGLDLVLIAPNAKPPVAKIMDYGKFKYQEEKKLKEQRKNQVKIVVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + +E+L + +I+ ++ P Sbjct: 98 AENDIAYKVKHAREFLEKGFHVKFRVFLRGREMAHPEAAKEVLMQVWPMVEDIAVMEKPP 157 Query: 121 KFEGRQMIMILSSK 134 KFEGR M + K Sbjct: 158 KFEGRYYNMYVVPK 171 >gi|161614259|ref|YP_001588224.1| hypothetical protein SPAB_02004 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224584155|ref|YP_002637953.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|256018089|ref|ZP_05431954.1| translation initiation factor IF-3 [Shigella sp. D9] gi|256022618|ref|ZP_05436483.1| translation initiation factor IF-3 [Escherichia sp. 4_1_40B] gi|301025269|ref|ZP_07188834.1| translation initiation factor IF-3 [Escherichia coli MS 196-1] gi|306815029|ref|ZP_07449185.1| translation initiation factor IF-3 [Escherichia coli NC101] gi|307138377|ref|ZP_07497733.1| translation initiation factor IF-3 [Escherichia coli H736] gi|309788454|ref|ZP_07683058.1| translation initiation factor IF-3 [Shigella dysenteriae 1617] gi|312966920|ref|ZP_07781138.1| translation initiation factor IF-3 [Escherichia coli 2362-75] gi|312969745|ref|ZP_07783928.1| translation initiation factor IF-3 [Escherichia coli 1827-70] gi|161363623|gb|ABX67391.1| hypothetical protein SPAB_02004 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224468682|gb|ACN46512.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|299880134|gb|EFI88345.1| translation initiation factor IF-3 [Escherichia coli MS 196-1] gi|305851677|gb|EFM52130.1| translation initiation factor IF-3 [Escherichia coli NC101] gi|308923836|gb|EFP69339.1| translation initiation factor IF-3 [Shigella dysenteriae 1617] gi|310338030|gb|EFQ03119.1| translation initiation factor IF-3 [Escherichia coli 1827-70] gi|312288384|gb|EFR16286.1| translation initiation factor IF-3 [Escherichia coli 2362-75] gi|315618915|gb|EFU99498.1| translation initiation factor IF-3 [Escherichia coli 3431] gi|320181254|gb|EFW56173.1| Translation initiation factor 3 [Shigella boydii ATCC 9905] gi|320188405|gb|EFW63067.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. EC1212] gi|320194571|gb|EFW69202.1| Translation initiation factor 3 [Escherichia coli WV_060327] gi|320197901|gb|EFW72509.1| Translation initiation factor 3 [Escherichia coli EC4100B] gi|320641566|gb|EFX10954.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. G5101] gi|320646925|gb|EFX15758.1| translation initiation factor IF-3 [Escherichia coli O157:H- str. 493-89] gi|320652207|gb|EFX20505.1| translation initiation factor IF-3 [Escherichia coli O157:H- str. H 2687] gi|321223962|gb|EFX49025.1| Translation initiation factor 3 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323153044|gb|EFZ39313.1| translation initiation factor IF-3 [Escherichia coli EPECa14] gi|323158485|gb|EFZ44501.1| translation initiation factor IF-3 [Escherichia coli E128010] gi|323169353|gb|EFZ55029.1| translation initiation factor IF-3 [Shigella sonnei 53G] gi|323175214|gb|EFZ60828.1| translation initiation factor IF-3 [Escherichia coli LT-68] gi|323180496|gb|EFZ66041.1| translation initiation factor IF-3 [Escherichia coli 1180] gi|323186266|gb|EFZ71618.1| translation initiation factor IF-3 [Escherichia coli 1357] gi|323186900|gb|EFZ72218.1| translation initiation factor IF-3 [Escherichia coli RN587/1] gi|325497121|gb|EGC94980.1| translation initiation factor IF-3 [Escherichia fergusonii ECD227] gi|326342085|gb|EGD65866.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. 1044] gi|326343637|gb|EGD67399.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. 1125] gi|327252834|gb|EGE64488.1| translation initiation factor IF-3 [Escherichia coli STEC_7v] gi|330911522|gb|EGH40032.1| translation initiation factor 3 [Escherichia coli AA86] gi|332090643|gb|EGI95738.1| translation initiation factor IF-3 [Shigella boydii 5216-82] gi|332093967|gb|EGI99020.1| translation initiation factor IF-3 [Shigella dysenteriae 155-74] gi|332343437|gb|AEE56771.1| translation initiation factor protein [Escherichia coli UMNK88] Length = 113 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ Sbjct: 26 VKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIM+L+ K Sbjct: 86 QELAVVESFPTKIEGRQMIMVLAPK 110 >gi|300778182|ref|ZP_07088040.1| translation initiation factor IF3 [Chryseobacterium gleum ATCC 35910] gi|300503692|gb|EFK34832.1| translation initiation factor IF3 [Chryseobacterium gleum ATCC 35910] Length = 159 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 75/133 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A E LDLV I P + ++L+ +K Y +K E + KQ +KE++ P D Sbjct: 23 QIAAEQELDLVVISDKAEPFIARVLEYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 82 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 83 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIIFKDQGEILLLKLAQELEHVGKVDQLPK 142 Query: 122 FEGRQMIMILSSK 134 EG++MIM++S K Sbjct: 143 LEGKRMIMMMSPK 155 >gi|260889787|ref|ZP_05901050.1| translation initiation factor IF-3 [Leptotrichia hofstadii F0254] gi|260860393|gb|EEX74893.1| translation initiation factor IF-3 [Leptotrichia hofstadii F0254] Length = 163 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + TP VCKI+D K +Y K E +KKQK+ IKE++++P I Sbjct: 29 LALAAEKELDLVEISPNATPPVCKIMDYGKFKYEKTKKDKENKKKQKNVVIKEIRIKPHI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE +H + ++L F E + ++ + Sbjct: 89 DEHDKETKISQIEKFIAKEHKVKVSLRLTGRERLHAESAIKVLDEFASHFEETATVEKKY 148 Query: 121 KFEGRQMIMILSSK 134 E Q ++LS K Sbjct: 149 GKEQVQKFILLSPK 162 >gi|172040803|ref|YP_001800517.1| translation initiation factor IF-3 [Corynebacterium urealyticum DSM 7109] gi|171852107|emb|CAQ05083.1| translation initiation factor IF-3 [Corynebacterium urealyticum DSM 7109] Length = 115 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 61/107 (57%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EAR+ Q+ T +KE K RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKFKYEQAQKAREARRNQQQTVVKEQKFRPKIDDHDYETKKGNVVRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE +LG LL + E+ +++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPELGFRLLERLAADVEEVGQVESRPKQDGRNMTMVLG 107 >gi|302762997|ref|XP_002964920.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii] gi|302809619|ref|XP_002986502.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii] gi|300145685|gb|EFJ12359.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii] gi|300167153|gb|EFJ33758.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii] Length = 430 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 29/152 (19%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRK--------------------LRYTIQKNAV 40 Q A+ LDLV I + P V K++D K Y+I + V Sbjct: 127 FQRAERLELDLVLISADSDPPVAKLMDYSKYKYEQQKKKRDQQKKAAGITFFYSIGSSRV 186 Query: 41 EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGR 100 E IKE+KMR ID HD +V+LK FL+DG KVK+ + FRGRE +DLG Sbjct: 187 E---------IKELKMRYNIDTHDYEVRLKQAKNFLKDGDKVKVFMPFRGREAQFKDLGV 237 Query: 101 ELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 +LL +E GE+ ++ + EGR M M L+ Sbjct: 238 KLLRKFEEDIGEMGSLENKLADEGRTMYMTLA 269 >gi|291166785|gb|EFE28831.1| translation initiation factor IF-3 [Filifactor alocis ATCC 35896] Length = 193 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 81/131 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV+I + P VCKI+D K +Y K E++KKQK +KE+++RP I Sbjct: 57 LELATAQELDLVKISPNAVPPVCKIMDYGKYKYESAKREKESKKKQKVVVMKELRLRPAI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL+ K K FL +G K+K+SV+FRGRE+ H+D+G +L E E +P Sbjct: 117 EENDLKTKAKMGTKFLANGDKLKVSVRFRGRELGHKDIGFIVLDKFVELVQEQGTPVGKP 176 Query: 121 KFEGRQMIMIL 131 K EG +++++ Sbjct: 177 KMEGNSLVLMV 187 >gi|322379033|ref|ZP_08053436.1| translation initiation factor IF-3 [Helicobacter suis HS1] gi|322380799|ref|ZP_08054905.1| translation initiation factor IF-3 [Helicobacter suis HS5] gi|321146803|gb|EFX41597.1| translation initiation factor IF-3 [Helicobacter suis HS5] gi|321148525|gb|EFX43022.1| translation initiation factor IF-3 [Helicobacter suis HS1] Length = 171 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 70/131 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +DLV I + P VCK++D K Y +K EARKKQ+ IKE+K+ I Sbjct: 36 LRIAMSKGMDLVLISPTAKPPVCKVMDYGKFCYQSEKKQKEARKKQRQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ +G VK V RGRE G +L + E +I+ + EP Sbjct: 96 AQNDINYKVKHAREFIEEGKHVKFKVVLRGRESHDPKAGLAVLEKVAEMMKDIANAEKEP 155 Query: 121 KFEGRQMIMIL 131 K EGR ++ + Sbjct: 156 KAEGRFVMWLF 166 >gi|195952840|ref|YP_002121130.1| translation initiation factor IF-3 [Hydrogenobaculum sp. Y04AAS1] gi|195932452|gb|ACG57152.1| translation initiation factor IF-3 [Hydrogenobaculum sp. Y04AAS1] Length = 171 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 ++ A LDLVEI P VCKIL+ K +Y IQK EA+KKQK + I K++ ++ Sbjct: 34 LEAANRKGLDLVEIAPQANPPVCKILNYSKFKYEIQKKEKEAKKKQKESAINVKDINLKV 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 +ID HDL +K+K + FL DG KV++ ++FRGRE ++ +LG +L+ I ++ ++ Sbjct: 94 MIDNHDLAIKIKQMREFLEDGDKVRVRIRFRGRENIYPELGNKLVDKIINELADVGVLEK 153 Query: 119 EPKFEGRQMIMILSSK 134 P E + L K Sbjct: 154 PPLKENAFLTFTLLPK 169 >gi|88658160|ref|YP_506842.1| translation initiation factor IF-3 [Ehrlichia chaffeensis str. Arkansas] gi|123763786|sp|Q2GI91|IF3_EHRCR RecName: Full=Translation initiation factor IF-3 gi|88599617|gb|ABD45086.1| translation initiation factor IF-3 [Ehrlichia chaffeensis str. Arkansas] Length = 173 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 82/131 (62%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I + Sbjct: 43 AKAVNLDLVEIVHDDQYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNIGDN 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL + GF+ G KVKIS++F GREI+H ++G E++ + +I++ + PK E Sbjct: 103 DYNVKLNMLRGFIERGDKVKISLRFIGREILHPEVGMEIIERLIRDTADIAKPENLPKKE 162 Query: 124 GRQMIMILSSK 134 G + M+L++K Sbjct: 163 GNIINMVLTAK 173 >gi|227485254|ref|ZP_03915570.1| translation initiation factor IF3 [Anaerococcus lactolyticus ATCC 51172] gi|227236714|gb|EEI86729.1| translation initiation factor IF3 [Anaerococcus lactolyticus ATCC 51172] Length = 185 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 75/129 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA + NLDLV + + P V +I+D K +Y +K E +KKQK+ +KE + I+ Sbjct: 49 MADDRNLDLVLMSPNAKPPVTRIMDYGKFKYDQEKKEKENKKKQKNAQLKETRFSLNIED 108 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ +I+ +PK Sbjct: 109 NDLQTKANQTKKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFNGMLDGCGKIEKKPKM 168 Query: 123 EGRQMIMIL 131 EGR ++M L Sbjct: 169 EGRSLVMFL 177 >gi|448402|prf||1917188C initiation factor 3 Length = 111 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+ + FL DG KVKI+++FRGRE+ HQ +G ++L+ +K Sbjct: 25 VKEIKFRPSTDELDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDL 84 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ I+ P K EGRQMIM+L+ K Sbjct: 85 IELAIIESFPSKIEGRQMIMVLAPK 109 >gi|206890678|ref|YP_002249046.1| translation initiation factor IF-3, C-terminal domain [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742616|gb|ACI21673.1| translation initiation factor IF-3, C-terminal domain [Thermodesulfovibrio yellowstonii DSM 11347] Length = 108 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 5/108 (4%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y ++K +K + +KE+K+RP I HDLQ+K+K I FL DG K +I+ Sbjct: 1 MDYGKYKYQLEKKGSS----KKPSTVKEIKIRPQISDHDLQLKVKHIKRFLEDGDKARIT 56 Query: 86 VKFRGREIMHQDLGRELLSNIKERF-GEISRIDCEPKFEGRQMIMILS 132 + FRGREI+H ++G ++ IK G +I+ EP+ EG M MI++ Sbjct: 57 LFFRGREIVHSEMGMKVFDKIKALLVGFAHKIEQEPRLEGNSMSMIIA 104 >gi|300722779|ref|YP_003712070.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus nematophila ATCC 19061] gi|297629287|emb|CBJ89886.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus nematophila ATCC 19061] Length = 112 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ I+E E Sbjct: 28 EIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIDMLNRIREDLSE 87 Query: 113 ISRIDCEP-KFEGRQMIMILSSK 134 ++ ++ P K EGRQMIM+L+ K Sbjct: 88 LATVESFPTKVEGRQMIMVLAPK 110 >gi|187250760|ref|YP_001875242.1| translation initiation factor IF-3 [Elusimicrobium minutum Pei191] gi|254803488|sp|B2KB83|IF3_ELUMP RecName: Full=Translation initiation factor IF-3 gi|186970920|gb|ACC97905.1| Translation initiation factor IF-3 [Elusimicrobium minutum Pei191] Length = 177 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI + P VCKILD K Y K +A+KK T +KE++++ I Sbjct: 43 LYLAKQQELDLVEISPTAEPPVCKILDYSKYLYEQGKKLKDAKKKTAKTAMKELRIKSRI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+VK+K I+ FL+ V++ V F GRE H+DLG ++L ++ +R I+ ++ Sbjct: 103 ASHDLEVKIKHIEDFLKRKDMVRLVVVFHGRENQHRDLGEQMLHDVAKRLEPIANVEGGL 162 Query: 121 KFEGRQMIMILSSK 134 + G +M MI K Sbjct: 163 QVTGNRMSMIFVPK 176 >gi|311087023|gb|ADP67103.1| translation initiation factor IF-3 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 112 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 IKE+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K Sbjct: 26 IKEIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDL 85 Query: 111 GEISRIDCEP-KFEGRQMIMILSSK 134 E++ ++ P K EGRQMIMIL+ K Sbjct: 86 IELATVEYFPSKIEGRQMIMILAPK 110 >gi|47097525|ref|ZP_00235064.1| translation initiation factor IF-3 [Listeria monocytogenes str. 1/2a F6854] gi|47014108|gb|EAL05102.1| translation initiation factor IF-3 [Listeria monocytogenes str. 1/2a F6854] Length = 112 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 64/107 (59%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D R+ QK EARK QK +KEV++ P ID HD KL+ FL G KVK S Sbjct: 1 MDYGIFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 ++F+GR I H+++G+++L + ++ I+ PK +GR M ++L+ Sbjct: 61 IRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLA 107 >gi|290475546|ref|YP_003468434.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus bovienii SS-2004] gi|289174867|emb|CBJ81668.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus bovienii SS-2004] Length = 112 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I+E E Sbjct: 28 EIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIREDLSE 87 Query: 113 ISRIDCEP-KFEGRQMIMILSSK 134 ++ ++ P + EGRQMIM+L+ K Sbjct: 88 LAVVESFPSRIEGRQMIMVLAPK 110 >gi|327398463|ref|YP_004339332.1| translation initiation factor IF-3 [Hippea maritima DSM 10411] gi|327181092|gb|AEA33273.1| translation initiation factor IF-3 [Hippea maritima DSM 10411] Length = 144 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 78/129 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLV + + P VC+I+D K Y QK +++K QK+ +KE+K+RP I Sbjct: 10 LRRAENAGLDLVVVSPNSNPIVCRIMDYGKYNYEKQKKQQKSKKSQKTIKVKELKLRPRI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q KLK FL D KVK ++ RGRE+ ++L EL+ +K E+ I+ +P Sbjct: 70 ADNDYQTKLKMAKSFLEDKNKVKFNIFLRGREMDKRELVEELIERLKLDLVEVGNIEGKP 129 Query: 121 KFEGRQMIM 129 ++GR++ + Sbjct: 130 DYQGRRITV 138 >gi|58699921|ref|ZP_00374512.1| initiation factor IF3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533563|gb|EAL57971.1| initiation factor IF3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 127 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/117 (42%), Positives = 77/117 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVE 127 >gi|257465354|ref|ZP_05629725.1| translation initiation factor IF-3 [Actinobacillus minor 202] gi|257451014|gb|EEV25057.1| translation initiation factor IF-3 [Actinobacillus minor 202] Length = 112 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 1/82 (1%) Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 +K RP D D QVKL+++ FL DG K KI+V+FRGRE+ HQ++G ++L +K EI Sbjct: 29 IKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQEIGMDVLERVKNDLAEI 88 Query: 114 SRIDCEP-KFEGRQMIMILSSK 134 + ++ P K EGRQ++M+L+ K Sbjct: 89 AVVESAPGKLEGRQVVMVLAPK 110 >gi|332295138|ref|YP_004437061.1| Translation initiation factor IF-3 [Thermodesulfobium narugense DSM 14796] gi|332178241|gb|AEE13930.1| Translation initiation factor IF-3 [Thermodesulfobium narugense DSM 14796] Length = 187 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 64/104 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ DLV I +P V +I+D K R+ K RK Q+ T +KEV++RP I Sbjct: 39 LRLARAKGSDLVLIAPHGSPPVARIMDYGKFRFEQSKKEKSQRKHQRQTVVKEVRLRPAI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 +DL K KA F+ +G KVK+SV FRGRE++H + G +L++ Sbjct: 99 GGNDLLTKAKAAQDFIDEGNKVKLSVIFRGREMIHMNQGIDLVN 142 >gi|124009348|ref|ZP_01694026.1| translation initiation factor IF-3 [Microscilla marina ATCC 23134] gi|123985010|gb|EAY24961.1| translation initiation factor IF-3 [Microscilla marina ATCC 23134] Length = 193 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 65/124 (52%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI P VCK++D K RY +K E + K + +KE++ P D HD K Sbjct: 1 MDLVEISPKAAPPVCKVIDYSKFRYDQKKKQKELKAKAQKVVMKEIRFGPNTDEHDFNFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L FL G K+K V F GR I+ ++ G +LL + +++ PK EG++M Sbjct: 61 LNHAKNFLESGAKLKAYVHFVGRTIVFKERGEQLLLKFALELEDYGKVEQLPKLEGKRMS 120 Query: 129 MILS 132 + L+ Sbjct: 121 IFLA 124 >gi|227111544|ref|ZP_03825200.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327044|ref|ZP_03831068.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 113 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSK 134 ++FRGRE+ HQ +G E+L+ +++ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFPSKIEGRQMIMVLAPK 110 >gi|152993996|ref|YP_001359717.1| translation initiation factor IF-3 [Sulfurovum sp. NBC37-1] gi|151425857|dbj|BAF73360.1| translation initiation factor IF-3 [Sulfurovum sp. NBC37-1] Length = 183 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P V K++D K +Y ++K EARK QK +KEVK I Sbjct: 48 LKIAEDKGLDLVLVSPDAKPPVAKVMDYGKHKYQLEKKKKEARKNQKKIEVKEVKFSCKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK+ V RGRE+ + + G E+L+ + +I++++ Sbjct: 108 ADNDIAYKVKHAREFLEKGKHVKLRVFLRGREMANPEWGVEVLNRVWPMLEDIAQLESPA 167 Query: 121 KFEGRQMIMILS 132 K EGR + M ++ Sbjct: 168 KQEGRYINMYVT 179 >gi|85057942|ref|YP_456858.1| protein translation initiation factor 3 [Aster yellows witches'-broom phytoplasma AYWB] gi|84790047|gb|ABC65779.1| bacterial protein translation initiation factor 3 [Aster yellows witches'-broom phytoplasma AYWB] Length = 115 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 67/111 (60%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 V ++++ +K RY QK E +KK + + +KE+++ P ID +DL K+K FL+ G K Sbjct: 2 VARLMNYQKHRYNQQKKLRETKKKTQISVLKEIRLNPTIDKNDLNTKIKQAQKFLKQGDK 61 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 VK+S++FRGR I + LG + + + +S+I+ K +G Q+ +LS Sbjct: 62 VKVSMRFRGRMINNFQLGETVFKQVMQDLKNLSQIETPLKLQGNQLTAVLS 112 >gi|6729964|pdb|2IFE|A Chain A, Translation Initiation Factor If3 From Escherichia Coli Ribosome Binding Domain (Residues 84-180) Length = 100 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E Sbjct: 15 EIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQE 74 Query: 113 ISRIDCEP-KFEGRQMIMILSSK 134 ++ ++ P K EGRQMIM+L+ K Sbjct: 75 LAVVESFPTKIEGRQMIMVLAPK 97 >gi|30468064|ref|NP_848951.1| translation initiation factor 3 [Cyanidioschyzon merolae strain 10D] gi|39931520|sp|Q85G77|IF3C_CYAME RecName: Full=Translation initiation factor IF-3, chloroplastic gi|30409164|dbj|BAC76113.1| initiation factor 3 [Cyanidioschyzon merolae strain 10D] Length = 175 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 76/133 (57%), Gaps = 2/133 (1%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A + LDL+ I+ + P VCKI++ K ++ ++K A RK Q + +KE++M ++ Sbjct: 43 QLAAKKGLDLLLINPNADPPVCKIVNYGKYKFELEKKAKAKRKNQ--SQLKEIQMSYNME 100 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD QV+L FL+ G KVK+++ +GRE+ H +L + ++ + ++++ P Sbjct: 101 EHDYQVRLSQACKFLKAGDKVKVTLMLKGREMQHLELAQNKMAQFQADVSSLAQLAKPPS 160 Query: 122 FEGRQMIMILSSK 134 EGR + I K Sbjct: 161 QEGRNLSAIFVPK 173 >gi|257126074|ref|YP_003164188.1| translation initiation factor IF-3 [Leptotrichia buccalis C-1013-b] gi|257050013|gb|ACV39197.1| translation initiation factor IF-3 [Leptotrichia buccalis C-1013-b] Length = 177 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + TP VCKI+D K +Y K E +KKQK+ +KE++++P I Sbjct: 43 LALATEKELDLVEISPNATPPVCKIMDYGKFKYEKTKKDKENKKKQKNVVVKEIRIKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE +H + ++L F EI+ ++ + Sbjct: 103 DEHDKETKISQIEKFIAKEHKVKVSLRLTGRERLHAESAIKVLDEFASHFEEIATVEKKY 162 Query: 121 KFEGRQMIMILSSK 134 E Q ++LS K Sbjct: 163 GREQVQKFILLSPK 176 >gi|319440340|ref|ZP_07989496.1| translation initiation factor IF-3 [Corynebacterium variabile DSM 44702] Length = 118 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 62/111 (55%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 +CKI+D K +Y + A EARK Q+ T +KE K RP I +D + K + FL G K Sbjct: 1 MCKIMDYGKFKYEQDQKAREARKNQQQTVVKEQKFRPKISDNDYETKKGNVVRFLEKGSK 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 VK+++ FRGRE +LG LL + + E ++ K +GR M M+L Sbjct: 61 VKVTIMFRGREQSRPELGFRLLERLADDVQEYGVVETRAKQDGRNMTMVLG 111 >gi|12831413|gb|AAK02071.1| initiation factor 3 [Vibrio metschnikovii] Length = 109 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 +K RP D+ D QVKL+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE +I Sbjct: 26 IKFRPGTDIGDYQVKLRNLTSFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTADI 85 Query: 114 SRIDCEP-KFEGRQMIMILSSK 134 + ++ P + E RQMIM+L+ K Sbjct: 86 AVVESFPSRIEARQMIMMLAPK 107 >gi|32477372|ref|NP_870366.1| translation initiation factor IF-3 [Rhodopirellula baltica SH 1] gi|39931221|sp|Q7UJ17|IF3_RHOBA RecName: Full=Translation initiation factor IF-3 gi|32447923|emb|CAD77443.1| translation initiation factor IF-3 [Rhodopirellula baltica SH 1] gi|327537327|gb|EGF24060.1| translation initiation factor IF-3 [Rhodopirellula baltica WH47] Length = 176 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 7/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRP 58 ++ A++A LDLVE+ P VC+I+D Y K +K S T KE+++RP Sbjct: 46 LERARDAGLDLVEVAPGERPPVCRIMD-----YGKFKYDKNKKKNSGSSHTKTKEIRLRP 100 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 D++ K++ + FL KV++SV FRGRE+ H + GR+++ + E E+ +++ Sbjct: 101 KTGDEDIRTKVRQAEKFLEHKDKVQVSVLFRGREMAHIEEGRKVMEQVIEILSEVGKVET 160 Query: 119 EPKFEGRQMIMILSSK 134 +P+ GR+MI +++ K Sbjct: 161 KPQQHGRRMICMIAPK 176 >gi|163752536|ref|ZP_02159722.1| translation initiation factor IF-3 [Shewanella benthica KT99] gi|161327591|gb|EDP98789.1| translation initiation factor IF-3 [Shewanella benthica KT99] Length = 76 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 54/73 (73%) Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++D QVKL+ + FL DG K K++++FRGRE+ HQ+LG +LL+ IK+ EI+ ++ PK Sbjct: 2 MNDYQVKLRNLIRFLTDGDKAKVTLRFRGREMAHQNLGMKLLNRIKDDLAEIAVVESFPK 61 Query: 122 FEGRQMIMILSSK 134 EGRQ +M+L+ K Sbjct: 62 MEGRQAVMVLAPK 74 >gi|240949010|ref|ZP_04753364.1| translation initiation factor IF-3 [Actinobacillus minor NM305] gi|240296597|gb|EER47215.1| translation initiation factor IF-3 [Actinobacillus minor NM305] Length = 112 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 57/82 (69%), Gaps = 1/82 (1%) Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 +K RP D D QVKL+++ FL DG K KI+V+FRGRE+ HQ++G ++L +K +I Sbjct: 29 IKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQEIGMDVLERVKNDLADI 88 Query: 114 SRIDCEP-KFEGRQMIMILSSK 134 + ++ P K EGRQ++M+L+ K Sbjct: 89 AVVESAPGKLEGRQVVMVLAPK 110 >gi|157833956|pdb|1TIG|A Chain A, Translation Initiation Factor 3 C-Terminal Domain Length = 94 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 57/90 (63%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 KQK +KEV++ P I+ HD KL+ FL G KVK +++F+GR I H+++G+ +L Sbjct: 1 KQKVINVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLD 60 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMILSSK 134 + E +I+ ++ PK +GR M ++L+ K Sbjct: 61 RLSEACADIAVVETAPKMDGRNMFLVLAPK 90 >gi|283779316|ref|YP_003370071.1| translation initiation factor IF-3 [Pirellula staleyi DSM 6068] gi|283437769|gb|ADB16211.1| translation initiation factor IF-3 [Pirellula staleyi DSM 6068] Length = 200 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 3/131 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E++LDLVE+ + P VC+I+D K +Y +K A + + K+ KE+++RP H Sbjct: 73 ARESDLDLVEVAPNERPPVCRIMDFGKYKYEKKKKAQQPTHQVKT---KEIRLRPKTGDH 129 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D++ K+K GFL+ KV++SV FRGRE+ H + GR+++ + E +++ P+ + Sbjct: 130 DIEFKVKQAVGFLQHKDKVQVSVIFRGRELAHIEEGRKVMDKVVSELLEFGKLEFPPQQQ 189 Query: 124 GRQMIMILSSK 134 ++MI + K Sbjct: 190 AKRMICTIMPK 200 >gi|285028549|gb|ADC34596.1| translation initation factor IF-3-like protein [uncultured prokaryote] Length = 82 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP ID HD + Sbjct: 1 DLDLVEVAPEARPPVCKIMDYGKFRYEAAQKARESRKHQQNTVIKEQKLRPKIDDHDYET 60 Query: 68 KLKAIDGFLRDGCKVKISVKFR 89 K + FL G KVK+++ FR Sbjct: 61 KKGHVVRFLDAGAKVKVTIMFR 82 >gi|227494664|ref|ZP_03924980.1| possible translation initiation factor IF3 [Actinomyces coleocanis DSM 15436] gi|226831846|gb|EEH64229.1| possible translation initiation factor IF3 [Actinomyces coleocanis DSM 15436] Length = 152 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 64/107 (59%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A +AR+ Q +T +KE++ R ID HD + K ++ FL G KVK+ Sbjct: 1 MDYGKFKYEAAQKARDARRNQANTVLKEIRFRLKIDDHDYETKKGHVERFLNGGDKVKVM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE ++G LL + E E++ ++ P+ +GR M+M+L+ Sbjct: 61 IMFRGREQSRPEMGIRLLQRLAEDVSELATVESAPRQDGRNMVMVLA 107 >gi|161833707|ref|YP_001597903.1| translation initiation factor 3 [Candidatus Sulcia muelleri GWSS] gi|152206197|gb|ABS30507.1| translation initiation factor 3 [Candidatus Sulcia muelleri GWSS] Length = 182 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 82/137 (59%), Gaps = 8/137 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI+S P +C+IL+ +K + ++ + + KQ+ KE+++ P I Sbjct: 48 LAIAYNIGLDLVEINSKTDPPICRILEYKK--FLYEQKKKKKKYKQEKIITKELRLSPQI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 HD K+K + FL+ KVK ++ F+GR I+H+D G+ LL +N E FG+I ++ Sbjct: 106 CEHDTLFKIKHAEKFLKSKEKVKFTIFFKGRSIIHKDKGKILLLKCANYLENFGKIEKM- 164 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++M +I++ K Sbjct: 165 --PIMEGKKMFIIITPK 179 >gi|15224088|ref|NP_179984.1| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|3738333|gb|AAC63674.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|18176092|gb|AAL59982.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|20465301|gb|AAM20054.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|21593709|gb|AAM65676.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|330252430|gb|AEC07524.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 312 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV + P V K++D K RY QK + +KK +KE+KM I Sbjct: 119 VRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDLKELKMGYNI 178 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L+A FL+DG KVK+ V +GRE +++ ELL + GE++ + + Sbjct: 179 DQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESK- 237 Query: 121 KFEGRQMIMIL 131 F R M +IL Sbjct: 238 NFRDRNMFIIL 248 >gi|149374488|ref|ZP_01892262.1| Translation initiation factor 3 (IF-3) [Marinobacter algicola DG893] gi|149361191|gb|EDM49641.1| Translation initiation factor 3 (IF-3) [Marinobacter algicola DG893] Length = 112 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 61/86 (70%) Query: 49 TGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKE 108 T +KE+K RP + D QVKL+ + FL +G + KI+++FRGRE+ HQ++G +L++ I+ Sbjct: 24 TQVKELKFRPGTEEGDYQVKLRNLVRFLENGDRGKITIRFRGREMAHQEIGMKLMNRIEV 83 Query: 109 RFGEISRIDCEPKFEGRQMIMILSSK 134 E+++++ PK EGRQM M+++ + Sbjct: 84 DIEELAQVEQRPKMEGRQMTMVVAPR 109 >gi|78776268|ref|YP_392583.1| translation initiation factor IF-3 [Sulfurimonas denitrificans DSM 1251] gi|123754759|sp|Q30UI3|IF3_SULDN RecName: Full=Translation initiation factor IF-3 gi|78496808|gb|ABB43348.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas denitrificans DSM 1251] Length = 172 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 69/131 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E LDLV I P V KI+D K RY ++ E +K Q +KE+K+ I Sbjct: 38 MERANELGLDLVLIAPDAKPPVAKIMDYGKYRYQEERKLKEQKKNQVKIDVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G VK V +GRE+ + + +++L + ++ +D EP Sbjct: 98 AENDINYKVKHAREFLAEGKHVKFRVFLKGREMANPESAKDVLLRVWAMIEDVGVMDKEP 157 Query: 121 KFEGRQMIMIL 131 KFEGR M + Sbjct: 158 KFEGRYYNMYV 168 >gi|189485294|ref|YP_001956235.1| translation initiation factor IF-3 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254803500|sp|B1GZU2|IF3_UNCTG RecName: Full=Translation initiation factor IF-3 gi|170287253|dbj|BAG13774.1| translation initiation factor IF-3 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 182 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/111 (45%), Positives = 73/111 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQ +LDLVEI P VC+I++ K +Y ++K EARKKQK IKEV++RP I H Sbjct: 48 AQAKDLDLVEISPQANPPVCRIINFSKFKYEMEKKEKEARKKQKIFHIKEVRIRPRISDH 107 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 DL+VK+K F+ G KV+++ F GRE+ H+DLG +++ IKE +I+ Sbjct: 108 DLEVKIKHAREFIDGGDKVQLTALFSGREMQHKDLGIKIMERIKESLADIA 158 >gi|68535909|ref|YP_250614.1| translation initiation factor IF-3 [Corynebacterium jeikeium K411] gi|260577995|ref|ZP_05845919.1| translation initiation factor IF-3 [Corynebacterium jeikeium ATCC 43734] gi|68263508|emb|CAI36996.1| translation initiation factor IF-3 [Corynebacterium jeikeium K411] gi|258603885|gb|EEW17138.1| translation initiation factor IF-3 [Corynebacterium jeikeium ATCC 43734] Length = 114 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 58/107 (54%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EARK Q+ T +KE K RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKGNVIRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE +LG LL + E ++ K +GR M M+L Sbjct: 61 IMFRGREQSRPELGFRLLERLANDVEEYGVVETRAKQDGRNMTMVLG 107 >gi|269119783|ref|YP_003307960.1| translation initiation factor IF-3 [Sebaldella termitidis ATCC 33386] gi|268613661|gb|ACZ08029.1| translation initiation factor IF-3 [Sebaldella termitidis ATCC 33386] Length = 177 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA +DLVEI + P VCKI+D K +Y K E +KKQK KE++++P I Sbjct: 43 LEKAQEAGMDLVEISPNANPPVCKIMDYGKFKYEKTKKDKENKKKQKQVVTKEMRVKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ I+ FL K+KIS++ GR+ ++ D G ++L + + F + + I+ + Sbjct: 103 DTHDRDTKIAQIEKFLEKEYKIKISLRLAGRQKLYADQGIKVLDELADHFKDKAIIEKKY 162 Query: 121 KFEGRQMIMILSSK 134 + Q ++LS K Sbjct: 163 GKDQIQKFVLLSPK 176 >gi|226941672|ref|YP_002796746.1| InfC [Laribacter hongkongensis HLHK9] gi|226716599|gb|ACO75737.1| InfC [Laribacter hongkongensis HLHK9] Length = 111 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 67/109 (61%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K E ++KQK +KE+K RP D D VK++ + FL DG K K++ Sbjct: 1 MDYGKFKYQESKRKHEQKQKQKQIQVKEIKFRPGTDDGDYNVKIRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQD+G LL ++ E+ ++ PK EGRQM+M++ K Sbjct: 61 LRFRGREMAHQDIGLALLKRVEADLVEVGTVEQFPKLEGRQMVMMIGPK 109 >gi|225445818|ref|XP_002276984.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743667|emb|CBI36550.3| unnamed protein product [Vitis vinifera] Length = 272 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +QMA++A LDLV + P V +I+D K RY +QK +KK + +KE+KM Sbjct: 112 IQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGY 171 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+LKA FL+DG KVKI V +GRE +++ EL+ + GE++ + Sbjct: 172 NIDSHDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEES 231 Query: 119 EPKFEGRQMIMIL 131 + F R + ++L Sbjct: 232 K-NFSVRNIFIVL 243 >gi|255024280|ref|ZP_05296266.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-208] Length = 99 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 58/92 (63%) Query: 41 EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGR 100 EARK QK +KEV++ P ID HD KL+ FL G KVK S++F+GR I H+++G+ Sbjct: 3 EARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQ 62 Query: 101 ELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 ++L + ++ I+ PK +GR M ++L+ Sbjct: 63 KVLDRFAKACEDLCTIEQRPKMDGRSMFLVLA 94 >gi|293977817|ref|YP_003543247.1| bacterial translation initiation factor 3 [Candidatus Sulcia muelleri DMIN] gi|292667748|gb|ADE35383.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Sulcia muelleri DMIN] Length = 182 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 82/137 (59%), Gaps = 8/137 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI++ P +C+IL+ +K + ++ + + KQ+ KE+++ P I Sbjct: 48 LAIAYNIGLDLVEINTKTDPPICRILEYKK--FLYEQKKKKKKYKQEKIITKELRLSPQI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 HD K+K + FL+ KVK ++ F+GR I+H+D G+ LL +N E FG+I ++ Sbjct: 106 CEHDTLFKIKHAEKFLKYKEKVKFTIFFKGRSIIHKDKGKILLLKCANYLENFGKIEKM- 164 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++M +I++ K Sbjct: 165 --PIMEGKKMFIIITPK 179 >gi|297821667|ref|XP_002878716.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp. lyrata] gi|297324555|gb|EFH54975.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp. lyrata] Length = 292 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV + P V K++D K RY QK + +KK +KE+KM I Sbjct: 121 VRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDLKELKMGYNI 180 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L+A FL+DG KVK+ V +GRE +++ ELL + GE++ + + Sbjct: 181 DQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESK- 239 Query: 121 KFEGRQMIMIL 131 F R + +IL Sbjct: 240 NFRDRNLFIIL 250 >gi|269114901|ref|YP_003302664.1| translation initiation factor IF-3 [Mycoplasma hominis] gi|268322526|emb|CAX37261.1| Translation initiation factor if-3 [Mycoplasma hominis ATCC 23114] Length = 229 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 67/119 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E N+DLV I + +ILD K +Y +K E ++KQ T +E+++ P+I Sbjct: 82 LEKASEYNMDLVLIAIENNKPIVRILDYGKFKYDKKKRQKEVKEKQAVTVNREIRLTPLI 141 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 HDL+ K F+ DG +VK+SVKFRGRE +LG E+L ++++I E Sbjct: 142 GDHDLKTKANKTREFILDGNRVKVSVKFRGRERARIELGEEILKKFFALIEDVAKISKE 200 >gi|296314678|ref|ZP_06864619.1| translation initiation factor IF-3 protein [Neisseria polysaccharea ATCC 43768] gi|296838507|gb|EFH22445.1| translation initiation factor IF-3 protein [Neisseria polysaccharea ATCC 43768] Length = 68 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 50/66 (75%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 ++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK EGRQM+ Sbjct: 1 MRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMV 60 Query: 129 MILSSK 134 M+++ K Sbjct: 61 MMIAPK 66 >gi|255585038|ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis] gi|223526947|gb|EEF29148.1| translation initiation factor if-3, putative [Ricinus communis] Length = 274 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 3/134 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +QMA+ A LDLV + P V +I+D K RY +QK +KK +T +KE+KM Sbjct: 114 IQMAENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGY 173 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL+DG KVK+ V +GRE +++ EL+ + GE++ + Sbjct: 174 NIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEET 233 Query: 119 EPKFEGRQMIMILS 132 + F R + + L+ Sbjct: 234 K-NFRDRNIFITLA 246 >gi|295698322|ref|YP_003602977.1| translation initiation factor IF-3 [Candidatus Riesia pediculicola USDA] gi|291157453|gb|ADD79898.1| translation initiation factor IF-3 [Candidatus Riesia pediculicola USDA] Length = 183 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLVEI + P VCKI++ K Y K + +KKQK +KE+K RP + Sbjct: 47 AETFGLDLVEIAPNTVPPVCKIMNYGKFIYRKNKLIKKQKKKQKLFQVKEIKFRPNTNEG 106 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC-EPKF 122 D Q KLK + FL+ G K KI+V+FRGRE+ H+ +G +L+ I++ S + K Sbjct: 107 DYQTKLKKLIKFLKHGDKTKITVRFRGREVTHKKIGLNMLNRIQKDLESYSNTEMFSSKI 166 Query: 123 EGRQMIMILSSKC 135 E RQ++MILS K Sbjct: 167 ENRQIVMILSPKS 179 >gi|189025171|ref|YP_001935939.1| Initiation factor 3 [Brucella abortus S19] gi|306837674|ref|ZP_07470543.1| translation initiation factor IF-3 [Brucella sp. NF 2653] gi|306843536|ref|ZP_07476137.1| translation initiation factor IF-3 [Brucella sp. BO1] gi|189020743|gb|ACD73465.1| Initiation factor 3 [Brucella abortus S19] gi|306276227|gb|EFM57927.1| translation initiation factor IF-3 [Brucella sp. BO1] gi|306407232|gb|EFM63442.1| translation initiation factor IF-3 [Brucella sp. NF 2653] Length = 66 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 50/66 (75%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 +KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EPK EGRQM+ Sbjct: 1 MKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMM 60 Query: 129 MILSSK 134 M+L+ + Sbjct: 61 MVLAPR 66 >gi|110004466|emb|CAK98803.1| putative translation initiation factor if-3 protein [Spiroplasma citri] Length = 176 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDL+ + ++ P V K++D K +Y +K E +K Q T KE+++R I Sbjct: 42 IRFAEEKGLDLLLVSAASNPPVAKLVDYGKYKYEQKKKEKENKKNQHITENKEMRLRTGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K K + FL DG +VKIS+KFRGRE+ + G+E L ++++I+ EP Sbjct: 102 GEHDLEFKAKKVREFLTDGNRVKISLKFRGREVARPEYGKETLDKFFSYIEDLAKIEKEP 161 Query: 121 KFEGRQMIMILSSK 134 + G + M + K Sbjct: 162 QLNGLFLDMYVVPK 175 >gi|159484590|ref|XP_001700337.1| predicted protein [Chlamydomonas reinhardtii] gi|158272378|gb|EDO98179.1| predicted protein [Chlamydomonas reinhardtii] Length = 101 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 60/100 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EA DL+ I+ +P V +I+ K +Y ++K A E + K KEV++RP D Sbjct: 2 LADEAKEDLLLINPDASPPVARIIAWSKYKYELEKGAKERKAKSTQQETKEVRLRPSTDS 61 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGREL 102 DL VK+K+ FL G +VK+ +KF GRE+ ++ G+E+ Sbjct: 62 GDLAVKIKSCQKFLAKGDRVKLVMKFEGRELQFREQGKEV 101 >gi|152989861|ref|YP_001355583.1| translation initiation factor IF-3 [Nitratiruptor sp. SB155-2] gi|166198959|sp|A6Q167|IF3_NITSB RecName: Full=Translation initiation factor IF-3 gi|151421722|dbj|BAF69226.1| translation initiation factor IF-3 [Nitratiruptor sp. SB155-2] Length = 177 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I + P VCKI+D K +Y +K EA+KKQ +KE+K+ I Sbjct: 38 LKIAEQKGLDLVLIAPNANPPVCKIMDYGKFKYQQEKKLKEAKKKQTKIEVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + G E+L I +I ++ +P Sbjct: 98 AQNDIDYKVKHAREFLEKGKHVKFRVFLRGREMAHPEAGVEVLEKIIPLIEDIGVVEKKP 157 Query: 121 KFEGRQMIMILSSK 134 EGR + M++ K Sbjct: 158 HLEGRYVNMLVIPK 171 >gi|292488130|ref|YP_003531007.1| translation initiation factor IF-3 [Erwinia amylovora CFBP1430] gi|291553554|emb|CBA20599.1| Translation initiation factor IF-3 [Erwinia amylovora CFBP1430] gi|312172262|emb|CBX80519.1| Translation initiation factor IF-3 [Erwinia amylovora ATCC BAA-2158] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 4/88 (4%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KE+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ Sbjct: 26 VKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDL 85 Query: 111 GE---ISRIDCEP-KFEGRQMIMILSSK 134 E ++ ++ P K EGRQMIM+L+ K Sbjct: 86 CEDIDLAVVESFPTKIEGRQMIMVLAPK 113 >gi|223039228|ref|ZP_03609518.1| translation initiation factor IF-3 [Campylobacter rectus RM3267] gi|255323682|ref|ZP_05364812.1| translation initiation factor IF-3 [Campylobacter showae RM3277] gi|222879589|gb|EEF14680.1| translation initiation factor IF-3 [Campylobacter rectus RM3267] gi|255299396|gb|EET78683.1| translation initiation factor IF-3 [Campylobacter showae RM3277] Length = 171 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P VCKI+D K RY +K EA+KKQK+ +KE+K+ I Sbjct: 37 LKIAEKMGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEVKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G VK V +GRE+ + + G +L + E ++S D EP Sbjct: 97 AQNDINYKVKHALEFLEEGKHVKFRVFLKGREMSNPEAGVAMLQKVWEMVKDVSDRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 157 LLEGRYVNMLVTPK 170 >gi|73667548|ref|YP_303564.1| translation initiation factor 3 [Ehrlichia canis str. Jake] gi|72394689|gb|AAZ68966.1| bacterial translation initiation factor 3 (bIF-3) [Ehrlichia canis str. Jake] Length = 159 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 81/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I + Sbjct: 29 AKAVNLDLVEIVHDDEYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNIGDN 88 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VKL + F+ G KVKIS++F GREI+H ++G E++ + + +I++ + K E Sbjct: 89 DYNVKLNMLRSFIERGDKVKISLRFIGREILHPEVGMEIIERLIKDTSDIAKPENLLKKE 148 Query: 124 GRQMIMILSSK 134 G + M+L++K Sbjct: 149 GNLINMVLTAK 159 >gi|257459980|ref|ZP_05625084.1| translation initiation factor IF-3 [Campylobacter gracilis RM3268] gi|257442421|gb|EEV17560.1| translation initiation factor IF-3 [Campylobacter gracilis RM3268] Length = 173 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ +DLV I P VCK+++ K RY +K EA+KKQK +KE+K+ I Sbjct: 37 LQIAEREGVDLVLIAPDAKPPVCKVMNYSKFRYQQEKKLKEAKKKQKIIEVKEIKLSAKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI-KERFGEISRIDCE 119 +D+ K+K FL G VK+ V +GRE+ ++G LL+ I E F E++ D Sbjct: 97 AQNDINYKVKHAKEFLSSGKHVKLRVFLKGREMSSPEIGVNLLNKIWDEFFAEVADRDKA 156 Query: 120 PKFEGRQMIMILSSK 134 P EGR + M+++ K Sbjct: 157 PALEGRYVNMLITPK 171 >gi|302847472|ref|XP_002955270.1| hypothetical protein VOLCADRAFT_106738 [Volvox carteri f. nagariensis] gi|300259342|gb|EFJ43570.1| hypothetical protein VOLCADRAFT_106738 [Volvox carteri f. nagariensis] Length = 309 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EA DL+ I+ +P + +I+ K +Y ++KNA E + K +T KEV++RP D Sbjct: 177 LADEAKEDLLLINPDASPPLVRIIGWSKYKYELEKNAKEKKAKSSATETKEVRLRPSTDS 236 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 DL VK+K FL G +VK+ +KF GRE+ ++ G+E+L N +++++ F Sbjct: 237 GDLAVKMKNCMKFLSKGDRVKLVMKFEGRELQFKEQGKEVLLNFISELASVAKVEGPLNF 296 Query: 123 E-GRQMIMILSSK 134 + G IM+ +K Sbjct: 297 KTGTYTIMLSPNK 309 >gi|46204953|ref|ZP_00049248.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 181 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 59/107 (55%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y A EAR+ Q +T +KE++ R ID HD K ++ FL G KVK+ Sbjct: 1 MDFGKFKYESDMKAREARRNQANTVLKEIRFRLKIDPHDYGTKKGHVERFLAAGDKVKVM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 + FRGRE ++G LL + + E+ ++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPEMGVRLLQRLADDVAELGFVESMPKQDGRNMTMVLG 107 >gi|301059173|ref|ZP_07200113.1| translation initiation factor IF-3, C-terminal domain protein [delta proteobacterium NaphS2] gi|300446721|gb|EFK10546.1| translation initiation factor IF-3, C-terminal domain protein [delta proteobacterium NaphS2] Length = 107 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Query: 30 KLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 K RY K EARKK + +KE+K+RP HDL K+K + FL +VK+SV FR Sbjct: 2 KFRYEASKKVQEARKKTRGGQMKEIKLRPNTQDHDLGFKIKNLKSFLDKKHRVKVSVFFR 61 Query: 90 GREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR-QMIMILSSK 134 GRE+ G +LL + E ++ +D P E R +M M++ K Sbjct: 62 GREMAFMQAGEDLLQRVAEDVSDVGTVDQPPSREARNRMTMVIVPK 107 >gi|255638877|gb|ACU19741.1| unknown [Glycine max] Length = 275 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +QMA++ LDLV + P V +I+D K RY QK +KK + +KE+KM Sbjct: 113 IQMAEDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAANRMDLKELKMGY 172 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+LKA FL+DG KVK+ V +GRE +++ L++ + GE+ I+ Sbjct: 173 NIDEHDYSVRLKAAQKFLKDGNKVKVIVNLKGRENEFRNMAIALITRFQNDVGELG-IEE 231 Query: 119 EPKFEGRQMIMIL 131 F R + +IL Sbjct: 232 TKNFRDRNIFIIL 244 >gi|270308067|ref|YP_003330125.1| translation initiation factor 3 (IF-3) [Dehalococcoides sp. VS] gi|270153959|gb|ACZ61797.1| translation initiation factor 3 (IF-3) [Dehalococcoides sp. VS] Length = 126 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 63/111 (56%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K R+ K EA++ QK + +KE+++RP I HD K ++ L G KVK++ Sbjct: 1 MDYGKYRFEQTKKDREAKRTQKISLLKEIRVRPKIGEHDFDAKARSARKQLESGDKVKLT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKCV 136 V FRGREI H +LG +LL + + +I+ I+ +P G +M + L K Sbjct: 61 VMFRGREITHAELGLKLLKKMADTLTDIATIEGQPSLLGSRMHLTLLPKAA 111 >gi|238749481|ref|ZP_04610986.1| Translation initiation factor IF-3 [Yersinia rohdei ATCC 43380] gi|238757781|ref|ZP_04618964.1| Translation initiation factor IF-3 [Yersinia aldovae ATCC 35236] gi|238765297|ref|ZP_04626224.1| Translation initiation factor IF-3 [Yersinia kristensenii ATCC 33638] gi|238783383|ref|ZP_04627406.1| Translation initiation factor IF-3 [Yersinia bercovieri ATCC 43970] gi|238787090|ref|ZP_04630890.1| Translation initiation factor IF-3 [Yersinia frederiksenii ATCC 33641] gi|238791700|ref|ZP_04635337.1| Translation initiation factor IF-3 [Yersinia intermedia ATCC 29909] gi|238797379|ref|ZP_04640879.1| Translation initiation factor IF-3 [Yersinia mollaretii ATCC 43969] gi|238696470|gb|EEP89260.1| Translation initiation factor IF-3 [Yersinia kristensenii ATCC 33638] gi|238704024|gb|EEP96558.1| Translation initiation factor IF-3 [Yersinia aldovae ATCC 35236] gi|238712136|gb|EEQ04349.1| Translation initiation factor IF-3 [Yersinia rohdei ATCC 43380] gi|238715628|gb|EEQ07617.1| Translation initiation factor IF-3 [Yersinia bercovieri ATCC 43970] gi|238718810|gb|EEQ10626.1| Translation initiation factor IF-3 [Yersinia mollaretii ATCC 43969] gi|238724878|gb|EEQ16518.1| Translation initiation factor IF-3 [Yersinia frederiksenii ATCC 33641] gi|238728804|gb|EEQ20321.1| Translation initiation factor IF-3 [Yersinia intermedia ATCC 29909] gi|318605897|emb|CBY27395.1| unnamed protein product [Yersinia enterocolitica subsp. palearctica Y11] gi|330861020|emb|CBX71292.1| translation initiation factor IF-3 [Yersinia enterocolitica W22703] Length = 116 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 4/86 (4%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E Sbjct: 28 EIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKKDLTE 87 Query: 113 ISRIDCEPKF----EGRQMIMILSSK 134 S + F EGRQMIM+L+ K Sbjct: 88 DSDLAVVESFPTRIEGRQMIMVLAPK 113 >gi|218509052|ref|ZP_03506930.1| translation initiation factor IF-3 [Rhizobium etli Brasil 5] Length = 122 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/57 (63%), Positives = 43/57 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMR Sbjct: 66 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMR 122 >gi|262037768|ref|ZP_06011210.1| translation initiation factor IF-3 [Leptotrichia goodfellowii F0264] gi|261748240|gb|EEY35637.1| translation initiation factor IF-3 [Leptotrichia goodfellowii F0264] Length = 177 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E L+LVEI + TP VCKI+D K +Y K E +KKQK+ IKE++++P I Sbjct: 43 IALANEKGLELVEISPNATPPVCKIMDYGKFKYEKTKKEKENKKKQKNVVIKELRIKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE MH + ++L F E + ++ + Sbjct: 103 DEHDKETKISQIEKFIAKEYKVKVSLRLSGREKMHAESAIKVLDEFASHFEETATVEKKY 162 Query: 121 KFEGRQMIMILSSK 134 E Q ++LS K Sbjct: 163 GKEQLQKFIMLSPK 176 >gi|315123807|ref|YP_004065811.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017529|gb|ADT65622.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 172 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 73/134 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + V P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADVKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|28211883|ref|NP_782827.1| translation initiation factor IF-3 [Clostridium tetani E88] gi|39931275|sp|Q891T1|IF3_CLOTE RecName: Full=Translation initiation factor IF-3 gi|28204326|gb|AAO36764.1| bacterial protein translation initiation factor 3 [Clostridium tetani E88] Length = 173 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLV I + P VCKI++ K Y K EA+KKQK +KE+++ I Sbjct: 38 LKRAEEKELDLVMIAPTGKPPVCKIMNYGKFIYEQTKKDKEAKKKQKVINVKEIRLSATI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCE 119 + HD+ +K FL+ KVK++V+FRGRE+ H + +G ++L + ++ ++ Sbjct: 98 EEHDIGIKANNARKFLKAEDKVKVTVRFRGREMEHSNVVGNKILKTFLSKVEDVCVVEKP 157 Query: 120 PKFEGRQMIMILSSK 134 + EG+ M M+L+ + Sbjct: 158 ARLEGKNMTMVLAPR 172 >gi|163756232|ref|ZP_02163347.1| translation initiation factor IF-3 [Kordia algicida OT-1] gi|161323844|gb|EDP95178.1| translation initiation factor IF-3 [Kordia algicida OT-1] Length = 111 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 61/109 (55%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D +K Y +K + K +KE++ P D HD + K K FL+DG K+K Sbjct: 1 MDYKKFLYEQKKREKSLKAKASKVTVKEIRFGPQTDEHDYEFKKKHAIKFLKDGAKLKAY 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 V F+GR I+++D G+ LL + + E +++ PK EG++MIM ++ K Sbjct: 61 VFFKGRSIIYKDQGQILLLKLAQELEEYGKVEQMPKLEGKRMIMFIAPK 109 >gi|319957837|ref|YP_004169100.1| bacterial translation initiation factor 3 (bif-3) [Nitratifractor salsuginis DSM 16511] gi|319420241|gb|ADV47351.1| bacterial translation initiation factor 3 (bIF-3) [Nitratifractor salsuginis DSM 16511] Length = 183 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I TP V KI+D K +Y ++K EA+K QK +KEVK I Sbjct: 47 LKIAEEKGLDLVLISPDATPPVAKIMDYGKHKYQVEKKKKEAKKNQKKIEVKEVKFSCKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK+ V RGRE+ + +LG E+L + +I ++ P Sbjct: 107 ADNDIAYKVKHAREFLEKGKHVKLRVFLRGREMANPELGVEVLKRVWPMIEDIGVMEKAP 166 Query: 121 KFEGRQMIMILSSK 134 EGR + M ++ K Sbjct: 167 HQEGRYITMYVTPK 180 >gi|154175144|ref|YP_001407385.1| translation initiation factor IF-3 [Campylobacter curvus 525.92] gi|166198950|sp|A7GVZ3|IF3_CAMC5 RecName: Full=Translation initiation factor IF-3 gi|153793186|gb|EAT99714.2| translation initiation factor IF-3 [Campylobacter curvus 525.92] Length = 172 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAEKQGLDLVLVAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIEIKEIKLSIKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E +++ D EP Sbjct: 97 AQNDINYKVKHAVEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWELVKDVADRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 157 LVEGRYVNMLVTPK 170 >gi|225166409|ref|ZP_03728072.1| translation initiation factor IF-3 [Opitutaceae bacterium TAV2] gi|224799347|gb|EEG17911.1| translation initiation factor IF-3 [Opitutaceae bacterium TAV2] Length = 165 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 2/103 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ NLDLVE+ ++ P VC+I+D K Y QK K ++ IKE++ I Sbjct: 57 LALAQQFNLDLVEMAATADPPVCRIMDFGKYVYEEQKKTSHV--KATASKIKEIEFTARI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 + D K+K + FL G KVK+ +KFRGRE+ +LG +++ Sbjct: 115 EKGDFLTKVKHAEEFLDHGNKVKLRLKFRGREMARPELGFDVI 157 >gi|225850054|ref|YP_002730288.1| translation initiation factor IF-3 [Persephonella marina EX-H1] gi|225645181|gb|ACO03367.1| translation initiation factor IF-3 [Persephonella marina EX-H1] Length = 116 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 +CKI+D K ++ +K EA+KKQ++ +KE+K R I+ HD + K+K I F+ DG Sbjct: 1 MCKIMDYGKYKFEQKKKEKEAKKKQRAKMQNVKEIKFRVKIEDHDYRTKVKHIREFIEDG 60 Query: 80 CKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 KVK+ + FRGRE +H ++G L I E +I++++ PK EGR MI L K Sbjct: 61 DKVKVWIWFRGRENVHPEIGERLAHRIIEDLSDIAKVEKPPKKEGRNMIFTLVPK 115 >gi|171855144|sp|A7ZAZ8|IF3_CAMC1 RecName: Full=Translation initiation factor IF-3 gi|158604893|gb|EAT99125.3| translation initiation factor IF-3 [Campylobacter concisus 13826] Length = 172 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++ + LDLV I P VCKI+D K RY +K EA+KKQK+ IKE+K+ I Sbjct: 37 LEISNKLGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E + + D EP Sbjct: 97 AQNDINYKVKHASEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWEMIKDEADRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 157 IIEGRYVNMLVTPK 170 >gi|320539026|ref|ZP_08038701.1| protein chain initiation factor IF-3 [Serratia symbiotica str. Tucson] gi|320030959|gb|EFW12963.1| protein chain initiation factor IF-3 [Serratia symbiotica str. Tucson] Length = 116 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF-- 110 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ ++ Sbjct: 28 EIKFRPGTDDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRRDLCE 87 Query: 111 -GEISRIDCEP-KFEGRQMIMILSSK 134 +++ ++ P K EGRQMIM+L+ K Sbjct: 88 EADLAVVESFPTKIEGRQMIMVLAPK 113 >gi|157164257|ref|YP_001465956.1| translation initiation factor IF-3 [Campylobacter concisus 13826] Length = 165 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++ + LDLV I P VCKI+D K RY +K EA+KKQK+ IKE+K+ I Sbjct: 30 LEISNKLGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEIKEIKLSVKI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E + + D EP Sbjct: 90 AQNDINYKVKHASEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWEMIKDEADRDKEP 149 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 150 IIEGRYVNMLVTPK 163 >gi|293396369|ref|ZP_06640647.1| translation initiation factor IF3 [Serratia odorifera DSM 4582] gi|291421158|gb|EFE94409.1| translation initiation factor IF3 [Serratia odorifera DSM 4582] Length = 116 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 4/86 (4%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E Sbjct: 28 EIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCE 87 Query: 113 ---ISRIDCEP-KFEGRQMIMILSSK 134 ++ ++ P K EGRQMIM+L+ K Sbjct: 88 DSDLAVVESFPTKIEGRQMIMVLAPK 113 >gi|253758563|ref|XP_002488886.1| hypothetical protein SORBIDRAFT_2483s002010 [Sorghum bicolor] gi|241947287|gb|EES20432.1| hypothetical protein SORBIDRAFT_2483s002010 [Sorghum bicolor] Length = 107 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 14/121 (11%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P K EA+K QK +KEV++ I+ Sbjct: 1 MAITKNLDLVKIVPNGAPP--------------GKKEKEAKKNQKVVSLKEVRLSAKIEE 46 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+K+ FL+DG KVK+S+KFRGRE+ + G+++L E+ + +PK Sbjct: 47 HDFDVKVKSAYKFLKDGDKVKVSIKFRGREMKYTSDGKDVLEKFTSVVSEVGVAERQPKL 106 Query: 123 E 123 E Sbjct: 107 E 107 >gi|14278593|pdb|1I96|V Chain V, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) Length = 89 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 54/83 (65%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +K +K R ID HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E Sbjct: 2 VKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDL 61 Query: 111 GEISRIDCEPKFEGRQMIMILSS 133 +++ ++ +P+ GR M M+L+ Sbjct: 62 KDLAVVEMKPEMLGRDMNMLLAP 84 >gi|283955361|ref|ZP_06372860.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 414] gi|283793121|gb|EFC31891.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 414] Length = 172 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +KN + +KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKNKKKQKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKIKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|145351023|ref|XP_001419887.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580120|gb|ABO98180.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 151 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 8/106 (7%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK----KQKSTGIKEVKMRPVIDLHD 64 +DLVE++ + +P VC+ILD ++RY I+K A E +K QK IKE+++ ID+HD Sbjct: 15 MDLVEVNGNASPPVCRILDYERVRYDIRKRAKEQKKAVSAAQKRDVIKELRLTAKIDVHD 74 Query: 65 LQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD----LGRELLSNI 106 L VK+ FL G +V + F+ + + QD G E++ NI Sbjct: 75 LNVKINGAKKFLDAGNRVTFRIMFKNSDGIAQDKRATRGAEIMDNI 120 >gi|45442010|ref|NP_993549.1| translation initiation factor IF-3 [Yersinia pestis biovar Microtus str. 91001] gi|108807772|ref|YP_651688.1| translation initiation factor IF-3 [Yersinia pestis Antiqua] gi|108812049|ref|YP_647816.1| translation initiation factor IF-3 [Yersinia pestis Nepal516] gi|145598021|ref|YP_001162097.1| translation initiation factor IF-3 [Yersinia pestis Pestoides F] gi|162420706|ref|YP_001607031.1| translation initiation factor IF-3 [Yersinia pestis Angola] gi|165927507|ref|ZP_02223339.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165939537|ref|ZP_02228083.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. IP275] gi|166011845|ref|ZP_02232743.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211128|ref|ZP_02237163.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167400943|ref|ZP_02306449.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422150|ref|ZP_02313903.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424947|ref|ZP_02316700.1| translation initiation factor IF-3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024060|ref|YP_001720565.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis YPIII] gi|186895721|ref|YP_001872833.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis PB1/+] gi|229837959|ref|ZP_04458118.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895120|ref|ZP_04510296.1| Translation initiation factor 3 [Yersinia pestis Pestoides A] gi|229898520|ref|ZP_04513665.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229902361|ref|ZP_04517481.1| Translation initiation factor 3 [Yersinia pestis Nepal516] gi|238753685|ref|ZP_04615047.1| Translation initiation factor IF-3 [Yersinia ruckeri ATCC 29473] gi|270490459|ref|ZP_06207533.1| translation initiation factor IF-3 [Yersinia pestis KIM D27] gi|294503567|ref|YP_003567629.1| protein chain initiation factor IF-3 [Yersinia pestis Z176003] gi|21958723|gb|AAM85471.1|AE013793_7 protein chain initiation factor IF-3 [Yersinia pestis KIM 10] gi|45436873|gb|AAS62426.1| protein chain initiation factor IF-3 [Yersinia pestis biovar Microtus str. 91001] gi|108775697|gb|ABG18216.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Nepal516] gi|108779685|gb|ABG13743.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Antiqua] gi|145209717|gb|ABP39124.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Pestoides F] gi|162353521|gb|ABX87469.1| translation initiation factor IF-3 [Yersinia pestis Angola] gi|165912586|gb|EDR31217.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. IP275] gi|165920562|gb|EDR37839.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165989310|gb|EDR41611.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166208308|gb|EDR52788.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166958962|gb|EDR55983.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049796|gb|EDR61204.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056134|gb|EDR65912.1| translation initiation factor IF-3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750594|gb|ACA68112.1| initiation factor 3 [Yersinia pseudotuberculosis YPIII] gi|186698747|gb|ACC89376.1| initiation factor 3 [Yersinia pseudotuberculosis PB1/+] gi|229680696|gb|EEO76792.1| Translation initiation factor 3 [Yersinia pestis Nepal516] gi|229688068|gb|EEO80139.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229694325|gb|EEO84372.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701882|gb|EEO89905.1| Translation initiation factor 3 [Yersinia pestis Pestoides A] gi|238708237|gb|EEQ00593.1| Translation initiation factor IF-3 [Yersinia ruckeri ATCC 29473] gi|262361609|gb|ACY58330.1| protein chain initiation factor IF-3 [Yersinia pestis D106004] gi|262365650|gb|ACY62207.1| protein chain initiation factor IF-3 [Yersinia pestis D182038] gi|270338963|gb|EFA49740.1| translation initiation factor IF-3 [Yersinia pestis KIM D27] gi|294354026|gb|ADE64367.1| protein chain initiation factor IF-3 [Yersinia pestis Z176003] gi|320015089|gb|ADV98660.1| Translation initiation factor 3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 116 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 4/86 (4%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E Sbjct: 28 EIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCE 87 Query: 113 ISRIDCEPKF----EGRQMIMILSSK 134 S + F EGRQMIM+L+ K Sbjct: 88 DSDLAVVESFPTRIEGRQMIMVLAPK 113 >gi|57237211|ref|YP_178223.1| translation initiation factor IF-3 [Campylobacter jejuni RM1221] gi|86149587|ref|ZP_01067817.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151171|ref|ZP_01069386.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 260.94] gi|88597388|ref|ZP_01100623.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 84-25] gi|121612832|ref|YP_999927.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926369|ref|ZP_01810053.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157414516|ref|YP_001481772.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81116] gi|218561886|ref|YP_002343665.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|14194838|sp|Q9PIS2|IF3_CAMJE RecName: Full=Translation initiation factor IF-3 gi|73621049|sp|Q5HWW2|IF3_CAMJR RecName: Full=Translation initiation factor IF-3 gi|166198954|sp|A1VXT6|IF3_CAMJJ RecName: Full=Translation initiation factor IF-3 gi|172047020|sp|A8FK08|IF3_CAMJ8 RecName: Full=Translation initiation factor IF-3 gi|57166015|gb|AAW34794.1| translation initiation factor IF-3 [Campylobacter jejuni RM1221] gi|85839855|gb|EAQ57114.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841518|gb|EAQ58765.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 260.94] gi|87250449|gb|EAQ73407.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190449|gb|EAQ94423.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359592|emb|CAL34376.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844761|gb|EDK21866.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157385480|gb|ABV51795.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81116] gi|284925498|gb|ADC27850.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni IA3902] gi|307747158|gb|ADN90428.1| Translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni M1] gi|315057644|gb|ADT71973.1| Translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni S3] gi|315928138|gb|EFV07456.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930218|gb|EFV09333.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 305] gi|315932016|gb|EFV10969.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 327] Length = 172 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|57168348|ref|ZP_00367482.1| translation initiation factor IF-3 [Campylobacter coli RM2228] gi|57020156|gb|EAL56830.1| translation initiation factor IF-3 [Campylobacter coli RM2228] Length = 165 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 30 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 90 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEP 149 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 150 NFEGRYVNMLVTPK 163 >gi|305432764|ref|ZP_07401923.1| translation initiation factor IF3 [Campylobacter coli JV20] gi|304444161|gb|EFM36815.1| translation initiation factor IF3 [Campylobacter coli JV20] Length = 172 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|222823075|ref|YP_002574648.1| translation initiation factor IF-3 [Campylobacter lari RM2100] gi|254803484|sp|B9KEB2|IF3_CAMLR RecName: Full=Translation initiation factor IF-3 gi|222538296|gb|ACM63397.1| translation initiation factor IF-3 [Campylobacter lari RM2100] Length = 173 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LDIANRLGLDLVMIAPEAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + G LL I + +I+ D EP Sbjct: 97 AQNDINYKVKHASEFLEQGKHVKFRVFLKGREMGSPEAGVALLEKIWQMVEDIADRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 157 LLEGRYVNMLVTPK 170 >gi|157370385|ref|YP_001478374.1| translation initiation factor IF-3 [Serratia proteamaculans 568] gi|270261558|ref|ZP_06189831.1| translation initiation factor IF-3 [Serratia odorifera 4Rx13] gi|157322149|gb|ABV41246.1| initiation factor 3 [Serratia proteamaculans 568] gi|270045042|gb|EFA18133.1| translation initiation factor IF-3 [Serratia odorifera 4Rx13] Length = 116 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 4/86 (4%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E Sbjct: 28 EIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCE 87 Query: 113 ISRIDCEPKF----EGRQMIMILSSK 134 S + F EGRQMIM+L+ K Sbjct: 88 DSDLAIVESFPTRIEGRQMIMVLAPK 113 >gi|153827551|ref|ZP_01980218.1| translation initiation factor IF-3, C- domain [Vibrio cholerae MZO-2] gi|149738484|gb|EDM52880.1| translation initiation factor IF-3, C- domain [Vibrio cholerae MZO-2] gi|327485486|gb|AEA79892.1| Translation initiation factor 3 [Vibrio cholerae LMA3894-4] gi|327485491|gb|AEA79897.1| Translation initiation factor 3 [Vibrio cholerae LMA3894-4] Length = 76 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP- 120 + D QVKL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P Sbjct: 1 MGDYQVKLRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPT 60 Query: 121 KFEGRQMIMILSSK 134 K E RQMIM+L+ K Sbjct: 61 KIEARQMIMVLAPK 74 >gi|256370660|ref|YP_003108485.1| translation initiation factor 3 [Candidatus Sulcia muelleri SMDSEM] gi|256009452|gb|ACU52812.1| translation initiation factor 3 [Candidatus Sulcia muelleri SMDSEM] Length = 173 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 82/137 (59%), Gaps = 8/137 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI+S P + +I+D +K Y +K + ++++ T KE+++ I Sbjct: 40 LKRASNLGLDLVEINSKTNPPIGRIIDYKKFLYEQKKKTKKYKQEKMRT--KEIRLTTQI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 HDL K K + FL+ KVK ++ F+GR I+H++ G+ LL ++ E+FG+I +I Sbjct: 98 CEHDLLFKRKHAERFLKSKEKVKFTIFFKGRSIIHKEKGKILLLKCASYLEKFGKIEQI- 156 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++M +ILS K Sbjct: 157 --PIMEGKKMYIILSPK 171 >gi|86153689|ref|ZP_01071892.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842650|gb|EAQ59862.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 172 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK +KE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDVKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|18417644|ref|NP_567851.1| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|14596121|gb|AAK68788.1| putative protein [Arabidopsis thaliana] gi|18377498|gb|AAL66915.1| putative protein [Arabidopsis thaliana] gi|332660396|gb|AEE85796.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 281 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLV + P V +++D K RY QK E +KK +KE+KM ID H Sbjct: 118 AEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKTTRMDLKELKMGYNIDQH 177 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D V+++A FL+DG KVK+ V +GRE +++ ELL + GE+ + + F Sbjct: 178 DYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESK-NFR 236 Query: 124 GRQMIMIL 131 R + ++L Sbjct: 237 DRNLFIVL 244 >gi|153951486|ref|YP_001397451.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. doylei 269.97] gi|283955646|ref|ZP_06373139.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 1336] gi|166198953|sp|A7H1S1|IF3_CAMJD RecName: Full=Translation initiation factor IF-3 gi|152938932|gb|ABS43673.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. doylei 269.97] gi|283792871|gb|EFC31647.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 1336] Length = 172 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 72/134 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVVLLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPK 170 >gi|296271846|ref|YP_003654477.1| translation initiation factor IF-3 [Arcobacter nitrofigilis DSM 7299] gi|296096021|gb|ADG91971.1| translation initiation factor IF-3 [Arcobacter nitrofigilis DSM 7299] Length = 175 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 69/134 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLV I P V KI+D K +Y +K EARK QK +KEVK I Sbjct: 40 LKTADEQGLDLVLIAPEGKPPVAKIMDYSKFKYQQEKKKKEARKNQKVIVLKEVKFSVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ H + G E+L + + D EP Sbjct: 100 AENDINYKVKHAIEFLEKGFHVKCRVFLKGREMAHPEAGVEVLEKVWPMLEDYGDRDSEP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR + M++ K Sbjct: 160 KLEGRFVNMMVLPK 173 >gi|297802960|ref|XP_002869364.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp. lyrata] gi|297315200|gb|EFH45623.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp. lyrata] Length = 288 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLV + P V +++D K RY QK E +KK +KE+KM ID H Sbjct: 125 AEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKTTRMDLKELKMGYNIDQH 184 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D V+++A FL+DG KVK+ V +GRE +++ ELL + GE++ + + F Sbjct: 185 DYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELATEESK-NFR 243 Query: 124 GRQMIMIL 131 R + + L Sbjct: 244 DRNLFITL 251 >gi|224143922|ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1| predicted protein [Populus trichocarpa] Length = 278 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST--GIKEVKMRP 58 +QMA++ L+LV + P V +I+D K RY QK +KK ++ +KE+KM Sbjct: 118 IQMAEDTELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGY 177 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL+DG KVK+ V +GRE ++ ELL + GE++ + Sbjct: 178 NIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEES 237 Query: 119 EPKFEGRQMIMIL 131 + F R + L Sbjct: 238 K-NFRDRNAFITL 249 >gi|118474606|ref|YP_892821.1| translation initiation factor IF-3 [Campylobacter fetus subsp. fetus 82-40] gi|166198951|sp|A0RRI8|IF3_CAMFF RecName: Full=Translation initiation factor IF-3 gi|118413832|gb|ABK82252.1| translation initiation factor IF-3 [Campylobacter fetus subsp. fetus 82-40] Length = 172 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 71/132 (53%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A LDLV I P VCKI+D K RY +K EA+KKQK +KE+K+ I Sbjct: 39 IANRMGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIEVKEIKLSVKIAQ 98 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D+ K+K FL +G VK V +GRE+ D+G +L I E + + D P Sbjct: 99 NDINYKIKHAQEFLEEGKHVKFRVFLKGREMATPDIGVVMLERIWELVKDYADRDKVPAL 158 Query: 123 EGRQMIMILSSK 134 EGR + M+++ K Sbjct: 159 EGRYVNMLVTPK 170 >gi|255627037|gb|ACU13863.1| unknown [Glycine max] Length = 243 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEA--RKKQKSTGIKEVKMRPV 59 QMAQ++ LDLV + P V +++D K +Y QK R +KE+KM Sbjct: 81 QMAQDSELDLVIVSPDADPPVVRMMDYNKYKYEQQKKKKGQQKRSAANRMDLKELKMGYN 140 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 ID HD V+LKA FL+DG KVK+ V +GRE +++ EL+ + GE++ + + Sbjct: 141 IDQHDYSVRLKAAQKFLKDGDKVKVIVNLKGRETEFRNIAIELIKRFQSDVGELATEETK 200 Query: 120 PKFEGRQMIMILSSK 134 F R M +++ K Sbjct: 201 -SFRDRNMSIVMVPK 214 >gi|315639343|ref|ZP_07894505.1| translation initiation factor IF3 [Campylobacter upsaliensis JV21] gi|315480669|gb|EFU71311.1| translation initiation factor IF3 [Campylobacter upsaliensis JV21] Length = 172 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P V KI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LGIANRLGLDLVLIAPDAKPPVAKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + + G LL I + + + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVKFRVFLKGREMSNPEAGVALLEKIWQSIEDKANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K V Sbjct: 157 LFEGRYVNMLVTPKKV 172 >gi|57506156|ref|ZP_00372077.1| translation initiation factor IF-3 [Campylobacter upsaliensis RM3195] gi|57015551|gb|EAL52344.1| translation initiation factor IF-3 [Campylobacter upsaliensis RM3195] Length = 172 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P V KI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LGIANRLGLDLVLIAPDAKPPVAKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + + G LL I + + + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVKFCVFLKGREMSNPEAGVALLEKIWQSIEDKANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K V Sbjct: 157 LFEGRYVNMLVTPKKV 172 >gi|157736343|ref|YP_001489026.1| translation initiation factor IF-3 [Arcobacter butzleri RM4018] gi|315635478|ref|ZP_07890744.1| translation initiation factor IF3 [Arcobacter butzleri JV22] gi|157698197|gb|ABV66357.1| translation initiation factor IF-3 [Arcobacter butzleri RM4018] gi|315480236|gb|EFU70903.1| translation initiation factor IF3 [Arcobacter butzleri JV22] Length = 175 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 74/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLV I P V KI+D K RY +K EA+K QK IKE+K+ I Sbjct: 40 LALADEMGLDLVLIAPDGKPPVAKIMDYGKFRYQQEKKKKEAKKNQKVIVIKEIKLSVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G V+ V +GRE+ + G ++L+ I +I+ +D EP Sbjct: 100 AENDVNYKVKHAREFLEEGNHVRFRVFLKGREMANPQSGIDVLNKIWPMVEDIAVMDKEP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR + +++ K Sbjct: 160 KLEGRYVNLLVLPK 173 >gi|160902176|ref|YP_001567757.1| translation initiation factor IF-3 [Petrotoga mobilis SJ95] gi|160359820|gb|ABX31434.1| translation initiation factor IF-3 [Petrotoga mobilis SJ95] Length = 175 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 77/131 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV + P V +++D K Y +K A+KKQK +KE+K R I Sbjct: 37 LKLAEQSGVDLVLVAPEAKPPVARMMDYGKYIYEKEKKEKLAKKKQKKQVLKEMKFRLRI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK I FL DG KV+ + F GR+I+ ++ G+E+L + + +I+++ Sbjct: 97 DDHDFNTKLKKIREFLEDGYKVRAVIMFLGRDILFKEKGKEILDKVVSQTSDIAKVSRGA 156 Query: 121 KFEGRQMIMIL 131 K G+ M +IL Sbjct: 157 KLLGKDMDIIL 167 >gi|193216575|ref|YP_001999817.1| translation initiation factor IF-3 [Mycoplasma arthritidis 158L3-1] gi|193001898|gb|ACF07113.1| translation initiation factor IF-3 [Mycoplasma arthritidis 158L3-1] Length = 171 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 70/128 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E N+DLV I + +I+D K +Y +K ++ Q T +E+++ P+I Sbjct: 18 LEKAYEYNMDLVLIAIENNKPITRIIDYGKFKYDKKKKQKSLKENQSVTINREIRLTPMI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K K FL +G +VK+SVKFRGRE QDLG ++L+ ++++I E Sbjct: 78 GDHDLATKAKKAKEFLLEGNRVKVSVKFRGRERTRQDLGDDILAKFFALLEDVAKISKEA 137 Query: 121 KFEGRQMI 128 G + + Sbjct: 138 TLSGGRFL 145 >gi|547710|sp|P36177|IF3C_EUGGR RecName: Full=Translation initiation factor IF-3, chloroplastic; Short=IF-3chl; Flags: Precursor gi|475786|gb|AAA20996.1| chloroplast initiation factor 3 [Euglena gracilis] Length = 538 Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 76/132 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ ++DLV + P V K+++ KL+Y +K ++ KK K +KE+K+ I Sbjct: 339 LELAEAEDIDLVLVSIDTDPPVAKLVNYSKLKYESEKKKKDSHKKGKVKEVKELKVSHKI 398 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V++K FL G ++K+S++F+GRE ++GR ++ + ++ + D P Sbjct: 399 GQHDYDVRVKQARKFLEGGHRIKVSMEFKGRENQFVEIGRAVMKRFQNDLADMGKADAVP 458 Query: 121 KFEGRQMIMILS 132 K G ++I+ L+ Sbjct: 459 KKLGTRLILNLA 470 >gi|242309943|ref|ZP_04809098.1| translation initiation factor-3 [Helicobacter pullorum MIT 98-5489] gi|239523240|gb|EEQ63106.1| translation initiation factor-3 [Helicobacter pullorum MIT 98-5489] Length = 171 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAEDKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVASMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+++ K Sbjct: 157 KVEGRYVNMLVTPK 170 >gi|154149436|ref|YP_001406199.1| translation initiation factor IF-3 [Campylobacter hominis ATCC BAA-381] gi|166198952|sp|A7I108|IF3_CAMHC RecName: Full=Translation initiation factor IF-3 gi|153805445|gb|ABS52452.1| translation initiation factor IF-3 [Campylobacter hominis ATCC BAA-381] Length = 173 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ++ LDLV I P V KI+D +K Y +K EA+KKQK IKE+K I Sbjct: 37 LEVAYQSGLDLVLIAPDAKPPVAKIMDYKKFCYQQEKKLKEAKKKQKVIEIKEIKFSAKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 +D+ K+K FL D VK+ V +GREI ++G LL+ I + + E + + E Sbjct: 97 AQNDVNYKIKHAKEFLDDDKHVKLRVFLKGREIATPEIGVNLLNKIWDEYFEGNATKEKE 156 Query: 120 PKFEGRQMIMILSSKCV 136 P EGR + M+++ K V Sbjct: 157 PIIEGRYVSMLVTPKKV 173 >gi|224088324|ref|XP_002308411.1| predicted protein [Populus trichocarpa] gi|222854387|gb|EEE91934.1| predicted protein [Populus trichocarpa] Length = 208 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 10/136 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG-----IKEVK 55 +QMA++A LDL+ D+ P V +I+D K RY + + +++KS G +E+K Sbjct: 11 IQMAEDAELDLLSPDAD--PPVVRIMDYNKFRY--EPQKKKREQQKKSAGECLFYFRELK 66 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID HD V+L+A FL+DG KVK+ V RE +++ EL+ + GE++ Sbjct: 67 MGYNIDQHDYDVRLRAAQNFLKDGDKVKVIVNLNWRENEFRNIAIELIRRFQNFVGELAT 126 Query: 116 IDCEPKFEGRQMIMIL 131 + + F R + + L Sbjct: 127 EESK-NFHDRNIFISL 141 >gi|168004365|ref|XP_001754882.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693986|gb|EDQ80336.1| predicted protein [Physcomitrella patens subsp. patens] Length = 312 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ----KSTGIKEVKM 56 + AQ+ LDLVE+D P VCK++D + R+ ++K + RKKQ + +KEV+ Sbjct: 137 LNRAQQEGLDLVEVDGKADPPVCKLMDFSRERFKVKKQEKDLRKKQLERRRLDDLKEVRF 196 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 + DL++K + L G +VK++V+F G + +++G ELL G ++ Sbjct: 197 SSRTEQKDLEMKADVVTRLLTRGHRVKLAVQFHGND-KGEEVGVELLERAMRLLGVEVKV 255 Query: 117 DCEPKFEG-RQMIMI 130 + P+ E R +MI Sbjct: 256 ENGPRVEKMRAWVMI 270 >gi|224417828|ref|ZP_03655834.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] gi|313141369|ref|ZP_07803562.1| translation initiation factor-3 [Helicobacter canadensis MIT 98-5491] gi|313130400|gb|EFR48017.1| translation initiation factor-3 [Helicobacter canadensis MIT 98-5491] Length = 171 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAESKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKRQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVAAMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+++ K Sbjct: 157 KIEGRYVNMLVTPK 170 >gi|253827168|ref|ZP_04870053.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] gi|253510574|gb|EES89233.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] Length = 171 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAESKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKRQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVAAMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+++ K Sbjct: 157 KIEGRYVNMLVTPK 170 >gi|78486007|ref|YP_391932.1| initiation factor 3 [Thiomicrospira crunogena XCL-2] gi|78364293|gb|ABB42258.1| bacterial translation initiation factor 3 (bIF-3) [Thiomicrospira crunogena XCL-2] Length = 112 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 51/77 (66%) Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 RP + D VK++ + FL +G +VK+++ FRGREI H++LG +L +++ E++ + Sbjct: 32 RPGTEQGDYDVKMRNLMKFLENGDRVKVTIWFRGREITHKELGMRMLERVRDDIQEVATV 91 Query: 117 DCEPKFEGRQMIMILSS 133 + PK EGRQ+ M+++ Sbjct: 92 EQMPKMEGRQLQMMVAP 108 >gi|34764975|ref|ZP_00145302.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885687|gb|EAA23102.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 112 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 37 WNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 96 Query: 61 DLHDLQVKLKAIDGFL 76 D HDL+ KL G+L Sbjct: 97 DSHDLETKLNP--GYL 110 >gi|313681238|ref|YP_004058976.1| bacterial translation initiation factor 3 (bif-3) [Sulfuricurvum kujiense DSM 16994] gi|313154098|gb|ADR32776.1| bacterial translation initiation factor 3 (bIF-3) [Sulfuricurvum kujiense DSM 16994] Length = 176 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 65/134 (48%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E LDLV I P V KI+D K Y +K EARKKQ +KE+K+ I Sbjct: 38 MNKANEMGLDLVLISPDAKPPVAKIMDYGKFHYQEEKKKKEARKKQTKVEVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G V V RGRE+ H + +L + +I + P Sbjct: 98 ADNDVGYKVKHAREFLEEGKHVHFRVFLRGREMAHPESAVAVLQRVWPMVEDIGTMYKAP 157 Query: 121 KFEGRQMIMILSSK 134 + EGR M++ K Sbjct: 158 QMEGRYCNMMIHPK 171 >gi|148536295|gb|ABQ85699.1| translation initiation factor IF3 [Mycoplasma caviae] Length = 206 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 3/104 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 ++MA+E LDLV I SV P + +ILD K +Y +K A++KQ +++++ P+ Sbjct: 38 IEMAKEQRLDLVLI--SVQPKPIARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPL 95 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 I HDL VK K FL +G ++K+S+KFRGRE+ +LG + L Sbjct: 96 IGEHDLNVKAKKAREFLLEGDRIKVSLKFRGRELARPELGHKTL 139 >gi|20138508|sp|Q98QV2|IF3_MYCPU RecName: Full=Translation initiation factor IF-3 Length = 199 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + +A+ DLV I SV P + +ILD K +Y +K E ++KQ + +++++ P+ Sbjct: 46 LDIARGEKKDLVLI--SVQPKPIARILDYGKFKYDRKKKEKEQKEKQTNINNRQIRLTPL 103 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I HDL K K L G ++K+S+KF+GREI ++LG + L+ E+ +I++ID E Sbjct: 104 IGDHDLLTKAKKTRELLLKGDRIKVSLKFKGREIARKELGIDTLNRFYEQVEDIAKIDKE 163 Query: 120 PKF 122 PK Sbjct: 164 PKL 166 >gi|225848430|ref|YP_002728593.1| translation initiation factor IF-3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643240|gb|ACN98290.1| translation initiation factor IF-3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 110 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 53/89 (59%) Query: 46 QKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSN 105 Q +KE+K + I+ HD + K+K I F++DG KV++ + FRGRE +H +LG +L Sbjct: 21 QHVQEVKEMKFKLNIEKHDYETKIKHIREFIQDGDKVRVWIWFRGRENVHPELGDKLAQK 80 Query: 106 IKERFGEISRIDCEPKFEGRQMIMILSSK 134 I E +I+ ++ P EGR M+ L K Sbjct: 81 IIEDVSDIAVVEKTPVKEGRNMMFTLIPK 109 >gi|308808300|ref|XP_003081460.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] gi|116059923|emb|CAL55982.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] Length = 235 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVE----ARKKQKSTGIKEVKM 56 ++MA+ LDLVE++ + TP VC+++D + RY ++ E + K QK IKE+++ Sbjct: 91 LRMARAMGLDLVEVNGTQTPPVCRMMDYERARYEQRRKMKEQKKASTKAQKRDVIKELRL 150 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD----LGRELLSNIKERFGE 112 ID HDL+ K+ FL G +V + F+ + + D G E++ N+ + Sbjct: 151 TAKIDAHDLRTKMSGAKKFLEAGNRVTFRIMFKKSDGIALDKRATRGPEIMENVMSMLED 210 Query: 113 ISRIDCEPKFEGRQ 126 + + PK G Q Sbjct: 211 VEVVSA-PKMVGLQ 223 >gi|15828730|ref|NP_326090.1| translation initiation factor IF-3 [Mycoplasma pulmonis UAB CTIP] gi|14089672|emb|CAC13432.1| TRANSLATION INITIATION FACTOR IF-3 [Mycoplasma pulmonis] Length = 236 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + +A+ DLV I SV P + +ILD K +Y +K E ++KQ + +++++ P+ Sbjct: 83 LDIARGEKKDLVLI--SVQPKPIARILDYGKFKYDRKKKEKEQKEKQTNINNRQIRLTPL 140 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I HDL K K L G ++K+S+KF+GREI ++LG + L+ E+ +I++ID E Sbjct: 141 IGDHDLLTKAKKTRELLLKGDRIKVSLKFKGREIARKELGIDTLNRFYEQVEDIAKIDKE 200 Query: 120 PK 121 PK Sbjct: 201 PK 202 >gi|462397|sp|Q05426|IF3_MYCFE RecName: Full=Translation initiation factor IF-3 gi|150149|gb|AAA25413.1| translation initiation factor IF3 [Mycoplasma fermentans] Length = 212 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 ++MA+E LDLV I SV P + +ILD K +Y +K A++KQ +++++ P+ Sbjct: 44 IEMAKEQRLDLVLI--SVQPKPIARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPL 101 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 I HDL VK + FL DG ++K+S+KFRGRE +LG + L Sbjct: 102 IGEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTL 145 >gi|238809864|dbj|BAH69654.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 218 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 ++MA+E LDLV I SV P + +ILD K +Y +K A++KQ +++++ P+ Sbjct: 50 IEMAKEQRLDLVLI--SVQPKPIARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPL 107 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 I HDL VK + FL DG ++K+S+KFRGRE +LG + L Sbjct: 108 IGEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTL 151 >gi|308189883|ref|YP_003922814.1| translation initiation factor IF-3 [Mycoplasma fermentans JER] gi|319777080|ref|YP_004136731.1| translation initiation factor if-3 [Mycoplasma fermentans M64] gi|307624625|gb|ADN68930.1| translation initiation factor IF-3 [Mycoplasma fermentans JER] gi|318038155|gb|ADV34354.1| Translation initiation factor IF-3 [Mycoplasma fermentans M64] Length = 206 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 ++MA+E LDLV I SV P + +ILD K +Y +K A++KQ +++++ P+ Sbjct: 38 IEMAKEQRLDLVLI--SVQPKPIARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPL 95 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 I HDL VK + FL DG ++K+S+KFRGRE +LG + L Sbjct: 96 IGEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTL 139 >gi|205356548|ref|ZP_03223311.1| translation initiation factor IF3 [Campylobacter jejuni subsp. jejuni CG8421] gi|205345553|gb|EDZ32193.1| translation initiation factor IF3 [Campylobacter jejuni subsp. jejuni CG8421] Length = 124 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 64/121 (52%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 I + P VCKI+D K RY +K EA+KKQK IKE+K+ I +D+ K+K Sbjct: 2 IAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDINYKVKHAL 61 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL G V+ V +GRE+ + G LL I + D EP FEGR + M+++ Sbjct: 62 EFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEGRYVNMLVTP 121 Query: 134 K 134 K Sbjct: 122 K 122 >gi|148536298|gb|ABQ85701.1| translation initiation factor IF3 [Mycoplasma fermentans] Length = 202 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 ++MA+E LDLV I SV P + +ILD K +Y +K A++KQ +++++ P+ Sbjct: 38 IEMAKEQRLDLVLI--SVQPKPIARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPL 95 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 I HDL VK + FL DG ++K+S+KFRGRE +LG + L Sbjct: 96 IGEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTL 139 >gi|307128592|ref|YP_003880622.1| translation initiation factor 3 [Candidatus Sulcia muelleri CARI] gi|306483054|gb|ADM89924.1| translation initiation factor 3 [Candidatus Sulcia muelleri CARI] Length = 170 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 6/137 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI+ P +C+IL+ +K Y +K + + KQ+ KE+++ P I Sbjct: 36 LNIAFNTGLDLVEINPKTDPPICRILEYKKYLYEQKKKQKQLKYKQEKIITKEIRLSPQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL---SNIKERFGEISRID 117 HD K+K + FL+ KVK ++ F+GR I+H+ G LL +N E FG+I ++ Sbjct: 96 CEHDTFFKIKHAEKFLKTKKKVKFTIFFKGRSIIHKKKGEILLLECANYLENFGKIEQM- 154 Query: 118 CEPKFEGRQMIMILSSK 134 P EG++M +IL+ K Sbjct: 155 --PIMEGKKMFIILTPK 169 >gi|34557219|ref|NP_907034.1| translation initiation factor IF-3 [Wolinella succinogenes DSM 1740] gi|39931191|sp|Q7M9L9|IF3_WOLSU RecName: Full=Translation initiation factor IF-3 gi|34482935|emb|CAE09934.1| TRANSLATION INITIATION FACTOR-3 (IF3) [Wolinella succinogenes] Length = 176 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 38 LKIAQDLGLDLVLIAPEAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL + V+ V +GRE+ G E+L + E +I+ +D EP Sbjct: 98 AQNDVNYKVKHAKEFLEEDKHVRFRVFLKGREMSEPQSGVEVLKRVWELVEDIAIMDKEP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR + M + K Sbjct: 158 KPEGRYVNMTVIPK 171 >gi|311086441|gb|ADP66522.1| translation initiation factor IF-3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087589|gb|ADP67668.1| translation initiation factor IF-3 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 69 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSS 133 FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P K EGRQMIMIL+ Sbjct: 7 FLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFPSKIEGRQMIMILAP 66 Query: 134 K 134 K Sbjct: 67 K 67 >gi|13507854|ref|NP_109803.1| translation initiation factor IF-3 [Mycoplasma pneumoniae M129] gi|2497284|sp|P78024|IF3_MYCPN RecName: Full=Translation initiation factor IF-3 gi|11379447|gb|AAG34732.1|AE000004_1 translation initiation factor IF3 [Mycoplasma pneumoniae M129] Length = 201 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 51/91 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I S+ + K+LD + Y +++ +++K Q IKEV ++P I Sbjct: 65 LKMAEEKQLDLVLIGSNPAKPIVKLLDFGRYTYDLKRKKRQSKKNQTIIQIKEVVVKPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+ K K G+ G VK V+ GR Sbjct: 125 AKHDLEFKAKQTTGWAEKGYHVKFVVRAFGR 155 >gi|301633658|gb|ADK87212.1| translation initiation factor IF-3 [Mycoplasma pneumoniae FH] Length = 201 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 51/91 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I S+ + K+LD + Y +++ +++K Q IKEV ++P I Sbjct: 65 LKMAEEKQLDLVLIGSNPAKPIVKLLDFGRYTYDLKRKKRQSKKNQTIIQIKEVVVKPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+ K K G+ G VK V+ GR Sbjct: 125 AKHDLEFKAKQTTGWAEKGYHVKFVVRAFGR 155 >gi|212722014|ref|NP_001131934.1| hypothetical protein LOC100193325 [Zea mays] gi|194692956|gb|ACF80562.1| unknown [Zea mays] Length = 317 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 6/136 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLR---KLRY--TIQKNAVEARKKQKSTGIKEVK 55 +Q+A + +L L + P V ++ D R K RY +K + R K G+KE+K Sbjct: 121 VQIADDNDLILAILSMDGDPPVLRLFDERDYKKHRYEQQKKKKIQQKRSVAKRMGLKELK 180 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 181 MGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVNLKGRENLYKKEAIELLRRFQNDVGELAT 240 Query: 116 IDCEPKFEGRQMIMIL 131 + + F R + ++L Sbjct: 241 EESK-NFAERNIYLVL 255 >gi|71894616|ref|YP_278724.1| translation initiation factor IF-3 [Mycoplasma synoviae 53] Length = 200 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 3/136 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E DLV I + TP V +ILD K +Y +KN E ++KQ + KE+++ P I Sbjct: 42 LQIAKEQGKDLVLIATDPTP-VVRILDYGKFKYISKKNQKEKKEKQSNVQNKEIRLTPFI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI--SRIDC 118 DL+ K K +L G ++K+S+K RGREI ++LG E L + +I S +D Sbjct: 101 GKADLETKSKKAREYLLKGDRIKVSLKLRGREIARKELGFETLDKFYQTLVDICDSSLDV 160 Query: 119 EPKFEGRQMIMILSSK 134 + E I +L +K Sbjct: 161 KNPSERFLNINLLPNK 176 >gi|168019592|ref|XP_001762328.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686406|gb|EDQ72795.1| predicted protein [Physcomitrella patens subsp. patens] Length = 283 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ----KSTGIKEVKM 56 + AQ+A LDLVE+D P VCK++D K R+ ++K + RKKQ + +KEV+ Sbjct: 124 LNRAQQAGLDLVEVDGKADPPVCKLMDFSKERFKVKKQEKDLRKKQLERRRLDDLKEVRF 183 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 + DL +K + L G +VK+ V+F G + +++G +LL ++ Sbjct: 184 SSRTEQKDLDMKADVVTRLLVRGHRVKLVVQFHGND-KGEEVGVKLLERAMNLLQAEFKV 242 Query: 117 DCEPKFEG-RQMIMI 130 + P+ E R +MI Sbjct: 243 ENGPRVEKMRAWVMI 257 >gi|237750836|ref|ZP_04581316.1| translation initiation factor IF3 [Helicobacter bilis ATCC 43879] gi|229373281|gb|EEO23672.1| translation initiation factor IF3 [Helicobacter bilis ATCC 43879] Length = 174 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 70/130 (53%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A LDLV I + P VCKI++ K RY ++K EA+KKQK +KE+K+ I Sbjct: 37 NLAYNEGLDLVCISPNAKPPVCKIVEYGKYRYQLEKKQKEAKKKQKQVEVKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F +G VK V RGRE+ + G E+L + +I+ D E K Sbjct: 97 QNDINYKVKHAREFFEEGKHVKFRVYLRGREMQNPAGGFEMLKRVIAMVDDIAHADKEAK 156 Query: 122 FEGRQMIMIL 131 EG+ +++ Sbjct: 157 IEGKYASILM 166 >gi|144227475|gb|AAZ44213.2| translation initiation factor IF-3 [Mycoplasma hyopneumoniae J] Length = 217 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEI--------DSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I D+ + + KILD K RY I+K E ++KQ T Sbjct: 45 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 104 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 105 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 164 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 165 YIAKKSKEISQNGNFLVMHL 184 >gi|54020112|ref|YP_115769.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 232] gi|53987285|gb|AAV27486.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 232] gi|144575287|gb|AAZ53500.2| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 7448] gi|312601138|gb|ADQ90393.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 168] Length = 217 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEI--------DSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I D+ + + KILD K RY I+K E ++KQ T Sbjct: 45 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 104 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 105 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 164 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 165 YIAKKSKEISQNGNFLVMHL 184 >gi|72080465|ref|YP_287523.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 7448] Length = 218 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEI--------DSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I D+ + + KILD K RY I+K E ++KQ T Sbjct: 46 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 105 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 106 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 165 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 166 YIAKKSKEISQNGNFLVMHL 185 >gi|71893478|ref|YP_278924.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae J] Length = 218 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEI--------DSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I D+ + + KILD K RY I+K E ++KQ T Sbjct: 46 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 105 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 106 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 165 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 166 YIAKKSKEISQNGNFLVMHL 185 >gi|210134325|ref|YP_002300764.1| translation initiation factor IF-3 [Helicobacter pylori P12] gi|210132293|gb|ACJ07284.1| translation initiation factor If-3 [Helicobacter pylori P12] Length = 203 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + I K Sbjct: 156 KTEGRFVSWIFVPKA 170 >gi|325188187|emb|CCA22727.1| translation initiation factor IF3 putative [Albugo laibachii Nc14] Length = 240 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 17/117 (14%) Query: 1 MQMAQEANLDLVEI---DSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 ++MA+ A +DLV++ + + P++C++LD K + ++K +A K KE+ + Sbjct: 105 LEMAEAAKMDLVQVAEPKNGMGPTICRLLDANKRMFELKKGVKKAAKD------KEITLT 158 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 P I HDL VK++ I FL+ G V+++ ++ E LL +E+ GEI+ Sbjct: 159 PKIATHDLDVKVRRIKSFLKKGSTVRVTARWHRYE--------NLLEKAEEKMGEIT 207 >gi|119510605|ref|ZP_01629735.1| translation initiation factor 3 [Nodularia spumigena CCY9414] gi|119464766|gb|EAW45673.1| translation initiation factor 3 [Nodularia spumigena CCY9414] Length = 144 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 4/118 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + S V KI++ KL+Y +K ++ + +KEV+ RP + Sbjct: 18 LELAESLELDLVVVSESKDTPVAKIINYGKLQYQKKKRQTQSAR----PTVKEVRFRPNV 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 + D ++++ +L G VK +++ RGRE H++ E+L I E+ ++ Sbjct: 74 GIADYNLRIEQATQWLSKGDSVKFAIRLRGREHQHREQAGEMLDRIVAALSEVGKVQS 131 >gi|224373364|ref|YP_002607736.1| translation initiation factor IF-3 [Nautilia profundicola AmH] gi|254803490|sp|B9L5U8|IF3_NAUPA RecName: Full=Translation initiation factor IF-3 gi|223589072|gb|ACM92808.1| translation initiation factor IF-3 [Nautilia profundicola AmH] Length = 178 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 73/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV + + P V K++D K +Y +K EA+KKQ +KE+K I Sbjct: 39 LEIAYNKGLDLVLVAPNANPPVAKVMDYGKYKYEQEKKKKEAKKKQVKIEVKEIKFTSKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K I FL G VK+ V RGRE+ + G E+++ + + +++ EP Sbjct: 99 QENDINYKVKHIKEFLEKGKHVKLRVFLRGRELATPEKGFEVINKVWDMISDVAEKQNEP 158 Query: 121 KFEGRQMIMILSS 133 K EG + ++++ Sbjct: 159 KLEGNYINLLVTP 171 >gi|293363972|ref|ZP_06610708.1| translation initiation factor IF-3 [Mycoplasma alligatoris A21JP2] gi|292552462|gb|EFF41236.1| translation initiation factor IF-3 [Mycoplasma alligatoris A21JP2] Length = 195 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 1/122 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ +DLV I P + +ILD K +Y +K E ++KQ +EV++ P+I Sbjct: 38 IELARTEKMDLVLIQVEPKP-IARILDYGKFKYDRKKKQKEVKEKQVLVQNREVRLTPMI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL K K FL G ++K+S+K RGRE+ QDLG L+ +I+ I EP Sbjct: 97 GENDLMTKSKKAREFLLKGDRIKVSLKLRGREMGRQDLGLATLNKFFATLEDIAEITKEP 156 Query: 121 KF 122 K Sbjct: 157 KL 158 >gi|222623832|gb|EEE57964.1| hypothetical protein OsJ_08701 [Oryza sativa Japonica Group] Length = 305 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 6/136 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKKQ--KSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 116 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 175 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 176 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 235 Query: 116 IDCEPKFEGRQMIMIL 131 + + F+ R + ++L Sbjct: 236 EESK-NFQERNIYLVL 250 >gi|218191737|gb|EEC74164.1| hypothetical protein OsI_09264 [Oryza sativa Indica Group] Length = 305 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 6/136 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKKQ--KSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 116 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 175 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 176 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 235 Query: 116 IDCEPKFEGRQMIMIL 131 + + F+ R + ++L Sbjct: 236 EESK-NFQERNIYLVL 250 >gi|109947951|ref|YP_665179.1| translation initiation factor IF-3 [Helicobacter acinonychis str. Sheeba] gi|109715172|emb|CAK00180.1| translation initiation factor IF-3 [Helicobacter acinonychis str. Sheeba] Length = 203 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V RGRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLRGRESQNSRAGLDVLFRVQAMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|15644754|ref|NP_206924.1| translation initiation factor IF-3 [Helicobacter pylori 26695] gi|2497283|sp|P55973|IF3_HELPY RecName: Full=Translation initiation factor IF-3 gi|2313208|gb|AAD07193.1| translation initiation factor IF-3 (infC) [Helicobacter pylori 26695] Length = 203 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LHIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|115449193|ref|NP_001048376.1| Os02g0794400 [Oryza sativa Japonica Group] gi|47497598|dbj|BAD19668.1| translation initiation factor IF-3-like [Oryza sativa Japonica Group] gi|113537907|dbj|BAF10290.1| Os02g0794400 [Oryza sativa Japonica Group] Length = 200 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 6/136 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKKQ--KSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 11 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 70 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 71 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 130 Query: 116 IDCEPKFEGRQMIMIL 131 + + F+ R + ++L Sbjct: 131 EESK-NFQERNIYLVL 145 >gi|15611184|ref|NP_222835.1| translation initiation factor IF-3 [Helicobacter pylori J99] gi|7387798|sp|Q9ZMV2|IF3_HELPJ RecName: Full=Translation initiation factor IF-3 gi|4154622|gb|AAD05693.1| TRANSLATION INITIATION FACTOR IF-3 [Helicobacter pylori J99] Length = 203 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|188526927|ref|YP_001909614.1| translation initiation factor IF-3 [Helicobacter pylori Shi470] gi|188143167|gb|ACD47584.1| translation initiation factor IF-3 [Helicobacter pylori Shi470] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|269958326|ref|YP_003328113.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] gi|269848155|gb|ACZ48799.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] Length = 105 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 53/87 (60%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 + +S+ +KE+K R I+ +D +KL + GF+ G KVK+S++F GRE+ ++++G +L Sbjct: 6 QARSSSLKELKFRLNIEDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILD 65 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMIL 131 + ++R + P+ +G M M+ Sbjct: 66 RLVNDTEGVARPESSPRMDGNVMSMVF 92 >gi|217031885|ref|ZP_03437387.1| hypothetical protein HPB128_3g4 [Helicobacter pylori B128] gi|216946354|gb|EEC24959.1| hypothetical protein HPB128_3g4 [Helicobacter pylori B128] Length = 180 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|217034631|ref|ZP_03440038.1| hypothetical protein HP9810_881g24 [Helicobacter pylori 98-10] gi|216942926|gb|EEC22413.1| hypothetical protein HP9810_881g24 [Helicobacter pylori 98-10] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASTKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|315586097|gb|ADU40478.1| translation initiation factor IF3 [Helicobacter pylori 35A] gi|317176943|dbj|BAJ54732.1| translation initiation factor IF-3 [Helicobacter pylori F16] gi|317179929|dbj|BAJ57715.1| translation initiation factor IF-3 [Helicobacter pylori F32] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|297379345|gb|ADI34232.1| translation initiation factor IF-3 [Helicobacter pylori v225d] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|222475648|ref|YP_002564065.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] gi|255003641|ref|ZP_05278605.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Puerto Rico] gi|255004767|ref|ZP_05279568.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Virginia] gi|222419786|gb|ACM49809.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] Length = 105 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 53/87 (60%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 + +S+ +KE+K R I+ +D +KL + GF+ G KVK+S++F GRE+ ++++G +L Sbjct: 6 QARSSSLKELKFRLNIEDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILD 65 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMIL 131 + ++R + P+ +G M M+ Sbjct: 66 RLVNDTEGVARPESSPRMDGNVMSMVF 92 >gi|308182297|ref|YP_003926424.1| translation initiation factor IF-3 [Helicobacter pylori PeCan4] gi|308064482|gb|ADO06374.1| translation initiation factor IF-3 [Helicobacter pylori PeCan4] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|298736934|ref|YP_003729464.1| translation initiation factor IF-3 [Helicobacter pylori B8] gi|298356128|emb|CBI67000.1| translation initiation factor IF-3 [Helicobacter pylori B8] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|261837576|gb|ACX97342.1| translation initiation factor IF-3 [Helicobacter pylori 51] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|108562548|ref|YP_626864.1| translation initiation factor IF-3 [Helicobacter pylori HPAG1] gi|207092168|ref|ZP_03239955.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_AG0C1] gi|107836321|gb|ABF84190.1| translation initiation factor IF-3 [Helicobacter pylori HPAG1] gi|261838990|gb|ACX98755.1| translation initiation factor IF-3 [Helicobacter pylori 52] gi|317179510|dbj|BAJ57298.1| translation initiation factor IF-3 [Helicobacter pylori F30] gi|317181404|dbj|BAJ59188.1| translation initiation factor IF-3 [Helicobacter pylori F57] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|308061414|gb|ADO03302.1| translation initiation factor IF-3 [Helicobacter pylori Cuz20] Length = 203 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|254421673|ref|ZP_05035391.1| translation initiation factor IF-3, C-terminal domain [Synechococcus sp. PCC 7335] gi|196189162|gb|EDX84126.1| translation initiation factor IF-3, C-terminal domain [Synechococcus sp. PCC 7335] Length = 115 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 14/114 (12%) Query: 19 TPSVCKILDLRKLRYTIQKNAVEARKKQKS---TGIKEVKMRPVIDLHDLQVKLKAIDGF 75 TP V KILD K +Y ++RK+QK T +KEV++RP + D V++ + Sbjct: 8 TP-VAKILDYGKHQY-------QSRKRQKQSARTSVKEVRLRPNVGDSDYMVRINKAIAW 59 Query: 76 LRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 L G VK V+ RGRE H+D +LL+ + E ++S++ F+ R +++ Sbjct: 60 LERGDSVKFQVRLRGREHQHRDRATDLLNRVIEDLSKVSKVQT---FDRRSLMV 110 >gi|242066810|ref|XP_002454694.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor] gi|241934525|gb|EES07670.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor] Length = 314 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%) Query: 20 PSVCKIL---DLRKLRY--TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDG 74 P V ++ D +K RY +K + R K G+KE+KM ID+HD V+LKA Sbjct: 141 PPVLRLFEERDYKKHRYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAAKK 200 Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 FL+ G KVKI V +GRE +++ ELL + GE++ + + F R + ++L Sbjct: 201 FLKAGDKVKIIVNLKGRENLYKKEAIELLRRFQNDVGELATEESK-NFAERNIYLVL 256 >gi|168183456|ref|ZP_02618120.1| translation initiation factor IF-3 [Clostridium botulinum Bf] gi|182673373|gb|EDT85334.1| translation initiation factor IF-3 [Clostridium botulinum Bf] Length = 98 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 41/67 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVK 68 HD+++K Sbjct: 90 AHDIEIK 96 >gi|308062984|gb|ADO04871.1| translation initiation factor IF-3 [Helicobacter pylori Sat464] gi|332672964|gb|AEE69781.1| translation initiation factor IF3 [Helicobacter pylori 83] Length = 203 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 71/135 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 FNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|254778841|ref|YP_003056946.1| translation initiation factor IF-3 [Helicobacter pylori B38] gi|254000752|emb|CAX28676.1| Translation initiation factor IF-3 [Helicobacter pylori B38] Length = 203 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|255082722|ref|XP_002504347.1| predicted protein [Micromonas sp. RCC299] gi|226519615|gb|ACO65605.1| predicted protein [Micromonas sp. RCC299] Length = 390 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKK----QKSTGIKEVKMRPV 59 A++A LDLVE+++ P VC++LD RY ++ EARKK ++ +KE+++ Sbjct: 227 ARDAGLDLVEMNAKAVPPVCRMLDYDAFRYELRVKEREARKKAVERRRHDQVKELRLSAR 286 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 I +DL+ K + FL G KV ++F+ Sbjct: 287 ISTNDLRTKADQANRFLEQGHKVTARIEFK 316 >gi|317010402|gb|ADU84149.1| translation initiation factor IF-3 [Helicobacter pylori SouthAfrica7] Length = 203 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317008796|gb|ADU79376.1| translation initiation factor IF-3 [Helicobacter pylori India7] Length = 203 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317011968|gb|ADU82576.1| translation initiation factor IF-3 [Helicobacter pylori Lithuania75] Length = 203 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317013545|gb|ADU80981.1| translation initiation factor IF-3 [Helicobacter pylori Gambia94/24] Length = 203 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|307636814|gb|ADN79264.1| transcription initiation factor 3 [Helicobacter pylori 908] gi|325995403|gb|ADZ50808.1| Translation initiation factor 3 [Helicobacter pylori 2018] gi|325997001|gb|ADZ49209.1| Transcription initiation factor 3 [Helicobacter pylori 2017] Length = 197 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 30 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 90 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 150 KTEGRFVSWMFVPKA 164 >gi|254415472|ref|ZP_05029232.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196177653|gb|EDX72657.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 134 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ LDLV + V KILD K +Y +K ++ K +KEVK+RP + Sbjct: 8 LQLAKDVGLDLVVVSERKDAPVAKILDYGKHQYQQKKRQRQSSKPT----LKEVKLRPNV 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +++ +L G VK V+ RGRE H+D ELL + GE+ ++ Sbjct: 64 GESDYSLRINRAVEWLSKGDSVKFQVRLRGREHQHRDRATELLERVVSDLGEVGKVQS-- 121 Query: 121 KFEGRQMIM 129 F+ R +++ Sbjct: 122 -FDRRALVV 129 >gi|237752911|ref|ZP_04583391.1| translation initiation factor-3 [Helicobacter winghamensis ATCC BAA-430] gi|229375178|gb|EEO25269.1| translation initiation factor-3 [Helicobacter winghamensis ATCC BAA-430] Length = 171 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 73/134 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LSIADSRGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL + V+ V RGRE+ G E+L+ + +++ I+ + Sbjct: 97 ASNDINYKVKHAKEFLEENKHVRFRVFLRGREVSEPQGGFEVLNKVAAMLEDVANIERDF 156 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+++ K Sbjct: 157 KVEGRYVNMLVTPK 170 >gi|308183918|ref|YP_003928051.1| translation initiation factor IF-3 [Helicobacter pylori SJM180] gi|308059838|gb|ADO01734.1| translation initiation factor IF-3 [Helicobacter pylori SJM180] Length = 203 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|312984097|ref|ZP_07791444.1| translation initiation factor IF-3 [Lactobacillus crispatus CTV-05] gi|310894451|gb|EFQ43526.1| translation initiation factor IF-3 [Lactobacillus crispatus CTV-05] Length = 81 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 43/72 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 8 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 67 Query: 61 DLHDLQVKLKAI 72 + +D + KLK + Sbjct: 68 EGNDFETKLKHV 79 >gi|91201673|emb|CAJ74733.1| strongly similar to translation initiation factor IF-3 [Candidatus Kuenenia stuttgartiensis] Length = 150 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ +DLVE+ P VC++++ K K + +KQ+ +KE+++RP H Sbjct: 23 AKSVEMDLVEVAPEADPPVCRLMNYGK---FKYKQKKKKTQKQRVVQLKELRIRPKTGGH 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D+Q K++ FL + +V + + F+GRE H D+G +L+ +I++++ + + Sbjct: 80 DIQTKIRQARKFLENKDRVLVMMLFKGRERAHSDMGDSVLNQFAVELEDIAKVEKDRISD 139 Query: 124 GRQMIMILSSK 134 R+M +ILS K Sbjct: 140 DRRMGIILSPK 150 >gi|313678439|ref|YP_004056179.1| translation initiation factor IF-3 [Mycoplasma bovis PG45] gi|312950802|gb|ADR25397.1| translation initiation factor IF-3 [Mycoplasma bovis PG45] Length = 202 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ LDLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKLDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEGRQMI 128 + G + + Sbjct: 149 EIIGERFL 156 >gi|208434082|ref|YP_002265748.1| translation initiation factor IF-3 [Helicobacter pylori G27] gi|208432011|gb|ACI26882.1| translation initiation factor IF-3 [Helicobacter pylori G27] Length = 203 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 71/135 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 FNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|326487826|dbj|BAJ89752.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 528 Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTI---QKNAVEARKKQKSTG--IKEVK 55 +QMA LDLVE+D P VCKI+D K +Y QK ++ + G IKEV+ Sbjct: 94 LQMAARMGLDLVEVDRKSNPPVCKIMDFHKEKYNKDVQQKQRLKTKSAIALRGGDIKEVR 153 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + ++ D++VK AI + G KVK G E +DLG LS + ++ Sbjct: 154 FKAKTEIKDMKVKADAITRLMERGYKVKCMAMPAGNEA--EDLGGP-LSRLLGLIQDVCT 210 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 211 VESGPHLDSKHAYVIV 226 >gi|47459464|ref|YP_016326.1| translation initiation factor IF-3 [Mycoplasma mobile 163K] gi|47458794|gb|AAT28115.1| translation initiation factor if-3 [Mycoplasma mobile 163K] Length = 214 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 9/138 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPS-------VCKILDLRKLRYTIQKNAVEARKKQKSTGIKE 53 + A+ NLDLV I SV S + +ILD +Y +K E ++KQ +E Sbjct: 36 LDKAKAENLDLVLI--SVGKSEKGEPRPIVRILDYGLFKYDRKKKQKELKEKQTIIENRE 93 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 +++ P I HD++ K K FL +G ++KIS+KFRGRE Q+LG E L +I Sbjct: 94 IRLTPNIGDHDIKFKAKKAREFLMNGDRLKISLKFRGREKTRQELGHETLEKFIALLDDI 153 Query: 114 SRIDCEPKFEGRQMIMIL 131 +++ E F G + + + Sbjct: 154 AQVTKEATFTGGKFLDVF 171 >gi|291320423|ref|YP_003515686.1| translation initiation factor IF 3 [Mycoplasma agalactiae] gi|290752757|emb|CBH40732.1| Translation initiation factor IF 3 [Mycoplasma agalactiae] Length = 202 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKMDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEGRQMI 128 + G + + Sbjct: 149 EIIGERFL 156 >gi|148377738|ref|YP_001256614.1| translation initiation factor IF-3 [Mycoplasma agalactiae PG2] gi|148291784|emb|CAL59173.1| Translation initiation factor IF 3 [Mycoplasma agalactiae PG2] Length = 202 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKMDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEGRQMI 128 + G + + Sbjct: 149 EIIGERFL 156 >gi|312884193|ref|ZP_07743905.1| translation initiation factor 3 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368241|gb|EFP95781.1| translation initiation factor 3 [Vibrio caribbenthicus ATCC BAA-2122] Length = 55 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSK 134 K++++FRGRE+ HQD+G ++L +KE E++ ++ P K EGRQMIM+L+ K Sbjct: 1 KVTIRFRGREMAHQDIGVDVLHRLKEDTAELAVVESFPKKIEGRQMIMVLAPK 53 >gi|12045048|ref|NP_072858.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|255660201|ref|ZP_05405610.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|7443496|pir||T09691 translation initiation factor IF-3 - Mycoplasma genitalium gi|3844793|gb|AAC71414.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|166078910|gb|ABY79528.1| translation initiation factor IF-3 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 181 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 50/91 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV I + T + K+LD + Y +++ +A+K Q KEV ++P I Sbjct: 45 LKLAQEKQLDLVLIAPNPTKPIVKLLDFGRYTYDLKRKKRQAKKNQTIIQTKEVVVKPTI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+ + K ++ G VK V+ GR Sbjct: 105 AKHDLEFRAKQSKNWIEKGHHVKFIVRAFGR 135 >gi|2506777|sp|P47438|IF3_MYCGE RecName: Full=Translation initiation factor IF-3 Length = 184 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 50/91 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV I + T + K+LD + Y +++ +A+K Q KEV ++P I Sbjct: 48 LKLAQEKQLDLVLIAPNPTKPIVKLLDFGRYTYDLKRKKRQAKKNQTIIQTKEVVVKPTI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+ + K ++ G VK V+ GR Sbjct: 108 AKHDLEFRAKQSKNWIEKGHHVKFIVRAFGR 138 >gi|20532107|sp|Q8YUH8|IF3B_ANASP RecName: Full=Translation initiation factor IF-3-like Length = 163 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 10/121 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---IKEVKMR 57 +Q+AQ LDLV + S V KIL+ KL+Y + +K+Q + +KEV+ R Sbjct: 37 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQY-------QKKKRQGQSARPTVKEVRFR 89 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 P + D ++++ +L G VK +++ RGRE +++ ++L I ++ ++ Sbjct: 90 PNVGAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQ 149 Query: 118 C 118 Sbjct: 150 S 150 >gi|17229860|ref|NP_486408.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] gi|17131460|dbj|BAB74067.1| translation initiation factor 3 [Nostoc sp. PCC 7120] Length = 144 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 10/121 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---IKEVKMR 57 +Q+AQ LDLV + S V KIL+ KL+Y + +K+Q + +KEV+ R Sbjct: 18 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQY-------QKKKRQGQSARPTVKEVRFR 70 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 P + D ++++ +L G VK +++ RGRE +++ ++L I ++ ++ Sbjct: 71 PNVGAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQ 130 Query: 118 C 118 Sbjct: 131 S 131 >gi|3273403|gb|AAC24724.1| IL-2 inducible gene protein [Mus musculus] Length = 147 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 63/111 (56%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + +I+D K +Y +K ++KQ T +E+++ P+I HDL+ K Sbjct: 1 MDLVLISIENNKPITRIMDYGKFKYDKKKKQKAVKEKQSVTINREIRLTPLIGQHDLETK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + F+ +G +VK+SVKFRGRE DLG ++L+ +I+++ E Sbjct: 61 ARKAREFILEGNRVKVSVKFRGRERSRTDLGEDILNKFYVLIEDIAKVSKE 111 >gi|315453308|ref|YP_004073578.1| translation initiation factor IF-3 [Helicobacter felis ATCC 49179] gi|315132360|emb|CBY82988.1| translation initiation factor IF-3 [Helicobacter felis ATCC 49179] Length = 164 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 71/131 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I ++ P VC+++D K Y +K EA+KKQK IKE+K+ I Sbjct: 29 LKIARNKGLDLVLISANAKPPVCRVMDYGKYCYQAEKKLKEAKKKQKQIEIKEIKLSTQI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ +G VK V RGRE G ++L + +I+ EP Sbjct: 89 AQNDINYKVKHAREFIEEGKHVKFKVVLRGRESHDPKAGLDVLQRVHAMMSDIADAQKEP 148 Query: 121 KFEGRQMIMIL 131 K EGR ++ + Sbjct: 149 KTEGRFVMWLF 159 >gi|75906413|ref|YP_320709.1| translation initiation factor IF-3 [Anabaena variabilis ATCC 29413] gi|75700138|gb|ABA19814.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena variabilis ATCC 29413] Length = 144 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS-TGIKEVKMRPV 59 +Q+AQ LDLV + S V KIL+ KL+Y +K R+ Q + +KEV+ RP Sbjct: 18 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKK-----RQGQSARPTVKEVRFRPN 72 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI 106 + D ++++ +L G VK +++ RGRE +++ ++L I Sbjct: 73 VGAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERI 119 >gi|294155483|ref|YP_003559867.1| translation initiation factor IF-3 [Mycoplasma crocodyli MP145] gi|291600291|gb|ADE19787.1| translation initiation factor IF-3 [Mycoplasma crocodyli MP145] Length = 197 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 1/122 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ +DLV I P + +ILD K +Y +K E ++KQ +EV++ P+I Sbjct: 38 IDIAKSLKMDLVLIQVEPKP-IARILDYGKFKYDRKKKQKEVKEKQVVIQNREVRLTPMI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL K + FL G ++K+S+K RGREI QDLG L+ +I+ I E Sbjct: 97 GENDLMTKSRKAREFLLKGDRIKVSLKLRGREIGRQDLGIATLNKFFATLEDIAEITKEA 156 Query: 121 KF 122 K Sbjct: 157 KL 158 >gi|186683739|ref|YP_001866935.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|186466191|gb|ACC81992.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 6/119 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS-TGIKEVKMRPV 59 +Q+A+ LDLV + + KIL+ KL+Y +K R+ Q + +KEV+ Sbjct: 18 LQLAESLELDLVVVSQGKEAPIAKILNYGKLQYQKKK-----RQSQSARPTVKEVRFGLN 72 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 + + D ++++ G+L G VK +++ RGRE ++D ELL I + ++ +I Sbjct: 73 VGVADYNLRIEKAVGWLSKGDSVKFAIRLRGREHQYRDQAGELLDRIAKDLSQVGKIQS 131 >gi|149195434|ref|ZP_01872517.1| translation initiation factor IF-3 [Caminibacter mediatlanticus TB-2] gi|149134439|gb|EDM22932.1| translation initiation factor IF-3 [Caminibacter mediatlanticus TB-2] Length = 166 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 62/115 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV + + P V K++D K +Y ++ EA+KKQ +KE+K I Sbjct: 38 LEIAYNKGLDLVLVAPNANPPVAKVMDYGKYKYEQERKKKEAKKKQVKIEVKEIKFTSKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 +D+ K+K FL G VK+ V RGRE+ + G E+++ + + ++ + Sbjct: 98 QQNDIDYKVKHAREFLEKGKHVKLRVFLRGRELATPEKGFEVINKVWDMLKDVEK 152 >gi|312881549|ref|ZP_07741335.1| hypothetical protein VIBC2010_09427 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370826|gb|EFP98292.1| hypothetical protein VIBC2010_09427 [Vibrio caribbenthicus ATCC BAA-2122] Length = 99 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 50/79 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ Sbjct: 21 AEDAGMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIG 80 Query: 64 DLQVKLKAIDGFLRDGCKV 82 D QVKL+ + FL +G KV Sbjct: 81 DYQVKLRNLTRFLEEGNKV 99 >gi|186687118|ref|YP_001870261.1| initiation factor 3 [Nostoc punctiforme PCC 73102] gi|186469421|gb|ACC85220.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 4/118 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LQLAESLELDLVLVSEGKEAPVAKILNYGKLQYQKKKRQAQSARPV----VKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 + D +++++ G+L G VK +V+ RGRE ++D ELL + + ++ Sbjct: 74 GVADYKLRIEQAVGWLSKGDSVKFAVRLRGREHQYRDQAGELLDRVVSDLNSVGKVQS 131 >gi|186686941|ref|YP_001870134.1| initiation factor 3 [Nostoc punctiforme PCC 73102] gi|186469293|gb|ACC85093.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LQLAESLELDLVLVSEGKEAPVAKILNYGKLQYQKKKRQAQSARPV----VKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI 106 + D +++++ G+L G VK +V+ RGRE ++D ELL + Sbjct: 74 GVADYKLRIEQAVGWLSKGDSVKFAVRLRGREHQYRDQAGELLDRV 119 >gi|26554368|ref|NP_758302.1| translation initiation factor IF-3 [Mycoplasma penetrans HF-2] gi|26454378|dbj|BAC44706.1| translation initiation factor IF3 [Mycoplasma penetrans HF-2] Length = 170 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ +DLV S P + KI+D K Y +K E +K Q KE+K++P I Sbjct: 35 LDLAKSKGMDLVLFSSGDKP-IAKIIDYGKFVYESKKKNKENKKNQVKVKNKEIKVKPAI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 +HDLQV++K +L G +++ V GR DL EL + E G+++ + Sbjct: 94 GMHDLQVRVKNAKEWLESGYRIRFVVLTYGRIATKVDLVYELYNKFIEMVGDVATV 149 >gi|115443613|ref|NP_001045586.1| Os02g0101100 [Oryza sativa Japonica Group] gi|41052888|dbj|BAD07800.1| translation initiation factor 3 (IF-3)-like protein [Oryza sativa Japonica Group] gi|41053222|dbj|BAD08183.1| translation initiation factor 3 (IF-3)-like protein [Oryza sativa Japonica Group] gi|113535117|dbj|BAF07500.1| Os02g0101100 [Oryza sativa Japonica Group] gi|215695533|dbj|BAG90724.1| unnamed protein product [Oryza sativa Japonica Group] gi|218189858|gb|EEC72285.1| hypothetical protein OsI_05453 [Oryza sativa Indica Group] gi|222621989|gb|EEE56121.1| hypothetical protein OsJ_04988 [Oryza sativa Japonica Group] Length = 519 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 12/138 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-------KE 53 +Q+A +LDLVE+ P VCKI+D K +Y +K+ E + + + I KE Sbjct: 93 LQLAARMDLDLVEVHRKSDPPVCKIMDFHKEKY--KKDVKEKERLKTKSAIVLRGGENKE 150 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 V+ + +L DL+VK I + G +VK G E +DLG LS + ++ Sbjct: 151 VRFKGKTELKDLKVKADGITRLMERGYRVKCMAMPSGNE--EEDLGGP-LSRLLGLIQDV 207 Query: 114 SRIDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 208 CIVESGPHLDSKHAYVIV 225 >gi|240047801|ref|YP_002961189.1| Translation initiation factor IF-3 [Mycoplasma conjunctivae HRC/581] gi|239985373|emb|CAT05386.1| Translation initiation factor IF-3 [Mycoplasma conjunctivae] Length = 218 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 11/119 (9%) Query: 1 MQMAQEANLDLV----------EIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKST 49 ++MA+ +DLV E D V V KILD K RY +K ++KQ T Sbjct: 45 VKMAKNKGMDLVLIAIKEIKDKEDDEKVVKIPVAKILDYGKFRYDSKKKKKLEKEKQSFT 104 Query: 50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKE 108 +E+++ I+L D+++K K FL DG +VK++++FRGREI + G+++L + E Sbjct: 105 NNREIRISFNINLQDIKIKAKKAKEFLLDGDRVKVALRFRGREITKIEQGKQVLDSFFE 163 >gi|167522727|ref|XP_001745701.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776050|gb|EDQ89672.1| predicted protein [Monosiga brevicollis MX1] Length = 272 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%) Query: 20 PSVCKILDLRKLRYTIQK------NAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 P VC+++ LR QK N A++ KE++M I HDL +KLK I Sbjct: 119 PPVCRLMTTTHLRERQQKAREAASNKNNAKRPASKFPQKEIQMTAWITEHDLSIKLKQIR 178 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 FL G +V++ +K R + ++ ++++ I++ EI+ ++ PK G Sbjct: 179 KFLTKGNQVRLFIKHRKGQARDKEQQAQVIARIQDEMNEIAALEEAPKSTG 229 >gi|301110044|ref|XP_002904102.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262096228|gb|EEY54280.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 146 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 10/121 (8%) Query: 1 MQMAQEANLDLVEIDS-SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +Q A+ +DLV++ P+VC++ D +K + ++K +A K+QK KEV + Sbjct: 11 IQEARSQGVDLVQVSPVGKLPAVCRLFDSKKRFFELKKANKKASKQQKPKPDKEVVVGAK 70 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS-RIDC 118 I +DL +K++ + FL G KVK+++KF H L + E+ G I RID Sbjct: 71 IAPNDLNMKVEQLKRFLNKGHKVKLTIKF-----AH---AYHLKTQCLEQLGNIGDRIDA 122 Query: 119 E 119 E Sbjct: 123 E 123 >gi|171920582|ref|ZP_02931843.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178757|ref|ZP_02964565.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024254|ref|ZP_02996950.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518492|ref|ZP_03003973.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524041|ref|ZP_03004142.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867715|ref|ZP_03079716.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273346|ref|ZP_03205882.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554380|ref|YP_002284626.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550417|ref|ZP_03771366.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225550991|ref|ZP_03771937.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903286|gb|EDT49575.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209368|gb|EDU06411.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018916|gb|EDU56956.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997946|gb|EDU67043.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659908|gb|EDX53288.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660570|gb|EDX53826.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249866|gb|EDY74646.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541881|gb|ACI60110.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378806|gb|EEH01171.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379571|gb|EEH01933.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 187 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 51 LNLATSKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+V+ + +L D VK ++ RGR Sbjct: 111 GEHDLKVRAENAKRWLEDKDNVKFVIEARGR 141 >gi|167948464|ref|ZP_02535538.1| translation initiation factor IF-3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 51 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 33/49 (67%) Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE H++LG ELL ++ E +++ +P EGRQM+M+L K Sbjct: 1 MRFRGREHAHRELGLELLQRVEADLAEYGQVEQKPAMEGRQMVMVLGPK 49 >gi|170761849|ref|YP_001752310.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920375|ref|ZP_02931704.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508742|ref|ZP_02958218.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701944|ref|ZP_02971585.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168827426|gb|ACA32688.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902807|gb|EDT49096.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675672|gb|EDT87577.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700695|gb|EDU18977.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 187 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 51 LNLAASKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+V+ + +L D VK ++ RGR Sbjct: 111 GEHDLKVRAENAKRWLEDKDNVKFVIEARGR 141 >gi|13357787|ref|NP_078061.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|14194840|sp|Q9PQR4|IF3_UREPA RecName: Full=Translation initiation factor IF-3 gi|11277753|pir||D82914 translation initiation factor IF3 UU227 [imported] - Ureaplasma urealyticum gi|6899197|gb|AAF30636.1|AE002122_5 translation initiation factor IF3 [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 178 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 42 LNLAASKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL+V+ + +L D VK ++ RGR Sbjct: 102 GEHDLKVRAENAKRWLEDKDNVKFVIEARGR 132 >gi|254720892|ref|ZP_05182683.1| translation initiation factor IF-3 [Bacillus anthracis str. A1055] Length = 90 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSP 88 >gi|242084348|ref|XP_002442599.1| hypothetical protein SORBIDRAFT_08g022730 [Sorghum bicolor] gi|241943292|gb|EES16437.1| hypothetical protein SORBIDRAFT_08g022730 [Sorghum bicolor] Length = 502 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 10/137 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI------KEV 54 +Q+A ++DLVE+D + P KI+D K Y ++ V+ R K KS + KEV Sbjct: 101 LQLASRMDMDLVEVDRKLYPPAVKIMDFHKEMYK-KETKVKERLKAKSAIVLRGGENKEV 159 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 + + +L DL VK I + G +VK G E +DLG LS + ++ Sbjct: 160 RFKGKTELKDLMVKADGITRLMERGYRVKCMAMPSGNE--GEDLGTP-LSRLLGLIQDVC 216 Query: 115 RIDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 217 IVESGPHLDSKHAYVIV 233 >gi|304373307|ref|YP_003856516.1| translation initiation factor IF-3 [Mycoplasma hyorhinis HUB-1] gi|304309498|gb|ADM21978.1| translation initiation factor IF-3 [Mycoplasma hyorhinis HUB-1] gi|330723819|gb|AEC46189.1| translation initiation factor IF-3 [Mycoplasma hyorhinis MCLD] Length = 230 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 73/123 (59%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEI---DSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKM 56 ++MA+E LD+V + +SS TP + KILD K +Y +K ++KQ T +E+++ Sbjct: 63 IEMAKEQKLDVVVLSIDNSSGTPRPIAKILDYGKFKYERKKKQKVEKEKQSFTNNREIRL 122 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 I+L+D+++K K FL D +VK++++ RGRE + G+ +L++ + I+++ Sbjct: 123 SFGINLNDIKIKAKKAKEFLLDNDRVKVALRLRGRENTRPEQGKLILNSFFDEVKSIAKL 182 Query: 117 DCE 119 E Sbjct: 183 SKE 185 >gi|254415538|ref|ZP_05029298.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196177719|gb|EDX72723.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 113 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 4/97 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + V K+LD K +Y +K ++ K +KEVK+RP + Sbjct: 19 LQVAKDASLDLVVVSQRKDAPVAKVLDYGKHQYQQKKRQRQSSKPT----LKEVKLRPNV 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD 97 D +++K +L G VK V+ RGRE H+D Sbjct: 75 GDSDYGLRIKRALNWLDKGNLVKFQVRLRGREHQHRD 111 >gi|297744586|emb|CBI37848.3| unnamed protein product [Vitis vinifera] Length = 759 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 12/137 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST------GIKEV 54 ++ A++ LDLVE+ P VCKI+D + +Y Q+ + R K KS KEV Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHREKYK-QQIKEKDRTKSKSELTLRKGDCKEV 170 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 + + DL++K + + G +VK G E QDLG LL+ + ++ Sbjct: 171 RFSGKTEAKDLKMKADMVKRLMDRGYRVKCMA--MGTE--DQDLG-GLLTRLSSLIEDVC 225 Query: 115 RIDCEPKFEGRQMIMIL 131 ++ P+ E RQ +I+ Sbjct: 226 FVESGPRVEKRQAYVIV 242 >gi|332660397|gb|AEE85797.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 253 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 29/128 (22%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLV + P V +++D Y+ ID H Sbjct: 118 AEDAELDLVILSPDADPPVVRMMD-----YSYN-----------------------IDQH 149 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D V+++A FL+DG KVK+ V +GRE +++ ELL + GE+ + + F Sbjct: 150 DYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESK-NFR 208 Query: 124 GRQMIMIL 131 R + ++L Sbjct: 209 DRNLFIVL 216 >gi|296815818|ref|XP_002848246.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238841271|gb|EEQ30933.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 245 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +S P++CKI++ ++++ + ++ K + IK++++ ID HDLQ +L Sbjct: 118 VRAESEGQPAICKIVNKTDYDKSVKERSRASKTKPTTNQIKQIELNWAIDPHDLQHRLSQ 177 Query: 72 IDGFLRDGCKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++ FL G +V I K R + D + LL+ I+++ EI + +P+ Sbjct: 178 LETFLGKGKRVSLILTKKRRKRRATPDEAQRLLAAIEDKLFEIGVTEVKPR 228 >gi|325989680|ref|YP_004249379.1| translation initiation factor IF-3 [Mycoplasma suis KI3806] gi|323574765|emb|CBZ40421.1| Translation initiation factor IF-3 [Mycoplasma suis] Length = 156 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVID 61 A+E LDL+ ++SS++P V K+++ +K ++ KK+K+ G +K + ++ ID Sbjct: 5 AEEKGLDLMLVNSSLSPHVVKLVNYESFIQEKKKQEYQSSKKEKNKGNKMKSIALKLKID 64 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVK 87 HDL+ K+K + +L G +V++ +K Sbjct: 65 SHDLEWKIKKMKEWLEAGDRVQLIIK 90 >gi|116334993|ref|YP_802488.1| translation initiation factor IF-3 [Candidatus Carsonella ruddii PV] gi|116235274|dbj|BAF35122.1| translation initiation factor IF-3 [Candidatus Carsonella ruddii PV] Length = 174 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 49/75 (65%), Gaps = 4/75 (5%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL----SNI 106 IKE++++ ID D ++K+K + FL +G +KI++ F+GREI++++ G EL+ + I Sbjct: 74 IKEIRIKINIDTQDFKLKIKKTNCFLLEGYSIKITIIFKGREIIYKEKGIELILRLQNEI 133 Query: 107 KERFGEISRIDCEPK 121 K + + S I+ + K Sbjct: 134 KGVYFKFSDIELDGK 148 >gi|307104709|gb|EFN52961.1| hypothetical protein CHLNCDRAFT_137349 [Chlorella variabilis] Length = 292 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 6/106 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK----KQKSTGIKEVKM 56 + +A+ LDLV + P V ++++ K+ Y QK A K +Q++ +EV++ Sbjct: 104 INLAKAQGLDLVMVSPRAQPPVARLVEWSKVLYEQQKREKAATKAKLAQQRAAVAREVRI 163 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGREL 102 I HDL VK+ FL DG +++ V F+G + + LGR++ Sbjct: 164 GCQIAEHDLAVKMAQARRFLEDGSPLRLVVTFKGGQQVA--LGRDV 207 >gi|144575193|gb|AAZ44013.2| translation initiation factor IF-3 [Mycoplasma synoviae 53] Length = 139 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 + +ILD K +Y +KN E ++KQ + KE+++ P I DL+ K K +L G + Sbjct: 1 MVRILDYGKFKYISKKNQKEKKEKQSNVQNKEIRLTPFIGKADLETKSKKAREYLLKGDR 60 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEI--SRIDCEPKFEGRQMIMILSSK 134 +K+S+K RGREI ++LG E L + +I S +D + E I +L +K Sbjct: 61 IKVSLKLRGREIARKELGFETLDKFYQTLVDICDSSLDVKNPSERFLNINLLPNK 115 >gi|296454373|ref|YP_003661516.1| initiation factor 3 [Bifidobacterium longum subsp. longum JDM301] gi|296183804|gb|ADH00686.1| initiation factor 3 [Bifidobacterium longum subsp. longum JDM301] Length = 131 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 35/61 (57%) Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 FL G KVK+++ RGREI G ELL + + E ++ +PK EGR +IM L+ K Sbjct: 4 FLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKPKQEGRNIIMTLAPK 63 Query: 135 C 135 Sbjct: 64 G 64 >gi|225428072|ref|XP_002277979.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 687 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 27/150 (18%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--------- 51 ++ A++ LDLVE+ P VCKI+D + +Y K ++ + + KS I Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHREKY---KQQIKEKDRTKSKAIEAYALALLK 168 Query: 52 ----------KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE 101 KEV+ + DL++K + + G +VK G E QDLG Sbjct: 169 SELTLRKGDCKEVRFSGKTEAKDLKMKADMVKRLMDRGYRVKCMA--MGTE--DQDLG-G 223 Query: 102 LLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 LL+ + ++ ++ P+ E RQ +I+ Sbjct: 224 LLTRLSSLIEDVCFVESGPRVEKRQAYVIV 253 >gi|114771884|ref|ZP_01449277.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] gi|114547700|gb|EAU50591.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] Length = 53 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%) Query: 86 VKFRGREIMHQDLGRELLSNIKERF--GEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ+LG ELL ++ E +I+ PK EGRQM M++ Sbjct: 1 MRFRGREMAHQNLGLELLKRVQGVVVEAEAGKIENHPKSEGRQMTMLIGPNT 52 >gi|159473366|ref|XP_001694810.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] gi|158276622|gb|EDP02394.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] Length = 201 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 29/40 (72%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRG 90 KE+++RP I HDL KL+ +G+L DG +V++ V+F+G Sbjct: 85 AKELQLRPRISEHDLATKLRRAEGWLEDGLRVQLVVQFKG 124 >gi|240279351|gb|EER42856.1| translation initiation factor IF3 [Ajellomyces capsulatus H143] gi|325089616|gb|EGC42926.1| translation initiation factor IF3 [Ajellomyces capsulatus H88] Length = 261 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI +L+ +Q A K S +K+V++ ID HDL ++K Sbjct: 133 VAPETAERPAICKITSKGQLQQKLQ--AKSKAPKDPSHSLKQVELNWGIDGHDLTHRMKM 190 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 191 VESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|154281071|ref|XP_001541348.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411527|gb|EDN06915.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 261 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI +L+ +Q A K S +K+V++ ID HDL ++K Sbjct: 133 VAPETAERPAICKITSKGQLQQKLQ--AKSKAPKDPSHSLKQVELNWGIDGHDLTHRMKM 190 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 191 VESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|226312950|ref|YP_002772844.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] gi|226095898|dbj|BAH44340.1| putative translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] Length = 161 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLR-YTIQKNAVEARKKQKSTGIKEVKMRPV 59 +Q+A++ +DLV + + +P C++++ + IQ+NA + RK +K IKE+++ Sbjct: 31 LQLAKDQGVDLVCLSLASSPPPCQLVNRTNYKEQVIQENA-KNRKAEKGVKIKEIRLSAY 89 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGRE 92 I+ HD K + + L G V+++VK +E Sbjct: 90 IEDHDYDTKKRQAERILSSGDAVQLTVKLEKKE 122 >gi|156401073|ref|XP_001639116.1| predicted protein [Nematostella vectensis] gi|156226242|gb|EDO47053.1| predicted protein [Nematostella vectensis] Length = 284 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Query: 1 MQMAQEANLDLVEIDS--SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 +Q A++ L+LVE+ + +VC++ RK Y +K + + K +KE+ + Sbjct: 136 LQAAKDKQLELVELQNQKGTRAAVCRMYS-RKTLYDAEKKHKHSPQGNK---VKELTITG 191 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I DLQ K K I GFL G VK+S+ + + + E++ + + E+ +D Sbjct: 192 HIAPQDLQWKTKKIHGFLEHGFSVKLSISRKPYHKISDEEKLEIVKKVVDGVKEVGVLDG 251 Query: 119 EPKFEG 124 +PK G Sbjct: 252 QPKSVG 257 >gi|225559612|gb|EEH07894.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 261 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI +L+ +Q A K S +K+V++ ID HDL ++K Sbjct: 133 VAPETAERPAICKITSKGQLQQKLQ--AKSKAPKDPSHSLKQVELNWGIDGHDLTHRMKM 190 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 191 VESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|297250595|ref|ZP_06934143.1| translation initiation factor IF-3 [Neisseria polysaccharea ATCC 43768] gi|296838508|gb|EFH22446.1| translation initiation factor IF-3 [Neisseria polysaccharea ATCC 43768] Length = 81 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 7/64 (10%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR------KKQKSTGIKEVKM 56 MA+E N+DLVEI + P VCK++D K +Y K EA+ K +KS ++ V+M Sbjct: 1 MAEEQNVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKTKSRYKSRKSNSVR-VQM 59 Query: 57 RPVI 60 R +I Sbjct: 60 RAII 63 >gi|239613318|gb|EEQ90305.1| translation initiation factor [Ajellomyces dermatitidis ER-3] gi|327351813|gb|EGE80670.1| translation initiation factor [Ajellomyces dermatitidis ATCC 18188] Length = 266 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI L+ +Q A K S +K+V++ ID HDL ++K Sbjct: 138 VAPETAERPAICKITSKGVLQQKLQ--AKSKAPKDPSRALKQVELNWGIDGHDLSHRMKM 195 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ + G KV+ + R + + D REL+ +KE+ E+ ++ + K EG Sbjct: 196 VESYFEKGKKVEFILLQKDKRKKTLPTPDKARELVKTVKEQIAEMGAVETK-KMEG 250 >gi|261187792|ref|XP_002620314.1| translation initiation factor [Ajellomyces dermatitidis SLH14081] gi|239593527|gb|EEQ76108.1| translation initiation factor [Ajellomyces dermatitidis SLH14081] Length = 266 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI L+ +Q A K S +K+V++ ID HDL ++K Sbjct: 138 VAPETAERPAICKITSKGVLQQKLQ--AKSKAPKDPSRALKQVELNWGIDGHDLSHRMKM 195 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ + G KV+ + R + + D REL+ +KE+ E+ ++ + K EG Sbjct: 196 VESYFEKGKKVEFILLQKDKRKKTLPTPDKARELVKTVKEQIAEMGAVETK-KMEG 250 >gi|212276222|ref|NP_001130770.1| hypothetical protein LOC100191874 [Zea mays] gi|194690072|gb|ACF79120.1| unknown [Zea mays] Length = 485 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-----KEVK 55 +Q+A ++DLVE+D P VCKI+D + +Y + E K + + + KEV+ Sbjct: 101 LQLAIRMDMDLVEVDRKSDPPVCKIMDFHREKYKKETKEKERLKTKSAIVLRGGENKEVR 160 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + +L DL VK I + G +VK G E +DLG LS + ++ Sbjct: 161 FKGKTELKDLMVKADGITRLMERGYRVKCMAMPSGNE--GEDLGTP-LSRLLGLIQDVCI 217 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 218 VESGPHLDSKHAYVIV 233 >gi|186685961|ref|YP_001869157.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|186468413|gb|ACC84214.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LELAESLELDLVLVSEGKDVPVAKILNYGKLQYQKKKRQAQSARPV----VKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI 106 + D ++++ +L G VK +V+ RGRE +++ ELL + Sbjct: 74 GVADYKLRIDQAISWLGKGDSVKFAVRLRGREHQYREQAGELLDRV 119 >gi|309801411|ref|ZP_07695538.1| translation initiation factor IF-3, C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308221926|gb|EFO78211.1| translation initiation factor IF-3, C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 120 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 FL G KVK+++ RGRE G ELL + + E ++ PK EGR +IM L+ K Sbjct: 3 FLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAPKQEGRNIIMTLAPK 62 >gi|255545486|ref|XP_002513803.1| translation initiation factor if-3, putative [Ricinus communis] gi|223546889|gb|EEF48386.1| translation initiation factor if-3, putative [Ricinus communis] Length = 572 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 7/89 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST------GIKEV 54 ++ A++ LDLVE+D +V P VCKI+D K +Y Q++ + R K KS KEV Sbjct: 111 LERAKKLKLDLVEVDRNVDPPVCKIMDFNKEKYK-QQSKEKDRVKSKSEVTLRKGDCKEV 169 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVK 83 + + DL++K ++ + G +VK Sbjct: 170 RFSAKTEQKDLKIKADSVIRLMERGYRVK 198 >gi|327299808|ref|XP_003234597.1| translation initiation factor IF-3 [Trichophyton rubrum CBS 118892] gi|326463491|gb|EGD88944.1| translation initiation factor IF-3 [Trichophyton rubrum CBS 118892] Length = 250 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 VCKI+D +++ A K KST IK++++ ID HDLQ +L ++ FL G Sbjct: 129 VCKIVDKSDYSASLKAKARGKESKPKSTAVQIKQIELNWAIDPHDLQHRLDQLETFLSKG 188 Query: 80 CKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +V I K + + D + +L+ I+ + EI + +P+ Sbjct: 189 KRVSLILTKKKRKRRATPDEAQRVLAAIENKLFEIGVTEVKPR 231 >gi|91229884|ref|ZP_01262955.1| translation initiation factor 3 [Vibrio alginolyticus 12G01] gi|91187353|gb|EAS73720.1| translation initiation factor 3 [Vibrio alginolyticus 12G01] Length = 66 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 40/64 (62%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAI 72 L+ + Sbjct: 61 LRNL 64 >gi|226290316|gb|EEH45800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 270 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI L+ +Q A K + +K+V++ ID HDL ++K Sbjct: 142 VAPETAERPAICKITSKGLLQQKLQ--AKSKTPKDPNHALKQVELNWGIDGHDLSHRMKM 199 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ ++ G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 200 VETYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 254 >gi|302842169|ref|XP_002952628.1| hypothetical protein VOLCADRAFT_105608 [Volvox carteri f. nagariensis] gi|300261972|gb|EFJ46181.1| hypothetical protein VOLCADRAFT_105608 [Volvox carteri f. nagariensis] Length = 271 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 44 KKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 + K+ KE+ ++P I HDL KL+ ++G+L DG + K+ V+FR Sbjct: 119 PRPKAEPTKEMHLKPRIAEHDLTYKLRQMEGWLADGIRTKLVVEFR 164 >gi|167948463|ref|ZP_02535537.1| translation initiation factor IF-3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 107 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 47/76 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EA++DLVEI + P VC+++D K + ++K A+KKQK +KEVK RP Sbjct: 19 VADEADMDLVEIVPNAEPPVCRVMDYGKFLFDVKKQKQAAKKKQKQVQVKEVKFRPGTGA 78 Query: 63 HDLQVKLKAIDGFLRD 78 D QVKL+ + FL D Sbjct: 79 GDYQVKLRNLVRFLSD 94 >gi|212538369|ref|XP_002149340.1| translation initiation factor IF3, putative [Penicillium marneffei ATCC 18224] gi|210069082|gb|EEA23173.1| translation initiation factor IF3, putative [Penicillium marneffei ATCC 18224] Length = 243 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%) Query: 15 DSSVTPSVCKILDLRKLRYT--IQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 DSS P VCKI+ L + R ++ AV K T K++++ ID HDL +LK + Sbjct: 119 DSSRVP-VCKIMSLSEFREEERAKERAVRMAKHAAKTSTKQIELNWSIDPHDLSHRLKKL 177 Query: 73 DGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIK 107 GF+ G V+I + + R + I D ++L+ ++ Sbjct: 178 SGFIDKGRTVEIVLTRKRNKRIATADEIKQLMDRLR 213 >gi|242806790|ref|XP_002484818.1| translation initiation factor IF3, putative [Talaromyces stipitatus ATCC 10500] gi|218715443|gb|EED14865.1| translation initiation factor IF3, putative [Talaromyces stipitatus ATCC 10500] Length = 225 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%) Query: 11 LVEIDSSVT--PSVCKILDLRKLR--YTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 LV++D P+VCKI+ L R ++ A K T K++++ ID HDL Sbjct: 94 LVQLDPGGPDRPAVCKIMPLADFRDEERAKEKAARLAKHSAKTSTKQIELNWSIDPHDLS 153 Query: 67 VKLKAIDGFLRDGCKVKISV-KFRGREIMHQD 97 +LK + GF+ G V+I + K RG+ + D Sbjct: 154 HRLKKLSGFIEKGRTVEIILTKKRGKRMATAD 185 >gi|225682868|gb|EEH21152.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 270 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++CKI L+ +Q A K + +K+V++ ID HDL ++K Sbjct: 142 VAPETAERPAICKITSKGLLQQKLQ--AKSKTPKDPNHALKQVELNWGIDGHDLSHRMKM 199 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 + ++ G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 200 VKTYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 254 >gi|223995681|ref|XP_002287514.1| probable mitochondrial translation initiation factor [Thalassiosira pseudonana CCMP1335] gi|220976630|gb|EED94957.1| probable mitochondrial translation initiation factor [Thalassiosira pseudonana CCMP1335] Length = 152 Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 8/100 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG-------IKE 53 + +A + LDL+E+ P V K +D K Y QK K KS G +KE Sbjct: 8 ISIAHKHGLDLMEVTLKSNPPVIKAVDFDKHIYE-QKRKESKLSKDKSKGGAISDKPLKE 66 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREI 93 K R ID HDL+ K + +L G +++++ R R + Sbjct: 67 FKFRAGIDNHDLERKASNMIKYLDKGHAIRVTLTARQRSL 106 >gi|158338503|ref|YP_001519680.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] gi|158308744|gb|ABW30361.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] Length = 104 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 +KEVK+RP + D V++ +L G VK V+ RGRE H+D +LL + + Sbjct: 23 LKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRLRGREHQHRDRATDLLQRVIDDL 82 Query: 111 GEISRIDCEPKFEGRQMIMIL 131 ++ + F+ R +I+ L Sbjct: 83 SKVGEVQI---FDRRALIVQL 100 >gi|257139339|ref|ZP_05587601.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] Length = 45 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 27/40 (67%) Query: 95 HQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 3 HQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPK 42 >gi|315052920|ref|XP_003175834.1| hypothetical protein MGYG_03354 [Arthroderma gypseum CBS 118893] gi|311341149|gb|EFR00352.1| hypothetical protein MGYG_03354 [Arthroderma gypseum CBS 118893] Length = 250 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 +CK+++ + + + A K KST IK++++ ID HDLQ +L+ ++ FL G Sbjct: 129 ICKVVEKSEYIASTKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQHRLEQLETFLSKG 188 Query: 80 CKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +V I K + + D + LL+ I+ + EI + +P+ Sbjct: 189 KRVSLILTKKKRKRRATPDEAQRLLAAIENKLFEIGVTEVKPR 231 >gi|157833955|pdb|1TIF|A Chain A, Translation Initiation Factor 3 N-Terminal Domain Length = 78 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 27/44 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK 44 +++A NLDLV + + P VC+I+D K R+ QK EARK Sbjct: 35 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARK 78 >gi|170695921|ref|ZP_02887061.1| initiation factor 3 [Burkholderia graminis C4D1M] gi|170139219|gb|EDT07407.1| initiation factor 3 [Burkholderia graminis C4D1M] Length = 81 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK 47 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK Sbjct: 20 FRMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQK 66 >gi|321309614|ref|YP_004191943.1| translation initiation factor IF-3 [Mycoplasma haemofelis str. Langford 1] gi|319801458|emb|CBY92104.1| translation initiation factor IF-3 [Mycoplasma haemofelis str. Langford 1] Length = 175 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 7/103 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV I+ + P V KILD K Y ++KN + K I ++P I Sbjct: 44 LALAKQRELDLVLINQN--PGVVKILDYGKYIYELKKNKGGKKNVVKVKSI---TVKPNI 98 Query: 61 DLHDLQVKLK-AIDGFLRDGCKVKISVKFRGREIMHQDLGREL 102 HD++ K K AID F + G KV+ VK GR DL E+ Sbjct: 99 SSHDIEWKAKQAIDWF-KSGDKVQFVVKAPGRMADRVDLVNEV 140 >gi|30693047|ref|NP_174696.2| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|45773942|gb|AAS76775.1| At1g34360 [Arabidopsis thaliana] gi|332193581|gb|AEE31702.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 520 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKI----LDLRKLRYTIQKNAVEARKKQKSTGIKEVKM 56 ++ A+E DLVE+ P VCKI L+L K ++ A R + IKE++ Sbjct: 112 LRRAKELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRF 171 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVK 83 P I+ DL+ K + G +VK Sbjct: 172 TPKIEAKDLKFKSDQALKLMESGYRVK 198 >gi|328853134|gb|EGG02275.1| hypothetical protein MELLADRAFT_66481 [Melampsora larici-populina 98AG31] Length = 223 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 9/123 (7%) Query: 11 LVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLK 70 L+E++ TP +CK+++ L + + ++ KS IKE+++ I+ +DL K + Sbjct: 101 LIEVNGITTPPICKLINRSDL-TPVTRVRRSSKPTHKSLPIKEIQINNQIEPNDLSTKFR 159 Query: 71 AIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 L+ G +++IS+ I DL I+ER EI + + EG+++ M Sbjct: 160 TAIHALQKGHRIRISIILNPNGPINFSDL-------IEERLMEIGAEKIKQEREGKKLFM 212 Query: 130 ILS 132 S Sbjct: 213 DWS 215 >gi|303291139|ref|XP_003064856.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453882|gb|EEH51190.1| predicted protein [Micromonas pusilla CCMP1545] Length = 305 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 4/93 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG----IKEVKM 56 ++ A++ NLDLVE++ TP VC+++ RY ++ EAR++ IK +++ Sbjct: 182 LRRARDLNLDLVEVNPRATPPVCRLMSYDAYRYELKLKDKEARRRGVDRRRQDVIKTLRL 241 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 I +DL+ K F+ G V+ ++F+ Sbjct: 242 SARISDNDLKTKAVQATKFMALGHGVRARIEFK 274 >gi|148233052|ref|NP_001090628.1| mitochondrial translational initiation factor 3 [Xenopus (Silurana) tropicalis] gi|110645372|gb|AAI18769.1| hypothetical protein MGC145704 [Xenopus (Silurana) tropicalis] gi|114107611|gb|AAI22946.1| MGC145669 protein [Xenopus (Silurana) tropicalis] Length = 258 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 14/134 (10%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-STG-----IKEVKMRPV 59 E L LV I + P + K+L ++ I + ++ R+KQK S+G IKE+ Sbjct: 96 EQGLKLVPIRENADPPIYKLLTGKQ----IHEEQLKIREKQKLSSGHGPVQIKELSFSAC 151 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I HDL +K K I ++ V+ISV+ +G D E+L+ I E E + + Sbjct: 152 IAKHDLDIKTKQIIHWIEKKHHVRISVQ-KGSPAGGND-KLEVLNQIAENMSEHATCVVK 209 Query: 120 PKF--EGRQMIMIL 131 PK EGR + +L Sbjct: 210 PKLVKEGRSAVCVL 223 >gi|12323859|gb|AAG51900.1|AC023913_8 transcription factor, putative; 66207-62663 [Arabidopsis thaliana] Length = 574 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKI----LDLRKLRYTIQKNAVEARKKQKSTGIKEVKM 56 ++ A+E DLVE+ P VCKI L+L K ++ A R + IKE++ Sbjct: 140 LRRAKELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRF 199 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVK 83 P I+ DL+ K + G +VK Sbjct: 200 TPKIEAKDLKFKSDQALKLMESGYRVK 226 >gi|255629107|gb|ACU14898.1| unknown [Glycine max] Length = 202 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVE-ARKKQKST---GIKEVKM 56 ++ A+ LDLVE+D + P VCKI+D K Y Q+ E A+ + + T +KEV+ Sbjct: 108 LEHAKTLKLDLVEVDKNAKPPVCKIMDFHKQMYRRQEREKERAKSRAEMTLRKDVKEVRF 167 Query: 57 RPVIDLHDLQVKLKAIDGFLRDG 79 + DL+ K I + G Sbjct: 168 SEKTEAKDLKNKADMIKKLMEKG 190 >gi|295669796|ref|XP_002795446.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285380|gb|EEH40946.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 265 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +++ P++C+I L+ +Q A K + +K+V++ ID HDL ++K Sbjct: 137 VAPETAERPAICRITSKGLLQQKLQ--AKLKTPKDPNHALKQVELNWGIDGHDLSHRMKM 194 Query: 72 IDGFLRDGCKVK---ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 ++ ++ G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 195 VETYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 249 >gi|320591741|gb|EFX04180.1| translation initiation factor [Grosmannia clavigera kw1407] Length = 311 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 6/91 (6%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 +CKI+D R + E R+K+ T KE+++ ID HDL+ ++ + FL G + Sbjct: 187 ICKIVDRVAERKAEYEKTRELRRKK--TLSKELELNWAIDTHDLEHRMGKLREFLERGLR 244 Query: 82 VKISV----KFRGREIMHQDLGRELLSNIKE 108 V++S+ K +GR Q+ ELL ++E Sbjct: 245 VEVSMMRKGKGKGRRHATQEEAAELLRRVRE 275 >gi|223933237|ref|ZP_03625227.1| initiation factor 3 [Streptococcus suis 89/1591] gi|223898051|gb|EEF64422.1| initiation factor 3 [Streptococcus suis 89/1591] Length = 91 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 35/59 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 33 IADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVID 91 >gi|46130882|ref|XP_389172.1| hypothetical protein FG08996.1 [Gibberella zeae PH-1] Length = 306 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 31/45 (68%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 KQ S+ +KE++M ID +DL++K K + GFL G KV++ + F+ Sbjct: 178 KQTSSKMKEIEMSWAIDENDLKIKTKQLIGFLSKGWKVEVIMGFK 222 >gi|328772404|gb|EGF82442.1| hypothetical protein BATDEDRAFT_34432 [Batrachochytrium dendrobatidis JAM81] Length = 165 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 35/154 (22%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTI--QKNAVEARKKQK-------------------- 47 DL+ I+S P VCKI+ + T + +V A K Sbjct: 16 DLILINSKKEPPVCKIVSKNPPKPTPSHESKSVTASKDSSLDATNDTRANALNQPTKKAK 75 Query: 48 ----STGI--KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRG-REIMHQDLGR 100 +GI KE+++ ID HD Q+K+ L G ++K++V RG RE + Sbjct: 76 PTKKRSGIVEKELEINSTIDQHDFQIKMNKGRELLGKGYRLKLTVTERGNRESTN----- 130 Query: 101 ELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++ +I ER E ++ P +++I IL SK Sbjct: 131 -IVQSILERLAEDGKLKNAPTASKKKIIFILDSK 163 >gi|254995450|ref|ZP_05277640.1| translation initiation factor IF-3 [Anaplasma marginale str. Mississippi] Length = 71 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 34/57 (59%) Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ G KVK+S++F GRE+ ++++G +L + ++R + P+ +G M M+ Sbjct: 2 FIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSPRMDGNVMSMVF 58 >gi|309801415|ref|ZP_07695542.1| translation initiation factor IF-3, N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308221930|gb|EFO78215.1| translation initiation factor IF-3, N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 98 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 23/34 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYT 34 + +A+EANLDLVE+ + P V K++D K +Y Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYN 74 >gi|207111306|ref|ZP_03245468.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_CA4C1] Length = 55 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 21/33 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRY 33 + +AQ LDLV I +S P VCK++D K RY Sbjct: 23 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRY 55 >gi|302496869|ref|XP_003010435.1| translation initiation factor IF3, putative [Arthroderma benhamiae CBS 112371] gi|291173978|gb|EFE29795.1| translation initiation factor IF3, putative [Arthroderma benhamiae CBS 112371] Length = 250 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 VCKI+D + + + A K KST IK++++ ID HDLQ +L ++ FL G Sbjct: 129 VCKIVDKSEYSASAKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQHRLDQLETFLSKG 188 Query: 80 CKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +V I K + + D + +L+ I+ + EI + +P+ Sbjct: 189 KRVSLILTKKKRKRRATPDEAQRVLAAIESKLFEIGVTEVKPR 231 >gi|76576277|gb|ABA53851.1| IF3 [Leptospira biflexa serovar Patoc] Length = 68 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 38/58 (65%) Query: 76 LRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 ++ G KVK++++FRGRE++H ++G +++ E E + + P +G+ ++++++ Sbjct: 4 MQKGDKVKVTLRFRGREMVHSEIGMNIVNRFVEDLKEHASPEKMPVHDGKTIVVVMNP 61 >gi|302654213|ref|XP_003018915.1| translation initiation factor IF3, putative [Trichophyton verrucosum HKI 0517] gi|291182603|gb|EFE38270.1| translation initiation factor IF3, putative [Trichophyton verrucosum HKI 0517] Length = 250 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 5/104 (4%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 VCKI+D + + + A K KST IK++++ ID HDLQ +L ++ FL G Sbjct: 129 VCKIVDKSEYSASAKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQHRLDQLETFLSKG 188 Query: 80 CKVK--ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +V ++ K R R D + +L+ I+ + EI + +P+ Sbjct: 189 KRVSLILTKKERKRRAT-PDEAQRVLAAIESKLFEIGVTEVKPR 231 >gi|56417284|ref|YP_154358.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|56388516|gb|AAV87103.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] Length = 85 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 34/57 (59%) Query: 75 FLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ G KVK+S++F GRE+ ++++G +L + ++R + P+ +G M M+ Sbjct: 16 FIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSPRMDGNVMSMVF 72 >gi|255934048|ref|XP_002558305.1| Pc12g15020 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582924|emb|CAP81129.1| Pc12g15020 [Penicillium chrysogenum Wisconsin 54-1255] Length = 229 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 19 TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRD 78 P VCK+ + +++R + A AR + + +K++++ ID HDL +LK + FL Sbjct: 112 NPPVCKLYNKKEVRELEKAKAKSARSSKIT--LKQIELNWAIDAHDLSHRLKQLSTFLEK 169 Query: 79 GCKVKI 84 G +V+I Sbjct: 170 GRRVEI 175 >gi|302790928|ref|XP_002977231.1| hypothetical protein SELMODRAFT_417117 [Selaginella moellendorffii] gi|300155207|gb|EFJ21840.1| hypothetical protein SELMODRAFT_417117 [Selaginella moellendorffii] Length = 270 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 19/146 (13%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTI-------QKNAVEARKKQKSTGIKE 53 + +A++ LDLVE+D S P VCK++D +K +Y +K +E+R + + +KE Sbjct: 98 LGLAEKQGLDLVEVDPSKEPVVCKLMDYKKEKYKEKVREKERKKTNLESR---RLSDLKE 154 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGR--------ELLSN 105 +++ I+ DL++K ++ G ++K VK + + D G +L+ Sbjct: 155 LQVTSKIEERDLEMKADMASKLIQRGHRLKFVVKLPNKPV-KDDEGPVRSDPKALKLIDR 213 Query: 106 IKERFGEISRIDCEPKFEGRQMIMIL 131 + E ++S+++ P+ E + IL Sbjct: 214 LIELLKDVSKLEQGPQSERHRAWAIL 239 >gi|326473659|gb|EGD97668.1| translation initiation factor IF3 [Trichophyton tonsurans CBS 112818] Length = 250 Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 41 EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVK-ISVKFRGREIMHQDLG 99 E++ K + IK++++ ID HDLQ +L ++ FL G +V I K + + D Sbjct: 150 ESKPKSTAVQIKQIELNWAIDPHDLQHRLDQLETFLSKGKRVSLILTKKKRKRRATPDEA 209 Query: 100 RELLSNIKERFGEISRIDCEPK 121 + +L+ I+ + EI + +P+ Sbjct: 210 QRVLAAIENKLFEIGVTEAKPR 231 >gi|307069527|ref|YP_003878004.1| translation initiation factor IF-3 [Candidatus Zinderia insecticola CARI] gi|306482787|gb|ADM89658.1| translation initiation factor IF-3 [Candidatus Zinderia insecticola CARI] Length = 179 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ NLDL+EI +++ S+ + + ++ +K + K+K+ +K++ ++ I Sbjct: 35 LYIAKKKNLDLIEISNNLKGSII-VKMINYKKFIYKKKKKYEKNKKKNLSLKKISLKLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGRE 92 +HD + K+ I FL+ G KVKI + F+GRE Sbjct: 94 AIHDYKFKINNIFIFLKKGHKVKIILNFKGRE 125 >gi|331219120|ref|XP_003322237.1| hypothetical protein PGTG_03774 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301227|gb|EFP77818.1| hypothetical protein PGTG_03774 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 357 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 11 LVEIDSSVTPSVCKILD----LRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 L+E++S P +CKI+ ++K R +++ + R + +KE+++ I+ +DL Sbjct: 225 LIEVNSKTNPPICKIVSREALVQKERTKLKQKKEQQRSNRLENVLKEIQLTWKIERNDLN 284 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERF----GEISRIDCE 119 KLKA KV+I + R + + Q+ ELL+ ++E+ GE+ + + E Sbjct: 285 HKLKAAQQSFEKAYKVRIILNPPSRYQQIDQNHKDELLAIVEEQLTGFGGELVKQESE 342 >gi|330927711|ref|XP_003301970.1| hypothetical protein PTT_13628 [Pyrenophora teres f. teres 0-1] gi|311322927|gb|EFQ89939.1| hypothetical protein PTT_13628 [Pyrenophora teres f. teres 0-1] Length = 286 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%) Query: 20 PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 P C+I+ +LR Q+ RK++K K V++ I DL +L+ + FL+ G Sbjct: 136 PPTCRIMTKIELREQHQRKLELIRKQEKGDSTKTVELNWAIAQGDLGHRLERVRKFLKQG 195 Query: 80 CKVKISVKFRGR 91 KV++++K GR Sbjct: 196 RKVEVTLKAEGR 207 >gi|147855678|emb|CAN79141.1| hypothetical protein VITISV_023967 [Vitis vinifera] Length = 713 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 10/83 (12%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKM-- 56 ++ A++ LDLVE+ P VCKI+D +Y Q+ + R K KST +K V + Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHXEKYK-QQIKEKDRTKSKSTSKIVKVVHLEF 170 Query: 57 -----RPVIDLHDLQVKLKAIDG 74 R + D+ +L ++ + + G Sbjct: 171 LHLMWRVIYDVSELTLRKRRLQG 193 >gi|194295360|gb|ACF40749.1| InfC [Listeria monocytogenes] gi|194295363|gb|ACF40751.1| InfC [Listeria monocytogenes] Length = 71 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 25/37 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQK 37 +Q+A++ANLDLV + + P V +I+D K R+ QK Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQK 71 >gi|326480787|gb|EGE04797.1| translation initiation factor IF3 [Trichophyton equinum CBS 127.97] Length = 250 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 41 EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVK-ISVKFRGREIMHQDLG 99 E++ K + IK++++ ID HDLQ +L ++ FL G +V I K + + D Sbjct: 150 ESKPKSTAVQIKQIELNWAIDPHDLQHRLDQLETFLSKGKRVSLILTKKKRKRRATPDEA 209 Query: 100 RELLSNIKERFGEISRIDCEPK 121 + +L+ I+ + EI + +P+ Sbjct: 210 QRVLAAIENKLFEIGVTEVKPR 231 >gi|308068259|ref|YP_003869864.1| translation initiation factor IF-3 [Paenibacillus polymyxa E681] gi|305857538|gb|ADM69326.1| Translation initiation factor IF-3 [Paenibacillus polymyxa E681] Length = 171 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR----KKQKSTG---IKE 53 + +A+ +DLV +P C ++ K + QK A ++ + K++G +KE Sbjct: 33 LALARSKGVDLVCTSLMSSPPPCSLVAKGKGKALAQKEAAASKTNVGRAAKNSGKEKVKE 92 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRG 90 ++ I+ HD KL+ D LR G V++ VK G Sbjct: 93 LRFTAHIEEHDYDTKLRQADKHLRSGKPVQLVVKASG 129 >gi|258570101|ref|XP_002543854.1| predicted protein [Uncinocarpus reesii 1704] gi|237904124|gb|EEP78525.1| predicted protein [Uncinocarpus reesii 1704] Length = 239 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 7/116 (6%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +L L++ + P++CK+ + LR Q+ R + K+V++ ID HDL Sbjct: 113 SLILLQHPTDDYPAICKVFSKKTLR---QQQYARTRTAKLKLA-KQVELNWAIDPHDLSK 168 Query: 68 KLKAIDGFLRDGCKVK--ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +L ++ FL G K + ++ K R R + G ++L+ I E ++ I +PK Sbjct: 169 RLDQVESFLAKGKKTELVLTPKRRARRATPAE-GEKVLAIISEWIEKVGVIQNKPK 223 >gi|159155471|gb|AAI54974.1| LOC100127256 protein [Xenopus laevis] Length = 246 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 14/139 (10%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK------STGIKEV 54 +++ E L LV I + P + K+L ++ I + ++ R+KQK + IKE+ Sbjct: 79 IRIMDEKGLKLVPIKENADPPIYKLLTGKQ----IHEEQLKLREKQKLSSSHGTVQIKEL 134 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 I HDL +K K I ++ V+ISV+ +G D E+L+ I + E + Sbjct: 135 SFSAGIAKHDLDIKTKQILHWIEKKHHVRISVQ-KGSSAEGND-KLEVLNQITDAVSEHA 192 Query: 115 RIDCEPKF--EGRQMIMIL 131 +PK EGR + +L Sbjct: 193 TCVVKPKLIKEGRSAVCVL 211 >gi|329927874|ref|ZP_08281935.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] gi|328938275|gb|EGG34670.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] Length = 160 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 11/134 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---IKEVKMR 57 + +A+ DLV +P CK++ R ++ AV+A K+Q S G +KE ++ Sbjct: 32 LALAKRHKADLVCTSLFSSPPPCKLVS----RGQAKQEAVKA-KQQVSGGLIKVKEFRLS 86 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I+ HD KL + L G V+ ++ +G+E + R+LL + + E+ + + Sbjct: 87 VHIEDHDYDTKLSQMHKLLAAGKAVQPVIRIQGKE---GEAARKLLERLVQDLAEVGKKE 143 Query: 118 CEPKFEGRQMIMIL 131 + G+Q + L Sbjct: 144 TGIQVSGKQAAVKL 157 >gi|251794459|ref|YP_003009190.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] gi|247542085|gb|ACS99103.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] Length = 162 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 9/112 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK----STGIKEVKM 56 +QMA++ +DLV +P CK++ +R ++ A + ++ +K +KE+++ Sbjct: 32 LQMAKQLKVDLVCESLMSSPPPCKLI----VRGGAKQQASQQKRAEKVKSEPAKVKELRL 87 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGRE-IMHQDLGRELLSNIK 107 I+ HD KL+ L G V++ ++ +G+E ++L +LL+++K Sbjct: 88 SVDIEQHDYDTKLRQAVKLLESGNAVQLVIRIQGKEGARAKELLEQLLADLK 139 >gi|124512278|ref|XP_001349272.1| translation initiation factor IF-3, putative [Plasmodium falciparum 3D7] gi|23499041|emb|CAD51121.1| translation initiation factor IF-3, putative [Plasmodium falciparum 3D7] Length = 165 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 42/77 (54%) Query: 32 RYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 RY +K + + K ++ +K++++ P I ++DL +K+ + FL +VK + +GR Sbjct: 55 RYIQEKKLKQLKHKMENKSVKQLRITPRIGMNDLLIKINSAKQFLLKRHRVKFILTLKGR 114 Query: 92 EIMHQDLGRELLSNIKE 108 E + + + + S I E Sbjct: 115 EYTNVENVKRIFSKISE 131 >gi|126327589|ref|XP_001376085.1| PREDICTED: similar to DC38 [Monodelphis domestica] Length = 275 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---IKEVKMR 57 +++ +E NL LV ++ P V +++ ++ + Q E K Q TG +KE+ Sbjct: 102 IRLMEEQNLRLVLRKANADPPVYQLMTGSQI-HEEQLQIREKEKAQSKTGPPQLKELIFS 160 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K+K I ++ +V+I+VK + + +D EL + I + E++ Sbjct: 161 SNIAQHDLNTKIKQIKQWIEKKYQVQITVK-KDKTADPEDNMEELFNKILKTMPELATFT 219 Query: 118 CEPK 121 +PK Sbjct: 220 SKPK 223 >gi|322820542|gb|EFZ27130.1| putative SMC-domain containing protein [Trypanosoma cruzi] Length = 809 Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 28 LRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 LR+L YT + + VEA + + I E + PV D +L V L+ + + D + K V Sbjct: 454 LRELLYTAKHHLVEANDPEDTPFILEEDLCPVRDTKELAVALRLLKNMIIDFSETKSIVN 513 Query: 88 FRGREIMHQDLGRELLSNIKERFGE 112 R RE+ E L + R GE Sbjct: 514 LRERELSKLRDTNEFL---RRRLGE 535 >gi|85081578|ref|XP_956746.1| hypothetical protein NCU01469 [Neurospora crassa OR74A] gi|28917822|gb|EAA27510.1| predicted protein [Neurospora crassa OR74A] Length = 626 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 VC I+D R +Q A E R+KQ S KE+++ I HDL + + + FLR G + Sbjct: 488 VCVIVDRRAEAAALQAKAKEERRKQVSK--KELEINWAIAAHDLGFRTRQLQNFLRKGHR 545 Query: 82 VKISV----KFRGREIMHQDLGRELLSNIKERFGEISRI 116 V+I + + ++ Q+ +E++ I+E E+ ++ Sbjct: 546 VEIMLLQKKDKKQKKTATQEECQEVVRMIREAVAEVPKV 584 >gi|171692699|ref|XP_001911274.1| hypothetical protein [Podospora anserina S mat+] gi|170946298|emb|CAP73099.1| unnamed protein product [Podospora anserina S mat+] Length = 295 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 29/127 (22%) Query: 8 NLDL--------VEIDSSVTPSVCKILDLRKLRYTIQKNA---VEARKKQKSTGIK---- 52 NLDL E S +C+I+ L+ QK A ++A KK+ G+K Sbjct: 113 NLDLNKSALEQIAEPHSGRPFPICRII----LQGDEQKKAYKQMKAEKKKLQNGVKIVTK 168 Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSN---IKER 109 EV+M + HDL K++ + GFL G +V+++ +MH + +N K+ Sbjct: 169 EVEMNWAMAPHDLATKIRRLKGFLEKGYRVEVT-------MMHPKKKSKRKANDEEAKQV 221 Query: 110 FGEISRI 116 FGE+ ++ Sbjct: 222 FGEVIKV 228 >gi|153870649|ref|ZP_02000005.1| Initiation factor 3 [Beggiatoa sp. PS] gi|152072889|gb|EDN69999.1| Initiation factor 3 [Beggiatoa sp. PS] Length = 52 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 20/33 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRY 33 ++ A E LDLVEI TP VC+I+D K + Sbjct: 20 LEKAHEVELDLVEIVPHATPPVCRIMDYGKFLF 52 >gi|326512346|dbj|BAJ99528.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLR-KLRYTIQKNAVEARKKQ---KSTGIKEVKMRPV 59 AQ LD+V ++ S +P +C+ D R KL V R+K+ K+T +K +K+ P Sbjct: 75 AQSLGLDMVVVNLSSSPVICRASDFRAKLISRFYNEIVLKRQKEWIAKATTVKTLKVSPA 134 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKI 84 ++ ++ +K+K + KV++ Sbjct: 135 LNKDEMGLKIKQLVELSNKNLKVRV 159 >gi|307243348|ref|ZP_07525512.1| putative tetracenomycin polyketide synthesis O-methyltransferase TcmP [Peptostreptococcus stomatis DSM 17678] gi|306493295|gb|EFM65284.1| putative tetracenomycin polyketide synthesis O-methyltransferase TcmP [Peptostreptococcus stomatis DSM 17678] Length = 267 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%) Query: 42 ARKKQKSTGIKEVKMRPVID-----LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMH- 95 A K K TG ++ +M ID H +L ++DGF +D +V +KF R M+ Sbjct: 194 ANKYVKKTGNRDAQMYFAIDNPIEFAHKTHTELISVDGFFKDALRVCKGLKFMTRVYMYF 253 Query: 96 -QDLGRELLSNIK 107 L R L+ ++K Sbjct: 254 ADKLNRTLIMHLK 266 >gi|189207545|ref|XP_001940106.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976199|gb|EDU42825.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 287 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%) Query: 20 PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 P C+I+ +LR Q+ RK++K K +++ I DL +L+ + FL+ G Sbjct: 136 PPTCRIMTKIELREQHQRKLELIRKQEKGDSAKTLEINWAIAKGDLGHRLERVRKFLKQG 195 Query: 80 CKVKISVKFRGR 91 KV++++K GR Sbjct: 196 RKVEVTLKAEGR 207 >gi|284931468|gb|ADC31406.1| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. F] Length = 209 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 55/103 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M+ LD+V I ++ + + K++D K Y ++ +++KKQ +KE+ + + Sbjct: 59 LAMSDSKGLDVVVISNNPSTVIAKLMDYGKHVYEQKRKKRDSKKKQTVVKVKEINFKAGV 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 HD++ + K +L DG VK +++ R I ++L +E+ Sbjct: 119 GDHDIEWRAKKSIEWLNDGFHVKFTIRAFSRMITREELIKEVY 161 >gi|261406395|ref|YP_003242636.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|261282858|gb|ACX64829.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] Length = 160 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---IKEVKMR 57 + +A+ DLV +P CK++ R ++ AV+A K+Q S G +KE ++ Sbjct: 32 LALAKRHKADLVCTSLFSSPPPCKLVS----RGQAKQEAVKA-KQQVSGGPIKVKEFRLS 86 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I+ HD KL + L G V+ ++ +G+E + R+LL + + + + + Sbjct: 87 VHIEEHDYDTKLSQVHKLLAAGKAVQPVIRIQGKE---GEAARKLLERLVQDLAGVGKKE 143 Query: 118 CEPKFEGRQMIMIL 131 + G+Q + L Sbjct: 144 TGIQVSGKQAAVKL 157 >gi|294660393|ref|NP_853139.2| translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(low)] gi|284812051|gb|AAP56707.2| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(low)] gi|284930621|gb|ADC30560.1| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(high)] Length = 209 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 54/103 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M LD+V I ++ + + K++D K Y ++ +++KKQ +KE+ + + Sbjct: 59 LAMGDSKGLDVVVISNNPSTVIAKLMDYGKHVYEQKRKKRDSKKKQTVVKVKEINFKAGV 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 HD++ + K +L DG VK +++ R I ++L +E+ Sbjct: 119 GDHDIEWRAKKSIEWLNDGFHVKFTIRAFSRMITREELIKEVY 161 >gi|162312227|ref|NP_595860.2| mitochondrial translation initiation factor (predicted) [Schizosaccharomyces pombe 972h-] gi|212277754|sp|Q76PC7|IF3M_SCHPO RecName: Full=Probable translation initiation factor, mitochondrial; Flags: Precursor gi|157310420|emb|CAB58168.2| mitochondrial translation initiation factor (predicted) [Schizosaccharomyces pombe] Length = 233 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI-----DLHDLQVKLKAIDGFL 76 +C I+ +L + + R+ +KS + + R V+ D++D++ KLK++ FL Sbjct: 108 ICSIISYTELSKLRENQSSRLREAEKSKHKNKTRTRYVLFSWRTDVNDIERKLKSVKDFL 167 Query: 77 RDGCKVKISVKFRGR-EIMHQDLGRELLSNIK 107 +DG V+I V+ + R + + Q++ +LS I+ Sbjct: 168 QDGNIVEIHVQNKKRSQPVSQEVRDSILSKIQ 199 >gi|322813975|gb|EFZ23491.1| trans-sialidase, putative [Trypanosoma cruzi] Length = 322 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 13/102 (12%) Query: 40 VEARKKQKSTGIK--EVKMRPVI-DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQ 96 VEA+KKQK T K E + +I L D K G DGC V+++ +++M Sbjct: 206 VEAKKKQKETDTKKDEKAVSLIIYTLKDNAASWKLSKGMSADGCSDPSVVEWKDKKLMMM 265 Query: 97 ---DLGR-------ELLSNIKERFGEISRIDCEPKFEGRQMI 128 D GR ++ + E G +SR+ PK EG + + Sbjct: 266 TACDDGRRRVYESVDMGESWTEALGTLSRVWSNPKGEGAKGV 307 >gi|68074933|ref|XP_679383.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500119|emb|CAH97982.1| conserved hypothetical protein [Plasmodium berghei] Length = 162 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 7/83 (8%) Query: 32 RYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 RY +K + + K ++ +K++++ P I +DL +K+ + FL +VK + +GR Sbjct: 56 RYIQEKKMKQLKMKSENKTVKQLRITPRIGANDLLIKINSAKQFLIGRYRVKFILTLKGR 115 Query: 92 EIMHQDLGRELLSNIKERFGEIS 114 E + + N+K+ F +IS Sbjct: 116 EYTN-------IENVKKIFNKIS 131 >gi|113461455|ref|YP_719524.1| preprotein translocase subunit SecF [Haemophilus somnus 129PT] gi|112823498|gb|ABI25587.1| protein translocase subunit secF [Haemophilus somnus 129PT] Length = 313 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 8/78 (10%) Query: 27 DLRKLRYTIQKNAVEARKKQKSTGIKEVKMR-PVIDLH-DLQVKLKAIDGFLRDGCKVKI 84 DL K+R T+++N +E+ Q + G+++V +R PV++ ++ K+K I L +G ++ Sbjct: 64 DLNKVRSTLKENGIESALVQTTGGVRDVMIRLPVVESSAEVGNKIKTILNSLDEGLEIH- 122 Query: 85 SVKFRGREIMHQDLGREL 102 S++F G ++G EL Sbjct: 123 SIEFVG-----PNVGEEL 135 >gi|153873054|ref|ZP_02001765.1| ATPase [Beggiatoa sp. PS] gi|152070479|gb|EDN68234.1| ATPase [Beggiatoa sp. PS] Length = 299 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 71 AIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMI 130 A + LR+G + V++ E H D+ + +L + ER ++ R+D EP +GR ++ Sbjct: 110 AAEHLLREGDNIANVVQYLADE--HPDILQTILQRLAERVPKLERVDSEPTIDGRLALLF 167 >gi|170718438|ref|YP_001783656.1| preprotein translocase subunit SecF [Haemophilus somnus 2336] gi|168826567|gb|ACA31938.1| protein-export membrane protein SecF [Haemophilus somnus 2336] Length = 322 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 8/78 (10%) Query: 27 DLRKLRYTIQKNAVEARKKQKSTGIKEVKMR-PVIDLH-DLQVKLKAIDGFLRDGCKVKI 84 DL K+R T+++N +E+ Q + G+++V +R PV++ ++ K+K I L +G ++ Sbjct: 73 DLNKVRSTLKENGIESALVQTTGGVRDVMIRLPVVESSAEVGNKIKTILNSLDEGLEIH- 131 Query: 85 SVKFRGREIMHQDLGREL 102 S++F G ++G EL Sbjct: 132 SIEFVG-----PNVGEEL 144 >gi|310794415|gb|EFQ29876.1| translation initiation factor IF-3 [Glomerella graminicola M1.001] Length = 276 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVK-ISVKFRGREIMHQDLGRELLSNIKER 109 IKE+++ I HDL K++ + GFL G KV I K RG + D L+ +++ Sbjct: 170 IKELELNWAIASHDLGHKMRQLKGFLEKGYKVDVIFAKKRGSRVATLDEAEALVKAVRDV 229 Query: 110 FGEI 113 E+ Sbjct: 230 VAEV 233 >gi|70995658|ref|XP_752584.1| translation initiation factor IF3 [Aspergillus fumigatus Af293] gi|66850219|gb|EAL90546.1| translation initiation factor IF3, putative [Aspergillus fumigatus Af293] gi|159131339|gb|EDP56452.1| translation initiation factor IF3, putative [Aspergillus fumigatus A1163] Length = 338 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LV++ ++ P +CKI++ +R + A T +K++++ ID HDL + Sbjct: 210 LVQVSPALPGRPPICKIMNKMAMRE--HERAKAKAAHATKTAVKQIELNWAIDSHDLAHR 267 Query: 69 LKAIDGFLRDGCKVKI 84 LK + FL G +V+I Sbjct: 268 LKQLTNFLEKGRRVEI 283 >gi|19309397|emb|CAD27296.1| possible translation initiation factor [Aspergillus fumigatus] gi|41581294|emb|CAE47943.1| translation initiation factor 3, putative [Aspergillus fumigatus] Length = 227 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LV++ ++ P +CKI++ +R + A T +K++++ ID HDL + Sbjct: 99 LVQVSPALPGRPPICKIMNKMAMRE--HERAKAKAAHATKTAVKQIELNWAIDSHDLAHR 156 Query: 69 LKAIDGFLRDGCKVKI 84 LK + FL G +V+I Sbjct: 157 LKQLTNFLEKGRRVEI 172 >gi|326426791|gb|EGD72361.1| hypothetical protein PTSG_00381 [Salpingoeca sp. ATCC 50818] Length = 263 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 23/38 (60%) Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 KEV++ HDLQVK+K FL G +V+I +K R Sbjct: 163 KEVQLSAWCGEHDLQVKVKQAHKFLSKGLRVRIVIKHR 200 >gi|207110661|ref|ZP_03244823.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_CA4C1] Length = 91 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I +D+ K+K F+ VK V +GRE + G ++L ++ +++ + E Sbjct: 26 IAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKE 85 Query: 120 PKFEGR 125 PK EGR Sbjct: 86 PKTEGR 91 >gi|169768786|ref|XP_001818863.1| translation initiation factor IF3 [Aspergillus oryzae RIB40] gi|238498122|ref|XP_002380296.1| translation initiation factor IF3, putative [Aspergillus flavus NRRL3357] gi|83766721|dbj|BAE56861.1| unnamed protein product [Aspergillus oryzae] gi|220693570|gb|EED49915.1| translation initiation factor IF3, putative [Aspergillus flavus NRRL3357] Length = 233 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VCK+++ ++R + A A + S +K++++ ID HDL +LK + FL G Sbjct: 115 PVCKVVNRLEIREQERAKAKAAHVNKNS--LKQIELNWAIDAHDLSHRLKQLTNFLDKGR 172 Query: 81 KVK-ISVKFRGR 91 KV+ I K RG+ Sbjct: 173 KVEVILTKKRGK 184 >gi|150017434|ref|YP_001309688.1| Cof-like hydrolase [Clostridium beijerinckii NCIMB 8052] gi|149903899|gb|ABR34732.1| Cof-like hydrolase [Clostridium beijerinckii NCIMB 8052] Length = 262 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 18/126 (14%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLH 63 E+N+ +ID ++ + YT+ +A A KK + G I R +I + Sbjct: 2 ESNIIFFDIDGTL---------FNEKTYTVPNSAKAALKKAQENGHLIFINTGRTIIGID 52 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK DG++ C ++F+ +EI+H++LG +L KE ++ + + + E Sbjct: 53 DC-VKELNFDGYV---CGCGTYIEFKNKEILHRNLGIDLS---KEIVAKLRKYNIDAILE 105 Query: 124 GRQMIM 129 G+ I Sbjct: 106 GKNDIY 111 >gi|326668271|ref|XP_003198773.1| PREDICTED: translation initiation factor IF-3, mitochondrial [Danio rerio] gi|122890858|emb|CAM14174.1| novel protein [Danio rerio] Length = 280 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-GI---KEVKM 56 +++ + +L LV ++ S P V K++ ++ I + ++ R+KQK G+ KE+ Sbjct: 111 IRLLDQTDLKLVAVNDSRDPPVYKLMKGKE----IHEEQLKLREKQKDKKGVVQSKELNF 166 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 I LHDL KL+ I +L VK++++ Sbjct: 167 SSDISLHDLDNKLRQIVSWLEKNNHVKLTIR 197 Searching..................................................done Results from round 2 >gi|260426749|ref|ZP_05780728.1| translation initiation factor IF-3 [Citreicella sp. SE45] gi|260421241|gb|EEX14492.1| translation initiation factor IF-3 [Citreicella sp. SE45] Length = 235 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 67/133 (50%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + P VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 100 MELAEQAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEIKFRPGT 159 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 160 DTHDYDVKMRNVLKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDVKELGKVENMP 219 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 220 KMEGRQMIMMIGP 232 >gi|85702892|ref|ZP_01033996.1| translation initiation factor [Roseovarius sp. 217] gi|85671820|gb|EAQ26677.1| translation initiation factor [Roseovarius sp. 217] Length = 219 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI S TP VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 84 LEMAEEAGLDLVEISPSATPPVCKIMDFGKYKYEQQKREAEARKKQKVIEVKEIKFRPGT 143 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL+ G KVKI+++FRGRE+ HQDLGR+LL I E ++ RI+ P Sbjct: 144 DTHDYDVKMRSVVKFLQGGDKVKITLRFRGREMAHQDLGRQLLERIAEDIKDVGRIENMP 203 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 204 KMEGRQMIMVIGP 216 >gi|260575175|ref|ZP_05843175.1| translation initiation factor IF-3 [Rhodobacter sp. SW2] gi|259022435|gb|EEW25731.1| translation initiation factor IF-3 [Rhodobacter sp. SW2] Length = 226 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 62/129 (48%), Positives = 86/129 (66%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EA LDLVEI + P VCKI+D K +Y QK EARKKQ KE+K RP D HD Sbjct: 98 EAGLDLVEISPNAEPPVCKIMDFGKYKYEQQKREAEARKKQHIIETKEIKFRPGTDTHDY 157 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + GE +++ P+ EGR Sbjct: 158 DVKMRSVLKFLEEGDKVKVTLRFRGREMAHQELGLELLNRVAADVGEAGKVESMPRLEGR 217 Query: 126 QMIMILSSK 134 QM+M++ K Sbjct: 218 QMVMMIGPK 226 >gi|254488522|ref|ZP_05101727.1| translation initiation factor IF-3 [Roseobacter sp. GAI101] gi|214045391|gb|EEB86029.1| translation initiation factor IF-3 [Roseobacter sp. GAI101] Length = 228 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA++A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 92 MEMAEDAGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 151 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++ + FL +G KVKI+++FRGRE+ HQ+LGR+LL + E E+ R++ P Sbjct: 152 DTNDYQVKMRNVFKFLDNGDKVKITLRFRGREMAHQNLGRQLLERVAEDTKEVGRVENFP 211 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 212 KMEGRQMVMLIGP 224 >gi|149202824|ref|ZP_01879796.1| translation initiation factor IF-3 [Roseovarius sp. TM1035] gi|149144106|gb|EDM32140.1| translation initiation factor IF-3 [Roseovarius sp. TM1035] Length = 209 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI S TP VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 74 LEMAEEAGLDLVEISPSATPPVCKIMDFGKYKYEQQKREAEARKKQHIIEIKEIKFRPGT 133 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL+ G KVKI+++FRGRE+ HQDLGR+LL I + E+ R++ P Sbjct: 134 DTHDYDVKMRSVVKFLQGGDKVKITLRFRGREMAHQDLGRQLLERIADDIKEVGRVENMP 193 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 194 KMEGRQMIMVIGP 206 >gi|159043698|ref|YP_001532492.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12] gi|157911458|gb|ABV92891.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12] Length = 202 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 67 MRMAEEAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKTIDVKEVKFRPNT 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QVK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 127 DTHDYQVKMRNVFKFLEGGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEIGKVENMP 186 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 187 KMEGRQMVMMIGP 199 >gi|56421253|ref|YP_148571.1| translation initiation factor IF-3 [Geobacillus kaustophilus HTA426] gi|56381095|dbj|BAD77003.1| translation initiation factor IF-3 [Geobacillus kaustophilus HTA426] Length = 239 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 102 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 161 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 162 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAP 221 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 222 KMDGRNMFLVLAPK 235 >gi|114707132|ref|ZP_01440030.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506] gi|114537328|gb|EAU40454.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506] Length = 217 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 73/135 (54%), Positives = 101/135 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++A LDLVEI + P VCKILDL KL+Y QK A EARK+QK+ +KEVKMRP I Sbjct: 83 LTLAEDAGLDLVEIVPNANPPVCKILDLGKLKYENQKKAAEARKRQKTIEVKEVKMRPNI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+KA+ F DG KVK++++FRGRE+ HQ+LG LL+ ++E EIS+++ EP Sbjct: 143 DDHDYETKMKAVRRFFDDGDKVKVTLRFRGREMAHQELGMRLLNRVREETNEISKVEAEP 202 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ + Sbjct: 203 KLEGRQMMMVLAPRS 217 >gi|126740453|ref|ZP_01756141.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6] gi|126718589|gb|EBA15303.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6] Length = 200 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 64 MDLANEAGLDLVEISPNAKPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 124 DTHDYEVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKEIGKVENMP 183 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 184 KMEGRQMIMMIGP 196 >gi|146276385|ref|YP_001166544.1| translation initiation factor IF-3 [Rhodobacter sphaeroides ATCC 17025] gi|145554626|gb|ABP69239.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides ATCC 17025] Length = 194 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 59 MSMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + + E+ +++ Sbjct: 119 DTHDFDVKMRSVLKFLGEGDKVKVTLRFRGREMAHQELGLELLNRVAAQVSEAEVGKVEA 178 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 179 MPKLEGRQMVMMIAPK 194 >gi|251795320|ref|YP_003010051.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] gi|247542946|gb|ACS99964.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] Length = 193 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA + +LDLV + + P VC+I+D K RY QK EARK QK +KEV R I Sbjct: 57 MQMAIDLSLDLVNVAPTAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDLKEVWFRANI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + + FL +G KVK SV+FRGREI H +G+++L + + EI ++ P Sbjct: 117 DEHDYQTKFRNVVKFLGEGDKVKASVRFRGREIAHAAIGQKILDRLAQEVAEICSVERAP 176 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 177 KLEGRSMIMILAPKS 191 >gi|83943233|ref|ZP_00955693.1| translation initiation factor [Sulfitobacter sp. EE-36] gi|83954368|ref|ZP_00963088.1| translation initiation factor [Sulfitobacter sp. NAS-14.1] gi|83841405|gb|EAP80575.1| translation initiation factor [Sulfitobacter sp. NAS-14.1] gi|83846241|gb|EAP84118.1| translation initiation factor [Sulfitobacter sp. EE-36] Length = 201 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 65 MEMAVDAGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ R++ P Sbjct: 125 DTNDYDVKMRNVFKFLDNGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEVGRVENFP 184 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 185 KMEGRQMVMLIGP 197 >gi|261418267|ref|YP_003251949.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61] gi|297529121|ref|YP_003670396.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3] gi|319767773|ref|YP_004133274.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52] gi|261374724|gb|ACX77467.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61] gi|297252373|gb|ADI25819.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3] gi|317112639|gb|ADU95131.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52] Length = 202 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 65 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 125 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAP 184 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 185 KMDGRNMFLVLAPK 198 >gi|15615702|ref|NP_244006.1| translation initiation factor IF-3 [Bacillus halodurans C-125] gi|10175762|dbj|BAB06859.1| translation initiation factor IF-3 [Bacillus halodurans C-125] Length = 190 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ NLDLV + + P VC+I+D K RY QK EARKKQK+ +KEV++ P I Sbjct: 54 LDMARNVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKDKEARKKQKTINVKEVRLSPTI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GR +L + + +I+ ++ +P Sbjct: 114 EDHDFNTKLRNARKFLSKGDKVKAAIRFRGRAITHSEIGRNVLERLAKECEDIAIVEAKP 173 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 174 KMEGRSMFLVLAPKT 188 >gi|320529199|ref|ZP_08030291.1| translation initiation factor IF-3 [Selenomonas artemidis F0399] gi|320138829|gb|EFW30719.1| translation initiation factor IF-3 [Selenomonas artemidis F0399] Length = 214 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 67/135 (49%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 57 LRMAEEQHLDLVEVAPNARPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 117 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERMGDLVSIERGA 176 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 177 KLEGKNMTMILSPKA 191 >gi|77462485|ref|YP_351989.1| translation initiation factor IF-3 [Rhodobacter sphaeroides 2.4.1] gi|126461362|ref|YP_001042476.1| translation initiation factor IF-3 [Rhodobacter sphaeroides ATCC 17029] gi|77386903|gb|ABA78088.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides 2.4.1] gi|126103026|gb|ABN75704.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter sphaeroides ATCC 17029] Length = 194 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 59 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 119 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 178 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 179 MPKLEGRQMVMMIAPK 194 >gi|152976958|ref|YP_001376475.1| translation initiation factor IF-3 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025710|gb|ABS23480.1| translation initiation factor IF-3 [Bacillus cytotoxicus NVH 391-98] Length = 195 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 59 LDMAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+ I+ +P Sbjct: 119 DEHDFNTKLRNALKFLGKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACAEVGTIESKP 178 Query: 121 KFEGRQMIMILSSK 134 K EGR M +IL+ K Sbjct: 179 KMEGRSMFLILAPK 192 >gi|42783752|ref|NP_980999.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987] gi|49187466|ref|YP_030718.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne] gi|49481334|ref|YP_038621.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140934|ref|YP_085896.1| translation initiation factor IF-3 [Bacillus cereus E33L] gi|118479723|ref|YP_896874.1| translation initiation factor IF-3 [Bacillus thuringiensis str. Al Hakam] gi|170708689|ref|ZP_02899127.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389] gi|177653087|ref|ZP_02935374.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174] gi|222098037|ref|YP_002532094.1| translation initiation factor if-3 [Bacillus cereus Q1] gi|225866552|ref|YP_002751930.1| translation initiation factor IF-3 [Bacillus cereus 03BB102] gi|229602129|ref|YP_002868854.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248] gi|254736683|ref|ZP_05194389.1| translation initiation factor IF-3 [Bacillus anthracis str. Western North America USA6153] gi|254741721|ref|ZP_05199408.1| translation initiation factor IF-3 [Bacillus anthracis str. Kruger B] gi|301056081|ref|YP_003794292.1| translation initiation factor IF-3 [Bacillus anthracis CI] gi|42739682|gb|AAS43607.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987] gi|49181393|gb|AAT56769.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne] gi|49332890|gb|AAT63536.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974403|gb|AAU15953.1| translation initiation factor IF-3 [Bacillus cereus E33L] gi|118418948|gb|ABK87367.1| bacterial translation initiation factor 3 (bIF-3) [Bacillus thuringiensis str. Al Hakam] gi|170126369|gb|EDS95258.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389] gi|172081611|gb|EDT66682.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174] gi|221242095|gb|ACM14805.1| translation initiation factor IF-3 [Bacillus cereus Q1] gi|225789540|gb|ACO29757.1| translation initiation factor IF-3 [Bacillus cereus 03BB102] gi|229266537|gb|ACQ48174.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248] gi|300378250|gb|ADK07154.1| translation initiation factor IF-3 [Bacillus cereus biovar anthracis str. CI] gi|324328468|gb|ADY23728.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 195 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 59 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 119 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 178 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 179 KMEGRSMFLVLAPK 192 >gi|258654266|ref|YP_003203422.1| translation initiation factor IF-3 [Nakamurella multipartita DSM 44233] gi|258557491|gb|ACV80433.1| translation initiation factor IF-3 [Nakamurella multipartita DSM 44233] Length = 227 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA+LDLVE+ P VCK++D K +Y + A EAR+ Q T IKE+K+RP I Sbjct: 80 LRMAQEADLDLVEVAPDARPPVCKLMDYGKFKYESAQKAREARRNQVLTVIKEMKLRPKI 139 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + E+ ++ P Sbjct: 140 DSHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGFRLLQRLSADVAELGFVESAP 199 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 200 KQDGRNMIMVLAP 212 >gi|288959314|ref|YP_003449655.1| translation initiation factor IF-3 [Azospirillum sp. B510] gi|288911622|dbj|BAI73111.1| translation initiation factor IF-3 [Azospirillum sp. B510] Length = 187 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 65/131 (49%), Positives = 93/131 (70%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A LDLVE+ P VCKILD K +Y QK A EARKKQK +KE+K+RP ID + Sbjct: 57 AEDAGLDLVEVAPQAEPPVCKILDYGKFKYEAQKKANEARKKQKIIEVKEIKLRPNIDDN 116 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A FL +G KVK++++FRGRE+ HQDLG +L +++ E+++++ PK E Sbjct: 117 DYDVKMRAARRFLEEGDKVKVTMRFRGREMAHQDLGMNVLVRVRDALDELAKVEQMPKLE 176 Query: 124 GRQMIMILSSK 134 GRQMIM+L+ + Sbjct: 177 GRQMIMVLAPR 187 >gi|52786765|ref|YP_092594.1| translation initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|52349267|gb|AAU41901.1| InfC [Bacillus licheniformis ATCC 14580] Length = 211 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 75 LEIAGRANLDLVLVAANAKPPVCRIMDYGKYRFEQQKKEKEARKNQKIINLKEVRLSPGI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL+ G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 135 EEHDFNTKLRNAIKFLQKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 194 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 195 KMDGRSMFLVLAPKT 209 >gi|148655186|ref|YP_001275391.1| translation initiation factor IF-3 [Roseiflexus sp. RS-1] gi|148567296|gb|ABQ89441.1| bacterial translation initiation factor 3 (bIF-3) [Roseiflexus sp. RS-1] Length = 238 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVE+ + P VC+ILD K RY K EARK QK +K++++ P Sbjct: 62 LSMAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVEVKQIRLEPKT 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+VK K FL +G KVK +++FRGREI HQ++G E+L + E +IS ++ P Sbjct: 122 DDHDLEVKAKQARRFLLEGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDISVVEQRP 181 Query: 121 KFEGRQMIMILSS 133 EGR + ++L+ Sbjct: 182 TMEGRVLTLLLAP 194 >gi|126726282|ref|ZP_01742123.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2150] gi|126704145|gb|EBA03237.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2150] Length = 171 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 36 MEQAEQAGLDLVEISPNANPPVCKIMDFGKYKYEQQKRESEARKKQKIIEIKEIKFRPNT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E+ +I+ P Sbjct: 96 DKHDYGVKMRNVFKFLENGDKVKITMRFRGREMAHQNLGRELLERVAADVVELGKIENMP 155 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 156 KMEGRQMIMMIGP 168 >gi|229543584|ref|ZP_04432644.1| translation initiation factor IF-3 [Bacillus coagulans 36D1] gi|229328004|gb|EEN93679.1| translation initiation factor IF-3 [Bacillus coagulans 36D1] Length = 213 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P V +I+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 76 LEIAARANLDLVLVAPNAKPPVARIMDYGKYRFEMQKKDREARKKQKIINVKEVRLSPTI 135 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+D+G+ +L E E++ ++ +P Sbjct: 136 EEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKDIGQRVLDRFAEACAEVATVESKP 195 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 196 KMDGRSMFLVLAPKT 210 >gi|149913793|ref|ZP_01902325.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b] gi|149812077|gb|EDM71908.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b] Length = 136 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MEMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVKI+++FRGRE+ HQDLGR+LL + E ++ +++ P Sbjct: 61 DTHDYDVKMRNVFRFLENGDKVKITLRFRGREMAHQDLGRDLLHRVAEDVKDLGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMVIGP 133 >gi|308068135|ref|YP_003869740.1| translation initiation factor IF-3 [Paenibacillus polymyxa E681] gi|305857414|gb|ADM69202.1| Translation initiation factor IF-3 [Paenibacillus polymyxa E681] Length = 165 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA +ANLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDANLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRSNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + + FL +G KVK SV+FRGREI H ++G+++L +K ++ ++ +P Sbjct: 90 EEHDYQTKFRNVVKFLNEGDKVKCSVRFRGREITHANVGQKILERVKLEVADLCTVERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKS 164 >gi|90420462|ref|ZP_01228369.1| translation initiation factor IF-3 [Aurantimonas manganoxydans SI85-9A1] gi|90335190|gb|EAS48943.1| translation initiation factor IF-3 [Aurantimonas manganoxydans SI85-9A1] Length = 189 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 70/134 (52%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VCKILDL KL+Y QK + EAR++QK+ +KE+KMRP I Sbjct: 55 LAMAEEAGLDLVEIVPTANPPVCKILDLGKLKYETQKKSAEARRRQKTIEVKEIKMRPNI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K++ F +G KVK++++FRGRE+ HQ+LG LL+ ++E GEI++++ EP Sbjct: 115 DEHDYETKMKSVRRFFDEGDKVKVTLRFRGREMAHQELGMRLLNRVREETGEIAKVEAEP 174 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 175 KLEGRQMMMVLAPR 188 >gi|163845977|ref|YP_001634021.1| translation initiation factor IF-3 [Chloroflexus aurantiacus J-10-fl] gi|222523703|ref|YP_002568173.1| translation initiation factor IF-3 [Chloroflexus sp. Y-400-fl] gi|163667266|gb|ABY33632.1| translation initiation factor IF-3 [Chloroflexus aurantiacus J-10-fl] gi|222447582|gb|ACM51848.1| translation initiation factor IF-3 [Chloroflexus sp. Y-400-fl] Length = 275 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E DLVE+ + P VC++LD K RY K EAR+ QK + +K++++ P Sbjct: 49 LAMAEERGFDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARRNQKQSELKQIRLMPKT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+ VK FL G KVK +++FRGRE+ H ++GR++L I E+ +I+ I+ +P Sbjct: 109 DDHDVAVKANQARRFLLAGDKVKFNLRFRGREMAHPEIGRQMLDQIAEQLSDIAVIEQKP 168 Query: 121 KFEGRQMIMILSS 133 EGR + M+L+ Sbjct: 169 LMEGRVLSMLLAP 181 >gi|182679072|ref|YP_001833218.1| translation initiation factor IF-3 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634955|gb|ACB95729.1| translation initiation factor IF-3 [Beijerinckia indica subsp. indica ATCC 9039] Length = 219 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 71/134 (52%), Positives = 94/134 (70%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVEI + TP VCKILD K R+ QK A EARKKQK IKE+K+RP ID Sbjct: 86 RLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQKKAAEARKKQKIVEIKEIKLRPGID 145 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+KA+ F +G KVK++++FRGRE+ HQDLG LL +K G ++++ EP Sbjct: 146 EHDYDTKMKAVKRFFEEGDKVKVTLRFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPS 205 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ + Sbjct: 206 MEGRQMIMVLAPRT 219 >gi|167771640|ref|ZP_02443693.1| hypothetical protein ANACOL_03012 [Anaerotruncus colihominis DSM 17241] gi|167666280|gb|EDS10410.1| hypothetical protein ANACOL_03012 [Anaerotruncus colihominis DSM 17241] Length = 232 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 MA E N+DLV+I TP VCKI+D K ++ K EARK QK IKE+++ ID Sbjct: 88 NMAIEKNMDLVKIAPQATPPVCKIMDYGKFKFEQAKREKEARKNQKVIEIKEIRLSLNID 147 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D K+ FL G KVK +++FRGRE+ H +LG ++ E E ++ PK Sbjct: 148 TNDFNTKVNRAIKFLEGGDKVKAALRFRGREMAHPELGTNIMKRFTEAVAEYGNVEKLPK 207 Query: 122 FEGRQMIMILSSKCV 136 EGR M+M +S K V Sbjct: 208 MEGRSMVMFISPKPV 222 >gi|310640924|ref|YP_003945682.1| translation initiation factor if-3 [Paenibacillus polymyxa SC2] gi|309245874|gb|ADO55441.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] Length = 165 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA +ANLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDANLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRSNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + + FL +G KVK SV+FRGREI H ++G+++L +K ++ ++ +P Sbjct: 90 EEHDYQTKFRNVVKFLNEGDKVKCSVRFRGREITHANVGQKILERVKTEVADLCTVERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKS 164 >gi|332967751|gb|EGK06857.1| translation initiation factor IF3 [Desmospora sp. 8437] Length = 166 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLV + P VC+I+D K RY K EARK QK+ IKE++ P I Sbjct: 29 LRLAREADLDLVNVAPKAKPPVCRIMDYGKYRYEQSKREKEARKNQKTIQIKEIRFSPSI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ KL+ + FL +G KVK++++FRGREI HQD+GR +L+ + E EI ++ P Sbjct: 89 EEHDVNTKLRNVKKFLSNGDKVKLTIRFRGREITHQDIGRRILNRMAEEVKEIGDVERYP 148 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMILS K Sbjct: 149 KMEGRHMIMILSPKK 163 >gi|296129471|ref|YP_003636721.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM 20109] gi|296021286|gb|ADG74522.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM 20109] Length = 415 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ + P VCKI+D K +Y A EAR+ Q +T +KE++ R I Sbjct: 107 LRLAQDADLDLVEVAPTARPPVCKIMDFGKFKYEADMKAREARRNQANTILKEIRFRLKI 166 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + E+ I+ P Sbjct: 167 DPHDYGTKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGVRLLQRLAADVAELGFIESMP 226 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 227 KQDGRNMIMVLGP 239 >gi|3122257|sp|O33567|IF3_RHOS4 RecName: Full=Translation initiation factor IF-3 gi|2370447|emb|CAA75028.1| translation initiation factor 3 [Rhodobacter sphaeroides] Length = 181 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 46 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 106 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 165 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 166 MPKLEGRQMVMMIAPK 181 >gi|120404302|ref|YP_954131.1| translation initiation factor IF-3 [Mycobacterium vanbaalenii PYR-1] gi|119957120|gb|ABM14125.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium vanbaalenii PYR-1] Length = 243 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 75 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E I+ Sbjct: 135 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSA 194 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 195 KQDGRNMTMVLAP 207 >gi|89067761|ref|ZP_01155215.1| translation initiation factor [Oceanicola granulosus HTCC2516] gi|89046731|gb|EAR52786.1| translation initiation factor [Oceanicola granulosus HTCC2516] Length = 136 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 67/133 (50%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A LDLVEI + +P VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 1 MQLAEDAGLDLVEISPNASPPVCKIMDFGKFKYEQQKRESEARKKQKTIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL G KVK++++FRGRE+ HQDLGR LL + + EI +++ P Sbjct: 61 DTHDYDVKMRNVFKFLESGDKVKVTLRFRGREMAHQDLGRRLLERVADDVQEIGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGP 133 >gi|30264645|ref|NP_847022.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames] gi|47778330|ref|YP_021465.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames Ancestor'] gi|65321943|ref|ZP_00394902.1| COG0290: Translation initiation factor 3 (IF-3) [Bacillus anthracis str. A2012] gi|30259320|gb|AAP28508.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames] gi|47552035|gb|AAT33940.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames Ancestor'] Length = 186 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 50 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 110 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 170 KMEGRSMFLVLAPK 183 >gi|152967113|ref|YP_001362897.1| translation initiation factor IF-3 [Kineococcus radiotolerans SRS30216] gi|151361630|gb|ABS04633.1| translation initiation factor IF-3 [Kineococcus radiotolerans SRS30216] Length = 277 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVE+ + P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 82 LRLADEAGLDLVEVAPTARPPVCKLMDFGKFKYESDMKAREARKNQSNTILKEIRFRLKI 141 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + E ++ ++ P Sbjct: 142 DPHDYATKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGFRLLQRLAEDVSDLGGVESSP 201 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 202 RQDGRNMVMVIGP 214 >gi|83590593|ref|YP_430602.1| translation initiation factor 3 [Moorella thermoacetica ATCC 39073] gi|83573507|gb|ABC20059.1| bacterial translation initiation factor 3 (bIF-3) [Moorella thermoacetica ATCC 39073] Length = 154 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +DLVE+ + P VC+I+D K +Y K EARKKQ+ IKEVK+R I Sbjct: 20 LRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKREREARKKQRIINIKEVKLRLNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK + FL+DG KVK+++ FRGREI H DLG +L + ++ +++ I+ P Sbjct: 80 EEHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLKLCQRVADQVADLASIEKPP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MIL+ K Sbjct: 140 KVEGRNMTMILAPKS 154 >gi|110633028|ref|YP_673236.1| translation initiation factor IF-3 [Mesorhizobium sp. BNC1] gi|110284012|gb|ABG62071.1| bacterial translation initiation factor 3 (bIF-3) [Chelativorans sp. BNC1] Length = 192 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P VCKI DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 59 LRIAEEAGLDLVEVSPNADPPVCKITDLGKLKYQSQKKAAEARKKQKTIEIKEIKMRPNI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VK++++ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EP Sbjct: 119 DIHDYEVKMRSVRRFFEEGDKVKLTLRFRGREMAHLELGMKLLNRVREDVEGIAKVEAEP 178 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 179 KLEGRQMMMVLAPK 192 >gi|163731400|ref|ZP_02138847.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149] gi|161394854|gb|EDQ19176.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149] Length = 164 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 29 MEMANDAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E R++ P Sbjct: 89 DTNDYDVKMRNVFKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEAGRVENFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 149 KMEGRQMVMLIGP 161 >gi|317121665|ref|YP_004101668.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter marianensis DSM 12885] gi|315591645|gb|ADU50941.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter marianensis DSM 12885] Length = 196 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E NLDLVE+ P VC+I+D K +Y K EAR++QK IKEVKMRP I Sbjct: 29 LRMAYERNLDLVEVAPQARPPVCRIMDYGKYKYEQAKRDREARRRQKIVDIKEVKMRPRI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL+ FL DG KVK ++ FRGREI+H DLGR++L + + +I+ ++ P Sbjct: 89 DQHDFEVKLRNARRFLEDGDKVKATIMFRGREIVHADLGRQVLERLAKAVEDIATVERRP 148 Query: 121 KFEGRQMIMILSSK 134 EGR M M+L+ + Sbjct: 149 VVEGRNMTMVLAPR 162 >gi|110680169|ref|YP_683176.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh 114] gi|109456285|gb|ABG32490.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh 114] Length = 164 Score = 210 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 29 MEMAMDAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E R++ P Sbjct: 89 DTNDYDVKMRNVFRFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKEAGRVENFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 149 KMEGRQMVMLIGP 161 >gi|160934430|ref|ZP_02081817.1| hypothetical protein CLOLEP_03303 [Clostridium leptum DSM 753] gi|156867103|gb|EDO60475.1| hypothetical protein CLOLEP_03303 [Clostridium leptum DSM 753] Length = 203 Score = 210 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E NLDLV+I P VCKI+D K R+ K EARK Q IKE+++ I Sbjct: 67 LDKAAEKNLDLVKISPMAKPPVCKIMDYGKYRFEQAKREKEARKNQHIVDIKEIRLSLNI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL F+ +G KVK+S++FRGRE+ H +LG E++ + E + I+ Sbjct: 127 DTHDFNTKLGHAKRFISEGDKVKVSIRFRGREMGHPELGYEIMRKFADSCAEFANIEKPA 186 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 187 KLEGRNMLMFLAPK 200 >gi|84502675|ref|ZP_01000794.1| translation initiation factor [Oceanicola batsensis HTCC2597] gi|84389070|gb|EAQ01868.1| translation initiation factor [Oceanicola batsensis HTCC2597] Length = 164 Score = 210 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A++A LDLVEI + TP VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 29 MALAEQAELDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKTIEVKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +++ P Sbjct: 89 DTHDYDVKMRNVVKFLEKGDKVKVTLRFRGREMAHQNLGRELLERVAEDVREIGKVENMP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 149 KMEGRQMIMMIGP 161 >gi|289704523|ref|ZP_06500958.1| translation initiation factor IF-3 [Micrococcus luteus SK58] gi|289558781|gb|EFD52037.1| translation initiation factor IF-3 [Micrococcus luteus SK58] Length = 408 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCK++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 112 LRLAAEADLDLVEVAPTAKPPVCKLMDFGKYKYEAAVKARESRKNQVNTVLKEVRFRLKI 171 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE +LG +LL E E+ ++ +P Sbjct: 172 DKHDYETKTGHAKKFLSQGDKVKAIIQFRGREQQRPELGIKLLQQFAEDVAELGTVESQP 231 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+++ Sbjct: 232 RQDGRNMVMVVAP 244 >gi|167461622|ref|ZP_02326711.1| translation initiation factor IF-3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383962|ref|ZP_08057692.1| translation initiation factor IF-3-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151439|gb|EFX44626.1| translation initiation factor IF-3-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 166 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A +ANLDLV + + P VC+I+D K RY +QK EARK QK +KE+++ I Sbjct: 30 LQIAADANLDLVNVAPTAKPPVCRIMDYGKYRYEMQKKEKEARKNQKVVDLKEIRLSASI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL+DG KVK SV+FRGREI H ++G+++L + EI+ ++ P Sbjct: 90 DEHDFQTKLRNAIKFLKDGDKVKASVRFRGREIAHSEIGKKVLERMAAETAEIASVERAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|99081604|ref|YP_613758.1| translation initiation factor 3 [Ruegeria sp. TM1040] gi|99037884|gb|ABF64496.1| bacterial translation initiation factor 3 (bIF-3) [Ruegeria sp. TM1040] Length = 137 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DTHDYDVKMRNVIKFLENGDKVKVTLRFRGREMAHQNLGRELLQRVAEDIKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|254475440|ref|ZP_05088826.1| translation initiation factor IF-3 [Ruegeria sp. R11] gi|214029683|gb|EEB70518.1| translation initiation factor IF-3 [Ruegeria sp. R11] Length = 144 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQLAEEAGLDLVEISPNANPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QVK+K + FL +G KVK++++FRGRE+ HQ+LGR+LL + E E+ +++ P Sbjct: 68 DTHDYQVKMKNVFKFLENGDKVKVTLRFRGREMAHQNLGRDLLLRVAEDIKELGKVENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 128 KMEGRQMIMMIAP 140 >gi|295696883|ref|YP_003590121.1| translation initiation factor IF-3 [Bacillus tusciae DSM 2912] gi|295412485|gb|ADG06977.1| translation initiation factor IF-3 [Bacillus tusciae DSM 2912] Length = 174 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E NLDLV + + P VC+I+D K +Y K EAR+ QK +KEV++ P I Sbjct: 37 LRIAAEKNLDLVNVAPTAKPPVCRIMDYGKYKYEQSKRDKEARRNQKIVSLKEVRLTPNI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+A+ FL G KVK +V+FRGREI H +G+ +L + + + ++ P Sbjct: 97 EDHDFQTKLRAVVRFLEQGDKVKATVRFRGREITHTRIGQGILERMAKEVENLCVVERPP 156 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 157 KLEGRNMIMILAPK 170 >gi|313884895|ref|ZP_07818647.1| translation initiation factor IF-3 [Eremococcus coleocola ACS-139-V-Col8] gi|312619586|gb|EFR31023.1| translation initiation factor IF-3 [Eremococcus coleocola ACS-139-V-Col8] Length = 175 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLV + + P V +I+D K R+ +QK E RK QK +KE+++ P I Sbjct: 40 LTIAESFELDLVLVSPNAQPPVARIMDYGKYRFELQKKEKEQRKNQKVVNVKEIRLSPSI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL G KVK+S++FRGR I H+DLGR++L + E E++ ++ +P Sbjct: 100 EEHDYQTKLRQAIKFLEKGDKVKVSIRFRGRAITHKDLGRDVLEDFIEDTAEVATVESKP 159 Query: 121 KFEGRQMIMILSS 133 K EGR M MIL+ Sbjct: 160 KMEGRSMFMILAP 172 >gi|163737358|ref|ZP_02144775.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis BS107] gi|161388884|gb|EDQ13236.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis BS107] Length = 144 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQMAEEAGLDLVEISPNATPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 68 DTHDYEVKMRNVYKFLENGDKVKITLRFRGREMAHQNLGRELLLRVAEDIKELGKVENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 128 KMEGRQMIMMIGP 140 >gi|163740975|ref|ZP_02148368.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10] gi|161385966|gb|EDQ10342.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10] Length = 137 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 72/133 (54%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNATPPVCKIMDYGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DTHDYEVKMRNVYKFLENGDKVKITLRFRGREMAHQNLGRELLLRVAEDIKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|259416882|ref|ZP_05740802.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B] gi|259348321|gb|EEW60098.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B] Length = 143 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 71/133 (53%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 7 MQMAEEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 67 DTHDYDVKMRNVIKFLENGDKVKVTLRFRGREMAHQNLGRELLQRVAEDIKELGKVENMP 126 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 127 KMEGRQMIMMIGP 139 >gi|240168026|ref|ZP_04746685.1| translation initiation factor IF-3 [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 59 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 119 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETAP 178 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 179 KQDGRNMTMVLAP 191 >gi|317507013|ref|ZP_07964780.1| translation initiation factor IF-3 [Segniliparus rugosus ATCC BAA-974] gi|316254697|gb|EFV14000.1| translation initiation factor IF-3 [Segniliparus rugosus ATCC BAA-974] Length = 224 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP I Sbjct: 45 LRLAIEADLDLVEVAPDARPPVCKIMDYGKFRYEAAQKARESRKHQQNTVIKEQKLRPKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 105 DDHDYETKKGHVVRFLDSGAKVKVTIMFRGREQSRPELGHRLLQRLGADVSEHGFVETVP 164 Query: 121 KFEGRQMIMILSS 133 + +GR M MIL+ Sbjct: 165 RLDGRNMTMILAP 177 >gi|313902056|ref|ZP_07835469.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter subterraneus DSM 13965] gi|313467665|gb|EFR63166.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter subterraneus DSM 13965] Length = 194 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E N+DLVE+ P VC+I+D K +Y K EARK+QK IKEVKMRP I Sbjct: 29 LRMAYERNMDLVEVAPQARPPVCRIMDYGKFKYEQAKRDREARKRQKIVDIKEVKMRPRI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL+ FL DG KVK ++ FRGREI+H DLGR++L + +I+ I+ P Sbjct: 89 DQHDFEVKLRNARRFLEDGDKVKATIMFRGREIVHADLGRQVLERLARAVEDIATIERRP 148 Query: 121 KFEGRQMIMILSSK 134 EGR M M+L+ + Sbjct: 149 VVEGRNMTMVLAPR 162 >gi|83952033|ref|ZP_00960765.1| translation initiation factor [Roseovarius nubinhibens ISM] gi|83837039|gb|EAP76336.1| translation initiation factor [Roseovarius nubinhibens ISM] Length = 136 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KE+K RP Sbjct: 1 MEMAEEAGLDLVEISPNANPPVCKIMDFGKYKYEQQKRESEARKKQKVIEVKEIKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVKI+++FRGRE+ HQDLGR+LL + + +++ P Sbjct: 61 DTHDYEVKMRSVMKFLENGDKVKITMRFRGREMAHQDLGRQLLQRVSGDIEGVGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIMI++ Sbjct: 121 KMEGRQMIMIIAP 133 >gi|212638371|ref|YP_002314891.1| translation initiation factor 3 [Anoxybacillus flavithermus WK1] gi|212559851|gb|ACJ32906.1| Translation initiation factor 3 (IF-3) [Anoxybacillus flavithermus WK1] Length = 180 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KE+++ P I Sbjct: 44 LEIAARLNLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEIRLSPTI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I ++ P Sbjct: 104 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFAEACADIGTVETAP 163 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 164 KMDGRSMFLVLAPK 177 >gi|52081389|ref|YP_080180.1| translation initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|319647297|ref|ZP_08001519.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2] gi|52004600|gb|AAU24542.1| initiation factor IF-3 [Bacillus licheniformis ATCC 14580] gi|317390644|gb|EFV71449.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2] Length = 186 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 50 LEIAGRANLDLVLVAANAKPPVCRIMDYGKYRFEQQKKEKEARKNQKIINLKEVRLSPGI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL+ G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 110 EEHDFNTKLRNAIKFLQKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 169 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 170 KMDGRSMFLVLAPKT 184 >gi|260887110|ref|ZP_05898373.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|330839117|ref|YP_004413697.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|260863172|gb|EEX77672.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] gi|329746881|gb|AEC00238.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC 35185] Length = 193 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK IKEVK+RP I Sbjct: 53 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKYRYEQQKREKEAKKKQKIVTIKEVKLRPNI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL +G KVK+++ FRGRE+ H +LGRE+L+ + +R E+ I+ + Sbjct: 113 EQHDFDVKLKNALRFLEEGNKVKVTIMFRGRELSHPELGREVLNKVADRLKELVSIERDA 172 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MIL+ K Sbjct: 173 KLEGKNMTMILAPKA 187 >gi|294084801|ref|YP_003551561.1| initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322] gi|292664376|gb|ADE39477.1| Initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322] Length = 171 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ +V P VCKILD K +Y QK A E RKKQK +KE+K+RP I Sbjct: 38 INKAEDFGLDLVEVQPNVDPPVCKILDYGKYKYEAQKRANETRKKQKIIEVKEIKLRPNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QVK++A++ FL G KVK++++FRGRE+ HQ+LG +L +++ ++++++ P Sbjct: 98 DEHDYQVKMRAVNKFLGSGDKVKVTLRFRGREMAHQELGANVLKRVRDETEDVAKVESHP 157 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+++ K Sbjct: 158 KMEGRQMIMVIAPK 171 >gi|294677127|ref|YP_003577742.1| translation initiation factor IF [Rhodobacter capsulatus SB 1003] gi|294475947|gb|ADE85335.1| translation initiation factor IF-3 [Rhodobacter capsulatus SB 1003] Length = 141 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 8 MQMAEEAGLDLVEISPTAVPPVCKIMDFGKFKYEQQKKEAEARKKQKVIEIKEIKFRPGT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVK++++FRGRE+ HQ LG ELL+ + G+ +++ P Sbjct: 68 DTHDYEVKMRSVMKFLEEGDKVKVTLRFRGREMAHQQLGMELLNRVVGDVGDAGKVESMP 127 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 128 KLEGRQMVMMIAPK 141 >gi|206969668|ref|ZP_03230622.1| translation initiation factor IF-3 [Bacillus cereus AH1134] gi|218235389|ref|YP_002369370.1| translation initiation factor IF-3 [Bacillus cereus B4264] gi|218899728|ref|YP_002448139.1| translation initiation factor IF-3 [Bacillus cereus G9842] gi|228903092|ref|ZP_04067228.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 4222] gi|296505047|ref|YP_003666747.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171] gi|206735356|gb|EDZ52524.1| translation initiation factor IF-3 [Bacillus cereus AH1134] gi|218163346|gb|ACK63338.1| translation initiation factor IF-3 [Bacillus cereus B4264] gi|218545941|gb|ACK98335.1| translation initiation factor IF-3 [Bacillus cereus G9842] gi|228856501|gb|EEN01025.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 4222] gi|296326099|gb|ADH09027.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171] gi|326942358|gb|AEA18254.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar chinensis CT-43] Length = 166 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTVESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|239827996|ref|YP_002950620.1| translation initiation factor IF-3 [Geobacillus sp. WCH70] gi|239808289|gb|ACS25354.1| translation initiation factor IF-3 [Geobacillus sp. WCH70] Length = 190 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 54 LEIAARLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ P Sbjct: 114 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLERFSEACSDIAVVETAP 173 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 174 KMDGRNMFLVLAPK 187 >gi|156741418|ref|YP_001431547.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM 13941] gi|156232746|gb|ABU57529.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM 13941] Length = 225 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVE+ + P VC+ILD K RY K EARK QK +K++++ P Sbjct: 49 LLMAEERGLDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQVDVKQIRLEPKT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL VK K FL DG KVK +++FRGREI HQ++G E+L + E ++S ++ P Sbjct: 109 DEHDLDVKAKQARRFLLDGDKVKFNLRFRGREIFHQEIGLEMLERMAEELRDVSVVEQRP 168 Query: 121 KFEGRQMIMILSS 133 EGR + ++L+ Sbjct: 169 TMEGRVLTLLLAP 181 >gi|317129890|ref|YP_004096172.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM 2522] gi|315474838|gb|ADU31441.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM 2522] Length = 166 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ ANLDLV + + P VC+I+D K RY QK EARK QK KEV++ P I Sbjct: 30 LEMAQNANLDLVMVAPNAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIINTKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H +G+ +L + +I+ ++ +P Sbjct: 90 EEHDFNTKLRNARKFLTKGDKVKAAIRFRGRAITHSQIGKVVLEKLASECEDIATVEQKP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR M +ILS K Sbjct: 150 KMEGRSMFLILSPKA 164 >gi|283458461|ref|YP_003363087.1| translation initiation factor 3 [Rothia mucilaginosa DY-18] gi|283134502|dbj|BAI65267.1| translation initiation factor 3 [Rothia mucilaginosa DY-18] Length = 258 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 77 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAIKARESRKKQANAVLKEIRFRLKI 136 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E+S ++ P Sbjct: 137 DTHDYETKVGHARRFLSGGDKVKAMIQFRGREQQRPEMGVRLLERLAAELAEVSTVESRP 196 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 197 RQDGRNMVMVLAP 209 >gi|84687222|ref|ZP_01015103.1| translation initiation factor [Maritimibacter alkaliphilus HTCC2654] gi|84664810|gb|EAQ11293.1| translation initiation factor [Rhodobacterales bacterium HTCC2654] Length = 164 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + TP VCKI+D K +Y QK EARKKQK+ +KEVK RP Sbjct: 29 MELAEQAGLDLVEISPNATPPVCKIMDFGKFKYETQKREAEARKKQKTIEVKEVKFRPNT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VK+K + FL G KVK++++FRGRE+ HQ+LGR+LL + E EI +++ P Sbjct: 89 DVHDYDVKMKNVVKFLEKGDKVKVTLRFRGREMAHQNLGRDLLERVAEDVKEIGKVENMP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 149 KMEGRQMIMMIGP 161 >gi|229175284|ref|ZP_04302799.1| Translation initiation factor IF-3 [Bacillus cereus MM3] gi|228608116|gb|EEK65423.1| Translation initiation factor IF-3 [Bacillus cereus MM3] Length = 186 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 50 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 110 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 170 KMEGRSMFLVLAPK 183 >gi|51892229|ref|YP_074920.1| translation initiation factor IF-3 [Symbiobacterium thermophilum IAM 14863] gi|51855918|dbj|BAD40076.1| translation initiation factor IF-3 [Symbiobacterium thermophilum IAM 14863] Length = 199 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE LDLVE+ + P VCK++D + +Y K EARKKQK IKEVKMRP ID Sbjct: 53 RIAQERGLDLVEVAPNAKPPVCKLMDYGRYKYEQAKREREARKKQKVITIKEVKMRPNID 112 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD V+ + + FLRDG KVK ++ FRGRE++H LG+E+L + E +I ++ P+ Sbjct: 113 DHDFAVRQRQAESFLRDGDKVKATIMFRGREVVHAQLGKEVLDRLLETVKDICVVERPPR 172 Query: 122 FEGRQMIMILSSKC 135 EGR MIMIL+ K Sbjct: 173 LEGRNMIMILAPKA 186 >gi|159901151|ref|YP_001547398.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus ATCC 23779] gi|159894190|gb|ABX07270.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus ATCC 23779] Length = 219 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +LDLVE+ + +P VC+++D K RY K EARK QK +KE++M+P Sbjct: 47 LDMAHDRDLDLVEVAPNASPPVCRLMDYGKYRYEQTKKEREARKNQKQVELKEIRMQPRT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQVK+ FL +G KVK SV+FRGREI H ++GRE+L I E + ++ +P Sbjct: 107 DTHDLQVKVNNARRFLEEGHKVKFSVRFRGREITHPEIGREMLEQIAEDLRDHGVLEQKP 166 Query: 121 KFEGRQMIMILSS 133 EGR +I++ Sbjct: 167 TLEGRAYSLIMAP 179 >gi|14194834|sp|Q9K867|IF3_BACHD RecName: Full=Translation initiation factor IF-3 Length = 171 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ NLDLV + + P VC+I+D K RY QK EARKKQK+ +KEV++ P I Sbjct: 35 LDMARNVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKDKEARKKQKTINVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GR +L + + +I+ ++ +P Sbjct: 95 EDHDFNTKLRNARKFLSKGDKVKAAIRFRGRAITHSEIGRNVLERLAKECEDIAIVEAKP 154 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 155 KMEGRSMFLVLAPKT 169 >gi|165871448|ref|ZP_02216095.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488] gi|196042362|ref|ZP_03109632.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99] gi|196047724|ref|ZP_03114926.1| translation initiation factor IF-3 [Bacillus cereus 03BB108] gi|217962054|ref|YP_002340624.1| translation initiation factor IF-3 [Bacillus cereus AH187] gi|218905802|ref|YP_002453636.1| translation initiation factor IF-3 [Bacillus cereus AH820] gi|254686932|ref|ZP_05150790.1| translation initiation factor IF-3 [Bacillus anthracis str. CNEVA-9066] gi|254724496|ref|ZP_05186279.1| translation initiation factor IF-3 [Bacillus anthracis str. A1055] gi|254754682|ref|ZP_05206717.1| translation initiation factor IF-3 [Bacillus anthracis str. Vollum] gi|254757514|ref|ZP_05209541.1| translation initiation factor IF-3 [Bacillus anthracis str. Australia 94] gi|164712745|gb|EDR18275.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488] gi|196021445|gb|EDX60150.1| translation initiation factor IF-3 [Bacillus cereus 03BB108] gi|196026806|gb|EDX65443.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99] gi|217065168|gb|ACJ79418.1| translation initiation factor IF-3 [Bacillus cereus AH187] gi|218536199|gb|ACK88597.1| translation initiation factor IF-3 [Bacillus cereus AH820] Length = 166 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|291443486|ref|ZP_06582876.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] gi|291346433|gb|EFE73337.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] Length = 255 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 71 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 130 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 131 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 190 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 191 KQDGRNMIMVLGP 203 >gi|30022650|ref|NP_834281.1| translation initiation factor IF-3 [Bacillus cereus ATCC 14579] gi|228910398|ref|ZP_04074213.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200] gi|228923318|ref|ZP_04086606.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228941753|ref|ZP_04104300.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954843|ref|ZP_04116863.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960843|ref|ZP_04122478.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228967671|ref|ZP_04128692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228974677|ref|ZP_04135243.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981271|ref|ZP_04141571.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407] gi|229048282|ref|ZP_04193850.1| Translation initiation factor IF-3 [Bacillus cereus AH676] gi|229072076|ref|ZP_04205285.1| Translation initiation factor IF-3 [Bacillus cereus F65185] gi|229081827|ref|ZP_04214319.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2] gi|229112039|ref|ZP_04241582.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15] gi|229129858|ref|ZP_04258824.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4] gi|229147133|ref|ZP_04275492.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24] gi|229152769|ref|ZP_04280952.1| Translation initiation factor IF-3 [Bacillus cereus m1550] gi|229180893|ref|ZP_04308228.1| Translation initiation factor IF-3 [Bacillus cereus 172560W] gi|229192775|ref|ZP_04319733.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876] gi|38372267|sp|Q812P6|IF3_BACCR RecName: Full=Translation initiation factor IF-3 gi|29898208|gb|AAP11482.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bacillus cereus ATCC 14579] gi|228590614|gb|EEK48475.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876] gi|228602450|gb|EEK59936.1| Translation initiation factor IF-3 [Bacillus cereus 172560W] gi|228630589|gb|EEK87235.1| Translation initiation factor IF-3 [Bacillus cereus m1550] gi|228636382|gb|EEK92853.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24] gi|228653549|gb|EEL09421.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4] gi|228671362|gb|EEL26663.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15] gi|228701415|gb|EEL53909.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2] gi|228711010|gb|EEL62976.1| Translation initiation factor IF-3 [Bacillus cereus F65185] gi|228723007|gb|EEL74384.1| Translation initiation factor IF-3 [Bacillus cereus AH676] gi|228778471|gb|EEM26738.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407] gi|228785080|gb|EEM33093.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792047|gb|EEM39628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228798865|gb|EEM45844.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804832|gb|EEM51431.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228817965|gb|EEM64043.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228836272|gb|EEM81625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849164|gb|EEM94003.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200] Length = 167 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTVESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|163746608|ref|ZP_02153966.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45] gi|161380493|gb|EDQ04904.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45] Length = 137 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MEMAEEAGLDLVEISPNAKPPVCKIMDFGKFKYEQQKRESEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL G KVKI+++FRGRE+ HQ+LGRELL + +I R++ P Sbjct: 61 DTNDYDVKMRNVFKFLEGGDKVKITLRFRGREMAHQNLGRELLERVAADTKDIGRVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMVIGP 133 >gi|260892436|ref|YP_003238533.1| translation initiation factor IF-3 [Ammonifex degensii KC4] gi|260864577|gb|ACX51683.1| translation initiation factor IF-3 [Ammonifex degensii KC4] Length = 165 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ P VCKI+D K +Y + K EARKKQ+ +KEVK+RP I Sbjct: 20 LRIAEERGLDLVEVAPQARPPVCKIMDYGKYKYEMSKRDREARKKQRLVTVKEVKLRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK + + FL+DG KVK+++ FRGREI+H LG LL +KE + ++ P Sbjct: 80 EEHDFQVKARNVIRFLKDGDKVKVTIMFRGREIIHPQLGERLLERLKEEVAAVGVVERAP 139 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 140 KLEGRNMVMILAPK 153 >gi|296164540|ref|ZP_06847111.1| translation initiation factor IF3 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900140|gb|EFG79575.1| translation initiation factor IF3 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 213 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 47 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 107 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 166 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 167 KQDGRNMTMVLAP 179 >gi|261408924|ref|YP_003245165.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|329922246|ref|ZP_08277948.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] gi|261285387|gb|ACX67358.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|328942283|gb|EGG38553.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] Length = 164 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDLNLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL+DG KVK SV+FRGREI H ++G+++L +K ++ I+ +P Sbjct: 90 EEHDYQTKLRNVVKFLKDGDKVKCSVRFRGREITHANIGQKILERVKTEVADLCVIERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKA 164 >gi|284048034|ref|YP_003398373.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM 20731] gi|283952255|gb|ADB47058.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM 20731] Length = 177 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI P VC+I+D K Y QK EARK+Q++ +KEVK+R I Sbjct: 41 LHLAEEKHLDLVEIAPKAKPPVCRIMDYGKYLYEQQKREKEARKRQRTIDVKEVKLRIRI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK K FL+ G KVK+++ FRGRE+ H +LG +LL+ + ++ EI+ ++ +P Sbjct: 101 EDHDFEVKTKNAIRFLQGGDKVKVTIMFRGREMTHPELGEQLLNRMADQLQEIATVERKP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMI++ K Sbjct: 161 KLEGRNMIMIVAPKS 175 >gi|227817359|ref|YP_002817368.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC 684] gi|228917214|ref|ZP_04080771.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929622|ref|ZP_04092640.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935882|ref|ZP_04098692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948300|ref|ZP_04110583.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987822|ref|ZP_04147931.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228993302|ref|ZP_04153218.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM 12442] gi|228999355|ref|ZP_04158934.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17] gi|229006910|ref|ZP_04164540.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4] gi|229019799|ref|ZP_04176602.1| Translation initiation factor IF-3 [Bacillus cereus AH1273] gi|229032220|ref|ZP_04188193.1| Translation initiation factor IF-3 [Bacillus cereus AH1271] gi|229076077|ref|ZP_04209045.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18] gi|229087131|ref|ZP_04219281.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44] gi|229093672|ref|ZP_04224772.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42] gi|229099036|ref|ZP_04229970.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29] gi|229105202|ref|ZP_04235851.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28] gi|229118066|ref|ZP_04247425.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3] gi|229124141|ref|ZP_04253333.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201] gi|229141300|ref|ZP_04269838.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26] gi|229158178|ref|ZP_04286245.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342] gi|229163566|ref|ZP_04291516.1| Translation initiation factor IF-3 [Bacillus cereus R309803] gi|229186831|ref|ZP_04313986.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1] gi|229198723|ref|ZP_04325421.1| Translation initiation factor IF-3 [Bacillus cereus m1293] gi|38372270|sp|Q81L15|IF3_BACAN RecName: Full=Translation initiation factor IF-3 gi|61213087|sp|Q633M1|IF3_BACCZ RecName: Full=Translation initiation factor IF-3 gi|61213121|sp|Q72ZG2|IF3_BACC1 RecName: Full=Translation initiation factor IF-3 gi|227003475|gb|ACP13218.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC 684] gi|228584745|gb|EEK42865.1| Translation initiation factor IF-3 [Bacillus cereus m1293] gi|228596568|gb|EEK54233.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1] gi|228619948|gb|EEK76824.1| Translation initiation factor IF-3 [Bacillus cereus R309803] gi|228625136|gb|EEK81896.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342] gi|228642081|gb|EEK98374.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26] gi|228659443|gb|EEL15091.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201] gi|228665289|gb|EEL20772.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3] gi|228678128|gb|EEL32356.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28] gi|228684264|gb|EEL38208.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29] gi|228689759|gb|EEL43566.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42] gi|228696199|gb|EEL49034.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44] gi|228706940|gb|EEL59145.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18] gi|228729000|gb|EEL80003.1| Translation initiation factor IF-3 [Bacillus cereus AH1271] gi|228741524|gb|EEL91721.1| Translation initiation factor IF-3 [Bacillus cereus AH1273] gi|228754310|gb|EEM03725.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4] gi|228760300|gb|EEM09267.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17] gi|228766370|gb|EEM15013.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM 12442] gi|228771870|gb|EEM20327.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228811287|gb|EEM57625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823650|gb|EEM69472.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830009|gb|EEM75628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842415|gb|EEM87506.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 167 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|254510306|ref|ZP_05122373.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium KLH11] gi|221534017|gb|EEE37005.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium KLH11] Length = 137 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA + LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MQMAADVGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E ++ +I+ P Sbjct: 61 DTHDYDVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKDLGKIENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|154250663|ref|YP_001411487.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans DS-1] gi|171769438|sp|A7HPJ7|IF3_PARL1 RecName: Full=Translation initiation factor IF-3 gi|154154613|gb|ABS61830.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans DS-1] Length = 173 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 99/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVE+ + P VCK+LD K +Y QK A EARKKQK+ +KE+KMRP I Sbjct: 40 IRMAEEAGLDLVEVSPNAKPPVCKLLDYGKFKYQAQKKANEARKKQKTVEVKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++A+ F +G KVK++++FRGRE+ HQ+LG LL+ +KE I++++ P Sbjct: 100 DTHDYEVKMRAMLRFFEEGDKVKVTLRFRGREMAHQELGMVLLNKVKEEVEPIAKVELYP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIM+L+ K Sbjct: 160 RLEGRQMIMVLAPK 173 >gi|327439266|dbj|BAK15631.1| translation initiation factor 3 [Solibacillus silvestris StLB046] Length = 213 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + P V +++D K ++ QK E RK K +KEV++ P I Sbjct: 77 LEIAARANLDLVLVAPQAKPPVARVMDYGKFKFDQQKKDREIRKNSKVIVMKEVRLSPTI 136 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 137 DEHDFQTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKP 196 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L K Sbjct: 197 KMEGRSMFLVLQPKT 211 >gi|239905698|ref|YP_002952437.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1] gi|239795562|dbj|BAH74551.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1] Length = 185 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP Sbjct: 44 LRMAQEKGLDLVEVAPNAEPPVCRIMDFGRFKYQQQKKLQEARKKATTVQLKEIKVRPKT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I F+ +G + K++V FRGREI+H+D G +L+ + GE+ +++ EP Sbjct: 104 DEHDYQTKLKHIRRFIEEGDRCKVTVFFRGREIVHKDRGLTILTRVVADLGELIKVEQEP 163 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 164 RTEGRMMTMLLAP 176 >gi|260546221|ref|ZP_05821961.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038] gi|260563021|ref|ZP_05833507.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|260567412|ref|ZP_05837882.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40] gi|260755791|ref|ZP_05868139.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|260759014|ref|ZP_05871362.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|260760739|ref|ZP_05873082.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|260884815|ref|ZP_05896429.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|261215066|ref|ZP_05929347.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|261217936|ref|ZP_05932217.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|261221165|ref|ZP_05935446.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|261314848|ref|ZP_05954045.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|261316593|ref|ZP_05955790.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|261321214|ref|ZP_05960411.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|261324056|ref|ZP_05963253.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|261751258|ref|ZP_05994967.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|261755823|ref|ZP_05999532.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|261759051|ref|ZP_06002760.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|265983114|ref|ZP_06095849.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|265992140|ref|ZP_06104697.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|265993878|ref|ZP_06106435.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|265997125|ref|ZP_06109682.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|265999247|ref|ZP_06111613.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str. 63/9] gi|294851343|ref|ZP_06792016.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026] gi|297247343|ref|ZP_06931061.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str. B3196] gi|260096328|gb|EEW80204.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038] gi|260153037|gb|EEW88129.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|260156930|gb|EEW92010.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40] gi|260669332|gb|EEX56272.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|260671171|gb|EEX57992.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|260675899|gb|EEX62720.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|260874343|gb|EEX81412.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|260916673|gb|EEX83534.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|260919749|gb|EEX86402.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|260923025|gb|EEX89593.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|261293904|gb|EEX97400.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|261295816|gb|EEX99312.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|261300036|gb|EEY03533.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|261303874|gb|EEY07371.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|261739035|gb|EEY27031.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|261741011|gb|EEY28937.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|261745576|gb|EEY33502.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|262551593|gb|EEZ07583.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|262764859|gb|EEZ10780.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|263003206|gb|EEZ15499.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|263092845|gb|EEZ17020.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str. 63/9] gi|264661706|gb|EEZ31967.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|294819932|gb|EFG36931.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026] gi|297174512|gb|EFH33859.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str. B3196] Length = 196 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 63 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 123 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 182 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 183 KLEGRQMMMVLAPR 196 >gi|300744014|ref|ZP_07073034.1| translation initiation factor IF-3 [Rothia dentocariosa M567] gi|300380375|gb|EFJ76938.1| translation initiation factor IF-3 [Rothia dentocariosa M567] Length = 246 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 65 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAVKARESRKKQVNAVLKEIRFRLKI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E E+S I+ P Sbjct: 125 DTHDYETKVGHARRFLTGGDKVKAMIQFRGREQQRPEMGVRLLERLAEELAEVSTIESRP 184 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 185 RQDGRNMVMVLAP 197 >gi|119945878|ref|YP_943558.1| translation initiation factor IF-3 [Psychromonas ingrahamii 37] gi|119864482|gb|ABM03959.1| bacterial translation initiation factor 3 (bIF-3) [Psychromonas ingrahamii 37] Length = 182 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 88/136 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E++LDLVEI + P VC+I++ K Y K+ E RK QK +KE+K RP Sbjct: 46 LNMAVESDLDLVEISPNAEPPVCRIMNYGKFLYEKTKSVKEQRKNQKQVQLKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G K K+++++RGRE+ HQ LG +LL+ IK EIS ++ P Sbjct: 106 DIGDYQVKLRNLTRFLEEGNKAKVTLRYRGREMAHQSLGIDLLNRIKADLAEISVVESFP 165 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQM+M+L K Sbjct: 166 KMEGRQMVMVLGPKRA 181 >gi|163942309|ref|YP_001647193.1| translation initiation factor IF-3 [Bacillus weihenstephanensis KBAB4] gi|163864506|gb|ABY45565.1| translation initiation factor IF-3 [Bacillus weihenstephanensis KBAB4] Length = 166 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 30 LDLAAGLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 90 DEHDFNTKLRNAVKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 150 KMEGRSMFLVLAPK 163 >gi|326331229|ref|ZP_08197523.1| translation initiation factor IF-3 [Nocardioidaceae bacterium Broad-1] gi|325950999|gb|EGD43045.1| translation initiation factor IF-3 [Nocardioidaceae bacterium Broad-1] Length = 271 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVEI P VCK++D K +Y + A EAR+ Q + IKE+K+RP I Sbjct: 79 LRLAQEADLDLVEIAPQGKPPVCKLMDYGKFKYENAQKAREARRNQTNVIIKEMKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVKI++ FRGRE +LG LL + + ++ ++ P Sbjct: 139 DKHDYETKKGHVVRFLNAGDKVKITIMFRGREQHRPELGFRLLQQLADDVQDLGFVESSP 198 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 199 KQDGRNMIMVLGP 211 >gi|56964454|ref|YP_176185.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16] gi|61213073|sp|Q5WEI6|IF3_BACSK RecName: Full=Translation initiation factor IF-3 gi|56910697|dbj|BAD65224.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16] Length = 167 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ NLDLV + + P VC+I+D K RY QK EARK QK IKEV++ P I Sbjct: 31 LEMAQRVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKEKEARKNQKVITIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KL+ FL G KVK S++FRGR I H +GR++L + + +I+ I+ P Sbjct: 91 EANDFNTKLRNARKFLEKGDKVKASIRFRGRAITHSQIGRDVLERLAKECEDIATIEARP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++++ K Sbjct: 151 KMEGRSMFLVMAPKT 165 >gi|126435575|ref|YP_001071266.1| translation initiation factor 3 [Mycobacterium sp. JLS] gi|126235375|gb|ABN98775.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. JLS] Length = 238 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 79 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 139 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFVETSA 198 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 199 KQDGRNMTMVLAP 211 >gi|265987665|ref|ZP_06100222.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] gi|264659862|gb|EEZ30123.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] Length = 196 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 75/134 (55%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQ++ IKE+KMRP I Sbjct: 63 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQRTVEIKEIKMRPNI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 123 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 182 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 183 KLEGRQMMMVLAPR 196 >gi|108799947|ref|YP_640144.1| translation initiation factor 3 [Mycobacterium sp. MCS] gi|119869057|ref|YP_939009.1| translation initiation factor 3 [Mycobacterium sp. KMS] gi|108770366|gb|ABG09088.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. MCS] gi|119695146|gb|ABL92219.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. KMS] Length = 238 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 79 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 138 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 139 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFVETSA 198 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 199 KQDGRNMTMVLAP 211 >gi|302541296|ref|ZP_07293638.1| translation initiation factor IF-3 [Streptomyces hygroscopicus ATCC 53653] gi|302458914|gb|EFL22007.1| translation initiation factor IF-3 [Streptomyces himastatinicus ATCC 53653] Length = 233 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 63 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 123 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFVESNP 182 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 183 KQDGRNMIMVLGP 195 >gi|254465435|ref|ZP_05078846.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I] gi|206686343|gb|EDZ46825.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I] Length = 137 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA EA LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MDMAAEAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ+LGRELL + E +I +++ P Sbjct: 61 DTHDYEVKMRNVFKFLENGDKVKITLRFRGREMAHQNLGRELLERVAEDTKDIGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|319943476|ref|ZP_08017758.1| translation initiation factor IF3 [Lautropia mirabilis ATCC 51599] gi|319743291|gb|EFV95696.1| translation initiation factor IF3 [Lautropia mirabilis ATCC 51599] Length = 191 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 93/134 (69%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+EA++DLVEI + TP VC+++D K RY QK A EA+ +QK IKEVK RP D Sbjct: 56 RMAEEADVDLVEIAPNATPPVCRLMDYGKFRYQEQKRAAEAKARQKVVQIKEVKFRPQTD 115 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL+DG KVKI+++FRGRE+ HQ+ G LL ++ EI++++ P+ Sbjct: 116 DGDYNIKLRNMISFLQDGDKVKITLRFRGREMAHQEFGIRLLERVRNDIEEIAQVESMPR 175 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 176 LEGRQMVMMVAPKK 189 >gi|226311194|ref|YP_002771088.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] gi|226094142|dbj|BAH42584.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] Length = 173 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLV + + P VC+I+D K +Y K EARK QK +KEV+ I Sbjct: 36 LRIAQEAELDLVNVAPTAKPPVCRIMDYGKFKYEQAKKEKEARKNQKIIELKEVRFSSNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL D KVK +++FRGREI H ++G ++ + + +++ + +P Sbjct: 96 EEHDFQTKLRNVRKFLEDQHKVKCTIRFRGREITHSEIGLGVMERVAAQCEDLAAPERKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 156 KIEGRSMIMILAPKA 170 >gi|15827729|ref|NP_301992.1| translation initiation factor IF-3 [Mycobacterium leprae TN] gi|221230206|ref|YP_002503622.1| translation initiation factor IF-3 [Mycobacterium leprae Br4923] gi|13093280|emb|CAC31775.1| initiation factor 3 [Mycobacterium leprae] gi|219933313|emb|CAR71489.1| initiation factor 3 [Mycobacterium leprae Br4923] Length = 185 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEVAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 78 DDHDYETKKSHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|14194828|sp|Q9CC22|IF3_MYCLE RecName: Full=Translation initiation factor IF-3 Length = 202 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEVAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 95 DDHDYETKKSHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|218288922|ref|ZP_03493173.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius LAA1] gi|258512136|ref|YP_003185570.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241011|gb|EED08188.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius LAA1] gi|257478862|gb|ACV59181.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 154 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + + P VC+I+D K +Y K E+RK QK +KEV+M P I Sbjct: 17 LRLAEERNLDLVNVAPNAKPPVCRIMDYGKFKYEQSKRERESRKHQKVVLLKEVRMTPNI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL VKLK + FL +G KVK+SV+FRGREI HQ++G+ELL + + E + ++ P Sbjct: 77 DEHDLNVKLKNVLKFLSEGSKVKVSVRFRGREITHQNIGQELLERLAKSAEEHAIVERAP 136 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 137 KLEGRHMVMILAPK 150 >gi|148661437|ref|YP_001282960.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] gi|148505589|gb|ABQ73398.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] Length = 222 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 56 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 116 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 175 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 176 KQDGRNMTMVLAP 188 >gi|223765|prf||0910186A initiation factor IF3 Length = 171 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 34 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L + E +I+ ++ P Sbjct: 94 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAP 153 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 154 KMDGRNMFLVLAPK 167 >gi|328955209|ref|YP_004372542.1| bacterial translation initiation factor 3 (bIF-3) [Coriobacterium glomerans PW2] gi|328455533|gb|AEB06727.1| bacterial translation initiation factor 3 (bIF-3) [Coriobacterium glomerans PW2] Length = 214 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLVEI + P VC+++D K +Y A ARK Q +KE+K RP ID Sbjct: 67 RIADEQGLDLVEIAPNAEPPVCRVMDYGKFKYQQAMKAKAARKNQSRVEVKEMKFRPKID 126 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + + + ++ PK Sbjct: 127 VGDFETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAKDLESCAVVESAPK 186 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 187 LEGRNMLMVLAP 198 >gi|229013778|ref|ZP_04170906.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048] gi|229062259|ref|ZP_04199580.1| Translation initiation factor IF-3 [Bacillus cereus AH603] gi|229135410|ref|ZP_04264198.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196] gi|229169302|ref|ZP_04297012.1| Translation initiation factor IF-3 [Bacillus cereus AH621] gi|228614065|gb|EEK71180.1| Translation initiation factor IF-3 [Bacillus cereus AH621] gi|228648053|gb|EEL04100.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196] gi|228716987|gb|EEL68668.1| Translation initiation factor IF-3 [Bacillus cereus AH603] gi|228747447|gb|EEL97322.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048] Length = 167 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P I Sbjct: 31 LDLAAGLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E+S I+ +P Sbjct: 91 DEHDFNTKLRNAVKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|311031378|ref|ZP_07709468.1| translation initiation factor IF-3 [Bacillus sp. m3-13] Length = 167 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LEIAARANLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKDKEARKNQKVISLKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E+S I+ P Sbjct: 91 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSAACAEVSTIESHP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M +IL+ K Sbjct: 151 KMDGRSMFLILAPK 164 >gi|50842895|ref|YP_056122.1| translation initiation factor IF-3 [Propionibacterium acnes KPA171202] gi|50840497|gb|AAT83164.1| translation initiation factor IF-3 [Propionibacterium acnes KPA171202] gi|332675831|gb|AEE72647.1| translation initiation factor IF-3 [Propionibacterium acnes 266] Length = 268 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 75 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 135 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 194 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 195 KQEGRNMLMILAP 207 >gi|302878339|ref|YP_003846903.1| translation initiation factor IF-3 [Gallionella capsiferriformans ES-2] gi|302581128|gb|ADL55139.1| translation initiation factor IF-3 [Gallionella capsiferriformans ES-2] Length = 164 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI P VC+I+D K +Y K EA+ KQK +KE+K RP Sbjct: 26 LRLAGEAELDLVEISPMADPPVCRIMDFGKFKYAESKKQHEAKLKQKQVQVKEIKFRPGT 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G L+ ++ E + ++ P Sbjct: 86 DDGDYNIKLRNLTKFLLDGDKTKITLRFRGREMAHQEIGMRLIERVRNDLEEYAVVEQFP 145 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQM+M+LS K Sbjct: 146 KMEGRQMVMVLSPKAA 161 >gi|304436954|ref|ZP_07396917.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369905|gb|EFM23567.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 188 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 67/135 (49%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERLGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKV 165 >gi|91787976|ref|YP_548928.1| translation initiation factor 3 [Polaromonas sp. JS666] gi|91697201|gb|ABE44030.1| bacterial translation initiation factor 3 (bIF-3) [Polaromonas sp. JS666] Length = 177 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI + P VC+++D K +Y QK A EA+ KQK IKE+K RP Sbjct: 24 LRLAGEADVDLVEISPTAVPPVCRLMDYGKFKYAEQKKAAEAKSKQKVIEIKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLEEGDKCKITLRFRGREITHQELGLALLARIRDELADLIVVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 144 KLEGRQMVMMIAP 156 >gi|315282775|ref|ZP_07871105.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120] gi|313613579|gb|EFR87393.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120] Length = 189 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 53 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 113 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 172 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLAP 185 >gi|325982724|ref|YP_004295126.1| Translation initiation factor IF-3 [Nitrosomonas sp. AL212] gi|325532243|gb|ADZ26964.1| Translation initiation factor IF-3 [Nitrosomonas sp. AL212] Length = 184 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 84/131 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A++A +DLVEI + P VC+++D K RY K +A+ KQK IKE+K RP D Sbjct: 33 LAEDAGVDLVEIAPTAQPPVCRLMDYGKFRYQESKKKHDAKLKQKQVQIKEIKFRPNTDE 92 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D +KL+ + FL +G KVK++++FRGRE+ HQ+ G LL +K+ + ++ PK Sbjct: 93 GDYNIKLRNLISFLDEGDKVKVTLRFRGREMAHQEFGMRLLERVKDDLESFAIVEQFPKM 152 Query: 123 EGRQMIMILSS 133 EGRQM+M+LS Sbjct: 153 EGRQMVMVLSP 163 >gi|323141059|ref|ZP_08075964.1| translation initiation factor IF-3 [Phascolarctobacterium sp. YIT 12067] gi|322414435|gb|EFY05249.1| translation initiation factor IF-3 [Phascolarctobacterium sp. YIT 12067] Length = 167 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 66/136 (48%), Positives = 91/136 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLVEI + P VC+I+D K RY QK EARKKQK+ IKEVK+RP I Sbjct: 31 LKLALENHLDLVEIAPTAKPPVCRIMDYGKYRYEQQKREKEARKKQKTFDIKEVKLRPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK K FL DG KVK+++ FRGRE+ H +LG LL+ + ++ EI+ ++ P Sbjct: 91 EDHDFNVKYKNAVRFLEDGDKVKVTIMFRGRELSHPELGEVLLNRMAQQLKEIAVVERVP 150 Query: 121 KFEGRQMIMILSSKCV 136 K EG+ MIMI++ K Sbjct: 151 KLEGKNMIMIVAPKPA 166 >gi|167629866|ref|YP_001680365.1| translation initiation factor if-3 [Heliobacterium modesticaldum Ice1] gi|167592606|gb|ABZ84354.1| translation initiation factor if-3 [Heliobacterium modesticaldum Ice1] Length = 181 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE+NLDLVE+ + P VC+I+D K ++ K EARKKQK IKEVK+RP I Sbjct: 18 LRIAQESNLDLVEVAPTARPPVCRIMDYGKYKFEQSKREREARKKQKIVSIKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K + FL DG KVK+++ FRGREI H +LGR+L + E S ++ + Sbjct: 78 EDHDFDTKARNAIRFLEDGDKVKVTIMFRGREITHPELGRQLCVRLAEVCRPYSNVERDA 137 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 138 KVEGRNMIMILAPKA 152 >gi|56697480|ref|YP_167848.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3] gi|81676179|sp|Q5LQ58|IF3_SILPO RecName: Full=Translation initiation factor IF-3 gi|56679217|gb|AAV95883.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3] Length = 182 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 66/126 (52%), Positives = 87/126 (69%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP D HD +V Sbjct: 53 GLDLVEISPNATPPVCKIMDFGKYKYEQQKRESEARKKQKIIEVKEVKFRPNTDTHDYEV 112 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E+ +I+ PK EGRQM Sbjct: 113 KMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDVKEMGKIENMPKMEGRQM 172 Query: 128 IMILSS 133 IM++ Sbjct: 173 IMMIGP 178 >gi|170749563|ref|YP_001755823.1| translation initiation factor IF-3 [Methylobacterium radiotolerans JCM 2831] gi|259491509|sp|B1M6P9|IF3_METRJ RecName: Full=Translation initiation factor IF-3 gi|170656085|gb|ACB25140.1| translation initiation factor IF-3 [Methylobacterium radiotolerans JCM 2831] Length = 173 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVEI + P VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LNLAEEVGLDLVEIAPNSVPPVCKLLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K++ F +G KVK++++FRGRE+ HQD+G LL +K EI++++ EP Sbjct: 100 DKHDYDTKMKSVHRFFEEGDKVKVTLRFRGREMAHQDIGLRLLERVKSETAEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|315649038|ref|ZP_07902132.1| translation initiation factor IF-3 [Paenibacillus vortex V453] gi|315275719|gb|EFU39073.1| translation initiation factor IF-3 [Paenibacillus vortex V453] Length = 164 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAIDLNLDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL++G KVK SV+FRGREI H ++G+++L +K ++ I+ +P Sbjct: 90 EEHDYQTKLRNVVKFLKEGDKVKCSVRFRGREITHANIGQKILERVKVEVADLCVIERQP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPKA 164 >gi|172058199|ref|YP_001814659.1| translation initiation factor IF-3 [Exiguobacterium sibiricum 255-15] gi|171990720|gb|ACB61642.1| translation initiation factor IF-3 [Exiguobacterium sibiricum 255-15] Length = 176 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLV + TP VCKI+D K R+ +QK E RK QK +KEV++ P I Sbjct: 40 LRLAEEADLDLVMVAPQATPPVCKIMDYGKYRFELQKKDKETRKNQKVIQMKEVRLSPTI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D Q K + FL +G KVK S++FRGR I H ++GR +L + E I+ P Sbjct: 100 EENDFQTKFRNAKKFLENGNKVKASIRFRGRAITHSEIGRRVLERLATELSEFGVIEQRP 159 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 160 KMEGRSMFLVLAPKK 174 >gi|182439698|ref|YP_001827417.1| translation initiation factor IF-3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780362|ref|ZP_08239627.1| Translation initiation factor IF-3 [Streptomyces cf. griseus XylebKG-1] gi|62896304|emb|CAH94290.1| translation initiation factor IF-3 [Streptomyces griseus subsp. griseus] gi|178468214|dbj|BAG22734.1| putative translation initiation factor IF-3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660695|gb|EGE45541.1| Translation initiation factor IF-3 [Streptomyces cf. griseus XylebKG-1] Length = 238 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 54 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 114 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 173 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 174 KQDGRNMIMVLGP 186 >gi|289643249|ref|ZP_06475375.1| translation initiation factor IF-3 [Frankia symbiont of Datisca glomerata] gi|289506954|gb|EFD27927.1| translation initiation factor IF-3 [Frankia symbiont of Datisca glomerata] Length = 214 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 66 MRLAQEADLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 125 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 126 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 185 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 186 KQDGRNMTMVMAP 198 >gi|124213|sp|P03000|IF3_BACST RecName: Full=Translation initiation factor IF-3 gi|580890|emb|CAA34312.1| unnamed protein product [Geobacillus stearothermophilus] Length = 172 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 35 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++F+GR I H+++G+ +L + E +I+ ++ P Sbjct: 95 EEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAP 154 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 155 KMDGRNMFLVLAPK 168 >gi|83309440|ref|YP_419704.1| translation initiation factor 3 [Magnetospirillum magneticum AMB-1] gi|82944281|dbj|BAE49145.1| Translation initiation factor 3 [Magnetospirillum magneticum AMB-1] Length = 173 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVE+ + P VCKILD K +Y QK ARKKQK +KEVK+RP I Sbjct: 40 LVMAEEAGLDLVEVSPNADPPVCKILDFGKFKYEDQKKKNAARKKQKVIEVKEVKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +++ P Sbjct: 100 DDHDYDVKMRSMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLERVRDDLEDLGKVEQIP 159 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M++S+K Sbjct: 160 KMEGRQMVMVISAK 173 >gi|254385012|ref|ZP_05000346.1| translation initiation factor IF-3 [Streptomyces sp. Mg1] gi|194343891|gb|EDX24857.1| translation initiation factor IF-3 [Streptomyces sp. Mg1] Length = 243 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEDLGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|313896162|ref|ZP_07829715.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137 str. F0430] gi|312974961|gb|EFR40423.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137 str. F0430] Length = 188 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 67/135 (49%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPNARPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSERMGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKA 165 >gi|47094154|ref|ZP_00231874.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b H7858] gi|289435125|ref|YP_003464997.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|293596760|ref|ZP_05264091.2| translation initiation factor IF-3 [Listeria monocytogenes J2818] gi|315303674|ref|ZP_07874199.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596] gi|47017479|gb|EAL08292.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b H7858] gi|289171369|emb|CBH27911.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|293592099|gb|EFG00434.1| translation initiation factor IF-3 [Listeria monocytogenes J2818] gi|313618353|gb|EFR90389.1| translation initiation factor IF-3 [Listeria innocua FSL S4-378] gi|313623316|gb|EFR93548.1| translation initiation factor IF-3 [Listeria innocua FSL J1-023] gi|313627964|gb|EFR96572.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596] gi|313632797|gb|EFR99753.1| translation initiation factor IF-3 [Listeria seeligeri FSL N1-067] gi|313637378|gb|EFS02856.1| translation initiation factor IF-3 [Listeria seeligeri FSL S4-171] Length = 189 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 53 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 113 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 172 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLAP 185 >gi|219666284|ref|YP_002456719.1| translation initiation factor IF-3 [Desulfitobacterium hafniense DCB-2] gi|219536544|gb|ACL18283.1| translation initiation factor IF-3 [Desulfitobacterium hafniense DCB-2] Length = 198 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 64/132 (48%), Positives = 85/132 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLVEI + P VCKI+D K +Y K EARKKQK+ IKEVK+RP I+ Sbjct: 63 RIAAEKSLDLVEIAPTAKPPVCKIMDYGKYKYEQAKRDKEARKKQKTMEIKEVKLRPNIE 122 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL DG KVK+++ FRGRE+ H +LGR L + E + I+ +PK Sbjct: 123 DHDFETKARNAQRFLNDGDKVKVTIMFRGREVTHPELGRTLCLRLAEFCKAEANIERDPK 182 Query: 122 FEGRQMIMILSS 133 EGR MIMIL+ Sbjct: 183 LEGRNMIMILAP 194 >gi|289443095|ref|ZP_06432839.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|289447251|ref|ZP_06436995.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CPHL_A] gi|289554584|ref|ZP_06443794.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 605] gi|289569688|ref|ZP_06449915.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T17] gi|289574310|ref|ZP_06454537.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|289750189|ref|ZP_06509567.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T92] gi|289753729|ref|ZP_06513107.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|289757745|ref|ZP_06517123.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] gi|289416014|gb|EFD13254.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|289420209|gb|EFD17410.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CPHL_A] gi|289439216|gb|EFD21709.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 605] gi|289538741|gb|EFD43319.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|289543442|gb|EFD47090.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T17] gi|289690776|gb|EFD58205.1| initiation factor IF-3 infC [Mycobacterium tuberculosis T92] gi|289694316|gb|EFD61745.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|289713309|gb|EFD77321.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] Length = 214 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 48 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 108 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 167 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 168 KQDGRNMTMVLAP 180 >gi|121535636|ref|ZP_01667442.1| translation initiation factor IF-3 [Thermosinus carboxydivorans Nor1] gi|121305806|gb|EAX46742.1| translation initiation factor IF-3 [Thermosinus carboxydivorans Nor1] Length = 167 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVE+ P VC+I+D K +Y QK EA+KKQK +KEVK+RP I Sbjct: 31 LRLAGEQQLDLVEVAPQAKPPVCRIMDFGKFKYEQQKRDKEAKKKQKIITVKEVKIRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL DG KVK+++ FRGRE+ H +LG+++L+ + I+ ++ EP Sbjct: 91 EEHDFNVKIKHAQRFLEDGDKVKVTIMFRGRELSHPELGKQVLTKMANELKNIAAVEREP 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ MIMIL+ K Sbjct: 151 KLEGKNMIMILAPKT 165 >gi|221310829|ref|ZP_03592676.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] gi|221315154|ref|ZP_03596959.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320072|ref|ZP_03601366.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324354|ref|ZP_03605648.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. SMY] gi|296331561|ref|ZP_06874030.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675480|ref|YP_003867152.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii str. W23] gi|308174583|ref|YP_003921288.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7] gi|321312421|ref|YP_004204708.1| translation initiation factor IF-3 [Bacillus subtilis BSn5] gi|291485321|dbj|BAI86396.1| translation initiation factor IF-3 [Bacillus subtilis subsp. natto BEST195] gi|296151156|gb|EFG92036.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413724|gb|ADM38843.1| translation initiation factor IF-3 [Bacillus subtilis subsp. spizizenii str. W23] gi|307607447|emb|CBI43818.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7] gi|320018695|gb|ADV93681.1| translation initiation factor IF-3 [Bacillus subtilis BSn5] gi|328554506|gb|AEB24998.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens TA208] gi|328912910|gb|AEB64506.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens LL3] Length = 167 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 30 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKEKEARKNQKIINLKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPK 163 >gi|297583668|ref|YP_003699448.1| translation initiation factor IF-3 [Bacillus selenitireducens MLS10] gi|297142125|gb|ADH98882.1| translation initiation factor IF-3 [Bacillus selenitireducens MLS10] Length = 168 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ A+LDLV + + P VC+I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LEMAQNADLDLVMVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H ++GRE+L + E +IS I+ +P Sbjct: 91 EEHDFNTKLRNARKFLTKGDKVKAAIRFRGRAITHSEIGREVLMRMAEECKDISTIESKP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M +IL+ Sbjct: 151 KMEGRSMFLILAP 163 >gi|126735563|ref|ZP_01751308.1| translation initiation factor IF-3 [Roseobacter sp. CCS2] gi|126714750|gb|EBA11616.1| translation initiation factor IF-3 [Roseobacter sp. CCS2] Length = 136 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA +A LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MEMADDAGLDLVEISPNANPPVCKIMDYGKFKYETQKKEAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL +G KVKI+++FRGRE+ HQ LGRELL + E E +++ P Sbjct: 61 DNHDYEVKMRNVFKFLDNGDKVKITLRFRGREMAHQQLGRELLERVAEDTKEAGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|328881243|emb|CCA54482.1| Translation initiation factor 3 [Streptomyces venezuelae ATCC 10712] Length = 257 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 75 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 134 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 135 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEELGFIESNP 194 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 195 KQDGRNMIMVLGP 207 >gi|16079939|ref|NP_390765.1| translation initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] gi|238054379|sp|P55872|IF3_BACSU RecName: Full=Translation initiation factor IF-3 gi|1770007|emb|CAA99616.1| translation initiation factor IF3 [Bacillus subtilis] gi|2635352|emb|CAB14847.1| initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] Length = 173 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 36 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKEKEARKNQKIINLKEVRLSPTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 96 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 155 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 156 KMDGRSMFLMLAPK 169 >gi|227497641|ref|ZP_03927859.1| possible translation initiation factor IF3 [Actinomyces urogenitalis DSM 15434] gi|226832912|gb|EEH65295.1| possible translation initiation factor IF3 [Actinomyces urogenitalis DSM 15434] Length = 194 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ P VCK++D K +Y A +AR+ Q +T +KEV+ RP I Sbjct: 20 LRLAEEAGLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEVQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ ++ FL+ G KVK V+FRGRE +LG LL + E G++ ++ P Sbjct: 80 DQHDYATKMGHVERFLKGGDKVKCVVRFRGREQSRPELGIRLLQRVAEEIGDLGTVESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GRQM+M+L+ Sbjct: 140 RQDGRQMVMVLAP 152 >gi|311113266|ref|YP_003984488.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931] gi|310944760|gb|ADP41054.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931] Length = 233 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 52 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAVKARESRKKQVNAVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E E+S I+ P Sbjct: 112 DTHDYETKVGHARRFLTGGDKVKAMIQFRGREQQRPEMGVRLLERLAEELAEVSTIESRP 171 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 172 RQDGRNMVMVLAP 184 >gi|23099607|ref|NP_693073.1| translation initiation factor IF-3 [Oceanobacillus iheyensis HTE831] gi|22777837|dbj|BAC14108.1| translation initiation factor IF-3 [Oceanobacillus iheyensis HTE831] Length = 168 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV+ P I Sbjct: 31 LDIATTRNLDLVLVAPNAKPPVCRIMDYGKYRFEQQKKEKEARKKQKVINVKEVRFTPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KLK FL G KVK +V+FRGR I H++LGRE+L E ++ I+ +P Sbjct: 91 GDHDFETKLKNARKFLEKGDKVKAAVRFRGRAITHKELGREVLDRFAEEVKDLGTIETKP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 151 KMEGRNMFMMVAP 163 >gi|23016432|ref|ZP_00056188.1| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 173 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVE+ + P VCKILD K +Y QK ARKKQK +KE+K+RP I Sbjct: 40 LVMAEEAGLDLVEVSPNADPPVCKILDFGKFKYEDQKKKNAARKKQKVIEVKEIKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++++ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +++ P Sbjct: 100 DDHDYGVKMRSMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLEKVRDDLEDLGKVEQVP 159 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M++S+K Sbjct: 160 KMEGRQMVMVISAK 173 >gi|84515522|ref|ZP_01002884.1| translation initiation factor [Loktanella vestfoldensis SKA53] gi|84510805|gb|EAQ07260.1| translation initiation factor [Loktanella vestfoldensis SKA53] Length = 136 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKE+K RP Sbjct: 1 MQMAEEAGLDLVEISPNAVPPVCKIMDFGKFKYETQKKEAEARKKQKIIEIKEIKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ FL +G KVKI+++FRGRE+ HQ+LGR+LL + E E +++ P Sbjct: 61 DSHDYEVKMRSVFKFLENGDKVKITLRFRGREMAHQELGRQLLERVAEDTKETGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|269215921|ref|ZP_06159775.1| translation initiation factor IF-3 [Slackia exigua ATCC 700122] gi|269130180|gb|EEZ61258.1| translation initiation factor IF-3 [Slackia exigua ATCC 700122] Length = 192 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLVEI + P VC+I+D K +Y A +ARK Q IKE+K RP I Sbjct: 39 LRIAETEGLDLVEIAPNANPPVCRIMDYGKFKYDQAIRAKQARKNQTKVEIKEMKFRPKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D K K + FL DG KVKI++ FRGRE+ H + G +L + + +++ I+ P Sbjct: 99 DIGDYTTKKKHVLRFLADGAKVKITIMFRGREMAHPEQGLSILERLADDLKDVAVIESAP 158 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 159 KMEGRNMHMMIAP 171 >gi|229824399|ref|ZP_04450468.1| hypothetical protein GCWU000282_01720 [Catonella morbi ATCC 51271] gi|229786199|gb|EEP22313.1| hypothetical protein GCWU000282_01720 [Catonella morbi ATCC 51271] Length = 171 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLV + + P V +I+D K RY +QK E RK QK +KEV++ P I Sbjct: 31 LTIAESFGLDLVLVSPNAKPPVARIMDYGKYRYEMQKKEKEQRKNQKIVTVKEVRLSPGI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL G KVK S++FRGR I H++LG+++L + + +S ++ P Sbjct: 91 EDHDYQTKLRQAIKFLEHGDKVKASIRFRGRAITHKELGQDVLEDFIDDTSHVSTVEARP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M ++L+ Sbjct: 151 KMEGRSMFIVLAP 163 >gi|118469171|ref|YP_888086.1| translation initiation factor IF-3 [Mycobacterium smegmatis str. MC2 155] gi|118170458|gb|ABK71354.1| translation initiation factor IF-3 [Mycobacterium smegmatis str. MC2 155] Length = 206 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 47 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYETAQKARESRKNQQQTVVKEQKLRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 107 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 166 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 167 KQDGRNMTMVLAP 179 >gi|25028065|ref|NP_738119.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] gi|23493349|dbj|BAC18319.1| putative translation initiation factor IF-3 [Corynebacterium efficiens YS-314] Length = 225 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 88 KLAFDADLDLVEVAPTAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 147 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ K Sbjct: 148 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVAEYGVVETRAK 207 Query: 122 FEGRQMIMILSS 133 +GR M M++ Sbjct: 208 QDGRNMTMVIGP 219 >gi|170742360|ref|YP_001771015.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46] gi|259491510|sp|B0UP34|IF3_METS4 RecName: Full=Translation initiation factor IF-3 gi|168196634|gb|ACA18581.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46] Length = 173 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 70/134 (52%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EA LDLVEI + TP VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LQVAEEAGLDLVEIAPNSTPPVCKLLDYGRYRFNEQKKQAEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGRE+ HQDLG LL +K EI++++ EP Sbjct: 100 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREMAHQDLGLRLLERVKAETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIMIL+ + Sbjct: 160 QLEGRQMIMILAPR 173 >gi|297155954|gb|ADI05666.1| translation initiation factor IF-3 [Streptomyces bingchenggensis BCW-1] Length = 250 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 80 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 139 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 140 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQELGFVESNP 199 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 200 KQDGRNMIMVLGP 212 >gi|297195409|ref|ZP_06912807.1| translation initiation factor IF-3 [Streptomyces pristinaespiralis ATCC 25486] gi|197719221|gb|EDY63129.1| translation initiation factor IF-3 [Streptomyces pristinaespiralis ATCC 25486] Length = 216 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAADVEDLGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|154687021|ref|YP_001422182.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens FZB42] gi|311069382|ref|YP_003974305.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942] gi|154352872|gb|ABS74951.1| InfC [Bacillus amyloliquefaciens FZB42] gi|310869899|gb|ADP33374.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942] Length = 167 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 30 LEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKDKEARKNQKIINLKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 90 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPK 163 >gi|187929056|ref|YP_001899543.1| translation initiation factor IF-3 [Ralstonia pickettii 12J] gi|187725946|gb|ACD27111.1| translation initiation factor IF-3 [Ralstonia pickettii 12J] Length = 173 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A +A+ KQK +KEVK RP Sbjct: 37 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHDAKLKQKVIQVKEVKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL+ FL DG +VK++++FRGRE+ HQ+LG +L IK E +++ P Sbjct: 97 DDNDYGVKLRNATRFLEDGDRVKVTLRFRGREMAHQELGMRVLERIKSDLEEFGQVEQMP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 157 KMEGRQAVMMLAPKK 171 >gi|288553676|ref|YP_003425611.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4] gi|288544836|gb|ADC48719.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4] Length = 167 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ NLDLV + + P VC+I+D K RY QK EARKKQK +KEV++ P I Sbjct: 31 LEMAQNVNLDLVCVAPAAKPPVCRIMDYGKFRYEQQKKDKEARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK +++FRGR I H +GR +L + + +++ I+ +P Sbjct: 91 EDHDFNTKLRNARKFLEKGDKVKAAIRFRGRAITHSQIGRVVLERLAKECEDVAVIEAKP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGR M +IL+ K Sbjct: 151 KMEGRSMFLILAPKT 165 >gi|260433905|ref|ZP_05787876.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis ITI-1157] gi|260417733|gb|EEX10992.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis ITI-1157] Length = 144 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A +A LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 8 MQLAADAGLDLVEISPNANPPVCKIMDFGKYKYETQKREAEARKKQKIIEVKEVKFRPNT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + FL G KVK++++FRGRE+ HQ+LGRELL + E EI +I+ P Sbjct: 68 DTHDYEVKMRNVVKFLEKGDKVKVTLRFRGREMAHQNLGRELLQRVAEDVKEIGKIENMP 127 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 128 KMEGRQMIMMIGP 140 >gi|289772685|ref|ZP_06532063.1| translation initiation factor IF-3 [Streptomyces lividans TK24] gi|289702884|gb|EFD70313.1| translation initiation factor IF-3 [Streptomyces lividans TK24] Length = 246 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLGP 196 >gi|89893013|ref|YP_516500.1| hypothetical protein DSY0267 [Desulfitobacterium hafniense Y51] gi|89332461|dbj|BAE82056.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 191 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 64/132 (48%), Positives = 85/132 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLVEI + P VCKI+D K +Y K EARKKQK+ IKEVK+RP I+ Sbjct: 56 RIAAEKSLDLVEIAPTAKPPVCKIMDYGKYKYEQAKRDKEARKKQKTMEIKEVKLRPNIE 115 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL DG KVK+++ FRGRE+ H +LGR L + E + I+ +PK Sbjct: 116 DHDFETKARNAQRFLNDGDKVKVTIMFRGREVTHPELGRTLCLRLAEFCKAEANIERDPK 175 Query: 122 FEGRQMIMILSS 133 EGR MIMIL+ Sbjct: 176 LEGRNMIMILAP 187 >gi|303248735|ref|ZP_07334988.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans JJ] gi|302489900|gb|EFL49828.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans JJ] Length = 161 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP Sbjct: 20 LRMAQEKGLDLVEVAPNADPPVCRIMDFGRFKYQQQKKLQEARKKASTVQLKEIKVRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL +G + K++V FRGREI+H+D G +LS + G++++++ EP Sbjct: 80 DEHDYQTKLKHIRRFLEEGDRCKVTVFFRGREIVHKDRGVLILSRVVADLGDLAKVEQEP 139 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 140 RTEGRMMTMLLAP 152 >gi|331697626|ref|YP_004333865.1| translation initiation factor IF-3 [Pseudonocardia dioxanivorans CB1190] gi|326952315|gb|AEA26012.1| Translation initiation factor IF-3 [Pseudonocardia dioxanivorans CB1190] Length = 250 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 83 LRLAQEAELDLVEVAAQARPPVCKLMDFGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + E ++ ++ P Sbjct: 143 DTHDYETKKRNVVRFLEGGNKVKVTIMFRGREQSRPELGFRLLQRLAEDVVDLGVVEAAP 202 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 203 KQDGRNMTMVIAP 215 >gi|90407012|ref|ZP_01215202.1| translation initiation factor 3 [Psychromonas sp. CNPT3] gi|90311883|gb|EAS39978.1| translation initiation factor 3 [Psychromonas sp. CNPT3] Length = 185 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 85/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A + NLDLVEI + P VC+I++ K Y K+A E RKKQ +KE+K RP D Sbjct: 50 NLAFDQNLDLVEISPNAEPPVCRIMNYGKFLYEKSKSAKEQRKKQVQVQLKEIKFRPGTD 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K+++++RGRE+ HQ LG LL+ IK EIS ++ PK Sbjct: 110 EGDYQVKLRNLTRFLTEGNKAKVTLRYRGREMAHQSLGLNLLNRIKADLAEISNVESFPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGRQM+M+L K Sbjct: 170 MEGRQMVMVLGPKRA 184 >gi|238927111|ref|ZP_04658871.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531] gi|238885091|gb|EEQ48729.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531] Length = 188 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 67/135 (49%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F +G KVK+++ FRGRE+ H +LGR +L + ER G++ I+ Sbjct: 91 DEHDFNVKLKNALRFAEEGNKVKVTIMFRGRELSHPELGRAVLDRVSERLGDLVSIERGA 150 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MILS K Sbjct: 151 KLEGKNMTMILSPKV 165 >gi|298293871|ref|YP_003695810.1| translation initiation factor IF-3 [Starkeya novella DSM 506] gi|296930382|gb|ADH91191.1| translation initiation factor IF-3 [Starkeya novella DSM 506] Length = 174 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 70/132 (53%), Positives = 94/132 (71%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ+A LDLVEI + P VCKILD + +Y QK A EARKKQ IKE+K+RP ID Sbjct: 43 MAQDAGLDLVEIAPNSVPPVCKILDYGRFKYQNQKKANEARKKQHVVEIKEIKLRPGIDT 102 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+KAI F +G KVK++++FRGRE+ HQ+LG +LL+ +KE I++++ EP Sbjct: 103 HDYDVKMKAIHRFFDEGDKVKVTLRFRGREMAHQELGYKLLNKVKEELATIAKVESEPSL 162 Query: 123 EGRQMIMILSSK 134 EGRQM M+L+ + Sbjct: 163 EGRQMTMVLAPR 174 >gi|284799643|ref|ZP_05984465.2| translation initiation factor IF-3 [Neisseria subflava NJ9703] gi|284797593|gb|EFC52940.1| translation initiation factor IF-3 [Neisseria subflava NJ9703] Length = 184 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 49 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 109 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFP 168 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 169 KMEGRQMVMMIAPKK 183 >gi|239917950|ref|YP_002957508.1| bacterial translation initiation factor 3 (bIF-3) [Micrococcus luteus NCTC 2665] gi|239839157|gb|ACS30954.1| bacterial translation initiation factor 3 (bIF-3) [Micrococcus luteus NCTC 2665] Length = 401 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCK++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 83 LRLAAEADLDLVEVAPTAKPPVCKLMDFGKYKYEAAVKARESRKNQVNTVLKEVRFRLKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE +LG +LL E E+ ++ +P Sbjct: 143 DKHDYETKTGHAKKFLSQGDKVKAIIQFRGREQQRPELGIKLLQQFAEDVAELGAVESQP 202 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 203 RQDGRNMVMVVGP 215 >gi|41407450|ref|NP_960286.1| translation initiation factor IF-3 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395802|gb|AAS03669.1| InfC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 184 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 78 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|292670653|ref|ZP_06604079.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541] gi|292647680|gb|EFF65652.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541] Length = 188 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/132 (48%), Positives = 90/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ + P VC+I+D K RY QK EA+KKQK+ IKEVK+RP I Sbjct: 31 LRMAEEQHLDLVEVAPNAKPPVCRIMDFGKFRYEQQKREKEAKKKQKTISIKEVKLRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKLK F+ +G KVK+++ FRGRE+ H +LGR +L + +R G++ ++ Sbjct: 91 DEHDFNVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGRVVLDRVSDRLGDLVTVERGA 150 Query: 121 KFEGRQMIMILS 132 K EG+ M MILS Sbjct: 151 KLEGKNMTMILS 162 >gi|229492674|ref|ZP_04386475.1| translation initiation factor IF-3 [Rhodococcus erythropolis SK121] gi|229320333|gb|EEN86153.1| translation initiation factor IF-3 [Rhodococcus erythropolis SK121] Length = 230 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 46 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 106 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADLGFVETSA 165 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 166 KQDGRNMTMVLAP 178 >gi|118617266|ref|YP_905598.1| initiation factor IF-3 InfC [Mycobacterium ulcerans Agy99] gi|118569376|gb|ABL04127.1| initiation factor IF-3 InfC [Mycobacterium ulcerans Agy99] Length = 178 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 78 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|271967366|ref|YP_003341562.1| translation initiation factor 3 (IF-3)-like protein [Streptosporangium roseum DSM 43021] gi|270510541|gb|ACZ88819.1| Translation initiation factor 3 (IF-3)-like protein [Streptosporangium roseum DSM 43021] Length = 222 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ ++ P VCK++D K +Y A EAR+ Q T IKE+K+RP I Sbjct: 52 LKLAQESDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARRNQAYTIIKEIKLRPKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + E ++ ++ +P Sbjct: 112 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGFRLLQRLAEDVTDLGFVESQP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 172 KQDGRNMIMVIGP 184 >gi|207724052|ref|YP_002254450.1| translation initiation factor if-3 (partial sequence) protein [Ralstonia solanacearum MolK2] gi|206589261|emb|CAQ36223.1| probable translation initiation factor if-3 (partial sequence) protein [Ralstonia solanacearum MolK2] Length = 268 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 132 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 191 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 192 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 251 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L K Sbjct: 252 KMEGRQMVMMLMPKK 266 >gi|254474280|ref|ZP_05087670.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062] gi|211956654|gb|EEA91864.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062] Length = 155 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 93/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKILD + +Y QK A EARKKQK IKE+KMRP I Sbjct: 20 LAMAVEQGLDLVEIAPNSQPPVCKILDYGRYKYQAQKKAAEARKKQKIVEIKEIKMRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++ + F G KVK++++FRGRE+ HQDLG +LL +KE +I++++ P Sbjct: 80 DTHDYEVKMRNMMRFFESGDKVKVTLRFRGREMAHQDLGMKLLLKVKEETQDIAKVESHP 139 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 140 KLEGRQMMMVLAP 152 >gi|126729631|ref|ZP_01745444.1| translation initiation factor IF-3 [Sagittula stellata E-37] gi|126709750|gb|EBA08803.1| translation initiation factor IF-3 [Sagittula stellata E-37] Length = 137 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 94/133 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+ A LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MEMAERAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD QVK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + + EI +++ P Sbjct: 61 DIHDYQVKMRNVMKFLENGDKVKVTLRFRGREMAHQNLGRELLERVADDVKEIGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGP 133 >gi|220924608|ref|YP_002499910.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS 2060] gi|219949215|gb|ACL59607.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS 2060] Length = 176 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVEI + +P VCK+LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 43 LQLAEEVGLDLVEIAPNSSPPVCKLLDYGRYRFNEQKKQAEARKRQKTVEVKEIKLRPGI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGRE+ HQDLG LL +K ++++++ EP Sbjct: 103 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREMAHQDLGLRLLERVKAETQDVAKVESEP 162 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIMIL+ + Sbjct: 163 QLEGRQMIMILAPR 176 >gi|205374568|ref|ZP_03227364.1| translation initiation factor IF-3 [Bacillus coahuilensis m4-4] Length = 189 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + + P V +I+D K ++ QK EARK QK +KEV++ P I Sbjct: 53 LEIAGRVNLDLVLVAPNAKPPVARIMDYGKYKFEQQKKDKEARKNQKIINLKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+++G+ +L E +++ I+ +P Sbjct: 113 EEHDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFAEACKDVATIESKP 172 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 173 KMDGRSMFLVLAP 185 >gi|302533486|ref|ZP_07285828.1| translation initiation factor IF-3 [Streptomyces sp. C] gi|302442381|gb|EFL14197.1| translation initiation factor IF-3 [Streptomyces sp. C] Length = 234 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEELGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|114765978|ref|ZP_01444992.1| translation initiation factor IF-3 [Pelagibaca bermudensis HTCC2601] gi|114541792|gb|EAU44830.1| translation initiation factor IF-3 [Roseovarius sp. HTCC2601] Length = 136 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A++A LDLVEI + P VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MELAEQAGLDLVEISPNANPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VK++ + FL G KVKI+++FRGRE+ HQ+LGRELL + E E+ +++ P Sbjct: 61 DIHDYDVKMRNVLKFLEKGDKVKITLRFRGREMAHQNLGRELLERVAEDVKELGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM++ Sbjct: 121 KMEGRQMIMMIGP 133 >gi|257790986|ref|YP_003181592.1| translation initiation factor IF-3 [Eggerthella lenta DSM 2243] gi|317488304|ref|ZP_07946867.1| translation initiation factor IF-3 [Eggerthella sp. 1_3_56FAA] gi|325830726|ref|ZP_08164110.1| translation initiation factor IF-3 [Eggerthella sp. HGA1] gi|257474883|gb|ACV55203.1| translation initiation factor IF-3 [Eggerthella lenta DSM 2243] gi|316912589|gb|EFV34135.1| translation initiation factor IF-3 [Eggerthella sp. 1_3_56FAA] gi|325487133|gb|EGC89576.1| translation initiation factor IF-3 [Eggerthella sp. HGA1] Length = 198 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLVEI + P VC+I+D K +Y A +ARK Q KE+K RP ID Sbjct: 44 RVADNQGLDLVEIAPNAEPPVCRIMDYGKFKYDQAIKAKQARKNQSKVETKEMKFRPKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K K + FL G KVKI++ FRGRE+ H +LG +L + + + + I+ +PK Sbjct: 104 VGDYTTKKKHVMRFLEAGNKVKITIMFRGREMAHPELGLTILERLADDLKDEAVIENQPK 163 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 164 MEGRNMHMLIAP 175 >gi|227548135|ref|ZP_03978184.1| translation initiation factor IF-3 [Corynebacterium lipophiloflavum DSM 44291] gi|227079797|gb|EEI17760.1| translation initiation factor IF-3 [Corynebacterium lipophiloflavum DSM 44291] Length = 181 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 44 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQDQKAREARKNQQQTVVKEQKFRPKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FL G KVK+++ FRGRE +LG LL + + GE+ ++ PK Sbjct: 104 EHDYLTKKANVERFLEKGNKVKVTIMFRGREQSRPELGYRLLERLADDIGELGVVESRPK 163 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 164 QDGRNMTMVFGP 175 >gi|226360108|ref|YP_002777886.1| translation initiation factor IF-3 [Rhodococcus opacus B4] gi|226238593|dbj|BAH48941.1| translation initiation factor IF-3 [Rhodococcus opacus B4] Length = 215 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 35 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 95 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|27262220|gb|AAN87391.1| protein translation initiation factor 3 [Heliobacillus mobilis] Length = 168 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE NLDLVE+ P VC+I+D K ++ K EARKKQK IKEVK+RP I Sbjct: 17 LRMAQERNLDLVEVAPMAKPPVCRIMDYGKYKFEQSKREREARKKQKIVNIKEVKLRPNI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D K + FL DG KVK+++ FRGREI H +LGR+L + E IS ++ + Sbjct: 77 EDNDFDTKARNAIRFLEDGDKVKVTIMFRGREITHPELGRQLCVRLAEVCKPISNVERDA 136 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 137 KVEGRNMIMILTPKA 151 >gi|319651797|ref|ZP_08005922.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2] gi|317396449|gb|EFV77162.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2] Length = 167 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ANLDLV + + P V +I+D K ++ QK EARK QK IKEV++ P I Sbjct: 31 LEIASRANLDLVLVAPNAKPPVARIMDYGKFKFEQQKKDKEARKNQKIISIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ FL G KVK S++F+GR I H+++G+ +L + E++ ++ P Sbjct: 91 EEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLIRFAQACNEVAVVESHP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M M+L+ K Sbjct: 151 KMDGRSMFMVLAPK 164 >gi|269837202|ref|YP_003319430.1| translation initiation factor IF-3 [Sphaerobacter thermophilus DSM 20745] gi|269786465|gb|ACZ38608.1| translation initiation factor IF-3 [Sphaerobacter thermophilus DSM 20745] Length = 204 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ + +P VC+++D K RY + E+RKKQ++ +KEV++RP I Sbjct: 49 LEMARERGLDLVEVQPNASPPVCRLMDYGKFRYEESRRERESRKKQRAVVVKEVRLRPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K + FL+ G KVKI+V FRGREI HQD+G LL+ + E+ ++ +D P Sbjct: 109 DDHDLNTKGRQAYRFLQSGDKVKITVLFRGREIAHQDIGEGLLNRLAEQLAPVAVVDQPP 168 Query: 121 KFEGRQMIMILSSKC 135 EGR M+M+LS K Sbjct: 169 HMEGRTMVMMLSPKA 183 >gi|217976828|ref|YP_002360975.1| translation initiation factor IF-3 [Methylocella silvestris BL2] gi|217502204|gb|ACK49613.1| translation initiation factor IF-3 [Methylocella silvestris BL2] Length = 175 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 70/134 (52%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+EA LDLVEI + P VCKILD K R+ QK + EARKKQK IKE+K+RP I Sbjct: 42 LQSAEEAGLDLVEIVPTANPPVCKILDYGKFRFLEQKKSAEARKKQKIVEIKEIKLRPGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KA+ F +G KVK++++FRGRE+ HQDLG LL +K I++++ EP Sbjct: 102 DEHDYDTKMKAVRRFFEEGDKVKVTLRFRGREMAHQDLGFRLLERVKNETVTIAKVEAEP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 162 SMEGRQMVMVLAPK 175 >gi|29427472|sp|Q8EPF5|IF3_OCEIH RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV + + P VC+I+D K R+ QK EARKKQK +KEV+ P I Sbjct: 35 LDIATTRNLDLVLVAPNAKPPVCRIMDYGKYRFEQQKKEKEARKKQKVINVKEVRFTPGI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KLK FL G KVK +V+FRGR I H++LGRE+L E ++ I+ +P Sbjct: 95 GDHDFETKLKNARKFLEKGDKVKAAVRFRGRAITHKELGREVLDRFAEEVKDLGTIETKP 154 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 155 KMEGRNMFMMVAP 167 >gi|313836584|gb|EFS74298.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA2] gi|314928094|gb|EFS91925.1| translation initiation factor IF-3 [Propionibacterium acnes HL044PA1] gi|314972094|gb|EFT16191.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA3] Length = 266 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 74 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 133 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 134 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 193 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 194 KQEGRNMLMILAP 206 >gi|256379477|ref|YP_003103137.1| translation initiation factor IF-3 [Actinosynnema mirum DSM 43827] gi|255923780|gb|ACU39291.1| translation initiation factor IF-3 [Actinosynnema mirum DSM 43827] Length = 204 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ + P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 45 LRLAQESDLDLVEVAAQARPPVCKLMDYGKYKYESAQKARESRRNQQLTVIKEQKLRPKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + FL G KVK+++ FRGRE +LG LL + E E+ ++ P Sbjct: 105 DPHDYQTKKGHVARFLGQGNKVKVTIMFRGREQSRPELGYRLLQRLAEDVAELGFVESNP 164 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 165 KQDGRNMIMVLAP 177 >gi|253577273|ref|ZP_04854592.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843387|gb|EES71416.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 164 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA + NLDLV + + P VC+I+D K RY QK EARK QK IKEV R I Sbjct: 30 LQMAMDLNLDLVNVAPTAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDIKEVWFRANI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ + FL+DG KVK SV+FRGREI H D+G+++L +K+ EIS ++ P Sbjct: 90 EEHDFQTKLRNVIKFLKDGDKVKCSVRFRGREITHADIGKKILDRVKDEVAEISNVERVP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ K Sbjct: 150 KLEGRSMIMILAPK 163 >gi|159037498|ref|YP_001536751.1| translation initiation factor IF-3 [Salinispora arenicola CNS-205] gi|157916333|gb|ABV97760.1| translation initiation factor IF-3 [Salinispora arenicola CNS-205] Length = 239 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 64 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 124 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEISELGYVEAAP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 184 KQDGRNMIMVLAP 196 >gi|294811660|ref|ZP_06770303.1| Translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] gi|294324259|gb|EFG05902.1| Translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] Length = 230 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 58 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 118 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 177 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 178 KQDGRNMIMVLGP 190 >gi|320011785|gb|ADW06635.1| translation initiation factor IF-3 [Streptomyces flavogriseus ATCC 33331] Length = 249 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E+ I+ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEELGFIESNP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLGP 196 >gi|210632539|ref|ZP_03297449.1| hypothetical protein COLSTE_01352 [Collinsella stercoris DSM 13279] gi|210159486|gb|EEA90457.1| hypothetical protein COLSTE_01352 [Collinsella stercoris DSM 13279] Length = 200 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLVEI + P VCK++D K +Y A +ARK Q +KE+K RP ID Sbjct: 53 RIADDQNLDLVEIAPNADPPVCKVMDYGKFKYQQAMKAKQARKNQSKVEVKEMKFRPKID 112 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 113 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPFATVESQPK 172 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 173 LEGRNMLMLLAP 184 >gi|209966089|ref|YP_002299004.1| translation initiation factor IF-3 InfC [Rhodospirillum centenum SW] gi|209959555|gb|ACJ00192.1| translation initiation factor IF-3 InfC [Rhodospirillum centenum SW] Length = 144 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 64/131 (48%), Positives = 94/131 (71%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVE+ + P VCKILD K +Y QK A EARKKQK +KEVK+RP ID H Sbjct: 14 AEEAGLDLVEVSPNADPPVCKILDYGKFKYEAQKKANEARKKQKIIEVKEVKLRPNIDDH 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D +K++ + FL +G KVK++++FRGRE+ HQDLG +L +++ ++++++ PK E Sbjct: 74 DYDIKMRNMRRFLEEGDKVKVTMRFRGREMAHQDLGMVILVKVRDTLEDLAKVEQMPKLE 133 Query: 124 GRQMIMILSSK 134 G+QMIM+L+ + Sbjct: 134 GKQMIMVLAPR 144 >gi|256832335|ref|YP_003161062.1| translation initiation factor IF-3 [Jonesia denitrificans DSM 20603] gi|256685866|gb|ACV08759.1| translation initiation factor IF-3 [Jonesia denitrificans DSM 20603] Length = 233 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA+LDLVE+ P VCK++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 52 LNLAQEADLDLVEVAPDSRPPVCKLMDYGKFKYESAMKAREARRNQANTVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 112 DDHDYGTKKGHVERFLSAGDKVKVMIMFRGREQSRPEMGIRLLQRLADDVAELGYVESSP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 172 KQDGRNMIMVLGP 184 >gi|255659699|ref|ZP_05405108.1| translation initiation factor IF-3 [Mitsuokella multacida DSM 20544] gi|260848273|gb|EEX68280.1| translation initiation factor IF-3 [Mitsuokella multacida DSM 20544] Length = 174 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVE+ P VC+I+D K RY QK EA+KKQK IKEVK+RP I Sbjct: 18 LRMAEEQHLDLVEVAPKAKPPVCRIMDFGKYRYEQQKREKEAKKKQKVINIKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK F+ +G KVK+++ FRGRE+ H +LG+E+LS + G+ I+ Sbjct: 78 EQHDFDVKLKNALRFVEEGNKVKVTIMFRGRELSHPELGKEVLSRVAAALGDAVSIERNA 137 Query: 121 KFEGRQMIMILSSKC 135 K EG+ M MI++ K Sbjct: 138 KLEGKNMTMIVAPKV 152 >gi|254439352|ref|ZP_05052846.1| translation initiation factor IF-3 [Octadecabacter antarcticus 307] gi|198254798|gb|EDY79112.1| translation initiation factor IF-3 [Octadecabacter antarcticus 307] Length = 137 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA EA LDLVEI + TP VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MQMADEAGLDLVEISPNATPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + + +++ P Sbjct: 61 DINDYDVKMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAADTTDQGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|54298705|ref|YP_125074.1| translation initiation factor IF-3 [Legionella pneumophila str. Paris] gi|61213079|sp|Q5X1H4|IF3_LEGPA RecName: Full=Translation initiation factor IF-3 gi|53752490|emb|CAH13922.1| Translation initiation factor IF-3 [Legionella pneumophila str. Paris] Length = 178 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 89/136 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ LDLVEI + P VC+I+D K + + K EARKKQK +KE+K RP Sbjct: 42 LRAAEESGLDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ Sbjct: 102 EDGDYQVKLRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAVVEQHA 161 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQ++M+LS K Sbjct: 162 KREGRQLLMVLSPKKT 177 >gi|299821796|ref|ZP_07053684.1| translation initiation factor IF3 [Listeria grayi DSM 20601] gi|299817461|gb|EFI84697.1| translation initiation factor IF3 [Listeria grayi DSM 20601] Length = 196 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 60 LGIAEKANLDLVLVAPNAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L ++S ++ + Sbjct: 120 DEHDFNTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFATECTDLSTVEQKA 179 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 180 KMDGRSMFLVLAP 192 >gi|78042833|ref|YP_360407.1| translation initiation factor IF-3 [Carboxydothermus hydrogenoformans Z-2901] gi|77994948|gb|ABB13847.1| translation initiation factor IF-3 [Carboxydothermus hydrogenoformans Z-2901] Length = 169 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D K RY K EARKKQK +KE+K+RP I Sbjct: 35 LKIAEEMELDLVEIAPTAKPPVCKIMDYGKYRYQQSKKEKEARKKQKIINVKEIKIRPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKL+ + FL DG KVK++V FRGRE+ H ++ ELL+ + + G I+ ++ Sbjct: 95 EEHDFQVKLRNVLRFLEDGDKVKVTVMFRGRELSHPEIAYELLNKMAQEVGSIAVVERPA 154 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 155 KLEGRNMIMILAPKS 169 >gi|255326345|ref|ZP_05367429.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296] gi|255296562|gb|EET75895.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296] Length = 233 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ + P VCK++D K +Y A E+RKKQ + +KE++ R I Sbjct: 52 LRLAEDAELDLVEVAPNAKPPVCKLMDYGKYKYEAAIKARESRKKQANAVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL + E+S ++ P Sbjct: 112 DTHDYETKVGHARRFLSGGDKVKAMIQFRGREQQRPEMGVRLLERLAAELAEVSTVESRP 171 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 172 RQDGRNMVMVLAP 184 >gi|213966331|ref|ZP_03394513.1| translation initiation factor IF-3 [Corynebacterium amycolatum SK46] gi|213951037|gb|EEB62437.1| translation initiation factor IF-3 [Corynebacterium amycolatum SK46] Length = 183 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP I Sbjct: 44 LKLAYEADLDLVEVAPRAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 104 DDHDYETKKNNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAADVEEYGTVESRP 163 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L Sbjct: 164 KQDGRNMTMVLGP 176 >gi|319637848|ref|ZP_07992614.1| translation initiation factor IF-3 [Neisseria mucosa C102] gi|317401003|gb|EFV81658.1| translation initiation factor IF-3 [Neisseria mucosa C102] Length = 155 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPKK 154 >gi|294340010|emb|CAZ88374.1| protein chain initiation factor IF-3 [Thiomonas sp. 3As] Length = 165 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ ++DLVEI + +P VC+++D K +Y QK EAR KQK IKEVK RP Sbjct: 29 LRLAEQHDVDLVEIAPTASPPVCRLMDYGKFKYEEQKKNHEARAKQKQIQIKEVKFRPAT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K K+S++FRGREI HQD+G +L +K ++ +++ P Sbjct: 89 DDGDYQIKLRNLRRFLEEGDKGKVSLRFRGREITHQDIGMRVLERVKADVEDVGQVEQMP 148 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM++S K Sbjct: 149 KLEGRQMIMVISPKK 163 >gi|163857145|ref|YP_001631443.1| translation initiation factor IF-3 [Bordetella petrii DSM 12804] gi|163260873|emb|CAP43175.1| translation initiation factor IF-3 [Bordetella petrii] Length = 165 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +++++A++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQADVDLVEIAPNADPPVCRLMDYGKFKYQEQKRQAEARAKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLTELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ + Sbjct: 141 LEGRQMVMVLAPRK 154 >gi|297626570|ref|YP_003688333.1| Translation initiation factor IF-3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922335|emb|CBL56907.1| Translation initiation factor IF-3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 237 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P VCK++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 43 LQLAREHDLDLVEVAPGARPPVCKLMDYGKFKYENAQKARESRRNQSNTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E + ++ P Sbjct: 103 DGHDYETKKGHVVRFLRGGDKVKITIMFRGREQSRPELGFNLLRRLAEDVSDDGVVEQSP 162 Query: 121 KFEGRQMIMILSS 133 K EGR M M+LS Sbjct: 163 KQEGRNMHMVLSP 175 >gi|330467000|ref|YP_004404743.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032] gi|328809971|gb|AEB44143.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032] Length = 220 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITELGYVESAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|169831542|ref|YP_001717524.1| translation initiation factor IF-3 [Candidatus Desulforudis audaxviator MP104C] gi|169638386|gb|ACA59892.1| translation initiation factor IF-3 [Candidatus Desulforudis audaxviator MP104C] Length = 187 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ S P VC+I+D K +Y K EARKKQ+ IKEVK+RP I Sbjct: 50 LRLAEEKGLDLVEVASQARPVVCRIMDFGKYKYEQSKRDKEARKKQRIITIKEVKLRPGI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K + FL+DG KVK+++ FRGREI+H LG++LL + E+ E++ I+ P Sbjct: 110 EDHDFQTKARNAVRFLKDGDKVKVTLVFRGREIVHPHLGQQLLKKLAEQVEELAVIERAP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR MIMIL+ + Sbjct: 170 KLEGRNMIMILAPR 183 >gi|226227284|ref|YP_002761390.1| translation initiation factor IF-3 [Gemmatimonas aurantiaca T-27] gi|226090475|dbj|BAH38920.1| translation initiation factor IF-3 [Gemmatimonas aurantiaca T-27] Length = 186 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVE+ ++ P V +I+D K ++ K A A+KKQ +KEVK RP I Sbjct: 53 LSMAVELGLDLVEVAAAARPPVVRIMDYGKFKFEQAKQARLAKKKQHVIHLKEVKYRPGI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL +G KVK+++ FRGR+I H +LG+ ++ + + ++++I+ P Sbjct: 113 DDHDFETKTRHARRFLEEGNKVKVTLMFRGRQIAHPELGKIVVERVSQELADLAKIESAP 172 Query: 121 KFEGRQMIMILSSK 134 EG+ M MIL+ K Sbjct: 173 TMEGKSMTMILAPK 186 >gi|260424667|ref|ZP_05732874.2| translation initiation factor IF-3 [Dialister invisus DSM 15470] gi|260402756|gb|EEW96303.1| translation initiation factor IF-3 [Dialister invisus DSM 15470] Length = 172 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++E LDLVE+ + P VC+I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 38 IRLSEEKGLDLVEVAPNGKPPVCRIMNYGKYRYEQQKRDKEAKKKQKVFQLKEVKLRPNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL DG KVK+++ FRGRE+ H +LG E+L + G+ + P Sbjct: 98 EDHDFYVKLKNAQRFLADGNKVKVTIMFRGREMTHPELGGEVLERFAKELGDSIVREKPP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M++ K Sbjct: 158 KLEGRNMTMVVGPKA 172 >gi|54295555|ref|YP_127970.1| translation initiation factor IF-3 [Legionella pneumophila str. Lens] gi|61213076|sp|Q5WT83|IF3_LEGPL RecName: Full=Translation initiation factor IF-3 gi|53755387|emb|CAH16883.1| Translation initiation factor IF-3 [Legionella pneumophila str. Lens] Length = 178 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 89/136 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ LDLVEI + P VC+I+D K + + K EARKKQK +KE+K RP Sbjct: 42 LRAAEESGLDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ Sbjct: 102 EDGDYQVKLRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHA 161 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQ++M+LS K Sbjct: 162 KREGRQLLMVLSPKKT 177 >gi|86137521|ref|ZP_01056098.1| translation initiation factor [Roseobacter sp. MED193] gi|85825856|gb|EAQ46054.1| translation initiation factor [Roseobacter sp. MED193] Length = 137 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 67/133 (50%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA EA LDLVEI + TP VCKI+D K +Y QK EARKKQK +KEVK RP Sbjct: 1 MDMANEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKRESEARKKQKIIEVKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL G KVKI+++FRGRE+ HQ+LGR+LL + E ++ +++ P Sbjct: 61 DTNDYSVKMRNVFKFLEAGDKVKITLRFRGREMAHQNLGRQLLERVAEDVKDMGKVENMP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMMIGP 133 >gi|149926878|ref|ZP_01915137.1| Initiation factor 3 [Limnobacter sp. MED105] gi|149824430|gb|EDM83648.1| Initiation factor 3 [Limnobacter sp. MED105] Length = 156 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +DLVEI P V K++D K RY QK A EA+ KQK IKE+K RP Sbjct: 20 LRMAEEGGVDLVEIAPQAVPPVAKLMDYGKFRYQEQKKAAEAKSKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K K++++FRGRE+ HQD+G LL ++ EI +++ P Sbjct: 80 DDGDYNVKLRNLTRFLEDGDKCKVTLRFRGREMAHQDIGARLLERVRTDLEEIGQVEQMP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ + Sbjct: 140 KMEGRQMVMMIAPRK 154 >gi|326387119|ref|ZP_08208729.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens DSM 19370] gi|326208300|gb|EGD59107.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens DSM 19370] Length = 159 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K RY QK A ARK Q++ IKE+KMRP I Sbjct: 26 IEQAAEVGLDLVEVSPNADPPVCKFLDVGKYRYEAQKKANAARKTQRTQEIKEIKMRPNI 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKL+ + F+ +G KVK++++FRGRE+ HQ LG LL +++ EI++++ P Sbjct: 86 DDHDYDVKLRNVHRFIEEGDKVKVTLRFRGRELSHQQLGMNLLRRVQDDVAEIAKVEAFP 145 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+LS K Sbjct: 146 RMEGRQMLMVLSPK 159 >gi|313808092|gb|EFS46569.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA2] Length = 278 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 85 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 144 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 145 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 204 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 205 KQEGRNMLMILAP 217 >gi|194017400|ref|ZP_03056012.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061] gi|194011268|gb|EDW20838.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061] Length = 154 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +ANLDLV + ++ P VC+I+D K R+ QK EARK QK +KEV++ P I Sbjct: 18 LEIATKANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKDKEARKNQKIISLKEVRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ +P Sbjct: 78 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKP 137 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 138 KMDGRSMFLMLAPKV 152 >gi|298369383|ref|ZP_06980701.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014 str. F0314] gi|298283386|gb|EFI24873.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014 str. F0314] Length = 155 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPKK 154 >gi|153008139|ref|YP_001369354.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC 49188] gi|166198960|sp|A6WX21|IF3_OCHA4 RecName: Full=Translation initiation factor IF-3 gi|151560027|gb|ABS13525.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC 49188] Length = 178 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 75/134 (55%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 45 IAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 105 DTHDYEVKMKAALRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 165 KLEGRQMMMVLAPR 178 >gi|29833279|ref|NP_827913.1| translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] gi|39931256|sp|Q828D2|IF3_STRAW RecName: Full=Translation initiation factor IF-3 gi|29610401|dbj|BAC74448.1| putative translation initiation factor IF-3 [Streptomyces avermitilis MA-4680] Length = 241 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLATDVEDLGFVESSP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|154245880|ref|YP_001416838.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2] gi|238686715|sp|A7IGN8|IF3_XANP2 RecName: Full=Translation initiation factor IF-3 gi|154159965|gb|ABS67181.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2] Length = 174 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 70/134 (52%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA LDLVEI + P VCKILD + +Y QK A EARKKQK +KE+K+RP I Sbjct: 41 LTLAQEAGLDLVEISPNSAPPVCKILDYGRFKYQNQKKASEARKKQKVVEVKEIKLRPGI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+++++ F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP Sbjct: 101 DTHDYEVKMRSMERFFEEGDKVKVTLRFRGREMAHQDIGFKLLQKLKEDVAAIAKVEAEP 160 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMILS + Sbjct: 161 MLEGRQMIMILSPR 174 >gi|62290957|ref|YP_222750.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str. 9-941] gi|61226333|sp|P0A3K8|IF3_BRUME RecName: Full=Translation initiation factor IF-3 gi|61226334|sp|P0A3K9|IF3_BRUSU RecName: Full=Translation initiation factor IF-3 gi|61226336|sp|P0A3L0|IF3_BRUAB RecName: Full=Translation initiation factor IF-3 gi|7105706|gb|AAF05835.2|AF196569_1 translation initiation factor 3 [Brucella abortus] gi|62197089|gb|AAX75389.1| InfC, translation initiation factor IF-3 [Brucella abortus bv. 1 str. 9-941] Length = 178 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 45 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 105 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 165 KLEGRQMMMVLAPR 178 >gi|255262498|ref|ZP_05341840.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62] gi|255104833|gb|EET47507.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62] Length = 136 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 67/133 (50%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA +A LDLVEI + +P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MDMAVDAGLDLVEISPNASPPVCKIMDFGKFKYETQKKEAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E +++ P Sbjct: 61 DTNDYDVKMRNVFKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEYGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|46203017|ref|ZP_00052215.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 173 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEAGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 100 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|121637549|ref|YP_977772.1| translation initiation factor IF-3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990024|ref|YP_002644711.1| putative initiation factor IF-3 [Mycobacterium bovis BCG str. Tokyo 172] gi|121493196|emb|CAL71667.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773137|dbj|BAH25943.1| putative initiation factor IF-3 [Mycobacterium bovis BCG str. Tokyo 172] Length = 201 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 95 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|323137355|ref|ZP_08072433.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242] gi|322397342|gb|EFX99865.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242] Length = 175 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA A LDLVEI + TP VCKILD + R+ QK A EARKKQK +KE+K+RP I Sbjct: 42 LAMADSAGLDLVEIAPNSTPPVCKILDYGRFRFAEQKKAAEARKKQKVVEVKEIKLRPGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGREI HQD+G LL+ +K +++++ EP Sbjct: 102 DEHDYDVKMKAVRRFFEEGDKVKVTLRFRGREIAHQDIGYRLLTRVKAETANLAKVELEP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 162 SMEGRQMVMVLAPR 175 >gi|315444462|ref|YP_004077341.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. Spyr1] gi|315262765|gb|ADT99506.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium sp. Spyr1] Length = 203 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 95 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADYGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|300691316|ref|YP_003752311.1| translation initiation factor IF-3 [Ralstonia solanacearum PSI07] gi|299078376|emb|CBJ51026.1| Translation initiation factor IF-3 [Ralstonia solanacearum PSI07] Length = 178 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRTKITLRFRGREMAHQEIGVRMLDRLKADLEEFGQVEQMP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 162 KMEGRQMVMMLAPKK 176 >gi|17546297|ref|NP_519699.1| translation initiation factor protein [Ralstonia solanacearum GMI1000] gi|20138471|sp|Q8XZ28|IF3_RALSO RecName: Full=Translation initiation factor IF-3 gi|17428594|emb|CAD15280.1| probable translation initiation factor if-3 protein [Ralstonia solanacearum GMI1000] Length = 178 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRTKITLRFRGREMAHQEIGARMLDRLKTDLEEFGQVEQMP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 162 KMEGRQMVMMLAPKK 176 >gi|56751447|ref|YP_172148.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 6301] gi|81298876|ref|YP_399084.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 7942] gi|56686406|dbj|BAD79628.1| translation initiation factor IF-3 [Synechococcus elongatus PCC 6301] gi|81167757|gb|ABB56097.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus elongatus PCC 7942] Length = 184 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 47 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKRAREARKKQHNVEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H DL ++LL + E+ + P Sbjct: 107 DEHDYQVRVNQAQRFLKAGDKVKATITFRGREIQHTDLAQQLLMRLASDLKELGEVQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M+L K Sbjct: 167 KKEGRNMMMMLGPKKA 182 >gi|284006266|emb|CBA71502.1| translation initiation factor IF-3 [Arsenophonus nasoniae] Length = 171 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQ+ +KE+K RP Sbjct: 35 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSLKEQKKKQRVIQVKEIKFRPGT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ IK ++S ++ P Sbjct: 95 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIDMLNRIKNDLDDMSVVESFP 154 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 155 SKIEGRQMIMVLAPKK 170 >gi|118466944|ref|YP_882311.1| translation initiation factor IF-3 [Mycobacterium avium 104] gi|254775577|ref|ZP_05217093.1| translation initiation factor IF-3 [Mycobacterium avium subsp. avium ATCC 25291] gi|118168231|gb|ABK69128.1| translation initiation factor IF-3 [Mycobacterium avium 104] Length = 173 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|121605746|ref|YP_983075.1| translation initiation factor IF-3 [Polaromonas naphthalenivorans CJ2] gi|120594715|gb|ABM38154.1| bacterial translation initiation factor 3 (bIF-3) [Polaromonas naphthalenivorans CJ2] Length = 174 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI + P VC+++D K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEISPTAVPPVCRLMDYGKFKYAEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLDDGDKCKITLRFRGREITHQELGLALLARIRDELADLILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 144 KLEGRQMVMMIAP 156 >gi|187477892|ref|YP_785916.1| translation initiation factor IF-3 [Bordetella avium 197N] gi|115422478|emb|CAJ49003.1| translation initiation factor IF-3 [Bordetella avium 197N] Length = 165 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 92/134 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +++++A++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQADVDLVEIAPNADPPVCRLMDFGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLTELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ K Sbjct: 141 LEGRQMVMVLAPKK 154 >gi|255019924|ref|ZP_05291998.1| Translation initiation factor 3 [Acidithiobacillus caldus ATCC 51756] gi|254970583|gb|EET28071.1| Translation initiation factor 3 [Acidithiobacillus caldus ATCC 51756] Length = 145 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ A+LDLVEI P VC+I+D K R+ K EAR+KQK + +KE+K RP Sbjct: 10 LAAAESADLDLVEIAPQANPPVCRIMDYGKYRFQESKRQHEARRKQKQSQVKEIKFRPRT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ I FL DG +VKI+++FRGRE+ H +LG E+L+ +++ E+ ++ P Sbjct: 70 DDADYQIKLRNIVRFLEDGDRVKITLRFRGREMTHPELGMEVLNRVEKDLLEMGVVEQRP 129 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 130 RMEGRQMVMVIAPRK 144 >gi|121610034|ref|YP_997841.1| translation initiation factor IF-3 [Verminephrobacter eiseniae EF01-2] gi|121554674|gb|ABM58823.1| bacterial translation initiation factor 3 (bIF-3) [Verminephrobacter eiseniae EF01-2] Length = 179 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ+LG LL+ I++ ++ ++ P Sbjct: 84 DDGDYHIKMRNIRRFLADGDKCKITLRFRGREITHQELGLALLNRIRDELADVIIVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|218529881|ref|YP_002420697.1| translation initiation factor IF-3 [Methylobacterium chloromethanicum CM4] gi|240138185|ref|YP_002962657.1| Translation initiation factor IF-3 [Methylobacterium extorquens AM1] gi|254560745|ref|YP_003067840.1| translation initiation factor IF-3 [Methylobacterium extorquens DM4] gi|259491507|sp|B7KV98|IF3_METC4 RecName: Full=Translation initiation factor IF-3 gi|218522184|gb|ACK82769.1| translation initiation factor IF-3 [Methylobacterium chloromethanicum CM4] gi|240008154|gb|ACS39380.1| Translation initiation factor IF-3 [Methylobacterium extorquens AM1] gi|254268023|emb|CAX23894.1| Translation initiation factor IF-3 [Methylobacterium extorquens DM4] Length = 173 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 100 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|15608779|ref|NP_216157.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Rv] gi|31792828|ref|NP_855321.1| translation initiation factor IF-3 [Mycobacterium bovis AF2122/97] gi|148822849|ref|YP_001287603.1| translation initiation factor IF-3 [Mycobacterium tuberculosis F11] gi|298525139|ref|ZP_07012548.1| initiation factor IF-3 infC [Mycobacterium tuberculosis 94_M4241A] gi|54037380|sp|P65136|IF3_MYCBO RecName: Full=Translation initiation factor IF-3 gi|54041110|sp|P65135|IF3_MYCTU RecName: Full=Translation initiation factor IF-3 gi|3261719|emb|CAB06651.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium tuberculosis H37Rv] gi|31618418|emb|CAD96336.1| PROBABLE INITIATION FACTOR IF-3 INFC [Mycobacterium bovis AF2122/97] gi|148721376|gb|ABR06001.1| initiation factor IF-3 infC [Mycobacterium tuberculosis F11] gi|298494933|gb|EFI30227.1| initiation factor IF-3 infC [Mycobacterium tuberculosis 94_M4241A] gi|323719902|gb|EGB29015.1| initiation factor IF-3 infC [Mycobacterium tuberculosis CDC1551A] gi|326903256|gb|EGE50189.1| initiation factor IF-3 infC [Mycobacterium tuberculosis W-148] Length = 201 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 35 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 95 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|308049558|ref|YP_003913124.1| bacterial translation initiation factor 3 (bIF-3) [Ferrimonas balearica DSM 9799] gi|307631748|gb|ADN76050.1| bacterial translation initiation factor 3 (bIF-3) [Ferrimonas balearica DSM 9799] Length = 172 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA A LDLVEI + P VC+++D K Y K A E RKK K +KE+K RP Sbjct: 36 LDMAAAAELDLVEISPNAEPPVCRVMDYGKFLYEKSKAANEQRKKTKQIQVKELKFRPGT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G KVK++++FRGRE+ HQ LG +LL+ IK+ E+++++ P Sbjct: 96 DVGDYQVKLRNLVRFLEEGDKVKVTLRFRGREMAHQQLGFDLLNRIKDDTAELAQVESFP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ IM+L+ K Sbjct: 156 KMEGRQAIMVLAPKK 170 >gi|241758599|ref|ZP_04756714.1| translation initiation factor IF-3 [Neisseria flavescens SK114] gi|241321251|gb|EER57423.1| translation initiation factor IF-3 [Neisseria flavescens SK114] Length = 155 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPKK 154 >gi|226306782|ref|YP_002766742.1| translation initiation factor IF-3 [Rhodococcus erythropolis PR4] gi|226185899|dbj|BAH34003.1| translation initiation factor IF-3 [Rhodococcus erythropolis PR4] Length = 219 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 35 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 95 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADLGFVETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|149912409|ref|ZP_01900952.1| translation initiation factor IF-3 [Moritella sp. PE36] gi|149804512|gb|EDM64601.1| translation initiation factor IF-3 [Moritella sp. PE36] Length = 146 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVEI + P VC+++D K Y K+ E +KKQ +KE+K RP Sbjct: 11 LAIAEEANLDLVEISPNAEPPVCRVMDYGKFIYEKSKSVKEQKKKQVRVQVKEIKFRPGT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G K KI+++FRGRE+ HQ LG +LL+ IKE EI+ ++ P Sbjct: 71 DIGDYQVKLRNLTRFLEEGNKAKITLRFRGREMAHQSLGFDLLNRIKEDLKEIAVVEAFP 130 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 131 KMEGRQAVMVLAPKK 145 >gi|188580866|ref|YP_001924311.1| translation initiation factor IF-3 [Methylobacterium populi BJ001] gi|259491508|sp|B1ZGB8|IF3_METPB RecName: Full=Translation initiation factor IF-3 gi|179344364|gb|ACB79776.1| translation initiation factor IF-3 [Methylobacterium populi BJ001] Length = 173 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 40 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ E+++++ EP Sbjct: 100 DKHDYDVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEVAKVESEP 159 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 160 MLEGRQMIMILAPR 173 >gi|254452075|ref|ZP_05065512.1| translation initiation factor IF-3 [Octadecabacter antarcticus 238] gi|198266481|gb|EDY90751.1| translation initiation factor IF-3 [Octadecabacter antarcticus 238] Length = 137 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 92/133 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMA+EA LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP Sbjct: 1 MQMAEEAGLDLVEISPNAAPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ + FL +G KVK++++FRGRE+ HQ+LGRELL + E E +++ P Sbjct: 61 DINDYDVKMRNVYKFLENGDKVKVTLRFRGREMAHQNLGRELLERVAEDTKEQGKVENFP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M++ Sbjct: 121 KMEGRQMVMLIGP 133 >gi|15841097|ref|NP_336134.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CDC1551] gi|219557560|ref|ZP_03536636.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T17] gi|253799319|ref|YP_003032320.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 1435] gi|254364490|ref|ZP_04980536.1| initiation factor IF-3 infC [Mycobacterium tuberculosis str. Haarlem] gi|289745921|ref|ZP_06505299.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|289761792|ref|ZP_06521170.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|294996591|ref|ZP_06802282.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 210] gi|308231896|ref|ZP_07414165.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu001] gi|308369492|ref|ZP_07417978.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu002] gi|308370782|ref|ZP_07422694.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu003] gi|308372018|ref|ZP_07427063.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu004] gi|308373202|ref|ZP_07431379.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu005] gi|308374364|ref|ZP_07435760.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu006] gi|308375635|ref|ZP_07444587.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu007] gi|308376779|ref|ZP_07440005.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu008] gi|308377786|ref|ZP_07480397.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu009] gi|308378998|ref|ZP_07484595.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu010] gi|308380137|ref|ZP_07488820.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu011] gi|308401002|ref|ZP_07493335.2| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu012] gi|13881312|gb|AAK45948.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CDC1551] gi|134150004|gb|EBA42049.1| initiation factor IF-3 infC [Mycobacterium tuberculosis str. Haarlem] gi|253320822|gb|ACT25425.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 1435] gi|289686449|gb|EFD53937.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|289709298|gb|EFD73314.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|308215743|gb|EFO75142.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu001] gi|308327410|gb|EFP16261.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu002] gi|308330920|gb|EFP19771.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu003] gi|308334690|gb|EFP23541.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu004] gi|308338532|gb|EFP27383.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu005] gi|308342202|gb|EFP31053.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu006] gi|308345728|gb|EFP34579.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu007] gi|308350028|gb|EFP38879.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu008] gi|308354665|gb|EFP43516.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu009] gi|308358621|gb|EFP47472.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu010] gi|308362547|gb|EFP51398.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu011] gi|308366167|gb|EFP55018.1| initiation factor IF-3 infC [Mycobacterium tuberculosis SUMu012] gi|328459070|gb|AEB04493.1| initiation factor IF-3 infC [Mycobacterium tuberculosis KZN 4207] Length = 184 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 18 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 78 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 137 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 138 KQDGRNMTMVLAP 150 >gi|294628445|ref|ZP_06707005.1| translation initiation factor IF-3 [Streptomyces sp. e14] gi|292831778|gb|EFF90127.1| translation initiation factor IF-3 [Streptomyces sp. e14] Length = 224 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|296133380|ref|YP_003640627.1| translation initiation factor IF-3 [Thermincola sp. JR] gi|296031958|gb|ADG82726.1| translation initiation factor IF-3 [Thermincola potens JR] Length = 173 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE +LDLVE+ S P VC+I+D K +Y K EARKKQK +KE+K+RP I Sbjct: 38 LRFAQEKDLDLVEVAPSAKPPVCRIMDYGKYKYEQSKREKEARKKQKIINVKEIKLRPNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K I FL+DG KVK++V FRGRE+ H DLG++LL + ++ +I+ ++ +P Sbjct: 98 EAHDLVTKTNNIVRFLKDGDKVKVTVMFRGREMAHTDLGKQLLDKVVDQLKDITIVERQP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR M+MIL+ K Sbjct: 158 KVEGRNMVMILAPK 171 >gi|59800744|ref|YP_207456.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA 1090] gi|121634518|ref|YP_974763.1| translation initiation factor IF-3 [Neisseria meningitidis FAM18] gi|218767843|ref|YP_002342355.1| translation initiation factor IF-3 [Neisseria meningitidis Z2491] gi|54037381|sp|P65138|IF3_NEIMB RecName: Full=Translation initiation factor IF-3 gi|54041111|sp|P65137|IF3_NEIMA RecName: Full=Translation initiation factor IF-3 gi|75507420|sp|Q5F9U3|IF3_NEIG1 RecName: Full=Translation initiation factor IF-3 gi|166198958|sp|A1KSY3|IF3_NEIMF RecName: Full=Translation initiation factor IF-3 gi|59717639|gb|AAW89044.1| putative translation initiation factor IF-3 [Neisseria gonorrhoeae FA 1090] gi|120866224|emb|CAM09964.1| putative translation initiation factor IF-3 [Neisseria meningitidis FAM18] gi|121051851|emb|CAM08157.1| putative translation initiation factor IF-3 [Neisseria meningitidis Z2491] Length = 173 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 38 LAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 98 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 158 KMEGRQMVMMIAPKK 172 >gi|290961732|ref|YP_003492914.1| translation initiation factor IF-3 [Streptomyces scabiei 87.22] gi|260651258|emb|CBG74380.1| translation initiation factor IF-3 [Streptomyces scabiei 87.22] Length = 232 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLASDVEDLGFVESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|261855918|ref|YP_003263201.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus c2] gi|261836387|gb|ACX96154.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus c2] Length = 190 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 89/136 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E LDLVE+ ++ P VCKI+D K ++ K EARKKQK +KE+K RP Sbjct: 54 LDRAAEVELDLVEVAANANPPVCKIMDYGKFKFQQSKKLAEARKKQKQIEVKEIKFRPGT 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK+++I FL +G KVKI+++FRGRE+ H+++ LL I++ E++ ++ P Sbjct: 114 EDHDYQVKMRSILRFLEEGDKVKITLRFRGREMAHKEVAGVLLDRIEQDLIELATVEQRP 173 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQ+ M+LS K Sbjct: 174 KMEGRQVTMVLSPKKT 189 >gi|219850024|ref|YP_002464457.1| translation initiation factor IF-3 [Chloroflexus aggregans DSM 9485] gi|219544283|gb|ACL26021.1| translation initiation factor IF-3 [Chloroflexus aggregans DSM 9485] Length = 252 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E DLVE+ + P VC++LD K RY K EAR+ QK + +K++++ P Sbjct: 35 LAMAEERGYDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARRNQKQSELKQIRLMPKT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+ VK FL G KVK +++FRGRE+ H ++GR++L I E+ +I+ I+ +P Sbjct: 95 DDHDVAVKANQARRFLLAGDKVKFNLRFRGREVAHPEIGRKMLDEIAEQLSDIAIIEQKP 154 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+L+ Sbjct: 155 LMEGRVLSMLLAPNA 169 >gi|183982462|ref|YP_001850753.1| initiation factor IF-3 InfC [Mycobacterium marinum M] gi|183175788|gb|ACC40898.1| initiation factor IF-3 InfC [Mycobacterium marinum M] Length = 167 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|120611522|ref|YP_971200.1| translation initiation factor 3 [Acidovorax citrulli AAC00-1] gi|120589986|gb|ABM33426.1| bacterial translation initiation factor 3 (bIF-3) [Acidovorax citrulli AAC00-1] Length = 173 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLVDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ++G LL+ I++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQEIGLALLNRIRDDLGDTIVVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|163851051|ref|YP_001639094.1| translation initiation factor IF-3 [Methylobacterium extorquens PA1] gi|163662656|gb|ABY30023.1| translation initiation factor IF-3 [Methylobacterium extorquens PA1] Length = 176 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VCK LD + R+ QK EARK+QK+ +KE+K+RP I Sbjct: 43 LAMAEEVGLDLVEIAPNSVPPVCKFLDYGRFRFNEQKKQNEARKRQKTVEVKEIKLRPGI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G LL +K+ EI++++ EP Sbjct: 103 DKHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGLRLLERVKQETQEIAKVESEP 162 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 163 MLEGRQMIMILAPR 176 >gi|294501488|ref|YP_003565188.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551] gi|295706836|ref|YP_003599911.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319] gi|294351425|gb|ADE71754.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551] gi|294804495|gb|ADF41561.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319] Length = 167 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + ++ P VC+I+D K RY Q+ EARK QK +KEV++ P I Sbjct: 31 LEIASRVNLDLVMVAANAKPPVCRIMDYGKFRYEQQRKEREARKNQKVVNLKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+ +G+++L + ++S ++ P Sbjct: 91 DEHDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKGIGQKVLERFSQACEDVSSVESAP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L+ K Sbjct: 151 KMEGRSMFLVLAPK 164 >gi|291009827|ref|ZP_06567800.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] Length = 168 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 23 LRLAQEADLDLVEVAPQARPPVCKLMDYGKFKYESAQKARESRRNQQQTVIKEQKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ I+ P Sbjct: 83 DPHDYETKKGHVSRFLGQGHKVKVTIMFRGREQSRPELGFRLLQRLADDVSELGFIEANP 142 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 143 KQDGRNMIMVLAP 155 >gi|134101784|ref|YP_001107445.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] gi|133914407|emb|CAM04520.1| translation initiation factor IF3 protein [Saccharopolyspora erythraea NRRL 2338] Length = 163 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 18 LRLAQEADLDLVEVAPQARPPVCKLMDYGKFKYESAQKARESRRNQQQTVIKEQKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ I+ P Sbjct: 78 DPHDYETKKGHVSRFLGQGHKVKVTIMFRGREQSRPELGFRLLQRLADDVSELGFIEANP 137 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 138 KQDGRNMIMVLAP 150 >gi|119716685|ref|YP_923650.1| translation initiation factor 3 [Nocardioides sp. JS614] gi|119537346|gb|ABL81963.1| bacterial translation initiation factor 3 (bIF-3) [Nocardioides sp. JS614] Length = 243 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVEI P VCK++D K +Y + A EAR+ Q + IKE+K+RP I Sbjct: 51 LKLAQEADLDLVEIAPQGKPPVCKLMDYGKFKYENAQKAREARRNQTNVIIKEMKLRPKI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 111 DAHDYETKKGHVVRFLRAGDKVKITIMFRGREQHRPELGFRLLQRLAEDVTELGFVESAP 170 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 171 KQDGRNMIMVLGP 183 >gi|158426068|ref|YP_001527360.1| translation initiation factor IF-3 [Azorhizobium caulinodans ORS 571] gi|172047848|sp|A8HWL0|IF3_AZOC5 RecName: Full=Translation initiation factor IF-3 gi|158332957|dbj|BAF90442.1| translation initiation factor 3 [Azorhizobium caulinodans ORS 571] Length = 174 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 71/134 (52%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA LDLVEI + +P VCKILD + +Y QK A EARKKQK +KE+K+RP I Sbjct: 41 LLLAQEAGLDLVEISPNSSPPVCKILDFGRFKYQNQKKASEARKKQKVVEVKEIKLRPGI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP Sbjct: 101 DTHDYDVKMKAMLRFFEEGDKVKVTLRFRGREMAHQDIGYKLLQKLKEDVTNIAKVEAEP 160 Query: 121 KFEGRQMIMILSSK 134 EGRQMIMIL+ + Sbjct: 161 MLEGRQMIMILAPR 174 >gi|154500000|ref|ZP_02038038.1| hypothetical protein BACCAP_03657 [Bacteroides capillosus ATCC 29799] gi|150271598|gb|EDM98855.1| hypothetical protein BACCAP_03657 [Bacteroides capillosus ATCC 29799] Length = 200 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLV+I + P VCK++D K ++ QK EARK Q+ IKEV+M P I Sbjct: 60 LEKAMEQGLDLVKISPTAVPPVCKLMDYGKFKFEQQKREKEARKNQRVVEIKEVRMSPGI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VK++ FL DG +VK++V+FRGRE+ H ++G++LL E+ E++ +D +P Sbjct: 120 DVNDFNVKVRNAQKFLADGDRVKVTVRFRGREMAHTEIGKDLLLKFAEQCAEVATLDKDP 179 Query: 121 KFEGRQMIMILSSKC 135 K +GR M + LSSK Sbjct: 180 KLDGRHMSIFLSSKV 194 >gi|462398|sp|P33319|IF3_PROVU RecName: Full=Translation initiation factor IF-3 gi|150892|gb|AAC36812.1| translation initiation factor IF3 [Proteus vulgaris] Length = 179 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K E +K+QK +KEVK RP Sbjct: 43 LEKAEEAGADLVEISPNAEPPVCRIMDYGKFLYEKSKTLKEQKKEQKVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ I++ E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIRQDLDELATVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 NKIEGRQMIMVLAPKK 178 >gi|15676619|ref|NP_273763.1| translation initiation factor IF-3 [Neisseria meningitidis MC58] gi|254493204|ref|ZP_05106375.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291] gi|268594344|ref|ZP_06128511.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|268596340|ref|ZP_06130507.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|268598467|ref|ZP_06132634.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|268600820|ref|ZP_06134987.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|268603125|ref|ZP_06137292.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|268681606|ref|ZP_06148468.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|268683834|ref|ZP_06150696.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|268686075|ref|ZP_06152937.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|291044370|ref|ZP_06570079.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|293399556|ref|ZP_06643709.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62] gi|313668801|ref|YP_004049085.1| translation initiation factor IF-3 [Neisseria lactamica ST-640] gi|7225947|gb|AAF41134.1| translation initiation factor 3 [Neisseria meningitidis MC58] gi|226512244|gb|EEH61589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291] gi|261392910|emb|CAX50491.1| translation initiation factor IF-3 [Neisseria meningitidis 8013] gi|268547733|gb|EEZ43151.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|268550128|gb|EEZ45147.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|268582598|gb|EEZ47274.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|268584951|gb|EEZ49627.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|268587256|gb|EEZ51932.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|268621890|gb|EEZ54290.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|268624118|gb|EEZ56518.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|268626359|gb|EEZ58759.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|291011264|gb|EFE03260.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|291610125|gb|EFF39247.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62] gi|313006263|emb|CBN87725.1| putative translation initiation factor IF-3 [Neisseria lactamica 020-06] gi|325131826|gb|EGC54526.1| translation initiation factor IF-3 [Neisseria meningitidis M6190] gi|325136056|gb|EGC58666.1| translation initiation factor IF-3 [Neisseria meningitidis M0579] gi|325140124|gb|EGC62653.1| translation initiation factor IF-3 [Neisseria meningitidis CU385] gi|325144076|gb|EGC66384.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240013] gi|325206437|gb|ADZ01890.1| translation initiation factor IF-3 [Neisseria meningitidis M04-240196] gi|325207765|gb|ADZ03217.1| translation initiation factor IF-3 [Neisseria meningitidis NZ-05/33] Length = 155 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 20 LAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 80 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMIAPKK 154 >gi|221638348|ref|YP_002524610.1| translation initiation factor IF-3 [Rhodobacter sphaeroides KD131] gi|332560369|ref|ZP_08414691.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N] gi|221159129|gb|ACM00109.1| Translation initiation factor IF-3 [Rhodobacter sphaeroides KD131] gi|332278081|gb|EGJ23396.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N] Length = 136 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+D K +Y QK EARKKQ IKE+K RP Sbjct: 1 MMMAEEAGLDLVEISPNAEPPVCKIMDFGKFKYEQQKREAEARKKQHIIEIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRIDC 118 D HD VK++++ FL +G KVK++++FRGRE+ HQ+LG ELL+ + E +++ Sbjct: 61 DTHDYDVKMRSVLKFLSEGDKVKVTLRFRGREMAHQELGLELLNRVAAHVSEAEAGKVEA 120 Query: 119 EPKFEGRQMIMILSSK 134 PK EGRQM+M+++ K Sbjct: 121 MPKLEGRQMVMMIAPK 136 >gi|258544547|ref|ZP_05704781.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC 15826] gi|258520178|gb|EEV89037.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC 15826] Length = 135 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E +LDLVE+ ++ P VC+I+D K R+ QK EARK QK IKE+K RP Sbjct: 1 MNAAYEQDLDLVEVAANAAPPVCRIMDYGKFRFEQQKKQQEARKNQKRIQIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ ++ FL DG K K++V+FRGRE+ HQ LG+ELL+ I+ E+ ++ + Sbjct: 61 DEGDYQVKLRNLNRFLADGDKAKVTVRFRGREMAHQGLGQELLTRIEADLAEVGVVEQKA 120 Query: 121 KFEGRQMIMILSSKC 135 EGRQM+M+ + K Sbjct: 121 GMEGRQMVMVFAPKK 135 >gi|88810666|ref|ZP_01125923.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231] gi|88792296|gb|EAR23406.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231] Length = 177 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+D + P VC++++ K ++ K ARKKQK IKEVK RP Sbjct: 40 LNSAEEAGLDLVELDGNADPPVCRVMNYGKWKFEQSKKQQAARKKQKQVQIKEVKFRPGT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVK++++FRGRE+ HQ+LG ELL ++ E+ I+ P Sbjct: 100 DEGDYQVKLRNLKRFLEDGDKVKVTLRFRGREMAHQELGLELLERVESDLMELGAIEQRP 159 Query: 121 KFEGRQMIMILSSK 134 + EGR M+M+LS K Sbjct: 160 RMEGRLMVMMLSPK 173 >gi|302518074|ref|ZP_07270416.1| translation initiation factor IF-3 [Streptomyces sp. SPB78] gi|333028250|ref|ZP_08456314.1| putative translation initiation factor IF-3 [Streptomyces sp. Tu6071] gi|302426969|gb|EFK98784.1| translation initiation factor IF-3 [Streptomyces sp. SPB78] gi|332748102|gb|EGJ78543.1| putative translation initiation factor IF-3 [Streptomyces sp. Tu6071] Length = 229 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 48 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 108 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 167 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 168 KQDGRNMIMVLGP 180 >gi|332653950|ref|ZP_08419694.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16] gi|332517036|gb|EGJ46641.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16] Length = 147 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 87/136 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLV+I + P VCK++D K R+ K EARK Q+ IKE++M P I Sbjct: 7 LRMAEEQNLDLVKISPNAVPPVCKLMDYGKYRFEQTKREKEARKNQRVVEIKEIRMSPSI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D VKL+ FL +G + K++V+FRGRE+ H ++G++LL E GE + +D P Sbjct: 67 DVNDFNVKLRNAQKFLSEGNRCKVTVRFRGREMAHTNIGQDLLLKFAESCGETAVMDKSP 126 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M + LS K Sbjct: 127 KLEGRHMSIFLSPKPA 142 >gi|284991466|ref|YP_003410020.1| translation initiation factor IF-3 [Geodermatophilus obscurus DSM 43160] gi|284064711|gb|ADB75649.1| translation initiation factor IF-3 [Geodermatophilus obscurus DSM 43160] Length = 212 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ++ LDLVE+ P V K++D K +Y + A EAR+ Q T IKE+++R I Sbjct: 53 LRLAQDSELDLVEVAPMAKPPVAKLMDYGKFKYESAQKAREARRNQALTVIKEMRLRLKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVKI+V FRGRE ++G LL + + E+ ++ P Sbjct: 113 DPHDYETKKGHVERFLRSGDKVKITVMFRGREQSRPEMGYRLLQRLAQDVSELGVVESNP 172 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+++ Sbjct: 173 KQDGRNMVMVIAP 185 >gi|226224388|ref|YP_002758495.1| translation initiation factor IF-3 [Listeria monocytogenes Clip81459] gi|225876850|emb|CAS05559.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 178 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 42 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 102 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 161 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 162 KMDGRSMFLVLAP 174 >gi|259505617|ref|ZP_05748519.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] gi|29427498|sp|Q8FTQ2|IF3_COREF RecName: Full=Translation initiation factor IF-3 gi|259166782|gb|EEW51336.1| translation initiation factor IF-3 [Corynebacterium efficiens YS-314] Length = 203 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 66 KLAFDADLDLVEVAPTAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 125 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ K Sbjct: 126 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVAEYGVVETRAK 185 Query: 122 FEGRQMIMILSS 133 +GR M M++ Sbjct: 186 QDGRNMTMVIGP 197 >gi|300021917|ref|YP_003754528.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans ATCC 51888] gi|299523738|gb|ADJ22207.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans ATCC 51888] Length = 176 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI P VCKILD K ++ QK A EARK QK +KE+KMRP I Sbjct: 43 LARAGDVGLDLVEISPDAEPPVCKILDFGKFKFQEQKKAAEARKNQKIVELKEIKMRPGI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKL+AI F +G KVKI+++FRGRE+ H LG +L +K I++++ EP Sbjct: 103 DDHDYDVKLRAIKRFFEEGDKVKITLRFRGREMAHSQLGMAVLQRVKVDTEAIAKVESEP 162 Query: 121 KFEGRQMIMILSSK 134 +FEGRQM+M+L+ K Sbjct: 163 RFEGRQMVMVLAPK 176 >gi|117928476|ref|YP_873027.1| translation initiation factor 3 [Acidothermus cellulolyticus 11B] gi|117648939|gb|ABK53041.1| bacterial translation initiation factor 3 (bIF-3) [Acidothermus cellulolyticus 11B] Length = 225 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P V K++D K +Y A EARK Q T IKE+K+RP I Sbjct: 63 LRLAEEADLDLVEVAPMARPPVVKLMDYGKFKYESAVKAREARKHQAQTVIKEMKLRPKI 122 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL +G KVKI++ FRGRE ++G LL + E ++ ++ P Sbjct: 123 DNHDYETKKNHVVRFLNEGDKVKITIMFRGREQSRPEMGLRLLQRLAEDVADLGYVEAAP 182 Query: 121 KFEGRQMIMILSS 133 K +GR M MIL Sbjct: 183 KLDGRNMTMILGP 195 >gi|324998029|ref|ZP_08119141.1| translation initiation factor IF-3 [Pseudonocardia sp. P1] Length = 178 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 23 LRLAQDADLDLVEVAGQARPPVCKLMDYGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E G+I+ ++ P Sbjct: 83 DKHDYETKRGHVRRFLEGGNKVKVTIMFRGREQSRPELGYRLLQRLAEDIGDIAVVEAAP 142 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 143 KQDGRNMTMVLAP 155 >gi|329944515|ref|ZP_08292680.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170 str. F0386] gi|328530280|gb|EGF57159.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170 str. F0386] Length = 199 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 140 RQDGRNMVMVLAP 152 >gi|291450425|ref|ZP_06589815.1| translation initiation factor IF-3 [Streptomyces albus J1074] gi|291353374|gb|EFE80276.1| translation initiation factor IF-3 [Streptomyces albus J1074] Length = 222 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 43 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ I+ P Sbjct: 103 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFIESNP 162 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 163 KQDGRNMIMVLGP 175 >gi|94310106|ref|YP_583316.1| translation initiation factor 3 [Cupriavidus metallidurans CH34] gi|93353958|gb|ABF08047.1| protein chain initiation factor IF-3 [Cupriavidus metallidurans CH34] Length = 154 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + TP V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 18 LRLAEDKDLDLVEIAPNATPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L +K E+ +++ P Sbjct: 78 DDGDYNVKLRNLRRFLEEGDKTKITLRFRGREMAHQEIGARVLERLKADLEELGQVEQMP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 138 KMEGRQMVMVLAPKK 152 >gi|300311295|ref|YP_003775387.1| translation initiation factor protein [Herbaspirillum seropedicae SmR1] gi|300074080|gb|ADJ63479.1| translation initiation factor protein [Herbaspirillum seropedicae SmR1] Length = 156 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++EA +DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 20 LRLSEEAEVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G +L +K +++ P Sbjct: 80 DDGDYNIKLRNLTKFLEDGDKTKITLRFRGREMAHQEIGMRMLERLKADLEPYGQVEQFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 140 KMEGRQMIMVLAPKK 154 >gi|323702722|ref|ZP_08114383.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans DSM 574] gi|323532385|gb|EGB22263.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans DSM 574] Length = 145 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ P VC+I+D K +Y K EA+KKQ+ +KEVK+RP I Sbjct: 7 LRIAEERQLDLVEVAPQAKPPVCRIMDFGKFKYEQSKREKEAKKKQRIIQVKEVKLRPRI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK+K + FL+DG KVK ++ FRGREI+H +LG+ LL+ + E ++ ++ +P Sbjct: 67 EEHDYQVKVKHAERFLKDGDKVKATIMFRGREIVHTELGQNLLNKLAEDLKDLCTVERQP 126 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 127 KLEGKNMIMILAPK 140 >gi|310815870|ref|YP_003963834.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25] gi|308754605|gb|ADO42534.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25] Length = 136 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 64/131 (48%), Positives = 88/131 (67%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLVEI + P VCKI+D K +Y QK EAR+ QK IKEVK RP D Sbjct: 2 LAEEAGLDLVEISPNAVPPVCKIMDFGKYKYETQKKEAEARRNQKVIEIKEVKFRPNTDT 61 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK++++ FL +G KVK++++FRGRE+ HQDLGR+LL + E +++ PK Sbjct: 62 HDYDVKMRSVLKFLGEGDKVKVTLRFRGREMAHQDLGRQLLDRVAEDVKAEGKVESMPKL 121 Query: 123 EGRQMIMILSS 133 EGRQM+M++ Sbjct: 122 EGRQMVMMIGP 132 >gi|323339585|ref|ZP_08079859.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC 25644] gi|323092980|gb|EFZ35578.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC 25644] Length = 166 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++ANLDLV + P V KI+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 30 LQMAEQANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVINVKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+++GRE+L E +++ ++ +P Sbjct: 90 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKEIGREVLDRFAEETSDVATVESKP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLMLAPKA 164 >gi|229816631|ref|ZP_04446920.1| hypothetical protein COLINT_03679 [Collinsella intestinalis DSM 13280] gi|229807759|gb|EEP43572.1| hypothetical protein COLINT_03679 [Collinsella intestinalis DSM 13280] Length = 195 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLVEI + P VCK++D K +Y A +ARK Q +KE+K RP ID Sbjct: 48 RIADDQNLDLVEIAPNAEPPVCKVMDYGKFKYQQAMKAKQARKNQSKVEVKEMKFRPKID 107 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 108 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPFATVESQPK 167 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 168 LEGRNMLMLLAP 179 >gi|119026094|ref|YP_909939.1| translation initiation factor IF-3 [Bifidobacterium adolescentis ATCC 15703] gi|118765678|dbj|BAF39857.1| translation initiation factor If-3 [Bifidobacterium adolescentis ATCC 15703] Length = 306 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 115 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 174 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 175 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 234 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 235 KQEGRNIIMTLAPK 248 >gi|294670481|ref|ZP_06735361.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307760|gb|EFE49003.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 142 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|295839837|ref|ZP_06826770.1| translation initiation factor IF-3 [Streptomyces sp. SPB74] gi|197698676|gb|EDY45609.1| translation initiation factor IF-3 [Streptomyces sp. SPB74] Length = 245 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 64 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 124 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 183 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 184 KQDGRNMIMVLGP 196 >gi|296394206|ref|YP_003659090.1| translation initiation factor IF-3 [Segniliparus rotundus DSM 44985] gi|296181353|gb|ADG98259.1| translation initiation factor IF-3 [Segniliparus rotundus DSM 44985] Length = 225 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP I Sbjct: 35 LRLAVEADLDLVEVAPEARPPVCKIMDYGKFRYETAQKARESRKHQQNTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ P Sbjct: 95 DDHDYETKKGHVVRFLDAGAKVKVTIMFRGREQSRPELGHRLLQRLGADVSEHGFVETVP 154 Query: 121 KFEGRQMIMILSS 133 + +GR M MIL+ Sbjct: 155 RLDGRNMTMILAP 167 >gi|303257522|ref|ZP_07343534.1| translation initiation factor IF-3 [Burkholderiales bacterium 1_1_47] gi|331000213|ref|ZP_08323897.1| translation initiation factor IF-3 [Parasutterella excrementihominis YIT 11859] gi|302859492|gb|EFL82571.1| translation initiation factor IF-3 [Burkholderiales bacterium 1_1_47] gi|329572379|gb|EGG54032.1| translation initiation factor IF-3 [Parasutterella excrementihominis YIT 11859] Length = 177 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 93/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA++DLVE+ + P VC+++D K RY QK A E + KQK +KEVK RP Sbjct: 41 LAMAEEADVDLVEVAPNARPPVCRLMDYGKFRYQEQKKAQEQKAKQKVIQVKEVKFRPQT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+A+ FL DG K K+++++RGRE+ HQ+ G +LL+ +KE +I++++ P Sbjct: 101 DKNDYDTKLRALTRFLADGNKAKVTLRYRGREMAHQEFGTDLLNKVKEDLADIAQVESFP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 161 KLEGRQMIMVLAPKK 175 >gi|302528048|ref|ZP_07280390.1| translation initiation factor IF-3 [Streptomyces sp. AA4] gi|302436943|gb|EFL08759.1| translation initiation factor IF-3 [Streptomyces sp. AA4] Length = 201 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V K++D K +Y + A ++R+ Q T IKE K+RP I Sbjct: 52 LRLAQEADLDLVEVAPQARPPVAKLMDFGKFKYESAQKARDSRRNQHLTVIKEQKLRPKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ P Sbjct: 112 DQHDYETKKGHVSRFLAAGNKVKVTIMFRGREQSRPELGFRLLQKLADDVTELGFVESSP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 172 KQDGRNMIMVLAP 184 >gi|254821220|ref|ZP_05226221.1| translation initiation factor IF-3 [Mycobacterium intracellulare ATCC 13950] Length = 173 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E ++ Sbjct: 67 DDHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVAEYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|224826513|ref|ZP_03699614.1| translation initiation factor IF-3 [Lutiella nitroferrum 2002] gi|224601114|gb|EEG07296.1| translation initiation factor IF-3 [Lutiella nitroferrum 2002] Length = 174 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E ++DLVEI + P VCK++D K +Y K EA+ KQK IKEVK RP Sbjct: 39 MAAAEELDIDLVEISPTAQPPVCKLMDYGKFKYEQSKKRHEAKLKQKQVQIKEVKFRPGT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 99 DDGDYGVKLRNLVRFLSDGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 158 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 159 RLEGRQMVMMIAPKK 173 >gi|254460765|ref|ZP_05074181.1| translation initiation factor IF-3 [Rhodobacterales bacterium HTCC2083] gi|206677354|gb|EDZ41841.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium HTCC2083] Length = 134 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 65/131 (49%), Positives = 87/131 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLVEI + P VCKI+D K +Y QK EARKKQK IKEVK RP D Sbjct: 1 MAEEVGLDLVEISPNANPPVCKIMDFGKFKYETQKREAEARKKQKIIEIKEVKFRPNTDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D +VK++ + FL +G KVK++++FRGRE+ H +LGRELL + E R++ PK Sbjct: 61 NDYEVKMRNVYKFLENGDKVKVTLRFRGREMAHLNLGRELLERVAADTKEHGRVENFPKM 120 Query: 123 EGRQMIMILSS 133 EGRQM+M++ Sbjct: 121 EGRQMVMLIGP 131 >gi|332798665|ref|YP_004460164.1| Translation initiation factor IF-3 [Tepidanaerobacter sp. Re1] gi|332696400|gb|AEE90857.1| Translation initiation factor IF-3 [Tepidanaerobacter sp. Re1] Length = 189 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE LDLV+I S P VCKI+D K +Y K EARKKQK +KE++M P I Sbjct: 50 LHYAQEVQLDLVKISSDAKPPVCKIMDFGKYKYEQSKREKEARKKQKVINVKEIRMNPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV+LK FL+DG KVK+S++FRGR++ H LG E+L+ + E E+ ++ P Sbjct: 110 DEHDFQVRLKNTIKFLKDGDKVKVSIRFRGRQMTHTKLGEEVLNRVVENISEVGVVEKPP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M+++ K Sbjct: 170 KMEGRNMVMVIAPK 183 >gi|224500779|ref|ZP_03669128.1| translation initiation factor IF-3 [Listeria monocytogenes Finland 1988] Length = 167 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|293376472|ref|ZP_06622701.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909] gi|325842041|ref|ZP_08167578.1| translation initiation factor IF-3 [Turicibacter sp. HGF1] gi|292644894|gb|EFF62975.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909] gi|325489763|gb|EGC92119.1| translation initiation factor IF-3 [Turicibacter sp. HGF1] Length = 195 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E NLDLV + P VC+I+D K RY Q++A EARK Q +KEV++ P I Sbjct: 60 LRAASEQNLDLVCVAPQANPIVCRIMDYGKYRYEQQRHAREARKNQVVVSLKEVRLSPNI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KVK+SV+F+GREI H + GR +L+ E EI+ ++ P Sbjct: 120 DQHDFNTKLKNAQKFLSKGDKVKVSVRFKGREIAHTEFGRNVLTRFAEGCAEIADLESNP 179 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 180 KLDGRSMFLVLAPKK 194 >gi|293604690|ref|ZP_06687090.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC 43553] gi|292816859|gb|EFF75940.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC 43553] Length = 167 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQSDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ K Sbjct: 141 LEGRQMVMVLAPKK 154 >gi|118593811|ref|ZP_01551177.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614] gi|118433606|gb|EAV40271.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614] Length = 152 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 69/133 (51%), Positives = 96/133 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A +A LDLVEI + P VCKILD + +Y QK A E RKKQK+ IKE+KMRP I Sbjct: 18 MGIAMDAGLDLVEIQPNANPPVCKILDYGRYKYQAQKKAAETRKKQKTVEIKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K++ F +G KVK++++FRGRE+ HQDLG LL+ ++E EI++++ P Sbjct: 78 DTHDYEVKMKSMLRFFGEGDKVKVTLRFRGREMAHQDLGMNLLNKVREETNEIAKVESAP 137 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 138 KLEGRQMVMVLAP 150 >gi|329939051|ref|ZP_08288425.1| translation initiation factor IF-3 [Streptomyces griseoaurantiacus M045] gi|329301936|gb|EGG45829.1| translation initiation factor IF-3 [Streptomyces griseoaurantiacus M045] Length = 209 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|269956116|ref|YP_003325905.1| translation initiation factor IF-3 [Xylanimonas cellulosilytica DSM 15894] gi|269304797|gb|ACZ30347.1| translation initiation factor IF-3 [Xylanimonas cellulosilytica DSM 15894] Length = 351 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P V K++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 40 LKLAQDADLDLVEVAPDARPPVAKLMDYGKFKYESDMKAREARRNQANTVLKEIRFRLKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G LL+ + E ++ ++ P Sbjct: 100 DAHDYETKKGHVVRFLEGGDKVKVMIMFRGREQSRPEMGVRLLTRLAEEVADLGSVESMP 159 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L Sbjct: 160 KQDGRNMTMVLGP 172 >gi|108759780|ref|YP_628849.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622] gi|1352320|sp|P48516|IF3_MYXXA RecName: Full=Translation initiation factor IF-3 gi|123248162|sp|Q1DES4|IF3_MYXXD RecName: Full=Translation initiation factor IF-3 gi|436165|gb|AAC13748.1| Dsg [Myxococcus xanthus] gi|108463660|gb|ABF88845.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622] Length = 247 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ LDLVEI +P VCKI+D K +Y +K A EA++ Q + +KEVK+RP Sbjct: 45 LDRARTEGLDLVEISPMASPPVCKIMDYGKFKYEEKKKASEAKRAQVTVLLKEVKLRPKT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ F+ DG K K+ ++FRGREI H++ G +L ++ + +++ ++ P Sbjct: 105 EEHDYEFKVRNTRRFIEDGNKAKVVIQFRGREITHREQGTAILDDVAKDLKDVAVVEQMP 164 Query: 121 KFEGRQMIMILSS 133 + EGR M MIL+ Sbjct: 165 RMEGRLMFMILAP 177 >gi|302389961|ref|YP_003825782.1| bacterial translation initiation factor 3 (bIF-3) [Thermosediminibacter oceani DSM 16646] gi|302200589|gb|ADL08159.1| bacterial translation initiation factor 3 (bIF-3) [Thermosediminibacter oceani DSM 16646] Length = 192 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV++ P VCKI+D K +Y K EARK QK IKE++M P I Sbjct: 53 LKIAQERQLDLVKVAPQAKPPVCKIMDYGKYKYEQSKREKEARKNQKVISIKEIRMSPNI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QV++K FL DG KVK++++FRGREI H LG E+L + + E ++ P Sbjct: 113 EEHDFQVRVKNALRFLDDGNKVKVTIRFRGREITHTQLGEEVLKRLADSVKEKGIVEKPP 172 Query: 121 KFEGRQMIMILSSK 134 EGR M+MILS K Sbjct: 173 VIEGRNMVMILSPK 186 >gi|39933120|ref|NP_945396.1| translation initiation factor IF-3 [Rhodopseudomonas palustris CGA009] gi|192288474|ref|YP_001989079.1| translation initiation factor IF-3 [Rhodopseudomonas palustris TIE-1] gi|39652745|emb|CAE25484.1| translation initiation factor IF-3 [Rhodopseudomonas palustris CGA009] gi|192282223|gb|ACE98603.1| translation initiation factor IF-3 [Rhodopseudomonas palustris TIE-1] Length = 192 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 59 IKMAMDAGMDLVEISPTSSPPVCKIMDYGKYKYSAQKKAAEARKKQKIVEIKEIKLRPMI 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ +P Sbjct: 119 DDHDYEVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDP 178 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 179 RFEGRQVVMVLAPR 192 >gi|311105447|ref|YP_003978300.1| translation initiation factor IF-3 [Achromobacter xylosoxidans A8] gi|310760136|gb|ADP15585.1| translation initiation factor IF-3 [Achromobacter xylosoxidans A8] Length = 166 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 92/134 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQSDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ K Sbjct: 141 LEGRQMVMVLAPKK 154 >gi|146337304|ref|YP_001202352.1| translation initiation factor IF-3 [Bradyrhizobium sp. ORS278] gi|146190110|emb|CAL74102.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS278] Length = 200 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 67 IKMAAEAGMDLVEISPNNSPPVCKIMDYGKYKYSAQKKAAEARKKQKVVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 127 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+L+ + Sbjct: 187 KFEGRQVVMVLAPR 200 >gi|86741868|ref|YP_482268.1| translation initiation factor IF-3 [Frankia sp. CcI3] gi|86568730|gb|ABD12539.1| bacterial translation initiation factor 3 (bIF-3) [Frankia sp. CcI3] Length = 205 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MAQE +LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 57 MRMAQEVDLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 117 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSADVADLGYVEAQP 176 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 177 KQDGRNMTMVMAP 189 >gi|307942620|ref|ZP_07657968.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4] gi|307774259|gb|EFO33472.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4] Length = 154 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 71/133 (53%), Positives = 95/133 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A A LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP I Sbjct: 20 MDIAMGAGLDLVEIQPNAQPPVCKILDYGRYKYQAQKKAAEARKKQKTVEIKEIKMRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K + F DG KVK++++FRGRE+ HQDLG +LL ++E EI++++ P Sbjct: 80 DTHDYEVKMKNMLRFFNDGDKVKVTLRFRGREMAHQDLGVKLLHKVREETAEIAKVESNP 139 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 140 KLEGRQMVMVLAP 152 >gi|317403270|gb|EFV83788.1| translation initiation factor IF-3 [Achromobacter xylosoxidans C54] Length = 166 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 91/134 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +++++ ++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQNDVDLVEIAPNAEPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLLELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ K Sbjct: 141 LEGRQMVMVLAPKK 154 >gi|259046988|ref|ZP_05737389.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC 49175] gi|259036431|gb|EEW37686.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC 49175] Length = 167 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 31 LRLAEQAGLDLVLVSPNAKPPVARIMDYGKYRFEQQKKEREARKNQKVINIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLKA FL G KVK S++F+GR I H+++G+++L + E+ EI+ ++ + Sbjct: 91 DENDFNTKLKAAIKFLEKGDKVKASIRFKGRAITHKEIGQKVLERLAEQVSEIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 151 KMDGRSMFLMLAPK 164 >gi|116670038|ref|YP_830971.1| translation initiation factor 3 [Arthrobacter sp. FB24] gi|116610147|gb|ABK02871.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter sp. FB24] Length = 396 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 57 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL + E+ ++ P Sbjct: 117 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFADDVAEVGVVESSP 176 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 177 RIDGRNMVMVVGP 189 >gi|220912249|ref|YP_002487558.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus A6] gi|219859127|gb|ACL39469.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus A6] Length = 356 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 46 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL + E+ ++ P Sbjct: 106 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFADDVAEVGVVESSP 165 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 166 RIDGRNMVMVVGP 178 >gi|116873222|ref|YP_850003.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217964067|ref|YP_002349745.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23] gi|224503784|ref|ZP_03672091.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-561] gi|254826389|ref|ZP_05231390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-194] gi|254829585|ref|ZP_05234272.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N3-165] gi|254832540|ref|ZP_05237195.1| translation initiation factor IF-3 [Listeria monocytogenes 10403S] gi|254854526|ref|ZP_05243874.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-503] gi|254901188|ref|ZP_05261112.1| translation initiation factor IF-3 [Listeria monocytogenes J0161] gi|254933634|ref|ZP_05266993.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262] gi|254938393|ref|ZP_05270090.1| translation initiation factor IF-3 [Listeria monocytogenes F6900] gi|254993708|ref|ZP_05275898.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-064] gi|255028319|ref|ZP_05300270.1| translation initiation factor IF-3 [Listeria monocytogenes LO28] gi|255521083|ref|ZP_05388320.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-175] gi|290893087|ref|ZP_06556076.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-071] gi|300766431|ref|ZP_07076386.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N1-017] gi|116742100|emb|CAK21224.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217333337|gb|ACK39131.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23] gi|258602002|gb|EEW15327.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N3-165] gi|258607926|gb|EEW20534.1| translation initiation factor IF-3 [Listeria monocytogenes FSL R2-503] gi|258611005|gb|EEW23613.1| translation initiation factor IF-3 [Listeria monocytogenes F6900] gi|290557447|gb|EFD90972.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-071] gi|293585197|gb|EFF97229.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262] gi|293595629|gb|EFG03390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-194] gi|300512855|gb|EFK39947.1| translation initiation factor IF-3 [Listeria monocytogenes FSL N1-017] gi|307571365|emb|CAR84544.1| translation initiation factor IF-3 [Listeria monocytogenes L99] gi|313608207|gb|EFR84232.1| translation initiation factor IF-3 [Listeria monocytogenes FSL F2-208] gi|328473852|gb|EGF44682.1| translation initiation factor IF-3 [Listeria monocytogenes 220] gi|332312225|gb|EGJ25320.1| Translation initiation factor IF-3 [Listeria monocytogenes str. Scott A] Length = 167 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|326317188|ref|YP_004234860.1| translation initiation factor IF-3 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374024|gb|ADX46293.1| translation initiation factor IF-3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 173 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLVDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ++G LL+ I++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQEIGLALLNRIRDDLGDTILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|149185627|ref|ZP_01863943.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21] gi|148830847|gb|EDL49282.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21] Length = 140 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 93/133 (69%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A E L+LVE+ + P VCK LD+ K RY QK A ARK QK+ IKEVKMRP ID Sbjct: 8 EQANELGLNLVEVSPNADPPVCKFLDVGKYRYEAQKKANLARKTQKTQDIKEVKMRPNID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK++ ++ F+ +G KVK +++FRGRE+ HQ LG +LL+ +++ EI++++ P+ Sbjct: 68 DHDYDVKMRNVNKFIENGDKVKCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPR 127 Query: 122 FEGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 128 LEGRQMVMVLAPK 140 >gi|257056555|ref|YP_003134387.1| translation initiation factor 3 [Saccharomonospora viridis DSM 43017] gi|256586427|gb|ACU97560.1| bacterial translation initiation factor 3 (bIF-3) [Saccharomonospora viridis DSM 43017] Length = 168 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V K++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 17 LRLAQEADLDLVEVAPQARPPVAKLMDYGKYKYESAQKARESRRNQQLTVIKEQKLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 77 DPHDYETKKGHVSRFLEAGNKVKVTIMFRGREQSRPELGFRLLQRLAEDVAELGFVESKP 136 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L+ Sbjct: 137 KQDGRNMVMVLAP 149 >gi|237653685|ref|YP_002889999.1| translation initiation factor IF-3 [Thauera sp. MZ1T] gi|237624932|gb|ACR01622.1| translation initiation factor IF-3 [Thauera sp. MZ1T] Length = 173 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI P VCK++D K +Y QK A EAR KQK +KEVK+RP Sbjct: 37 LNMAEEAGLDLVEIAPMAVPPVCKLMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D Q+KL+ + FL +G K K++++FRGRE+ HQ+ G L +K E+ +++ P Sbjct: 97 DENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERVKADLEELGQVEQMP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIMI++ K Sbjct: 157 KMEGRQMIMIIAPKK 171 >gi|148251836|ref|YP_001236421.1| translation initiation factor IF-3 [Bradyrhizobium sp. BTAi1] gi|146404009|gb|ABQ32515.1| bacterial translation initiation factor 3 (bIF-3) [Bradyrhizobium sp. BTAi1] Length = 200 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 67 IKMAAEAGMDLVEISPNNSPPVCKIMDYGKYKYSAQKKAAEARKKQKVVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 127 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+L+ + Sbjct: 187 KFEGRQVVMVLAPR 200 >gi|225181660|ref|ZP_03735100.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT 1] gi|225167641|gb|EEG76452.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT 1] Length = 140 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E NLDLV + S P VC+I+D K ++ K EARK QK+ +KEVK+RP I Sbjct: 5 LRIAGEKNLDLVAVSLSAKPPVCRIMDFGKYKFEQSKREKEARKNQKTITMKEVKVRPNI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKLK FL +G KVK +V FRGREI H +LG++LL I + ++ ++ P Sbjct: 65 EEHDFQVKLKNARRFLENGDKVKATVMFRGREITHPELGQKLLLRIAKDVEDLGNVERVP 124 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 125 KVEGRNMIMILTPKT 139 >gi|89074411|ref|ZP_01160893.1| translation initiation factor IF-3 [Photobacterium sp. SKA34] gi|89049898|gb|EAR55439.1| translation initiation factor IF-3 [Photobacterium sp. SKA34] Length = 160 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA +DLVEI + P VC+++D K + K A E +K QK IKEVK RP Sbjct: 24 MEVALEAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ LG ELL+ IK +I+ + P Sbjct: 84 DEGDYQVKLRNLTRFLEEGNKGKVTLRFRGREMAHQGLGIELLNRIKGELEDIAVCESFP 143 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQM M+L+ K Sbjct: 144 NRVEGRQMTMMLAPKK 159 >gi|94676969|ref|YP_588909.1| translation initiation factor IF-3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220119|gb|ABF14278.1| translation initiation factor IF-3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 171 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI S+ P VC+I+D K Y K+ E +KKQK T IKE+K RP I Sbjct: 35 LEKAEEAGVDLVEISSNAEPPVCRIMDYGKFLYEKSKSNKEQKKKQKITHIKEIKFRPGI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVK++ + FL +G KVKI+++FRGRE+ HQ LG E+L+ I+E +I+ ++ P Sbjct: 95 DESDYQVKIRNLMRFLIEGDKVKITLRFRGREMAHQKLGIEVLNRIREDLNDIALLESLP 154 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIMIL+ K Sbjct: 155 NKIEGRQMIMILAPKK 170 >gi|319407917|emb|CBI81571.1| translation initiation factor IF-3 [Bartonella schoenbuchensis R1] Length = 172 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 74/134 (55%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLVEI + P VCKI+DL KL+Y QK A E RKKQK+ +KE+KMRP + Sbjct: 39 LAMAADVGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKTIEVKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKA+ F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYEVKLKAVHRFIDHGNKVKITLRFRGREMAHQDLGMKLLQRVKEDTSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|260584104|ref|ZP_05851852.1| translation initiation factor IF-3 [Granulicatella elegans ATCC 700633] gi|260158730|gb|EEW93798.1| translation initiation factor IF-3 [Granulicatella elegans ATCC 700633] Length = 167 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 31 LRLAEQAGLDLVLVSPNAKPPVARIMDYGKYRFEQQKKEREARKNQKVINIKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLKA FL G KVK +++F+GR I H+++G+++L + E+ E++ ++ + Sbjct: 91 DENDFNTKLKAAQKFLEKGDKVKATIRFKGRAITHKEIGQKVLERLAEQVSELATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 151 KMDGRSMFLMLAPK 164 >gi|145224126|ref|YP_001134804.1| initiation factor 3 [Mycobacterium gilvum PYR-GCK] gi|145216612|gb|ABP46016.1| bacterial translation initiation factor 3 (bIF-3) [Mycobacterium gilvum PYR-GCK] Length = 175 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPDAKPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 67 DPHDYETKKGHVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|332284529|ref|YP_004416440.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7] gi|330428482|gb|AEC19816.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7] Length = 163 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q++++ +DLVEI + P VC+++D K +Y QK EA+ KQK +KEVK RP Sbjct: 20 LQLSEQHEVDLVEIAPNAAPPVCRLMDYGKFKYQEQKRQQEAKAKQKVIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + F+ +G K K++++FRGRE+ HQ+LG +L +++ E+ +++ P Sbjct: 80 DEGDYQVKLRNLRRFIEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLAELCQVEAMP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ + Sbjct: 140 KLEGRQMVMVLAPRK 154 >gi|33592590|ref|NP_880234.1| translation initiation factor IF-3 [Bordetella pertussis Tohama I] gi|33596581|ref|NP_884224.1| translation initiation factor IF-3 [Bordetella parapertussis 12822] gi|33601134|ref|NP_888694.1| translation initiation factor IF-3 [Bordetella bronchiseptica RB50] gi|39931243|sp|Q7VY63|IF3_BORPE RecName: Full=Translation initiation factor IF-3 gi|39931247|sp|Q7W911|IF3_BORPA RecName: Full=Translation initiation factor IF-3 gi|39931250|sp|Q7WKF6|IF3_BORBR RecName: Full=Translation initiation factor IF-3 gi|33572236|emb|CAE41787.1| translation initiation factor IF-3 [Bordetella pertussis Tohama I] gi|33573282|emb|CAE37263.1| translation initiation factor IF-3 [Bordetella parapertussis] gi|33575569|emb|CAE32647.1| translation initiation factor IF-3 [Bordetella bronchiseptica RB50] gi|332382007|gb|AEE66854.1| translation initiation factor IF-3 [Bordetella pertussis CS] Length = 164 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 92/134 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++++++++DLVEI + P VC+++D K +Y QK EAR KQK +KEVK RP D Sbjct: 21 RLSEQSDVDLVEIAPNADPPVCRLMDYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL +G K K++++FRGRE+ HQ+LG +L +++ E+++++ PK Sbjct: 81 EGDYQVKLRNLRRFLEEGDKAKVTLRFRGREMAHQELGMRVLERVRDDLIELAQVEAMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ + Sbjct: 141 LEGRQMVMVLAPRK 154 >gi|227890561|ref|ZP_04008366.1| protein translation initiation factor 3 [Lactobacillus salivarius ATCC 11741] gi|301300334|ref|ZP_07206539.1| translation initiation factor IF-3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867499|gb|EEJ74920.1| protein translation initiation factor 3 [Lactobacillus salivarius ATCC 11741] gi|300214323|gb|ADJ78739.1| Translation initiation factor IF-3 [Lactobacillus salivarius CECT 5713] gi|300852070|gb|EFK79749.1| translation initiation factor IF-3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 189 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ANLDLV + P V KI+D K R+ +QK EARKKQK IKEV++ P I Sbjct: 53 LKMAEDANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVVNIKEVRLSPTI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+D+GR++L+ E +++ ++ + Sbjct: 113 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKDIGRDVLNRFAEATEDVATVESKA 172 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 173 KMDGRSMFLMLAPKT 187 >gi|332701962|ref|ZP_08422050.1| Translation initiation factor IF-3 [Desulfovibrio africanus str. Walvis Bay] gi|332552111|gb|EGJ49155.1| Translation initiation factor IF-3 [Desulfovibrio africanus str. Walvis Bay] Length = 175 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE+ + P VC+I+D K +Y QK ARKK IKE+K RP Sbjct: 38 LRTAQEQGLDLVEVAPNSEPPVCRIMDYGKYKYEQQKKTQGARKKSSQVQIKEIKFRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I F+ DG + K + FRGREI+H+D G +L + E +I++++ EP Sbjct: 98 DEHDYQTKVKHIRRFIEDGDRCKAVIFFRGREIVHKDRGLVILKRVAEDLKDIAKVEQEP 157 Query: 121 KFEGRQMIMILSS 133 +FEGR M M+L Sbjct: 158 QFEGRTMNMMLVP 170 >gi|297562012|ref|YP_003680986.1| translation initiation factor IF-3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846460|gb|ADH68480.1| translation initiation factor IF-3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 182 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE++LDLVE+ + P V K++D K +Y A E+RK Q +T IKE+K+RP I Sbjct: 23 LRLAQESDLDLVEVAPTARPPVAKLMDYGKFKYESAVKARESRKNQSNTIIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LGR LL+ + E ++ ++ +P Sbjct: 83 DPHDYETKKGHVVRFLKSGDKVKVTIMFRGREQSRPELGRRLLARLAEDVQDLGTVESQP 142 Query: 121 KFEGRQMIMILSS 133 K +GR M+M++ Sbjct: 143 KQDGRNMVMVIGP 155 >gi|87200551|ref|YP_497808.1| translation initiation factor IF-3 [Novosphingobium aromaticivorans DSM 12444] gi|87136232|gb|ABD26974.1| bacterial translation initiation factor 3 (bIF-3) [Novosphingobium aromaticivorans DSM 12444] Length = 173 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDLVE+ + P VCK LD+ K RY QK A ARK QK+ IKE+KMRP I Sbjct: 40 IEQAADVGLDLVEVSPNADPPVCKFLDVGKFRYEAQKKANLARKSQKTQEIKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ + F+ +G KVKI+++FRGRE+ HQ LG LL +++ EI++++ P Sbjct: 100 DDHDYETKMRNVVKFIGEGDKVKITLRFRGRELSHQQLGMNLLRKVQDDVAEIAKVEAFP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 160 RMEGRQMLMVLAPK 173 >gi|227498536|ref|ZP_03928680.1| translation initiation factor IF-3 [Acidaminococcus sp. D21] gi|226903992|gb|EEH89910.1| translation initiation factor IF-3 [Acidaminococcus sp. D21] Length = 175 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + +LDLVEI P VC+I+D K +Y QK EARK+QK+ +KEVK+R I Sbjct: 39 LELAAQHHLDLVEIAPKAKPPVCRIMDYGKYQYEQQKREKEARKRQKTVDVKEVKLRIRI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK K FL G KVK ++ FRGRE+ H +LG ELL+ + + +I+ I+ +P Sbjct: 99 EEHDFDVKTKNAIRFLEGGDKVKATIMFRGRELTHPELGEELLNKMAVKLQDIAVIERKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+MI++ K Sbjct: 159 KLEGRNMVMIVAPKS 173 >gi|167968405|ref|ZP_02550682.1| translation initiation factor IF-3 [Mycobacterium tuberculosis H37Ra] gi|215404057|ref|ZP_03416238.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 02_1987] gi|215411287|ref|ZP_03420095.1| translation initiation factor IF-3 [Mycobacterium tuberculosis 94_M4241A] gi|215426960|ref|ZP_03424879.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T92] gi|215430533|ref|ZP_03428452.1| translation initiation factor IF-3 [Mycobacterium tuberculosis EAS054] gi|215445822|ref|ZP_03432574.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T85] gi|218753347|ref|ZP_03532143.1| translation initiation factor IF-3 [Mycobacterium tuberculosis GM 1503] gi|254231842|ref|ZP_04925169.1| initiation factor IF-3 infC [Mycobacterium tuberculosis C] gi|254550647|ref|ZP_05141094.1| translation initiation factor IF-3 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186589|ref|ZP_05764063.1| translation initiation factor IF-3 [Mycobacterium tuberculosis CPHL_A] gi|260200704|ref|ZP_05768195.1| translation initiation factor IF-3 [Mycobacterium tuberculosis T46] gi|260204910|ref|ZP_05772401.1| translation initiation factor IF-3 [Mycobacterium tuberculosis K85] gi|297634194|ref|ZP_06951974.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN 4207] gi|297731181|ref|ZP_06960299.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN R506] gi|313658513|ref|ZP_07815393.1| translation initiation factor IF-3 [Mycobacterium tuberculosis KZN V2475] gi|124600901|gb|EAY59911.1| initiation factor IF-3 infC [Mycobacterium tuberculosis C] Length = 173 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ + P VCKI+D K +Y + A E+R+ Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPNARPPVCKIMDYGKYKYEAAQKARESRRNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + I+ Sbjct: 67 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFIETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|329848409|ref|ZP_08263437.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19] gi|328843472|gb|EGF93041.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19] Length = 151 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ + P VCKILD K R+ QK EARKKQK IKE+K+RP I Sbjct: 18 LEAAEEAGLDLVEVSPTADPPVCKILDYGKFRFQEQKKKAEARKKQKVVEIKEIKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VK KA+ F +G KVK++++FRGRE+ H +LG +LL+ +K F ++++ EP Sbjct: 78 DIHDYEVKAKAMTRFFEEGDKVKVTLRFRGREMAHPELGMKLLNKVKADFEPTTKVEYEP 137 Query: 121 KFEGRQMIMILSSK 134 + EG+QMIMIL+ K Sbjct: 138 RMEGKQMIMILAPK 151 >gi|296446966|ref|ZP_06888901.1| translation initiation factor IF-3 [Methylosinus trichosporium OB3b] gi|296255533|gb|EFH02625.1| translation initiation factor IF-3 [Methylosinus trichosporium OB3b] Length = 175 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ A LDLVEI + P VCK+LD K R+ QK A EARKKQK +KE+K+RP I Sbjct: 42 LSRAEAAGLDLVEIAPNSEPPVCKLLDYGKFRFLEQKKAAEARKKQKIVEVKEIKLRPGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK++++FRGREI HQD+G L++ +K I++++ EP Sbjct: 102 DEHDYEVKMKAVQRFFEEGDKVKVTLRFRGREIAHQDIGYRLMTRVKAETANIAKVELEP 161 Query: 121 KFEGRQMIMILSSK 134 EGRQMIM+L+ + Sbjct: 162 SMEGRQMIMVLAPR 175 >gi|255026967|ref|ZP_05298953.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J2-003] Length = 167 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|320531667|ref|ZP_08032608.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136142|gb|EFW28149.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 171 str. F0337] Length = 185 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 140 RQDGRNMVMVLAP 152 >gi|300787907|ref|YP_003768198.1| translation initiation factor IF-3 [Amycolatopsis mediterranei U32] gi|299797421|gb|ADJ47796.1| translation initiation factor IF-3 [Amycolatopsis mediterranei U32] Length = 205 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ P VCK++D K +Y + A E+R+ Q+ T IKE K+RP I Sbjct: 53 LRLAQENDLDLVEVAPQARPPVCKLMDFGKFKYESAQKARESRRNQQLTVIKEQKLRPKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E E+ ++ Sbjct: 113 DQHDYETKKGHVSRFLAAGNKVKVTIMFRGREQSRPELGYRLLQKLAEDVTELGFVESSA 172 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 173 KQDGRNMIMVLAP 185 >gi|292493206|ref|YP_003528645.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4] gi|291581801|gb|ADE16258.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4] Length = 165 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA DLVEI P VC+I+D K + K ARKKQK IKEVK RP Sbjct: 31 LRVAEEAGRDLVEIAPQAQPPVCRIMDYGKYLFEESKKRQAARKKQKQIQIKEVKFRPGT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL++G K K+S++FRGRE+ HQ+LG +LL +++ E ++ P Sbjct: 91 EEGDYQVKLRNLVRFLKEGDKAKVSLRFRGRELAHQELGLKLLERVRDDLAEYGTVEQNP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 151 KREGRQMVMVLAPKK 165 >gi|317052583|ref|YP_004113699.1| translation initiation factor IF-3 [Desulfurispirillum indicum S5] gi|316947667|gb|ADU67143.1| translation initiation factor IF-3 [Desulfurispirillum indicum S5] Length = 156 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVE+ + P VCKI+D K Y K EA+K QK IKEVK RP I Sbjct: 20 LEAAHNRGLDLVEVAPAAKPPVCKIMDFGKFAYEQSKKQKEAKKNQKLIVIKEVKFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL DG KVK+++ +RGRE+ H ++GRE+L+ + + ++ P Sbjct: 80 EEHDYNFKLKHAQRFLEDGAKVKVTIMYRGREMAHTEIGREILNKVVADMEGLCTVEAPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M M+L+ Sbjct: 140 KLEGRNMTMMLAP 152 >gi|111017977|ref|YP_700949.1| translation initiation factor IF-3 [Rhodococcus jostii RHA1] gi|110817507|gb|ABG92791.1| translation initiation factor IF-3 [Rhodococcus jostii RHA1] Length = 190 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRLALEADLDLVEVAPDARPPVCKIMDYGKFKYEAAQKARESRKNQQLTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKRNVVRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|297617666|ref|YP_003702825.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus DSM 12680] gi|297145503|gb|ADI02260.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus DSM 12680] Length = 157 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A E NLDLVE+ P VC+++D K RY K EARKKQK +KEVKMRP I Sbjct: 18 LQRAIEKNLDLVEVAPGAKPPVCRLMDFGKFRYEQSKRDKEARKKQKVITVKEVKMRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK K FL++G KVK+++ FRGREI H LG+EL E ++ I+ EP Sbjct: 78 DHHDFLVKAKNARRFLQNGDKVKVTIMFRGREISHAQLGQELCMRFAEELSSLASIEREP 137 Query: 121 KFEGRQMIMILSSK 134 + EG+ MIMIL+ + Sbjct: 138 RVEGKNMIMILTPR 151 >gi|257064217|ref|YP_003143889.1| bacterial translation initiation factor 3 (bIF-3) [Slackia heliotrinireducens DSM 20476] gi|256791870|gb|ACV22540.1| bacterial translation initiation factor 3 (bIF-3) [Slackia heliotrinireducens DSM 20476] Length = 197 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLVEI + P VC+I+D K +Y A +ARKKQ IKE+K RP I Sbjct: 49 LRIAENQQLDLVEIAPNANPPVCRIMDYGKFKYDQAIKAKQARKKQTKVEIKEMKFRPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D K K I FL+DG KVKI++ FRGRE+ H D G +L + + +++ ++ +P Sbjct: 109 DIGDYTTKKKHIIRFLQDGAKVKITIMFRGREMAHPDQGLSILERLADDLKDVAVVENQP 168 Query: 121 KFEGRQMIMILSS 133 K EGR M M+++ Sbjct: 169 KMEGRNMHMLIAP 181 >gi|139437957|ref|ZP_01771510.1| Hypothetical protein COLAER_00496 [Collinsella aerofaciens ATCC 25986] gi|133776154|gb|EBA39974.1| Hypothetical protein COLAER_00496 [Collinsella aerofaciens ATCC 25986] Length = 189 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + LDLVEI + P VCK++D K +Y A ARK Q +KE+K RP ID Sbjct: 43 RVADDQGLDLVEIAPNAEPPVCKVMDYGKFKYQQAMKAKAARKNQSKVEVKEMKFRPKID 102 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D + K + FL+ G +VKI++ FRGRE+ H + G +L + E + ++ +PK Sbjct: 103 VGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGLNVLERLAEDLKPYATVESKPK 162 Query: 122 FEGRQMIMILSS 133 EGR M+M+L+ Sbjct: 163 MEGRNMLMLLAP 174 >gi|39996616|ref|NP_952567.1| translation initiation factor IF-3 [Geobacter sulfurreducens PCA] gi|81702455|sp|Q74D03|IF3_GEOSL RecName: Full=Translation initiation factor IF-3 gi|39983497|gb|AAR34890.1| translation initiation factor IF-3 [Geobacter sulfurreducens PCA] gi|307634866|gb|ADI84352.2| translation initiation factor IF-3 [Geobacter sulfurreducens KN400] Length = 172 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EARKKQ +KEVK+RP Sbjct: 36 LALAEARQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEARKKQSHVQVKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K + F+ +G K K+++ FRGREI H + G L + +I+ ++ +P Sbjct: 96 DEHDLMTKIKHVRRFIEEGNKAKVTLVFRGREITHLEFGSRALDRVAAELEDIAVVEFKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|16800963|ref|NP_471231.1| translation initiation factor IF-3 [Listeria innocua Clip11262] gi|16803825|ref|NP_465310.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e] gi|46908015|ref|YP_014404.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. F2365] gi|61213118|sp|Q71YN3|IF3_LISMF RecName: Full=Translation initiation factor IF-3 gi|61226338|sp|P0A3L1|IF3_LISMO RecName: Full=Translation initiation factor IF-3 gi|61226339|sp|P0A3L2|IF3_LISIN RecName: Full=Translation initiation factor IF-3 gi|2879775|emb|CAA68920.1| translation initiation factor, IF3 [Listeria monocytogenes] gi|16411239|emb|CAC99863.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e] gi|16414398|emb|CAC97127.1| translation initiation factor IF-3 [Listeria innocua Clip11262] gi|46881285|gb|AAT04581.1| translation initiation factor IF-3 [Listeria monocytogenes serotype 4b str. F2365] Length = 171 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 95 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 154 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 155 KMDGRSMFLVLAP 167 >gi|38233750|ref|NP_939517.1| translation initiation factor IF-3 [Corynebacterium diphtheriae NCTC 13129] gi|38200011|emb|CAE49680.1| translation initiation factor IF-3 [Corynebacterium diphtheriae] Length = 167 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 30 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E ++ +PK Sbjct: 90 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAGDVAEYGIVESKPK 149 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 150 QDGRNMTMVFGP 161 >gi|241764279|ref|ZP_04762309.1| translation initiation factor IF-3 [Acidovorax delafieldii 2AN] gi|241366348|gb|EER60878.1| translation initiation factor IF-3 [Acidovorax delafieldii 2AN] Length = 177 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 87/131 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKRAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ+LG LL+ I++ + I+ P Sbjct: 84 DDGDYNIKMRNIRRFLADGDKCKITLRFRGREITHQELGLALLNRIRDELADSIIIEQFP 143 Query: 121 KFEGRQMIMIL 131 K EGRQMIM++ Sbjct: 144 KLEGRQMIMMI 154 >gi|282864276|ref|ZP_06273332.1| translation initiation factor IF-3 [Streptomyces sp. ACTE] gi|282560763|gb|EFB66309.1| translation initiation factor IF-3 [Streptomyces sp. ACTE] Length = 205 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ +S P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAASARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|304415439|ref|ZP_07396088.1| translation initiation factor IF-3 [Candidatus Regiella insecticola LSR1] gi|304282703|gb|EFL91217.1| translation initiation factor IF-3 [Candidatus Regiella insecticola LSR1] Length = 182 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K A E +KKQK IKE+K RP Sbjct: 45 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYVKSKTAQEQKKKQKVVHIKEIKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +KE E + ++ P Sbjct: 105 DESDYKVKLRNLIRFLEDGDKTKITLRFRGREMAHQQIGIDVLNRLKEDLSEWAVVESFP 164 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQM+M+L+ K Sbjct: 165 SRVEGRQMVMVLAPKK 180 >gi|299133291|ref|ZP_07026486.1| translation initiation factor IF-3 [Afipia sp. 1NLS2] gi|298593428|gb|EFI53628.1| translation initiation factor IF-3 [Afipia sp. 1NLS2] Length = 200 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + P VCKI+D K ++ QK A EARKKQK IKE+K+RP+I Sbjct: 67 VKMAMDAGMDLVEISPNNNPPVCKIMDYGKYKFQAQKKAAEARKKQKIVEIKEIKLRPMI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K +I++++ + Sbjct: 127 DDHDYDVKMRAMLRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKAAVADIAKVEQDA 186 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 187 RFEGRQVVMVLAPR 200 >gi|269798229|ref|YP_003312129.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008] gi|269094858|gb|ACZ24849.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008] Length = 182 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 49 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ + E + I+ Sbjct: 109 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFADELKETASIEKAA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 169 KLEGRNMTMILVSK 182 >gi|332670156|ref|YP_004453164.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484] gi|332339194|gb|AEE45777.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484] Length = 309 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A+LDLVE+ P VCKI+D K +Y A EAR+ Q +T +KE++ R I Sbjct: 5 LRLAQDADLDLVEVAPDARPPVCKIMDYGKFKYEADMKAREARRNQTNTVLKEIRFRLKI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 65 DPHDYGTKKGHVERFLKAGDKVKVMIMFRGREQSRPEMGIRLLQRLADDVAELGFVESSP 124 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 125 KQDGRNMIMVLGP 137 >gi|325962863|ref|YP_004240769.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter phenanthrenivorans Sphe3] gi|323468950|gb|ADX72635.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter phenanthrenivorans Sphe3] Length = 337 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL E E+ ++ P Sbjct: 80 DTHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFAEDVAEVGVVESSP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 140 RIDGRNMVMVVGP 152 >gi|299066587|emb|CBJ37777.1| Translation initiation factor IF-3 [Ralstonia solanacearum CMR15] Length = 183 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 47 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 107 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEYAQVEQMP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L K Sbjct: 167 KMEGRQMVMMLMPKK 181 >gi|254468803|ref|ZP_05082209.1| translation initiation factor IF-3 [beta proteobacterium KB13] gi|207087613|gb|EDZ64896.1| translation initiation factor IF-3 [beta proteobacterium KB13] Length = 157 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + + DLVEI P VC+++D K +Y K EAR KQK+ +KEVK RP Sbjct: 7 LGKADDFDTDLVEIAPKAEPPVCRLMDYGKFKYAQSKKLHEARMKQKNVQVKEVKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K K++++FRGREI HQ LG +LL ++ E + ++ P Sbjct: 67 DEGDYNVKLRNLIRFLTDGDKAKVTLRFRGREIAHQQLGMDLLKRVETDLEEYAVVEQFP 126 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+LS Sbjct: 127 KMEGRQMVMVLSP 139 >gi|311894943|dbj|BAJ27351.1| putative translation initiation factor IF-3 [Kitasatospora setae KM-6054] Length = 229 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + + E+ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLADDVQELGFVESAP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|328466428|gb|EGF37576.1| translation initiation factor IF-3 [Listeria monocytogenes 1816] Length = 146 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 10 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 70 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 129 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 130 KMDGRSMFLVLAP 142 >gi|115311715|sp|Q39VS8|IF3_GEOMG RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQSHVVVKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + F+ +G K K+++ FRGREI H + G L + +I+ I+ +P Sbjct: 96 DEHDLQFKIKHVRRFIEEGNKAKVTLVFRGREITHMEFGVRALERVASEIEDIAVIEMKP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|71281686|ref|YP_269609.1| translation initiation factor IF-3 [Colwellia psychrerythraea 34H] gi|71147426|gb|AAZ27899.1| translation initiation factor IF-3 [Colwellia psychrerythraea 34H] Length = 185 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A +A +DLVEI + P VC+++D K Y K E RK QK +KE+K RP Sbjct: 49 MDQADDAGVDLVEISPTAKPPVCRVMDYGKFIYEKAKEQKEQRKNQKQIQVKEIKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G KVK++++FRGRE+ HQ+LG +LL+ +K E++ ++ P Sbjct: 109 DEGDYQVKLRNLKRFLEGGDKVKVTLRFRGREMAHQELGLQLLTRVKNDLEELTVLEFFP 168 Query: 121 KF-EGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 169 RRAEGRQMVMVLAPK 183 >gi|288918242|ref|ZP_06412597.1| translation initiation factor IF-3 [Frankia sp. EUN1f] gi|288350412|gb|EFC84634.1| translation initiation factor IF-3 [Frankia sp. EUN1f] Length = 166 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 17 MRLAQEADLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 77 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 136 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 137 KQDGRNMTMVMAP 149 >gi|163867351|ref|YP_001608545.1| translation initiation factor IF-3 [Bartonella tribocorum CIP 105476] gi|189028351|sp|A9ILC8|IF3_BART1 RecName: Full=Translation initiation factor IF-3 gi|161016992|emb|CAK00550.1| translation initiation factor IF-3 [Bartonella tribocorum CIP 105476] Length = 172 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 99/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+K+RP + Sbjct: 39 LAMAAEAGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKVIEIKEIKVRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIDHGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIELEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|21220097|ref|NP_625876.1| translation initiation factor IF-3 [Streptomyces coelicolor A3(2)] gi|7387791|sp|O88060|IF3_STRCO RecName: Full=Translation initiation factor IF-3 gi|3581855|emb|CAA20811.1| putative translation initiation factor IF-3 [Streptomyces coelicolor A3(2)] Length = 217 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 95 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|310825024|ref|YP_003957382.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|309398096|gb|ADO75555.1| Translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 196 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI +P VCK++D K +Y +K A E+++ Q +KEVK+RP Sbjct: 18 LERARTEGLDLVEISPMASPPVCKLMDYGKFKYEEKKKAAESKRAQVVIQLKEVKLRPKT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+ ++FRGREI H++ G +L+++ + ++ ++ P Sbjct: 78 EEHDYEFKVRNMRRFLEEGNKAKVVIQFRGREITHREQGTVILNDVAQDLKDVGVVEQPP 137 Query: 121 KFEGRQMIMILSS 133 + EGR M MIL+ Sbjct: 138 RMEGRLMFMILAP 150 >gi|169829541|ref|YP_001699699.1| translation initiation factor IF-3 [Lysinibacillus sphaericus C3-41] gi|168994029|gb|ACA41569.1| Translation initiation factor IF-3 [Lysinibacillus sphaericus C3-41] Length = 167 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIAARVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+D+G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|154509025|ref|ZP_02044667.1| hypothetical protein ACTODO_01542 [Actinomyces odontolyticus ATCC 17982] gi|293192345|ref|ZP_06609456.1| translation initiation factor IF-3 [Actinomyces odontolyticus F0309] gi|153798659|gb|EDN81079.1| hypothetical protein ACTODO_01542 [Actinomyces odontolyticus ATCC 17982] gi|292820260|gb|EFF79254.1| translation initiation factor IF-3 [Actinomyces odontolyticus F0309] Length = 195 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 17 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + E G+++ ++ P Sbjct: 77 DDHDFGVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLQRLAEEIGDLATVESMP 136 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 137 RQDGRNMTMVLAP 149 >gi|118580722|ref|YP_901972.1| translation initiation factor IF-3 [Pelobacter propionicus DSM 2379] gi|118503432|gb|ABK99914.1| bacterial translation initiation factor 3 (bIF-3) [Pelobacter propionicus DSM 2379] Length = 154 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A++ LDLVE+ + TP VC+I+D K +Y K E+RKKQ +KE+K+RP D Sbjct: 19 ELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESRKKQAHVEVKEIKLRPKTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K+K + FL +G K K+++ FRGREI H D+GR ++ +I+ I+ +P+ Sbjct: 79 DHDLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVIQRFAAELEDIAIIETQPR 138 Query: 122 FEGRQMIMILSSK 134 +GR M MI++ K Sbjct: 139 VDGRNMYMIVAPK 151 >gi|302550252|ref|ZP_07302594.1| translation initiation factor IF-3 [Streptomyces viridochromogenes DSM 40736] gi|302467870|gb|EFL30963.1| translation initiation factor IF-3 [Streptomyces viridochromogenes DSM 40736] Length = 216 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 95 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|134299470|ref|YP_001112966.1| translation initiation factor IF-3 [Desulfotomaculum reducens MI-1] gi|134052170|gb|ABO50141.1| bacterial translation initiation factor 3 (bIF-3) [Desulfotomaculum reducens MI-1] Length = 145 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ + P VC+I+D K +Y K EA+K+Q+ +KEVK+RP I Sbjct: 7 LRLAEEKQLDLVEVAAQAKPPVCRIMDYGKFKYEQSKREKEAKKRQRIIQVKEVKLRPRI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K K + FL+DG KVK+++ FRGREI+H +LGR LL + + +I ++ P Sbjct: 67 EDHDYSTKSKNAERFLKDGDKVKVTIMFRGREIVHTELGRALLERLAQDLKDICIVERHP 126 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 127 KLEGKNMIMILAPK 140 >gi|296135846|ref|YP_003643088.1| translation initiation factor IF-3 [Thiomonas intermedia K12] gi|295795968|gb|ADG30758.1| translation initiation factor IF-3 [Thiomonas intermedia K12] Length = 144 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ ++DLVEI + +P VC+++D K +Y QK EAR KQK IKEVK RP Sbjct: 8 LRLAEQHDVDLVEIAPTASPPVCRLMDYGKFKYEEQKKNHEARSKQKQIQIKEVKFRPAT 67 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K K+S++FRGREI HQD+G +L +K ++ +++ P Sbjct: 68 DDGDYQIKLRNLRRFLEEGDKGKVSLRFRGREITHQDIGMRVLERVKADVEDVGQVEQMP 127 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM++S K Sbjct: 128 KLEGRQMIMVISPKK 142 >gi|320093955|ref|ZP_08025784.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979113|gb|EFW10627.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178 str. F0338] Length = 222 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 44 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + + G+++ ++ P Sbjct: 104 DDHDFAVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLRRLADEIGDLATVESMP 163 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 164 RQDGRNMTMVLAP 176 >gi|121997231|ref|YP_001002018.1| translation initiation factor IF-3 [Halorhodospira halophila SL1] gi|121588636|gb|ABM61216.1| bacterial translation initiation factor 3 (bIF-3) [Halorhodospira halophila SL1] Length = 156 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ LDLVEID + P VC+ +D K ++ K ARKKQK +KEVK RP Sbjct: 20 LAQAENEGLDLVEIDGNADPPVCRAMDYGKFKFEQSKKQQAARKKQKQIQVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ+LG+ LL ++E G++ +D P Sbjct: 80 DEGDFQVKLRNLRRFLEEGDKAKVTIRFRGREMAHQELGKRLLDRLEEELGDVGTVDQRP 139 Query: 121 KFEGRQMIMILSSKC 135 + EGR M+M++S + Sbjct: 140 RMEGRLMVMMMSPRK 154 >gi|296536618|ref|ZP_06898694.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC 49957] gi|296263052|gb|EFH09601.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC 49957] Length = 162 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E +DL+EI + P VCKI D K +Y QK A EARKKQK IKE+K+RP I Sbjct: 29 LLRAYELGMDLLEISPNAVPPVCKITDYGKYKYEQQKKANEARKKQKIVEIKEIKVRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A F+ +G KVK++++FRGRE+ HQDLG ++L I+ E+++++ P Sbjct: 89 DDHDYDVKMRAAKSFIEEGDKVKVTLRFRGREMAHQDLGVKVLERIRTELAELAKVEQMP 148 Query: 121 KFEGRQMIMILSSK 134 + E RQMIM+L+ K Sbjct: 149 RLENRQMIMVLAPK 162 >gi|83748298|ref|ZP_00945323.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Ralstonia solanacearum UW551] gi|207742947|ref|YP_002259339.1| translation initiation factor if-3 protein [Ralstonia solanacearum IPO1609] gi|83725030|gb|EAP72183.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Ralstonia solanacearum UW551] gi|206594342|emb|CAQ61269.1| translation initiation factor if-3 protein [Ralstonia solanacearum IPO1609] Length = 183 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 47 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 107 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L K Sbjct: 167 KMEGRQMVMMLMPKK 181 >gi|296270015|ref|YP_003652647.1| translation initiation factor IF-3 [Thermobispora bispora DSM 43833] gi|296092802|gb|ADG88754.1| translation initiation factor IF-3 [Thermobispora bispora DSM 43833] Length = 199 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ ++ P VCK++D K +Y A EAR+ Q T +KE+K+RP I Sbjct: 35 LRLAQEADLDLVEVAATARPPVCKLMDYGKWKYESAMKAREARRNQAQTVVKEIKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 95 DPHDYETKKGHVERFLRGGDKVKVTIMFRGREQSRPELGYRLLQRLAEDVAELGYVESQP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 155 KQDGRNMIMVIGP 167 >gi|126652713|ref|ZP_01724874.1| translation initiation factor IF-3 [Bacillus sp. B14905] gi|126590562|gb|EAZ84680.1| translation initiation factor IF-3 [Bacillus sp. B14905] Length = 167 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIAARVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+D+G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|50955434|ref|YP_062722.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951916|gb|AAT89617.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 268 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V KI+D K +Y + A EAR+ Q +T +KEV+ R I Sbjct: 83 IRLAQEADLDLVEVAPNSKPPVAKIMDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKI 142 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K +GFL+ G KVK + FRGRE + G LL E E+ ++ P Sbjct: 143 DKHDYETKRKRAEGFLQAGDKVKAMILFRGREQSRPEQGVRLLQRFAEDVAELGTVESNP 202 Query: 121 KFEGRQMIMILSS 133 +GR M+MI+S Sbjct: 203 TIDGRNMVMIISP 215 >gi|222084528|ref|YP_002543057.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84] gi|221721976|gb|ACM25132.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84] Length = 183 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 50 LRMAEEAGLDLVEISPNAEAPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KAI F +G KVK+++KFRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 110 DTHDYEVKMKAIGRFFEEGDKVKVTLKFRGREMAHQELGMKLLQQVKEDTVEIAKVEAEP 169 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 170 KLEGRQMMMVLAPK 183 >gi|37521325|ref|NP_924702.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421] gi|39931208|sp|Q7NJS6|IF3_GLOVI RecName: Full=Translation initiation factor IF-3 gi|35212322|dbj|BAC89697.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421] Length = 199 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 64 LRIAEERNLDLVVVSEDAQPPVCRIMDYGKYKFEQEKRAKEARKKQHTADVKEVKMRYTI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV+L+ FL+DG KVK ++ FRGREI H +L ++LL + EI + EP Sbjct: 124 GEHDYQVRLRDTIRFLKDGDKVKATIMFRGREIQHANLAKDLLMQLAADSAEIGEVQQEP 183 Query: 121 KFEGRQMIMILSSK 134 EGR MIMILS K Sbjct: 184 SVEGRNMIMILSPK 197 >gi|85710710|ref|ZP_01041774.1| translation initiation factor 3 [Erythrobacter sp. NAP1] gi|85687888|gb|EAQ27893.1| translation initiation factor 3 [Erythrobacter sp. NAP1] Length = 172 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 94/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ L+LVE+ + P VCK LD+ K RY QK A ARK QK+ IKEVKMRP I Sbjct: 39 VEQAQDKGLNLVEVSPNADPPVCKFLDVGKYRYEAQKKANAARKTQKTQDIKEVKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ ++ F+ G KVK++++FRGRE+ HQ LG +LL ++E EI++++ P Sbjct: 99 DTHDYDVKMRNVNKFIDQGDKVKVTLRFRGREMAHQHLGMDLLKRVQEDVEEIAKVEAFP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RLEGRQMLMVLAPK 172 >gi|315604407|ref|ZP_07879473.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180 str. F0310] gi|315314113|gb|EFU62164.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180 str. F0310] Length = 195 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P V K++D K +Y + A +AR+ Q +T +KE++ R I Sbjct: 17 LRLAEEAGLDLVEVAPNAKPPVAKLMDYGKYKYEAAQKARDARRNQANTQLKEIRFRLKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK ++ FL G KVK+ + FRGRE + G LL + E GE++ ++ P Sbjct: 77 DDHDFGVKKGHVERFLSAGDKVKVMIMFRGREQSRPEAGVRLLQRLAEEIGELATVESMP 136 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 137 RQDGRNMTMVLAP 149 >gi|27375821|ref|NP_767350.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA 110] gi|39931279|sp|Q89WH7|IF3_BRAJA RecName: Full=Translation initiation factor IF-3 gi|27348959|dbj|BAC45975.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA 110] Length = 179 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA +DLVEI + +P VCKI+D K +Y+ QK A EARK+QK+ IKE+K+RP+I Sbjct: 46 IKMAQEAGMDLVEISPNTSPPVCKIMDYGKYKYSAQKKAAEARKRQKTVEIKEIKLRPMI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQ++G +LL IK E+++++ + Sbjct: 106 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDA 165 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 166 RFEGRQVVMVLAPR 179 >gi|229916378|ref|YP_002885024.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b] gi|229467807|gb|ACQ69579.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b] Length = 176 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLV + P V KI+D K R+ +QK EARK QK +KEV++ P I Sbjct: 40 LRLAEEAELDLVLVADKANPPVAKIMDYGKYRFELQKKEKEARKNQKVIQMKEVRLSPTI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D Q KL+ FL G KVK S++FRGR I H ++G+ +L + +++ ++ +P Sbjct: 100 EDNDFQTKLRNARKFLEKGNKVKASIRFRGRAITHSEIGKRVLDKMAAECADLATVEQKP 159 Query: 121 KFEGRQMIMILSS 133 K EGR M ++L+ Sbjct: 160 KMEGRSMFLVLAP 172 >gi|239932314|ref|ZP_04689267.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] gi|291440678|ref|ZP_06580068.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] gi|291343573|gb|EFE70529.1| translation initiation factor IF-3 [Streptomyces ghanaensis ATCC 14672] Length = 199 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|309810986|ref|ZP_07704784.1| translation initiation factor IF-3 [Dermacoccus sp. Ellin185] gi|308434950|gb|EFP58784.1| translation initiation factor IF-3 [Dermacoccus sp. Ellin185] Length = 242 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y A E+RK Q +T IKE+K+RP I Sbjct: 60 LRLAAEADLDLVEVAPQAKPPVAKLMDFGKFKYEAAMKARESRKNQVNTVIKEIKLRPKI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL G KVK+++ FRGRE +LG LL + E E++ I+ P Sbjct: 120 DQHDYDTKKGHVVRFLSAGDKVKVTIMFRGREQSRPELGFRLLQKLAEDVQELAFIESAP 179 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L Sbjct: 180 KQDGRNMVMVLGP 192 >gi|295397489|ref|ZP_06807572.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563] gi|294974289|gb|EFG50033.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563] Length = 198 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLV + + P V +I+D K RY Q+ E R+ QK +KEV++ P I Sbjct: 62 LDKAEQVELDLVLVSPNAKPPVARIMDYGKYRYEQQRKEREQRQNQKQVSLKEVRLSPTI 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KL+ FL G KVK S++FRGR I H+++GRE+L E +++ ++ P Sbjct: 122 EQNDFDTKLRQARKFLEKGDKVKASIRFRGRAITHKEIGREVLERFAEELKDVAEVEQRP 181 Query: 121 KFEGRQMIMILSS 133 K EGR M + ++ Sbjct: 182 KMEGRSMFLQMAP 194 >gi|299535483|ref|ZP_07048805.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1] gi|298729244|gb|EFI69797.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1] Length = 167 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 31 LEIATRVNLDLVLVAPQAKPPVARIMDYGKFKFEQQKKDREIRKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL+ FL G KVK S++F+GR I H+++G+ +L E E+S ++ +P Sbjct: 91 DEHDFQTKLRNAIKFLEKGDKVKCSLRFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M ++L K Sbjct: 151 KMEGRSMFLVLQPK 164 >gi|255973983|ref|ZP_05424569.1| initiation factor 3 [Enterococcus faecalis T2] gi|255966855|gb|EET97477.1| initiation factor 3 [Enterococcus faecalis T2] Length = 173 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+ +L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQNVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|312139882|ref|YP_004007218.1| translation initiation factor 3 infc [Rhodococcus equi 103S] gi|325674240|ref|ZP_08153929.1| translation initiation factor IF3 [Rhodococcus equi ATCC 33707] gi|311889221|emb|CBH48535.1| translation initiation factor 3 InfC [Rhodococcus equi 103S] gi|325554920|gb|EGD24593.1| translation initiation factor IF3 [Rhodococcus equi ATCC 33707] Length = 173 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRVALEADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKRNVIRFLEAGSKVKVTIMFRGREQSRPELGFRLLQRLGADVADLGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|269795538|ref|YP_003314993.1| translation initiation factor 3 [Sanguibacter keddieii DSM 10542] gi|269097723|gb|ACZ22159.1| bacterial translation initiation factor 3 (bIF-3) [Sanguibacter keddieii DSM 10542] Length = 329 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+A+LDLVE+ P VCK++D K +Y A EAR+ Q +T +KE++ R I Sbjct: 52 LSLAQDADLDLVEVAPDARPPVCKLMDYGKFKYESDMKAREARRNQANTVLKEIRFRLKI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + E E+ I+ P Sbjct: 112 DPHDYGTKKGHVERFLSAGDKVKVMIMFRGREQSRPEMGVRLLQRLAEDVQELGFIESMP 171 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 172 KQDGRNMIMVLGP 184 >gi|193222338|emb|CAL61955.2| Translation initiation factor IF-3 [Herminiimonas arsenicoxydans] Length = 156 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK IKEVK RP D Sbjct: 21 RLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKVILIKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K +++ PK Sbjct: 81 DGDYNIKLRNLIKFLDDGDKTKITLRFRGREMAHQDIGFRMLERLKADLEPYGQVEQFPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|138896279|ref|YP_001126732.1| translation initiation factor IF3 [Geobacillus thermodenitrificans NG80-2] gi|134267792|gb|ABO67987.1| Translation initiation factor IF3 [Geobacillus thermodenitrificans NG80-2] Length = 130 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV + + P VC+I+D K R+ QK EARKKQK IKEV++ P I+ HD K Sbjct: 1 MDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINIKEVRLSPTIEEHDFNTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ FL G KVK +++F+GR I H+++G+ +L E +I+ ++ PK EGR M Sbjct: 61 LRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRFSEACADIAVVETAPKLEGRNMF 120 Query: 129 MILSSK 134 ++L+ K Sbjct: 121 LVLAPK 126 >gi|258515612|ref|YP_003191834.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans DSM 771] gi|257779317|gb|ACV63211.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans DSM 771] Length = 164 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+E L+LVEI P VC+I+D K +Y K E RKKQ+ +KEVK+RP I Sbjct: 29 MRLAEEKQLELVEIAPQAKPPVCRIMDYGKYKYEQSKREKETRKKQRIISVKEVKLRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK K FL+DG KVK+++ FRGREI+H +LG++LL + E+ +I+ ++ P Sbjct: 89 EEHDFEVKAKNAVRFLKDGDKVKVTIMFRGREIVHTNLGQQLLVKMAEQVKDIATVERHP 148 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 149 KLEGKNMIMILAPK 162 >gi|134095005|ref|YP_001100080.1| protein chain initiation factor IF-3 [Herminiimonas arsenicoxydans] Length = 154 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK IKEVK RP D Sbjct: 19 RLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKVILIKEVKFRPGTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K +++ PK Sbjct: 79 DGDYNIKLRNLIKFLDDGDKTKITLRFRGREMAHQDIGFRMLERLKADLEPYGQVEQFPK 138 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 139 MEGRQMIMVLSPKK 152 >gi|222056446|ref|YP_002538808.1| translation initiation factor IF-3 [Geobacter sp. FRC-32] gi|221565735|gb|ACM21707.1| translation initiation factor IF-3 [Geobacter sp. FRC-32] Length = 154 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 17 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQVQVQLKEVKLRPKT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + FL +G K KI+V FRGREI HQ+LG L N +I ++ + Sbjct: 77 DEHDLQFKIKHVRRFLEEGNKAKITVVFRGREITHQELGMSALDNFASELQDIGIVEVKQ 136 Query: 121 KFEGRQMIMILSSKC 135 K EGR M +I++ K Sbjct: 137 KMEGRSMFIIVAPKT 151 >gi|72162465|ref|YP_290122.1| translation initiation factor 3 [Thermobifida fusca YX] gi|71916197|gb|AAZ56099.1| bacterial translation initiation factor 3 (bIF-3) [Thermobifida fusca YX] Length = 179 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V K++D K +Y A EARK Q ST IKE+K+RP I Sbjct: 23 LRLAQEADLDLVEVAPTARPPVAKLMDYGKFKYESAVKAREARKNQSSTVIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FLR G KVK+++ FRGRE +LG LL + E E+ +++ + Sbjct: 83 DQHDYETKKGHVERFLRSGDKVKVTIMFRGREQSRPELGYRLLRRLAEDVQELGQVESQA 142 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L Sbjct: 143 KQDGRNMVMVLGP 155 >gi|302866848|ref|YP_003835485.1| translation initiation factor IF-3 [Micromonospora aurantiaca ATCC 27029] gi|315503263|ref|YP_004082150.1| translation initiation factor if-3 [Micromonospora sp. L5] gi|302569707|gb|ADL45909.1| translation initiation factor IF-3 [Micromonospora aurantiaca ATCC 27029] gi|315409882|gb|ADU07999.1| translation initiation factor IF-3 [Micromonospora sp. L5] Length = 215 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ ++ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITDLGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|284045074|ref|YP_003395414.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684] gi|283949295|gb|ADB52039.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684] Length = 357 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE +LDLVE+ + P VC+ILD K RY + ARK Q+ I+E+K RP I Sbjct: 47 LRMAQERDLDLVEVAADARPPVCRILDYSKYRYEQAQKQKAARKHQQQITIREIKFRPKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D K + FL+ KVK+++ FRGRE+ H + G+ LL + E +++ ++ P Sbjct: 107 AQNDYDTKKGHVTRFLKHKDKVKVTIMFRGREVTHPERGQILLERLAEELADLAVVEQRP 166 Query: 121 KFEGRQMIMILSS-KCV 136 +GR M M+L K V Sbjct: 167 IQDGRNMTMMLGPSKAV 183 >gi|194289384|ref|YP_002005291.1| translation initiation factor if-3 [Cupriavidus taiwanensis LMG 19424] gi|193223219|emb|CAQ69224.1| Translation initiation factor IF-3 [Cupriavidus taiwanensis LMG 19424] Length = 140 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + TP V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 4 LRLAEDKDLDLVEIAPNATPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K EI +++ P Sbjct: 64 DDGDYNVKLRNLKRFLEDGDKTKITLRFRGREMAHQEIGARMLERLKADLEEIGQVEQMP 123 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 124 KMEGRQMVMVLAPKK 138 >gi|296140120|ref|YP_003647363.1| translation initiation factor IF-3 [Tsukamurella paurometabola DSM 20162] gi|296028254|gb|ADG79024.1| translation initiation factor IF-3 [Tsukamurella paurometabola DSM 20162] Length = 196 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCKI+D K +Y + E+RK Q+ T IKE K+RP I Sbjct: 35 LKLAYEADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKQRESRKNQQMTVIKEQKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + E I+ Sbjct: 95 DDHDYETKKGHVVRFLEQGSKVKVTIMFRGREQSRPELGFRLLQRLGADVAEYGFIETSA 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 155 KQDGRNMTMVLAP 167 >gi|256788790|ref|ZP_05527221.1| translation initiation factor IF-3 [Streptomyces lividans TK24] Length = 202 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|254500562|ref|ZP_05112713.1| translation initiation factor IF-3, C-terminal domain, putative [Labrenzia alexandrii DFL-11] gi|222436633|gb|EEE43312.1| translation initiation factor IF-3, C-terminal domain, putative [Labrenzia alexandrii DFL-11] Length = 135 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 96/133 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A +A LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP I Sbjct: 1 MGIAMDAGLDLVEIQPNANPPVCKILDYGRYKYQAQKKAAEARKKQKTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K + F DG KVK++++FRGRE+ HQDLG +LL +++ EI++++ P Sbjct: 61 DTHDYEVKMKNMLRFFNDGDKVKVTLRFRGREMAHQDLGMKLLHKVRDETSEIAKVESHP 120 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 121 KLEGRQMVMVLAP 133 >gi|69248640|ref|ZP_00604785.1| Initiation factor 3 [Enterococcus faecium DO] gi|68194365|gb|EAN08874.1| Initiation factor 3 [Enterococcus faecium DO] Length = 167 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 30 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 90 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 149 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 150 KMDGRSMFLTLAPK 163 >gi|116250034|ref|YP_765872.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. viciae 3841] gi|115254682|emb|CAK05756.1| putative translation initiation factor [Rhizobium leguminosarum bv. viciae 3841] Length = 195 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 62 LRMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 122 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEP 181 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 182 KLEGRQMMMVLAPK 195 >gi|229820871|ref|YP_002882397.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM 12333] gi|229566784|gb|ACQ80635.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM 12333] Length = 192 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P V K++D K +Y A +AR+ Q +T +KE++ R I Sbjct: 23 LRLAEEADLDLVEVAPDARPPVAKLMDFGKFKYESAMKARDARRNQANTVLKEIRFRLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL G KVK+ + FRGRE ++G LL + + E+ ++ P Sbjct: 83 DPHDYGTKKGHVERFLTAGDKVKVMIMFRGREQSRPEMGMRLLQRLADDVAELGHVESTP 142 Query: 121 KFEGRQMIMILSS 133 + +GR M M+++ Sbjct: 143 RLDGRNMTMVIAP 155 >gi|284053146|ref|ZP_06383356.1| translation initiation factor IF-3 [Arthrospira platensis str. Paraca] gi|291570597|dbj|BAI92869.1| translation initiation factor IF-3 [Arthrospira platensis NIES-39] Length = 181 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE LDLV + P VC+I+D K +Y +K EARKKQ + +KEVKMR I Sbjct: 43 MKLAQEKELDLVLVSDKADPPVCRIMDYGKFKYEQEKKVREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L RELL + E E + + P Sbjct: 103 DDHDYQVRVNQAKRFLKSGDKVKATIMFRGREIQHSNLARELLKRMAEDLEEHAEVQQSP 162 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M+L+ K Sbjct: 163 KQEGRSMMMLLAPKKT 178 >gi|303229418|ref|ZP_07316208.1| translation initiation factor IF-3 [Veillonella atypica ACS-134-V-Col7a] gi|302515954|gb|EFL57906.1| translation initiation factor IF-3 [Veillonella atypica ACS-134-V-Col7a] Length = 182 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 49 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 109 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 169 KLEGRNMTMILVSK 182 >gi|295113895|emb|CBL32532.1| bacterial translation initiation factor 3 (bIF-3) [Enterococcus sp. 7L76] Length = 167 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 91 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 151 KMDGRSMFLTLAPK 164 >gi|302561588|ref|ZP_07313930.1| translation initiation factor IF-3 [Streptomyces griseoflavus Tu4000] gi|302479206|gb|EFL42299.1| translation initiation factor IF-3 [Streptomyces griseoflavus Tu4000] Length = 198 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ ++ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQDLGFVESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|326440156|ref|ZP_08214890.1| translation initiation factor IF-3 [Streptomyces clavuligerus ATCC 27064] Length = 192 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 20 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 80 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 140 KQDGRNMIMVLGP 152 >gi|309792160|ref|ZP_07686632.1| translation initiation factor IF-3 [Oscillochloris trichoides DG6] gi|308225701|gb|EFO79457.1| translation initiation factor IF-3 [Oscillochloris trichoides DG6] Length = 217 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 83/131 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+E LDLVE+ + P VC++LD K RY K EARK QK +K++++ P D Sbjct: 7 LAEERGLDLVEVAPNAVPPVCRLLDYGKFRYEQSKKEREARKNQKQAELKQIRLMPKTDD 66 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HDL+VK FL G KVK +V+FRGRE+ H D+GR++L I E+ +IS ++ +P Sbjct: 67 HDLEVKANQARRFLLGGDKVKFNVRFRGREMAHPDIGRKMLEQIAEQLRDISVVEQKPLM 126 Query: 123 EGRQMIMILSS 133 EGR + ++L+ Sbjct: 127 EGRVLSLLLAP 137 >gi|294010777|ref|YP_003544237.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S] gi|292674107|dbj|BAI95625.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S] Length = 177 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K +Y QK A ARK Q++ IKE+KMRP I Sbjct: 44 IERAYEIGLDLVEVSPNADPPVCKFLDIGKYKYEAQKKANLARKTQRTQEIKEIKMRPNI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K + F+ +G KVKI+++FRGRE+ HQ LG +LL + E GEI++++ P Sbjct: 104 DDHDYDTKMKKVHDFIGEGDKVKITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 164 RMEGRQMLMVLAPK 177 >gi|284802229|ref|YP_003414094.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578] gi|284995371|ref|YP_003417139.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923] gi|284057791|gb|ADB68732.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578] gi|284060838|gb|ADB71777.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923] Length = 167 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 31 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+++L + ++ I+ P Sbjct: 91 DEHDFDTKLRKARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRP 150 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 151 KMDGRSMFLVLAP 163 >gi|184201213|ref|YP_001855420.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201] gi|183581443|dbj|BAG29914.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201] Length = 314 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E++LDLVE+ + P V K++D K +Y A E+RK Q +T +KEV+ R I Sbjct: 34 LRLARESDLDLVEVAPNAKPPVAKLMDFGKYKYEAAVKARESRKNQANTVLKEVRFRLKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE +G LL + E E+ ++ P Sbjct: 94 DTHDYETKVGHAKRFLSAGDKVKAMIQFRGREQQRPAMGVRLLERLAEDVAEVGVVETAP 153 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 154 RVDGRNMVMVIGP 166 >gi|169629407|ref|YP_001703056.1| translation initiation factor IF-3 (InfC) [Mycobacterium abscessus ATCC 19977] gi|169241374|emb|CAM62402.1| Translation initiation factor IF-3 (InfC) [Mycobacterium abscessus] Length = 176 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +A+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T +KE K+RP I Sbjct: 7 LRVAADADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVVKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + ++ Sbjct: 67 DDHDYETKKGHVVRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLGADVADYGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|121601938|ref|YP_989588.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583] gi|166198949|sp|A1UUD5|IF3_BARBK RecName: Full=Translation initiation factor IF-3 gi|120614115|gb|ABM44716.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583] Length = 173 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 74/135 (54%), Positives = 96/135 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+K+RP + Sbjct: 39 LAMAANIGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAETRKKQKIIEIKEIKLRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIEHGNKVKITLRFRGREMAHQDLGVKLLERMKEDVSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSKC 135 K E RQM+M+++ K Sbjct: 159 KLENRQMMMVIAPKS 173 >gi|148555658|ref|YP_001263240.1| translation initiation factor IF-3 [Sphingomonas wittichii RW1] gi|148500848|gb|ABQ69102.1| bacterial translation initiation factor 3 (bIF-3) [Sphingomonas wittichii RW1] Length = 169 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 36 IEQAQEAGLDLVEVSPNADPPVCKFLDVGKFKYEAQKKANLARKSQKTQEIKEIKMRPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K I F+ +G KVK++++FRGRE+ H LG ++L ++ E ++++ P Sbjct: 96 DDHDYETKMKKIHEFIDEGDKVKVTLRFRGRELAHGQLGMQVLQRVQADMAETAKVEQFP 155 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 156 RMEGRQMLMVIAPK 169 >gi|304404966|ref|ZP_07386626.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] gi|304345845|gb|EFM11679.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] Length = 135 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA + ++DLV + P VC+I+D K RY QK EARK QK +KEV R I+ Sbjct: 1 MAIDLSMDLVNVAPQAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDLKEVWFRSNIEE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q KL+ + FL++G KVK SV++RGREI H +G+ +L + + E+ ++ PK Sbjct: 61 NDYQTKLRNVVKFLKEGDKVKCSVRYRGREIAHAAIGQRILDRLSKEVAELCSVERVPKL 120 Query: 123 EGRQMIMILSSK 134 EGR MIMIL+ K Sbjct: 121 EGRSMIMILAPK 132 >gi|258592605|emb|CBE68914.1| Translation initiation factor IF-3 [NC10 bacterium 'Dutch sediment'] Length = 163 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDLVE+ P VC+I++ K RY K EARKKQ IKE+K+RP Sbjct: 29 LETAQKLALDLVEVAPDAKPPVCRIMNYGKYRYEQNKKTREARKKQTVIQIKEIKLRPKT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + + FL++G K K+++ FRGRE++H + G+ L E EI+ ++ P Sbjct: 89 DEHDFQFKSRHAERFLKEGNKTKVTLMFRGREMVHIERGKAQLDRFAEALKEIAVLEQYP 148 Query: 121 KFEGRQMIMILSSK 134 + EGR M+MIL+ K Sbjct: 149 RQEGRNMVMILTPK 162 >gi|119961908|ref|YP_947378.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1] gi|119948767|gb|ABM07678.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1] Length = 344 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPQAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL E E+ I+ P Sbjct: 80 DKHDYETKRGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLQRFAEDVAEVGIIESSP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 140 RIDGRNMVMVIGP 152 >gi|314923958|gb|EFS87789.1| translation initiation factor IF-3 [Propionibacterium acnes HL001PA1] Length = 213 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVAKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|258615039|ref|ZP_05712809.1| translation initiation factor IF-3 [Enterococcus faecium DO] Length = 168 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 31 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 91 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 151 KMDGRSMFLTLAPK 164 >gi|237745471|ref|ZP_04575951.1| translation initiation factor IF-3 [Oxalobacter formigenes HOxBLS] gi|229376822|gb|EEO26913.1| translation initiation factor IF-3 [Oxalobacter formigenes HOxBLS] Length = 156 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 89/134 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP D Sbjct: 21 KLAEEADVDLVEIAPNARPPVCRLMDYGKFKYAEQKKAHEAKLKQKVISVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL DG K K++++FRGRE+ HQD+G +L +K+ +++ PK Sbjct: 81 EGDYNIKLRNLIKFLEDGDKCKVTLRFRGREMAHQDIGFRMLERLKQDLDPYGQVEQFPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ + Sbjct: 141 MEGRQMVMVLAPRK 154 >gi|163839501|ref|YP_001623906.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC 33209] gi|162952977|gb|ABY22492.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC 33209] Length = 353 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ P VCK++D K +Y A EARK Q +T +KE++ R I Sbjct: 20 LRLAAESDLDLVEVAPMAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K FL G KVK ++FRGRE ++G LL+ E E+ ++ P Sbjct: 80 DKHDYETKTGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLNRFAEDVTEVGAVESTP 139 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 140 RIDGRNMVMVIGP 152 >gi|190889925|ref|YP_001976467.1| translation initiation factor IF-3 protein [Rhizobium etli CIAT 652] gi|190695204|gb|ACE89289.1| translation initiation factor IF-3 protein [Rhizobium etli CIAT 652] Length = 168 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 35 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EP Sbjct: 95 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEP 154 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 155 KLEGRQMMMVLAPK 168 >gi|145295514|ref|YP_001138335.1| translation initiation factor IF-3 [Corynebacterium glutamicum R] gi|166198956|sp|A4QDY1|IF3_CORGB RecName: Full=Translation initiation factor IF-3 gi|140845434|dbj|BAF54433.1| hypothetical protein [Corynebacterium glutamicum R] Length = 189 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 52 KLAFDADLDLVEVAPNAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 111 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + ++ K Sbjct: 112 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVADFGIVETRAK 171 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 172 QDGRNMTMVLGP 183 >gi|241207213|ref|YP_002978309.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861103|gb|ACS58770.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 204 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 71 LKMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 130 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 131 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEP 190 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 191 KLEGRQMMMVLAPK 204 >gi|303230813|ref|ZP_07317560.1| translation initiation factor IF-3 [Veillonella atypica ACS-049-V-Sch6] gi|302514573|gb|EFL56568.1| translation initiation factor IF-3 [Veillonella atypica ACS-049-V-Sch6] Length = 184 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 51 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 111 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 170 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 171 KLEGRNMTMILVSK 184 >gi|260907211|ref|ZP_05915533.1| translation initiation factor IF-3 [Brevibacterium linens BL2] Length = 192 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ P V K++D K +Y + A EARK Q +T +KE++ R I Sbjct: 18 LDLAREADLDLVEVAPQAKPPVAKLMDYGKFKYESAQKAREARKNQANTALKEIRFRLKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G +LL+ + E E+ ++ P Sbjct: 78 DEHDYETKKGHVTRFLSGGDKVKVMIMFRGREQSRPEMGIKLLNRLAEDVSELGTVESSP 137 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+++ Sbjct: 138 RVDGRNMVMVIAP 150 >gi|225024915|ref|ZP_03714107.1| hypothetical protein EIKCOROL_01803 [Eikenella corrodens ATCC 23834] gi|224942319|gb|EEG23528.1| hypothetical protein EIKCOROL_01803 [Eikenella corrodens ATCC 23834] Length = 193 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 58 LAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ + FL DG KVKI+++FRGRE+ HQ LG +LL +K E++ ++ P Sbjct: 118 DEGDYQIKMRNVTRFLTDGDKVKITLRFRGREMAHQHLGAQLLERVKADLAEVAAVEQFP 177 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 178 KMEGRQMVMMVAPKK 192 >gi|86355918|ref|YP_467810.1| translation initiation factor IF-3 [Rhizobium etli CFN 42] gi|86280020|gb|ABC89083.1| translation initiation factor IF-3 protein [Rhizobium etli CFN 42] Length = 168 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 35 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EP Sbjct: 95 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEP 154 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 155 KLEGRQMMMVLAPK 168 >gi|13474222|ref|NP_105790.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099] gi|20138505|sp|Q98CP5|IF3_RHILO RecName: Full=Translation initiation factor IF-3 gi|14024974|dbj|BAB51576.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099] Length = 178 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP I Sbjct: 45 LLLAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EP Sbjct: 105 DSHDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 165 KLEGRQMMMVLAPR 178 >gi|304393066|ref|ZP_07374995.1| translation initiation factor IF-3 [Ahrensia sp. R2A130] gi|303294831|gb|EFL89202.1| translation initiation factor IF-3 [Ahrensia sp. R2A130] Length = 151 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P +CKILD K +Y QK A EARKKQK+ +KE+KMRP I Sbjct: 18 LEMARDAGLDLVEISPTNRPPICKILDFGKYKYAAQKKAAEARKKQKTVEVKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK++++ F +G KVK++++FRGRE+ H +LG +LL +KE EI++++ EP Sbjct: 78 DTHDYEVKMRSVFRFFEEGDKVKVTLRFRGREMAHMNLGMDLLKKVKEDTDEIAKVEAEP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 138 KLEGRQMMMVLAPR 151 >gi|113867358|ref|YP_725847.1| translation initiation factor 3 [Ralstonia eutropha H16] gi|113526134|emb|CAJ92479.1| translation initiation factor 3 (IF-3) [Ralstonia eutropha H16] Length = 140 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P V +I+D K +Y K A EA+ KQK +KEVK RP Sbjct: 4 LRLAEDKDLDLVEIAPNAVPPVARIMDYGKFKYEEAKRAHEAKLKQKIIQVKEVKFRPGT 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K EI +++ P Sbjct: 64 DDGDYNVKLRNLKRFLEDGDKTKITLRFRGREMAHQEIGARMLERLKADLEEIGQVEQMP 123 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 124 KMEGRQMVMVLAPKK 138 >gi|85374713|ref|YP_458775.1| translation initiation factor IF-3 [Erythrobacter litoralis HTCC2594] gi|84787796|gb|ABC63978.1| translation initiation factor 3 [Erythrobacter litoralis HTCC2594] Length = 172 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE L+LVE+ + P V K LD+ K RY QK A ARK QK+ IKEVKMRP I Sbjct: 39 MEQAQEKGLNLVEVSPNADPPVAKFLDVGKYRYEAQKKANLARKTQKTQDIKEVKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++ ++ F+ +G KVK++++FRGRE+ HQ+LG +LL+ +++ EI++++ P Sbjct: 99 DTHDYDVKMRNVNKFIENGDKVKVTLRFRGREMAHQNLGMDLLNRVRDDVEEIAKVEAFP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RLEGRQMLMVLAPK 172 >gi|29375498|ref|NP_814652.1| translation initiation factor IF-3 [Enterococcus faecalis V583] gi|227517833|ref|ZP_03947882.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104] gi|227555025|ref|ZP_03985072.1| translation initiation factor IF-3 [Enterococcus faecalis HH22] gi|229546758|ref|ZP_04435483.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322] gi|229548850|ref|ZP_04437575.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC 29200] gi|255971364|ref|ZP_05421950.1| translation initiation factor IF-3 [Enterococcus faecalis T1] gi|256617782|ref|ZP_05474628.1| initiation factor 3 [Enterococcus faecalis ATCC 4200] gi|256761668|ref|ZP_05502248.1| translation initiation factor IF-3 [Enterococcus faecalis T3] gi|256854243|ref|ZP_05559607.1| translation initiation factor IF-3 [Enterococcus faecalis T8] gi|256957230|ref|ZP_05561401.1| initiation factor 3 [Enterococcus faecalis DS5] gi|256964267|ref|ZP_05568438.1| initiation factor 3 [Enterococcus faecalis HIP11704] gi|257077798|ref|ZP_05572159.1| initiation factor 3 [Enterococcus faecalis JH1] gi|257081157|ref|ZP_05575518.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol] gi|257083826|ref|ZP_05578187.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1] gi|257086251|ref|ZP_05580612.1| initiation factor 3 [Enterococcus faecalis D6] gi|257089324|ref|ZP_05583685.1| translation initiation factor IF-3 [Enterococcus faecalis CH188] gi|257415476|ref|ZP_05592470.1| initiation factor 3 [Enterococcus faecalis AR01/DG] gi|257418508|ref|ZP_05595502.1| initiation factor [Enterococcus faecalis T11] gi|257421158|ref|ZP_05598148.1| translation initiation factor IF-3 [Enterococcus faecalis X98] gi|294781324|ref|ZP_06746670.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1] gi|300860032|ref|ZP_07106120.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD Ef11] gi|307267989|ref|ZP_07549377.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248] gi|307271913|ref|ZP_07553181.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855] gi|307275331|ref|ZP_07556474.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134] gi|307278391|ref|ZP_07559466.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860] gi|307286721|ref|ZP_07566807.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109] gi|307290930|ref|ZP_07570820.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411] gi|312901544|ref|ZP_07760817.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470] gi|312904474|ref|ZP_07763633.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635] gi|312952819|ref|ZP_07771681.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102] gi|39931262|sp|Q837C9|IF3_ENTFA RecName: Full=Translation initiation factor IF-3 gi|29342958|gb|AAO80722.1| translation initiation factor IF-3 [Enterococcus faecalis V583] gi|227074723|gb|EEI12686.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104] gi|227175851|gb|EEI56823.1| translation initiation factor IF-3 [Enterococcus faecalis HH22] gi|229306079|gb|EEN72075.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC 29200] gi|229308107|gb|EEN74094.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322] gi|255962382|gb|EET94858.1| translation initiation factor IF-3 [Enterococcus faecalis T1] gi|256597309|gb|EEU16485.1| initiation factor 3 [Enterococcus faecalis ATCC 4200] gi|256682919|gb|EEU22614.1| translation initiation factor IF-3 [Enterococcus faecalis T3] gi|256709803|gb|EEU24847.1| translation initiation factor IF-3 [Enterococcus faecalis T8] gi|256947726|gb|EEU64358.1| initiation factor 3 [Enterococcus faecalis DS5] gi|256954763|gb|EEU71395.1| initiation factor 3 [Enterococcus faecalis HIP11704] gi|256985828|gb|EEU73130.1| initiation factor 3 [Enterococcus faecalis JH1] gi|256989187|gb|EEU76489.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol] gi|256991856|gb|EEU79158.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1] gi|256994281|gb|EEU81583.1| initiation factor 3 [Enterococcus faecalis D6] gi|256998136|gb|EEU84656.1| translation initiation factor IF-3 [Enterococcus faecalis CH188] gi|257157304|gb|EEU87264.1| initiation factor 3 [Enterococcus faecalis ARO1/DG] gi|257160336|gb|EEU90296.1| initiation factor [Enterococcus faecalis T11] gi|257162982|gb|EEU92942.1| translation initiation factor IF-3 [Enterococcus faecalis X98] gi|294451660|gb|EFG20116.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1] gi|300850850|gb|EFK78599.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD Ef11] gi|306498000|gb|EFM67527.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411] gi|306502199|gb|EFM71483.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109] gi|306504897|gb|EFM74092.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860] gi|306507965|gb|EFM77092.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134] gi|306511419|gb|EFM80421.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855] gi|306515630|gb|EFM84157.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248] gi|310629335|gb|EFQ12618.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102] gi|310632172|gb|EFQ15455.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635] gi|311291339|gb|EFQ69895.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470] gi|315027099|gb|EFT39031.1| translation initiation factor IF-3 [Enterococcus faecalis TX2137] gi|315029784|gb|EFT41716.1| translation initiation factor IF-3 [Enterococcus faecalis TX4000] gi|315032457|gb|EFT44389.1| translation initiation factor IF-3 [Enterococcus faecalis TX0017] gi|315034309|gb|EFT46241.1| translation initiation factor IF-3 [Enterococcus faecalis TX0027] gi|315145799|gb|EFT89815.1| translation initiation factor IF-3 [Enterococcus faecalis TX2141] gi|315148071|gb|EFT92087.1| translation initiation factor IF-3 [Enterococcus faecalis TX4244] gi|315149673|gb|EFT93689.1| translation initiation factor IF-3 [Enterococcus faecalis TX0012] gi|315152986|gb|EFT97002.1| translation initiation factor IF-3 [Enterococcus faecalis TX0031] gi|315155217|gb|EFT99233.1| translation initiation factor IF-3 [Enterococcus faecalis TX0043] gi|315157544|gb|EFU01561.1| translation initiation factor IF-3 [Enterococcus faecalis TX0312] gi|315163027|gb|EFU07044.1| translation initiation factor IF-3 [Enterococcus faecalis TX0645] gi|315165226|gb|EFU09243.1| translation initiation factor IF-3 [Enterococcus faecalis TX1302] gi|315167951|gb|EFU11968.1| translation initiation factor IF-3 [Enterococcus faecalis TX1341] gi|315172016|gb|EFU16033.1| translation initiation factor IF-3 [Enterococcus faecalis TX1342] gi|315174843|gb|EFU18860.1| translation initiation factor IF-3 [Enterococcus faecalis TX1346] gi|315574173|gb|EFU86364.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309B] gi|315577304|gb|EFU89495.1| translation initiation factor IF-3 [Enterococcus faecalis TX0630] gi|315581684|gb|EFU93875.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309A] gi|323480094|gb|ADX79533.1| translation initiation factor IF-3 [Enterococcus faecalis 62] gi|327534494|gb|AEA93328.1| translation initiation factor IF3 [Enterococcus faecalis OG1RF] gi|329577910|gb|EGG59331.1| translation initiation factor IF-3 [Enterococcus faecalis TX1467] Length = 173 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|307294660|ref|ZP_07574502.1| translation initiation factor IF-3 [Sphingobium chlorophenolicum L-1] gi|306879134|gb|EFN10352.1| translation initiation factor IF-3 [Sphingobium chlorophenolicum L-1] Length = 177 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ +KE+KMRP I Sbjct: 44 MERAYELGLDLVEVSPTADPPVCKFLDIGKYKYEAQKKANIARKTQKTQELKEIKMRPNI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K + F+ DG KVKI+++FRGRE+ HQ LG +LL + E GEI++++ P Sbjct: 104 DDHDYDTKMKKVHDFIGDGDKVKITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYP 163 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 164 RMEGRQMLMVLAPK 177 >gi|320159658|ref|YP_004172882.1| translation initiation factor IF-3 [Anaerolinea thermophila UNI-1] gi|319993511|dbj|BAJ62282.1| translation initiation factor IF-3 [Anaerolinea thermophila UNI-1] Length = 215 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLVE+ TP VC+++D K Y K EA+K Q +KE+++RP Sbjct: 53 LRIARDAELDLVEVAPGATPPVCRVMDFGKFLYERAKKEREAKKAQTRIEVKEIRLRPKT 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + H K + +L +G KVK++V+FRGREI + +L E L I E +I+ I+ P Sbjct: 113 NEHHRGFKTRDARRWLLEGNKVKVTVRFRGREITYPELALEDLREIAEELSDIATIEQAP 172 Query: 121 KFEGRQMIMILSS 133 EG+ M M+LS Sbjct: 173 VLEGKVMTMVLSP 185 >gi|284033334|ref|YP_003383265.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836] gi|283812627|gb|ADB34466.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836] Length = 240 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ ++ P VCK++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 46 LRLAQEADLDLVEVAATARPPVCKLMDFGKYKYETAQKARESRRNQTNTVIKEMKLRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FLR G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 106 DPHDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGFRLLQRLAEDVSELGFVESSP 165 Query: 121 KFEGRQMIMILSS 133 + +GR MIM+L Sbjct: 166 RQDGRNMIMVLGP 178 >gi|258404182|ref|YP_003196924.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM 5692] gi|257796409|gb|ACV67346.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM 5692] Length = 173 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 83/132 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA+E LDLVE+ P VCK++D K +Y +K EA+KKQ +KEVK RP D Sbjct: 38 QMAEEQGLDLVEVSPKARPPVCKVMDYGKYQYEQKKRTQEAKKKQTQVQLKEVKFRPKTD 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD Q K++ I FL G + K+++ FRGREI+H+D G+E+L ++ E ++++ + + Sbjct: 98 EHDYQTKVRHIQRFLEKGDRCKVTIFFRGREIVHKDRGQEILDRVQRDLAEEAKVEQQAR 157 Query: 122 FEGRQMIMILSS 133 EGR M M L+ Sbjct: 158 VEGRTMSMTLAP 169 >gi|327327991|gb|EGE69760.1| translation initiation factor IF-3 [Propionibacterium acnes HL103PA1] gi|328907935|gb|EGG27695.1| translation initiation factor IF-3 [Propionibacterium sp. P08] Length = 212 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|282854559|ref|ZP_06263894.1| translation initiation factor IF-3 [Propionibacterium acnes J139] gi|289426514|ref|ZP_06428257.1| translation initiation factor IF-3 [Propionibacterium acnes SK187] gi|289427759|ref|ZP_06429470.1| translation initiation factor IF-3 [Propionibacterium acnes J165] gi|295130951|ref|YP_003581614.1| translation initiation factor IF-3 [Propionibacterium acnes SK137] gi|282582141|gb|EFB87523.1| translation initiation factor IF-3 [Propionibacterium acnes J139] gi|289153242|gb|EFD01960.1| translation initiation factor IF-3 [Propionibacterium acnes SK187] gi|289159023|gb|EFD07216.1| translation initiation factor IF-3 [Propionibacterium acnes J165] gi|291376339|gb|ADE00194.1| translation initiation factor IF-3 [Propionibacterium acnes SK137] gi|313763448|gb|EFS34812.1| translation initiation factor IF-3 [Propionibacterium acnes HL013PA1] gi|313773422|gb|EFS39388.1| translation initiation factor IF-3 [Propionibacterium acnes HL074PA1] gi|313793834|gb|EFS41863.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA1] gi|313801224|gb|EFS42482.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA2] gi|313811438|gb|EFS49152.1| translation initiation factor IF-3 [Propionibacterium acnes HL083PA1] gi|313813593|gb|EFS51307.1| translation initiation factor IF-3 [Propionibacterium acnes HL025PA1] gi|313816630|gb|EFS54344.1| translation initiation factor IF-3 [Propionibacterium acnes HL059PA1] gi|313819731|gb|EFS57445.1| translation initiation factor IF-3 [Propionibacterium acnes HL046PA2] gi|313822260|gb|EFS59974.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA1] gi|313823746|gb|EFS61460.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA2] gi|313826068|gb|EFS63782.1| translation initiation factor IF-3 [Propionibacterium acnes HL063PA1] gi|313829641|gb|EFS67355.1| translation initiation factor IF-3 [Propionibacterium acnes HL063PA2] gi|313831177|gb|EFS68891.1| translation initiation factor IF-3 [Propionibacterium acnes HL007PA1] gi|313834838|gb|EFS72552.1| translation initiation factor IF-3 [Propionibacterium acnes HL056PA1] gi|313840045|gb|EFS77759.1| translation initiation factor IF-3 [Propionibacterium acnes HL086PA1] gi|314914607|gb|EFS78438.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA4] gi|314919436|gb|EFS83267.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA1] gi|314920656|gb|EFS84487.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA3] gi|314924556|gb|EFS88387.1| translation initiation factor IF-3 [Propionibacterium acnes HL036PA3] gi|314930426|gb|EFS94257.1| translation initiation factor IF-3 [Propionibacterium acnes HL067PA1] gi|314954519|gb|EFS98925.1| translation initiation factor IF-3 [Propionibacterium acnes HL027PA1] gi|314957360|gb|EFT01463.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA1] gi|314962176|gb|EFT06277.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA2] gi|314963805|gb|EFT07905.1| translation initiation factor IF-3 [Propionibacterium acnes HL082PA1] gi|314966000|gb|EFT10099.1| translation initiation factor IF-3 [Propionibacterium acnes HL082PA2] gi|314968366|gb|EFT12465.1| translation initiation factor IF-3 [Propionibacterium acnes HL037PA1] gi|314974056|gb|EFT18152.1| translation initiation factor IF-3 [Propionibacterium acnes HL053PA1] gi|314976764|gb|EFT20859.1| translation initiation factor IF-3 [Propionibacterium acnes HL045PA1] gi|314978781|gb|EFT22875.1| translation initiation factor IF-3 [Propionibacterium acnes HL072PA2] gi|314981813|gb|EFT25906.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA3] gi|314984486|gb|EFT28578.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA1] gi|314986663|gb|EFT30755.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA2] gi|314990778|gb|EFT34869.1| translation initiation factor IF-3 [Propionibacterium acnes HL005PA3] gi|315079657|gb|EFT51647.1| translation initiation factor IF-3 [Propionibacterium acnes HL053PA2] gi|315081114|gb|EFT53090.1| translation initiation factor IF-3 [Propionibacterium acnes HL078PA1] gi|315083435|gb|EFT55411.1| translation initiation factor IF-3 [Propionibacterium acnes HL027PA2] gi|315087002|gb|EFT58978.1| translation initiation factor IF-3 [Propionibacterium acnes HL002PA3] gi|315089177|gb|EFT61153.1| translation initiation factor IF-3 [Propionibacterium acnes HL072PA1] gi|315090681|gb|EFT62657.1| translation initiation factor IF-3 [Propionibacterium acnes HL110PA4] gi|315094892|gb|EFT66868.1| translation initiation factor IF-3 [Propionibacterium acnes HL060PA1] gi|315095231|gb|EFT67207.1| translation initiation factor IF-3 [Propionibacterium acnes HL038PA1] gi|315099076|gb|EFT71052.1| translation initiation factor IF-3 [Propionibacterium acnes HL059PA2] gi|315100543|gb|EFT72519.1| translation initiation factor IF-3 [Propionibacterium acnes HL046PA1] gi|315104164|gb|EFT76140.1| translation initiation factor IF-3 [Propionibacterium acnes HL050PA2] gi|315106683|gb|EFT78659.1| translation initiation factor IF-3 [Propionibacterium acnes HL030PA1] gi|315108909|gb|EFT80885.1| translation initiation factor IF-3 [Propionibacterium acnes HL030PA2] gi|327329566|gb|EGE71325.1| translation initiation factor IF-3 [Propionibacterium acnes HL096PA3] gi|327329589|gb|EGE71347.1| translation initiation factor IF-3 [Propionibacterium acnes HL096PA2] gi|327333951|gb|EGE75667.1| translation initiation factor IF-3 [Propionibacterium acnes HL097PA1] gi|327444369|gb|EGE91023.1| translation initiation factor IF-3 [Propionibacterium acnes HL043PA2] gi|327444566|gb|EGE91220.1| translation initiation factor IF-3 [Propionibacterium acnes HL043PA1] gi|327446238|gb|EGE92892.1| translation initiation factor IF-3 [Propionibacterium acnes HL013PA2] gi|327452177|gb|EGE98831.1| translation initiation factor IF-3 [Propionibacterium acnes HL092PA1] gi|327452810|gb|EGE99464.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA3] gi|327457887|gb|EGF04542.1| translation initiation factor IF-3 [Propionibacterium acnes HL083PA2] gi|328752000|gb|EGF65616.1| translation initiation factor IF-3 [Propionibacterium acnes HL020PA1] gi|328755368|gb|EGF68984.1| translation initiation factor IF-3 [Propionibacterium acnes HL087PA1] gi|328757789|gb|EGF71405.1| translation initiation factor IF-3 [Propionibacterium acnes HL025PA2] gi|328760152|gb|EGF73729.1| translation initiation factor IF-3 [Propionibacterium acnes HL099PA1] Length = 213 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E +LDLVE+ P V K++D K +Y + A E+R+ Q ++ IKE+K+RP I Sbjct: 20 LQLAREQDLDLVEVAPQARPPVVKLMDYGKFKYEAAQKARESRRNQANSIIKEMKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + + E + ++ P Sbjct: 80 DDHDYETKKGHVLRFLKAGDKVKITIMFRGREQSRPELGVNLLRRLADDLTEYATVESPP 139 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 140 KQEGRNMLMILAP 152 >gi|269925882|ref|YP_003322505.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC BAA-798] gi|269789542|gb|ACZ41683.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC BAA-798] Length = 181 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVE+ + P VC+++D K RY K E+RK QK IKEV+++P I Sbjct: 18 LDLARQKGLDLVEVAPNANPPVCRLMDYGKFRYEQTKKERESRKSQKQIVIKEVRLKPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDLQ K K FL +G KVK++V+FRGRE++H ++G+EL+ + + G+ + I+ +P Sbjct: 78 DVHDLQTKAKQARNFLEEGDKVKVTVQFRGREVVHPEIGQELVQRLMDLIGDAATIEQQP 137 Query: 121 KFEGRQMIMILSSKC 135 K +G+ M +L+ + Sbjct: 138 KLDGKNMTALLAPRK 152 >gi|222147168|ref|YP_002548125.1| translation initiation factor IF-3 [Agrobacterium vitis S4] gi|221734158|gb|ACM35121.1| translation initiation factor IF-3 [Agrobacterium vitis S4] Length = 151 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 18 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+K++ F DG KVK+++KFRGRE+ HQ+LG +LL +KE E+++++ EP Sbjct: 78 DTHDYEVKMKSMSRFFEDGDKVKVTLKFRGREMAHQELGMKLLMQVKEDTVEVAKVEAEP 137 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 138 KLEGRQMMMVLAPK 151 >gi|332525937|ref|ZP_08402078.1| translation initiation factor 3 [Rubrivivax benzoatilyticus JA2] gi|332109488|gb|EGJ10411.1| translation initiation factor 3 [Rubrivivax benzoatilyticus JA2] Length = 156 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 20 LRMAGELDVDLVEIAATADPPVCRLMDYGKFKYQEQKKAAEAKSKQKVIEVKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 D D +K++ + F+ DG K K++++FRGREI HQD+G LL I++ +++ ++ Sbjct: 80 DEGDYAIKMRNLRRFIAEDGDKGKVTLRFRGREITHQDIGMRLLERIRDELADVAVVEHM 139 Query: 120 PKFEGRQMIMILSSK 134 PK EGRQMIM+L+ K Sbjct: 140 PKLEGRQMIMVLAPK 154 >gi|152980044|ref|YP_001353178.1| translation initiation factor IF-3 [Janthinobacterium sp. Marseille] gi|151280121|gb|ABR88531.1| translation initiation factor IF-3 [Janthinobacterium sp. Marseille] Length = 154 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EAN+DLVEI + P V +++D K +Y QK A EA+ KQK +KEVK RP D Sbjct: 19 RLAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKKAHEAKLKQKIILVKEVKFRPGTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL DG K KI+++FRGRE+ HQD+G +L +K+ +++ PK Sbjct: 79 DGDYNIKLRNLIKFLEDGDKTKITLRFRGREMAHQDIGVRMLERLKQDLEPYGQVEQWPK 138 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 139 MEGRQMIMVLSPKK 152 >gi|257092826|ref|YP_003166467.1| translation initiation factor IF-3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045350|gb|ACV34538.1| translation initiation factor IF-3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 183 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVEI P VC+I+D K +Y QK EA+ KQK +KEVK RP Sbjct: 47 LSLAEEAGLDLVEIAPMAQPPVCRIVDFGKFKYQEQKRQHEAKLKQKQVQVKEVKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D Q+KL+ + FL + KVK++++FRGRE+ HQD+G + I+ E++ ++ P Sbjct: 107 DENDYQIKLRNMTRFLEEEDKVKVTLRFRGREMAHQDIGMRQIERIRADLQEMAVVEQMP 166 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 167 KMEGRQMVMVLTP 179 >gi|319780189|ref|YP_004139665.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166077|gb|ADV09615.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 178 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 70/134 (52%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP I Sbjct: 45 LLLAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EP Sbjct: 105 DSHDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+LS + Sbjct: 165 KLEGRQMMMVLSPR 178 >gi|269126373|ref|YP_003299743.1| translation initiation factor IF-3 [Thermomonospora curvata DSM 43183] gi|268311331|gb|ACY97705.1| translation initiation factor IF-3 [Thermomonospora curvata DSM 43183] Length = 177 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ + P V K++D K +Y A EAR+ Q T IKE+K+RP I Sbjct: 23 LELAREADLDLVEVAPTARPPVAKLMDYGKFKYESAMKAREARRNQAHTVIKEIKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL + + ++ ++ P Sbjct: 83 DPHDYETKKGHVVRFLKGGDKVKVTIMFRGREQSRPELGFRLLQRLADDVADLGFVESRP 142 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 143 KQDGRNMIMVIGP 155 >gi|91776354|ref|YP_546110.1| translation initiation factor 3 [Methylobacillus flagellatus KT] gi|91710341|gb|ABE50269.1| bacterial translation initiation factor 3 (bIF-3) [Methylobacillus flagellatus KT] Length = 153 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 60/130 (46%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA+ DLVEI +P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 18 AEEADTDLVEIAPQASPPVCRLMDYGKYKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 77 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+ + FL++G K K++++FRGREI HQ++G LL ++ E + ++ PK E Sbjct: 78 DYQVKLRNLIRFLQEGDKAKVTLRFRGREITHQEIGLALLRRVEADLAEYAVVEQFPKME 137 Query: 124 GRQMIMILSS 133 GRQM+M+LS Sbjct: 138 GRQMVMVLSP 147 >gi|82701622|ref|YP_411188.1| translation initiation factor IF-3 [Nitrosospira multiformis ATCC 25196] gi|82409687|gb|ABB73796.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosospira multiformis ATCC 25196] Length = 184 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A+EA +DLVEI + P VC+++D K RY K EA+ KQK IKEVK RP D Sbjct: 21 NLAEEAEVDLVEIAPTAKPPVCRLMDYGKFRYQESKKKHEAKLKQKQIQIKEVKFRPNTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL +G K KI+++FRGRE+ HQ+ G LL IK + ++ PK Sbjct: 81 EGDYNIKLRNLISFLDEGDKAKITLRFRGREMAHQEFGVRLLERIKGDLESHAIVEQFPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+LS + Sbjct: 141 MEGRQMVMVLSPRK 154 >gi|323356733|ref|YP_004223129.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum StLB037] gi|323273104|dbj|BAJ73249.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum StLB037] Length = 236 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ S P V KI+D K +Y + A E R+ Q +T +KEV+ R I Sbjct: 62 LRLAQEADLDLVEVAPSSKPPVVKIMDYGKFKYEAAQKAKETRRNQANTVLKEVRFRLKI 121 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK +GFL+ G KVK + FRGRE + G LL E E ++ P Sbjct: 122 EAHDYITKLKRAEGFLQAGDKVKAMILFRGREQSRPEQGVRLLRKFAEDVAEFGTVESNP 181 Query: 121 KFEGRQMIMILSS 133 +GR M+M+++ Sbjct: 182 TIDGRNMVMVVAP 194 >gi|319949970|ref|ZP_08023959.1| translation initiation factor IF-3 [Dietzia cinnamea P4] gi|319436366|gb|EFV91497.1| translation initiation factor IF-3 [Dietzia cinnamea P4] Length = 163 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ + P VCKI+D K +Y + E+RK Q+ T +KE K+RP I Sbjct: 10 LRLALEADLDLVEVAPNARPPVCKIMDYGKFKYEAAQKERESRKNQQQTVVKEQKLRPKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + + E ++ Sbjct: 70 DTHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLQRLADDITEYGYVETSA 129 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 130 KQDGRNMTMVVAP 142 >gi|318061737|ref|ZP_07980458.1| translation initiation factor IF-3 [Streptomyces sp. SA3_actG] gi|318080746|ref|ZP_07988078.1| translation initiation factor IF-3 [Streptomyces sp. SA3_actF] Length = 191 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 10 LELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LGR LL + + ++ I+ P Sbjct: 70 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGRRLLQRLADDVQDLGFIESSP 129 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 130 KQDGRNMIMVLGP 142 >gi|293556929|ref|ZP_06675490.1| translation initiation factor IF-3 [Enterococcus faecium E1039] gi|291601013|gb|EFF31304.1| translation initiation factor IF-3 [Enterococcus faecium E1039] Length = 174 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|227550907|ref|ZP_03980956.1| translation initiation factor IF3 [Enterococcus faecium TX1330] gi|257878889|ref|ZP_05658542.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933] gi|257881525|ref|ZP_05661178.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502] gi|257885797|ref|ZP_05665450.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501] gi|257887844|ref|ZP_05667497.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733] gi|257890747|ref|ZP_05670400.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410] gi|257893358|ref|ZP_05673011.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408] gi|257896538|ref|ZP_05676191.1| translation initiation factor IF-3 [Enterococcus faecium Com12] gi|257899519|ref|ZP_05679172.1| translation initiation factor IF-3 [Enterococcus faecium Com15] gi|260558448|ref|ZP_05830644.1| initiation factor 3 [Enterococcus faecium C68] gi|261207170|ref|ZP_05921859.1| initiation factor 3 [Enterococcus faecium TC 6] gi|289565291|ref|ZP_06445742.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF] gi|293379318|ref|ZP_06625464.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1] gi|293560311|ref|ZP_06676808.1| translation initiation factor IF-3 [Enterococcus faecium E1162] gi|293567756|ref|ZP_06679097.1| translation initiation factor IF-3 [Enterococcus faecium E1071] gi|293572984|ref|ZP_06683926.1| translation initiation factor IF-3 [Enterococcus faecium E980] gi|294615068|ref|ZP_06694954.1| translation initiation factor IF-3 [Enterococcus faecium E1636] gi|294617094|ref|ZP_06696761.1| translation initiation factor IF-3 [Enterococcus faecium E1679] gi|294620924|ref|ZP_06700125.1| translation initiation factor IF-3 [Enterococcus faecium U0317] gi|314938983|ref|ZP_07846248.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04] gi|314943466|ref|ZP_07850233.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C] gi|314948241|ref|ZP_07851635.1| translation initiation factor IF-3 [Enterococcus faecium TX0082] gi|314951601|ref|ZP_07854647.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A] gi|314991536|ref|ZP_07857012.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B] gi|314994869|ref|ZP_07859996.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01] gi|227180005|gb|EEI60977.1| translation initiation factor IF3 [Enterococcus faecium TX1330] gi|257813117|gb|EEV41875.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933] gi|257817183|gb|EEV44511.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502] gi|257821653|gb|EEV48783.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501] gi|257823898|gb|EEV50830.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733] gi|257827107|gb|EEV53733.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410] gi|257829737|gb|EEV56344.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408] gi|257833103|gb|EEV59524.1| translation initiation factor IF-3 [Enterococcus faecium Com12] gi|257837431|gb|EEV62505.1| translation initiation factor IF-3 [Enterococcus faecium Com15] gi|260075622|gb|EEW63928.1| initiation factor 3 [Enterococcus faecium C68] gi|260078798|gb|EEW66500.1| initiation factor 3 [Enterococcus faecium TC 6] gi|289162947|gb|EFD10796.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF] gi|291589341|gb|EFF21148.1| translation initiation factor IF-3 [Enterococcus faecium E1071] gi|291592010|gb|EFF23633.1| translation initiation factor IF-3 [Enterococcus faecium E1636] gi|291596652|gb|EFF27878.1| translation initiation factor IF-3 [Enterococcus faecium E1679] gi|291599535|gb|EFF30551.1| translation initiation factor IF-3 [Enterococcus faecium U0317] gi|291605761|gb|EFF35198.1| translation initiation factor IF-3 [Enterococcus faecium E1162] gi|291606886|gb|EFF36266.1| translation initiation factor IF-3 [Enterococcus faecium E980] gi|292642114|gb|EFF60278.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1] gi|313590851|gb|EFR69696.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01] gi|313593820|gb|EFR72665.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B] gi|313596295|gb|EFR75140.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A] gi|313597838|gb|EFR76683.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C] gi|313641692|gb|EFS06272.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04] gi|313645374|gb|EFS09954.1| translation initiation factor IF-3 [Enterococcus faecium TX0082] Length = 174 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLDLV + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+++L+ + E +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|54023882|ref|YP_118124.1| putative translation initiation factor IF-3 [Nocardia farcinica IFM 10152] gi|54015390|dbj|BAD56760.1| putative translation initiation factor IF-3 [Nocardia farcinica IFM 10152] Length = 178 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P VCKI+D K +Y + A E+RK Q+ T IKE K+RP I Sbjct: 7 LRVAMEADLDLVEVAPDARPPVCKIMDYGKFKYETAQKARESRKNQQQTVIKEQKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+++ FRGRE +LG LL + ++ ++ Sbjct: 67 DDHDYETKKGHVMRFLEAGSKVKVTIMFRGREQSRPELGYRLLQRLAGDVADLGFVETSA 126 Query: 121 KFEGRQMIMILSS 133 K +GR M M+L+ Sbjct: 127 KQDGRNMTMVLAP 139 >gi|300858362|ref|YP_003783345.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis FRC41] gi|300685816|gb|ADK28738.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis FRC41] gi|302206077|gb|ADL10419.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis C231] gi|302330630|gb|ADL20824.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis 1002] gi|308276315|gb|ADO26214.1| translation initiation factor IF-3 [Corynebacterium pseudotuberculosis I19] Length = 148 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + + ++ +PK Sbjct: 71 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVADFGIVETKPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 131 QDGRNMTMVFGP 142 >gi|49473727|ref|YP_031769.1| translation initiation factor IF-3 [Bartonella quintana str. Toulouse] gi|61213108|sp|Q6G1I3|IF3_BARQU RecName: Full=Translation initiation factor IF-3 gi|49239230|emb|CAF25550.1| Translation initiation factor IF-3 [Bartonella quintana str. Toulouse] Length = 172 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 39 LAMAAEVGLDLVEIVPNTEPPVCKIIDLGKLKYQTQKKAAEIRKKQKVIEIKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYEVKLKAIHRFIGNGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIEAEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+++ K Sbjct: 159 KLEGRQMMMVIAPK 172 >gi|306818550|ref|ZP_07452273.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239] gi|304648723|gb|EFM46025.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239] Length = 362 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ I Sbjct: 49 LILAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P Sbjct: 109 DQHDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTP 168 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 169 RQDGRNMTMVLAP 181 >gi|209883596|ref|YP_002287453.1| translation initiation factor IF-3 [Oligotropha carboxidovorans OM5] gi|209871792|gb|ACI91588.1| translation initiation factor IF-3 [Oligotropha carboxidovorans OM5] Length = 200 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 95/131 (72%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A + +DLVEI + +P VCKI+D K ++ QK A EARKKQK IKE+K+RP+ID H Sbjct: 70 AADLGMDLVEISPNNSPPVCKIMDYGKYKFQAQKKAAEARKKQKIVEIKEIKLRPMIDDH 129 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D VK++A+ F +G KVKI++++RGRE+ HQDLG +LL +K ++++++ + KFE Sbjct: 130 DYDVKMRAMLRFFEEGDKVKITLRYRGREMAHQDLGTKLLEKVKAAVADVAKVEQDAKFE 189 Query: 124 GRQMIMILSSK 134 GRQ++M+L+ + Sbjct: 190 GRQVVMVLAPR 200 >gi|312195567|ref|YP_004015628.1| translation initiation factor IF-3 [Frankia sp. EuI1c] gi|311226903|gb|ADP79758.1| translation initiation factor IF-3 [Frankia sp. EuI1c] Length = 182 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 35 MRLAQEADLDLVEVAPTARPPVCKLMDFGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + E+ ++ +P Sbjct: 95 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVAELGYVEAQP 154 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 155 KQDGRNMTMVMAP 167 >gi|282850467|ref|ZP_06259846.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745] gi|282579960|gb|EFB85364.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745] Length = 174 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 41 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 101 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 160 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 161 KLEGRNMTMILVSK 174 >gi|257867128|ref|ZP_05646781.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC30] gi|257873462|ref|ZP_05653115.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC10] gi|257877206|ref|ZP_05656859.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC20] gi|325568471|ref|ZP_08144838.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC 12755] gi|257801184|gb|EEV30114.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC30] gi|257807626|gb|EEV36448.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC10] gi|257811372|gb|EEV40192.1| translation initiation factor IF-3 [Enterococcus casseliflavus EC20] gi|325158240|gb|EGC70393.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC 12755] Length = 173 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLD+V + + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 LQIAERANLDVVLVAPNAKPPVARIMDYGKFRFEQQKKDREARKKQKVINIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +++ ++ +P Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADLATVEQKP 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPK 170 >gi|255066458|ref|ZP_05318313.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256] gi|288576251|ref|ZP_05978465.2| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996] gi|255049338|gb|EET44802.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256] gi|288565906|gb|EFC87466.1| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996] Length = 134 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|53719557|ref|YP_108543.1| translation initiation factor IF-3 [Burkholderia pseudomallei K96243] gi|52209971|emb|CAH35943.1| translation initiation factor IF-3 [Burkholderia pseudomallei K96243] Length = 178 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 43 RKSEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 102 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 103 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPK 162 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 163 MEGRQMIMVLSPKK 176 >gi|115379014|ref|ZP_01466144.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|115363988|gb|EAU63093.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 185 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI +P VCK++D K +Y +K A E+++ Q +KEVK+RP Sbjct: 7 LERARTEGLDLVEISPMASPPVCKLMDYGKFKYEEKKKAAESKRAQVVIQLKEVKLRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+ ++FRGREI H++ G +L+++ + ++ ++ P Sbjct: 67 EEHDYEFKVRNMRRFLEEGNKAKVVIQFRGREITHREQGTVILNDVAQDLKDVGVVEQPP 126 Query: 121 KFEGRQMIMILSS 133 + EGR M MIL+ Sbjct: 127 RMEGRLMFMILAP 139 >gi|319404957|emb|CBI78559.1| translation initiation factor IF-3 [Bartonella sp. AR 15-3] Length = 164 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 103/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA +A LDLVEI + P VCKI+DL KL+Y QK A E RKKQK+ IKE+KMRP + Sbjct: 31 LSMAADAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKTIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|161869663|ref|YP_001598830.1| translation initiation factor IF-3 [Neisseria meningitidis 053442] gi|239998485|ref|ZP_04718409.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02] gi|240013610|ref|ZP_04720523.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI18] gi|240016049|ref|ZP_04722589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA6140] gi|240080191|ref|ZP_04724734.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19] gi|240112404|ref|ZP_04726894.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11] gi|240115144|ref|ZP_04729206.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18] gi|240117428|ref|ZP_04731490.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1] gi|240120680|ref|ZP_04733642.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID24-1] gi|240122984|ref|ZP_04735940.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332] gi|240125236|ref|ZP_04738122.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-92-679] gi|240127690|ref|ZP_04740351.1| translation initiation factor IF-3 [Neisseria gonorrhoeae SK-93-1035] gi|260441038|ref|ZP_05794854.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2] gi|161595216|gb|ABX72876.1| translation initiation factor IF-3 [Neisseria meningitidis 053442] Length = 136 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP Sbjct: 1 MAMAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P Sbjct: 61 DEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFP 120 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 121 KMEGRQMVMMIAPKK 135 >gi|89101226|ref|ZP_01174052.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911] gi|89084055|gb|EAR63230.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911] Length = 146 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLD+V + + P V +I+D K ++ QK EARK QK IKEV++ P I Sbjct: 10 LEIATRVNLDVVLVAPNAKPPVARIMDYGKFKFEQQKKEKEARKNQKIINIKEVRLSPTI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ P Sbjct: 70 DEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLVRFAEACKEVAAVESHP 129 Query: 121 KFEGRQMIMILSSK 134 K +GR M M+L+ K Sbjct: 130 KMDGRSMFMVLAPK 143 >gi|283851378|ref|ZP_06368660.1| translation initiation factor IF-3 [Desulfovibrio sp. FW1012B] gi|283573328|gb|EFC21306.1| translation initiation factor IF-3 [Desulfovibrio sp. FW1012B] Length = 140 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 85/131 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQE LDLVE+ + P VC+I+D + +Y QK EARKK + +KE+K+RP D Sbjct: 1 MAQEKGLDLVEVAPNAEPPVCRIMDFGRFKYQQQKKLQEARKKSTTVLLKEIKVRPKTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK I FL +G + K++V FRGREI+H+D G +L + GE ++++ EP+ Sbjct: 61 HDYQTKLKHIRRFLEEGDRCKVTVFFRGREIVHKDRGLIILHRVVADLGETAKVEQEPRT 120 Query: 123 EGRQMIMILSS 133 EGR M M+L+ Sbjct: 121 EGRMMTMLLAP 131 >gi|300703879|ref|YP_003745481.1| translation initiation factor if-3 [Ralstonia solanacearum CFBP2957] gi|299071542|emb|CBJ42866.1| Translation initiation factor IF-3 [Ralstonia solanacearum CFBP2957] Length = 178 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E ++DLVEI + P VC+++D K +Y QK A EA+ KQK +KEVK RP Sbjct: 42 LRLAEEKDVDLVEIAPTAQPPVCRLMDYGKFKYQEQKKAHEAKLKQKVIQVKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G + KI+++FRGRE+ HQ++G +L +K E ++++ P Sbjct: 102 DDGDYEVKLRNLKRFLDEGDRAKITLRFRGREMAHQEIGARMLERLKVDLEEHAQVEQMP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L K Sbjct: 162 KMEGRQMVMMLMPKK 176 >gi|90961471|ref|YP_535387.1| translation initiation factor IF-3 [Lactobacillus salivarius UCC118] gi|90820665|gb|ABD99304.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Lactobacillus salivarius UCC118] Length = 174 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ANLDLV + P V KI+D K R+ +QK EARKKQK IKEV++ P I Sbjct: 38 LKMAEDANLDLVLVAPKAKPPVAKIMDYGKYRFELQKKQREARKKQKVVNIKEVRLSPTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K FL G KVK+S++F+GR I H+D+GR++L+ E +++ ++ + Sbjct: 98 DTNDFNTKMKNARKFLSKGDKVKVSIRFKGRAITHKDIGRDVLNRFAEATEDVATVESKA 157 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 158 KMDGRSMFLMLAPKT 172 >gi|225022607|ref|ZP_03711799.1| hypothetical protein CORMATOL_02649 [Corynebacterium matruchotii ATCC 33806] gi|305682038|ref|ZP_07404842.1| translation initiation factor IF-3 [Corynebacterium matruchotii ATCC 14266] gi|224944515|gb|EEG25724.1| hypothetical protein CORMATOL_02649 [Corynebacterium matruchotii ATCC 33806] gi|305658511|gb|EFM48014.1| translation initiation factor IF-3 [Corynebacterium matruchotii ATCC 14266] Length = 145 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 8 KLAYDADLDLVEVAPNAKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E + ++ +PK Sbjct: 68 DHDYETKKSNVIRFLEKGSKVKVTIMFRGREQSRPELGTRLLDRLAEDVADYGIVESKPK 127 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 128 QDGRNMTMVFGP 139 >gi|294792090|ref|ZP_06757238.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27] gi|294457320|gb|EFG25682.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27] Length = 172 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ + E + I+ Sbjct: 99 EDHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFADELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|238018997|ref|ZP_04599423.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748] gi|313893048|ref|ZP_07826625.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158 str. F0412] gi|237864481|gb|EEP65771.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748] gi|313442401|gb|EFR60816.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158 str. F0412] Length = 172 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEKHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 99 EDHDFYVKMKNASKFLGEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|328957060|ref|YP_004374446.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4] gi|328673384|gb|AEB29430.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4] Length = 173 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLV + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 37 LKLAEEANLDLVLVAPKAKPPVARIMDYGKFRFEQQKKEREARKNQKVISIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+ +G+E+L + + +IS I+ Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKSIGKEVLDRLAKETADISTIESAA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M +IL+ K Sbjct: 157 KMDGRSMFLILAPK 170 >gi|269978175|ref|ZP_06185125.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1] gi|307700704|ref|ZP_07637729.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16] gi|269933684|gb|EEZ90268.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1] gi|307613699|gb|EFN92943.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16] Length = 362 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ I Sbjct: 49 LILAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P Sbjct: 109 DQHDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTP 168 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 169 RQDGRNMTMVLAP 181 >gi|291614197|ref|YP_003524354.1| translation initiation factor IF-3 [Sideroxydans lithotrophicus ES-1] gi|291584309|gb|ADE11967.1| translation initiation factor IF-3 [Sideroxydans lithotrophicus ES-1] Length = 172 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI P VC+I+D+ K +Y K EA+ KQK IKE+K RP Sbjct: 37 LRMADEAELDLVEIAPLAEPPVCRIMDIGKFKYAEAKKQHEAKLKQKQVQIKEIKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL DG K KI+++FRGRE+ HQ++G +L+ IK E ++ P Sbjct: 97 DEGDYNIKLRNLIKFLGDGDKTKITLRFRGREMAHQEIGMKLIERIKGDLDEYGVVEQFP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L K Sbjct: 157 KMEGRQMVMVLGPKK 171 >gi|227875288|ref|ZP_03993430.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243] gi|227844193|gb|EEJ54360.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243] Length = 356 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ A LDLVE+ P VCK++D K +Y + A +A++ Q ST +KE+++ I Sbjct: 43 LILAQNAGLDLVEVAPEAHPPVCKLMDFGKYKYEAAQKARDAKRNQASTQLKEIRLGLKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL + FL G KVK+ ++FRGRE ++G +L++ + E E ++ P Sbjct: 103 DQHDYEVKLGHMRRFLDGGDKVKVMIRFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTP 162 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L+ Sbjct: 163 RQDGRNMTMVLAP 175 >gi|255311674|ref|ZP_05354244.1| translation initiation factor IF-3 [Chlamydia trachomatis 6276] gi|255317975|ref|ZP_05359221.1| translation initiation factor IF-3 [Chlamydia trachomatis 6276s] gi|296436389|gb|ADH18563.1| translation initiation factor IF-3 [Chlamydia trachomatis G/9768] gi|296438248|gb|ADH20409.1| translation initiation factor IF-3 [Chlamydia trachomatis G/11074] gi|297140749|gb|ADH97507.1| translation initiation factor IF-3 [Chlamydia trachomatis G/9301] Length = 258 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 118 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 177 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 178 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 237 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 238 KLNGRSLICVIAPGTL 253 >gi|77919020|ref|YP_356835.1| translation initiation factor IF-3 [Pelobacter carbinolicus DSM 2380] gi|77545103|gb|ABA88665.1| bacterial translation initiation factor 3 (bIF-3) [Pelobacter carbinolicus DSM 2380] Length = 146 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVE+ + P VC+I+D K +Y K EA+KK IKEVKMRP Sbjct: 11 LRAAEERGLDLVEVSPNANPPVCRIMDYGKYKYQASKRLAEAKKKSARVDIKEVKMRPKT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVKL+ FL G KVK++V FRGRE+ H + G +L+ + E G+ +++ P Sbjct: 71 EEHDFQVKLRNAMRFLEAGNKVKVTVMFRGREVTHPEFGFDLMKRVAEEVGDAGQVEMSP 130 Query: 121 KFEGRQMIMILSSKC 135 + GR M M+++ K Sbjct: 131 RMAGRFMTMVIAPKK 145 >gi|22299163|ref|NP_682410.1| translation initiation factor IF-3 [Thermosynechococcus elongatus BP-1] gi|29427442|sp|Q8DIG8|IF3_THEEB RecName: Full=Translation initiation factor IF-3 gi|22295345|dbj|BAC09172.1| translation initiation factor IF-3 [Thermosynechococcus elongatus BP-1] Length = 182 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + P VCKI+D K R+ +K A EARKKQ ++ +KEVKMR I Sbjct: 48 IAIAREKELDLVLVSDKADPPVCKIIDYGKFRFEQEKKAREARKKQHTSDVKEVKMRYKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V + + FL+ G KVK +V FRGREI H L ELL+ + ++ + P Sbjct: 108 EEHDYNVCINRAERFLKAGDKVKATVTFRGREIQHSHLAEELLNRMANDLQAVAEVQQAP 167 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM L+ K Sbjct: 168 KQEGRNMIMFLAPK 181 >gi|19552595|ref|NP_600597.1| translation initiation factor IF-3 [Corynebacterium glutamicum ATCC 13032] gi|62390263|ref|YP_225665.1| translation initiation factor IF-3 [Corynebacterium glutamicum ATCC 13032] gi|23821719|sp|Q8NQP8|IF3_CORGL RecName: Full=Translation initiation factor IF-3 gi|21324146|dbj|BAB98771.1| Translation initiation factor IF3 [Corynebacterium glutamicum ATCC 13032] gi|41325600|emb|CAF21389.1| TRANSLATION INITIATION FACTOR IF3 PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 189 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K+RP ID Sbjct: 52 KLAFDADLDLVEVAPNAKPPVCKIMDYGKFKYEAAQKARESRKNQQQTVVKEQKLRPKID 111 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + ++ K Sbjct: 112 DHDYETKKNNVIRFLEKGSKVKVTIMFRGREQARPELGYRLLERLANDVVDFGIVETRAK 171 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 172 QDGRNMTMVLGP 183 >gi|319403531|emb|CBI77112.1| translation initiation factor IF-3 [Bartonella rochalimae ATCC BAA-1498] Length = 164 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 78/134 (58%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 31 LSMAAEAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|20532093|sp|Q92ST3|IF3_RHIME RecName: Full=Translation initiation factor IF-3 Length = 177 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 44 LRMADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EP Sbjct: 104 DTHDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEP 163 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 164 KLEGRQMMMVLAPK 177 >gi|238063946|ref|ZP_04608655.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149] gi|237885757|gb|EEP74585.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149] Length = 216 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEITELGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|119490629|ref|ZP_01623034.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] gi|119453794|gb|EAW34951.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] Length = 178 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR ID Sbjct: 44 RLAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKRAREAKKKQHNADVKEVKMRYKID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD QV+++ + FL+ G KVK ++ FRGREI H +L +ELL+ + GE++ + PK Sbjct: 104 DHDYQVRVRQAERFLKSGDKVKATIMFRGREIQHSNLAKELLNRMATDLGELAEVQQYPK 163 Query: 122 FEGRQMIMILSSKC 135 EGR M+M+LS K Sbjct: 164 QEGRTMMMLLSPKK 177 >gi|262091799|gb|ACY25387.1| bacterial translation initiation factor 3 [uncultured actinobacterium] Length = 177 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E LDLVEI P VCKI+D K +Y + + A EAR+ Q +KEV+M P I Sbjct: 18 LKMADEVGLDLVEIAPDANPPVCKIMDFGKYKYEVAQKAREARQNQTHIVVKEVRMTPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K ++ FL+ G KVK+++KFRGRE +LG ++L + E E+ ++ P Sbjct: 78 ENHDYETKRSQVEKFLKGGDKVKVTMKFRGREQTRPELGYKMLQRLAEDIAEVGFVEFAP 137 Query: 121 KFEGRQMIMILSS 133 K EGR M M+L Sbjct: 138 KQEGRNMTMVLGP 150 >gi|311742378|ref|ZP_07716187.1| translation initiation factor IF3 [Aeromicrobium marinum DSM 15272] gi|311314006|gb|EFQ83914.1| translation initiation factor IF3 [Aeromicrobium marinum DSM 15272] Length = 225 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ + P VC+++D K +Y + A E+R+ Q +T IKE+K+RP I Sbjct: 31 LRLAAESDLDLVEVAPTARPPVCRLMDYGKFKYEAAQKARESRRNQTNTVIKEMKLRPKI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + ++ I+ P Sbjct: 91 DQHDYDTKKGHVVRFLKAGDKVKITIMFRGREQHRPELGFRLLQRLAADVEDLGFIESHP 150 Query: 121 KFEGRQMIMILSS 133 + +GR M M+L Sbjct: 151 RQDGRNMTMVLGP 163 >gi|319406445|emb|CBI80085.1| translation initiation factor IF-3 [Bartonella sp. 1-1C] Length = 164 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA +A LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 31 LSMAADAGLDLVEIVPNAEPPVCKIIDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DIHDYEVKLKAIRRFIDNGDKVKITLRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|294793960|ref|ZP_06759097.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44] gi|294455530|gb|EFG23902.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44] Length = 172 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVEI + P V +I++ K RY QK EA+KKQK +KEVK+RP I Sbjct: 39 LALAEEQHLDLVEIAPNAKPPVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL +G KVK+++ FRGRE+ H +LG +L+ E E + I+ Sbjct: 99 ENHDFYVKMKNASKFLAEGNKVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAA 158 Query: 121 KFEGRQMIMILSSK 134 K EGR M MIL SK Sbjct: 159 KLEGRNMTMILVSK 172 >gi|145594425|ref|YP_001158722.1| translation initiation factor IF-3 [Salinispora tropica CNB-440] gi|145303762|gb|ABP54344.1| bacterial translation initiation factor 3 (bIF-3) [Salinispora tropica CNB-440] Length = 204 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPMARPPVCKLMDFGKFKYESALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVK+++ FRGRE +LG LL ++ E+ ++ P Sbjct: 89 DPHDYETKKGHVVRFLKAGDKVKVTIMFRGREQSRPELGYRLLRRLESEISELGYVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|74317026|ref|YP_314766.1| translation initiation factor 3 [Thiobacillus denitrificans ATCC 25259] gi|74056521|gb|AAZ96961.1| initiation factor 3 [Thiobacillus denitrificans ATCC 25259] Length = 155 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA+LDLVEI + P V KI+D K +Y K EA+ KQK IKE+K RP Sbjct: 20 LRQAEEADLDLVEIAPTAQPPVAKIMDYGKFKYQESKKQHEAKLKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G K KI+++FRGRE+ HQ++G L + E++ ++ P Sbjct: 80 DEGDYQIKLRNLIKFLEEGDKTKITLRFRGREMAHQEIGMAQLRRVSTDLAELAVVEQFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+L+ K Sbjct: 140 KMEGRQLVMMLAPKK 154 >gi|110834702|ref|YP_693561.1| translation initiation factor IF-3 [Alcanivorax borkumensis SK2] gi|110647813|emb|CAL17289.1| Translation initiation factor IF-3 [Alcanivorax borkumensis SK2] Length = 186 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI P VC+I+D K + ++ A E RKKQ+ T +KE+K RP Sbjct: 47 LEKATSKQLDLVEISPGAEPPVCRIMDYGKHLFEAKQKAKEGRKKQRQTQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+ + FL G K KI+V+FRGRE+ HQ+LGRELL+ I++ E ++ P Sbjct: 107 DIGDYDVKLRNLIRFLEAGDKAKITVRFRGREMAHQELGRELLARIEKDLEEYGSVEQRP 166 Query: 121 KFEGRQMIMILSS 133 EGRQMIM+L Sbjct: 167 NMEGRQMIMVLGP 179 >gi|209551835|ref|YP_002283752.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238054433|sp|B5ZXR7|IF3_RHILW RecName: Full=Translation initiation factor IF-3 gi|209537591|gb|ACI57526.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 178 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI +V P VCKILDL KL+Y QK A EARKKQK +KE+KMRP I Sbjct: 45 LRMAEEAGLDLVEISPNVEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K E ++++ EP Sbjct: 105 DTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEFAKVEAEP 164 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 165 KLEGRQMMMVLAPK 178 >gi|319942328|ref|ZP_08016643.1| translation initiation factor IF-3 [Sutterella wadsworthensis 3_1_45B] gi|319804201|gb|EFW01101.1| translation initiation factor IF-3 [Sutterella wadsworthensis 3_1_45B] Length = 135 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A +DLVE+ + P VC+++D K RY QK A EA+ KQK IKEVK RP D Sbjct: 1 MAEDAGVDLVEVAPNAVPPVCRLMDYGKFRYQEQKKAQEAKAKQKVVQIKEVKFRPATDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q KL+++ FL DG K KI+++FRGRE+ HQ G +L+ ++E +I++++ PK Sbjct: 61 NDFQTKLRSLKRFLEDGDKAKITLRFRGREMAHQQFGTQLMDRVREELVDIAQVEHAPKL 120 Query: 123 EGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 121 EGRQMIMVLAPKK 133 >gi|198284331|ref|YP_002220652.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248852|gb|ACH84445.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 166 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 54/127 (42%), Positives = 83/127 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI P VC+I+D K R+ K +A+++QK T +KE+K RP D D Q+K Sbjct: 39 LDLVEIAPQADPPVCRIMDYGKFRFQESKRQHDAKRRQKQTQVKEIKFRPRTDDADYQIK 98 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ I F+ DG + KI+++FRGRE+ H +LG ELL+ ++ E+ ++ P+ EGRQM+ Sbjct: 99 LRNILRFIEDGDRAKITLRFRGREMSHPELGMELLNRVERDLTEVGVVEQRPRMEGRQMV 158 Query: 129 MILSSKC 135 MI++ + Sbjct: 159 MIVAPRK 165 >gi|49474873|ref|YP_032914.1| translation initiation factor IF-3 [Bartonella henselae str. Houston-1] gi|61213111|sp|Q6G570|IF3_BARHE RecName: Full=Translation initiation factor IF-3 gi|49237678|emb|CAF26865.1| Translation initiation factor IF-3 [Bartonella henselae str. Houston-1] Length = 172 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 39 LAMAAEVGLDLVEIVPNAEPPVCKIIDLGKLKYQTQKKAAETRKKQKVIEIKEIKMRPNV 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLKAI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 99 DVHDYGVKLKAIHRFIGNGDKVKITLRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEP 158 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M++++K Sbjct: 159 KLEGRQMMMVIAAK 172 >gi|291300538|ref|YP_003511816.1| translation initiation factor IF-3 [Stackebrandtia nassauensis DSM 44728] gi|290569758|gb|ADD42723.1| translation initiation factor IF-3 [Stackebrandtia nassauensis DSM 44728] Length = 182 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + +LDLVE+ + P VCK++D K +Y A EAR+ Q+ T IKE+K+RP I Sbjct: 29 LQLAADVDLDLVEVAPNARPPVCKLMDYGKHKYETALKAREARRNQQQTVIKEMKLRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL+ + E ++ ++ P Sbjct: 89 DDHDYETKKGHVIRFLKAGDKVKITIMFRGREQSRPELGLRLLNKLGEEVSDLGVVEAAP 148 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 149 KQDGRNMIMVLAP 161 >gi|296163126|ref|ZP_06845897.1| translation initiation factor IF-3 [Burkholderia sp. Ch1-1] gi|295886628|gb|EFG66475.1| translation initiation factor IF-3 [Burkholderia sp. Ch1-1] Length = 156 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP D Sbjct: 21 RMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKVVQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|254446924|ref|ZP_05060391.1| translation initiation factor IF-3 [gamma proteobacterium HTCC5015] gi|198263063|gb|EDY87341.1| translation initiation factor IF-3 [gamma proteobacterium HTCC5015] Length = 146 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 61/132 (46%), Positives = 84/132 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLVEI + P VC+++D K ++ K A A+K QK +KEVK RP D Sbjct: 11 KIAEEAALDLVEIVPNAKPPVCRVMDYGKYKFEQSKKANNAKKNQKQIKVKEVKFRPGTD 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL + FL G K K++++FRGREI H +LGR+LL I+ E + ++ PK Sbjct: 71 DGDYNVKLNNLKRFLEKGDKAKVTLRFRGREITHHELGRDLLKRIEGDLEEYASVEQFPK 130 Query: 122 FEGRQMIMILSS 133 EGRQMIMIL+ Sbjct: 131 MEGRQMIMILAP 142 >gi|309378778|emb|CBX22604.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 134 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 90/133 (67%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ P+ Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPRM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|312795973|ref|YP_004028895.1| protein translation Initiation Factor 3 (IF-3) [Burkholderia rhizoxinica HKI 454] gi|312167748|emb|CBW74751.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Burkholderia rhizoxinica HKI 454] Length = 156 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RLAEQHDVDLVEIAPHAQPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L +++ E +++ PK Sbjct: 81 DGDYHVKLRNLTRFLDEGDKTKITLRFRGREMAHQEIGMRMLDRLRQDLDEYGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ K Sbjct: 141 MEGRQMVMVLAPKK 154 >gi|317124675|ref|YP_004098787.1| bacterial translation initiation factor 3 (bIF-3) [Intrasporangium calvum DSM 43043] gi|315588763|gb|ADU48060.1| bacterial translation initiation factor 3 (bIF-3) [Intrasporangium calvum DSM 43043] Length = 209 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLVE+ P V K++D K +Y A EARK Q +T IKE+K+RP I Sbjct: 34 LRLAEEANLDLVEVAPMAKPPVAKLMDFGKFKYEAAMKAREARKNQVNTVIKEIKLRPKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK+++ FRGRE +LGR LL + + E+ ++ P Sbjct: 94 DPHDYGTKKGHVERFLKAGDKVKVTIMFRGREQSRPELGRRLLERLADDIAELGYVESAP 153 Query: 121 KFEGRQMIMILSS 133 K +GR MIM++ Sbjct: 154 KQDGRNMIMVIGP 166 >gi|254429698|ref|ZP_05043405.1| translation initiation factor IF-3 [Alcanivorax sp. DG881] gi|196195867|gb|EDX90826.1| translation initiation factor IF-3 [Alcanivorax sp. DG881] Length = 186 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI P VC+I+D K + ++ A E RKKQ+ T +KE+K RP Sbjct: 47 LEKATSQQLDLVEISPGAEPPVCRIMDYGKHLFEAKQKAKEGRKKQRQTQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D +VKL+ + FL G K KI+++FRGRE+ HQ+LGRELL+ +++ E + ++ P Sbjct: 107 DVGDYEVKLRNLIRFLEAGDKTKITIRFRGREMAHQELGRELLARVEKDLEEYAHVEQRP 166 Query: 121 KFEGRQMIMILSS 133 EGRQMIM+L Sbjct: 167 NMEGRQMIMVLGP 179 >gi|91784427|ref|YP_559633.1| translation initiation factor 3 [Burkholderia xenovorans LB400] gi|91688381|gb|ABE31581.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia xenovorans LB400] Length = 156 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP D Sbjct: 21 RMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKIVQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|194098021|ref|YP_002001069.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945] gi|254804602|ref|YP_003082823.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14] gi|269214427|ref|ZP_05986527.2| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970] gi|304387977|ref|ZP_07370149.1| translation initiation factor IF3 [Neisseria meningitidis ATCC 13091] gi|193933311|gb|ACF29135.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945] gi|254668144|emb|CBA04771.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14] gi|254674304|emb|CBA10088.1| translation initiation factor IF-3 [Neisseria meningitidis alpha275] gi|269209845|gb|EEZ76300.1| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970] gi|304337976|gb|EFM04114.1| translation initiation factor IF3 [Neisseria meningitidis ATCC 13091] gi|308388910|gb|ADO31230.1| putative translation initiation factor IF-3 [Neisseria meningitidis alpha710] gi|316983702|gb|EFV62683.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76] gi|317163763|gb|ADV07304.1| translation initiation factor 3 [Neisseria gonorrhoeae TCDC-NG08107] gi|319410090|emb|CBY90426.1| translation initiation factor IF-3 [Neisseria meningitidis WUE 2594] gi|325127773|gb|EGC50681.1| translation initiation factor IF-3 [Neisseria meningitidis N1568] gi|325133765|gb|EGC56421.1| translation initiation factor IF-3 [Neisseria meningitidis M13399] gi|325137876|gb|EGC60451.1| translation initiation factor IF-3 [Neisseria meningitidis ES14902] gi|325197940|gb|ADY93396.1| translation initiation factor IF-3 [Neisseria meningitidis G2136] gi|325200595|gb|ADY96050.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76] gi|325202483|gb|ADY97937.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240149] gi|325203808|gb|ADY99261.1| translation initiation factor IF-3 [Neisseria meningitidis M01-240355] Length = 134 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 62/133 (46%), Positives = 90/133 (67%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEGQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|225076639|ref|ZP_03719838.1| hypothetical protein NEIFLAOT_01689 [Neisseria flavescens NRL30031/H210] gi|224952045|gb|EEG33254.1| hypothetical protein NEIFLAOT_01689 [Neisseria flavescens NRL30031/H210] Length = 134 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|186476315|ref|YP_001857785.1| translation initiation factor IF-3 [Burkholderia phymatum STM815] gi|184192774|gb|ACC70739.1| translation initiation factor IF-3 [Burkholderia phymatum STM815] Length = 156 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +++++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RLSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|209516674|ref|ZP_03265527.1| translation initiation factor IF-3 [Burkholderia sp. H160] gi|295677047|ref|YP_003605571.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1002] gi|307730401|ref|YP_003907625.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1003] gi|323526735|ref|YP_004228888.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1001] gi|209502949|gb|EEA02952.1| translation initiation factor IF-3 [Burkholderia sp. H160] gi|295436890|gb|ADG16060.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1002] gi|307584936|gb|ADN58334.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1003] gi|323383737|gb|ADX55828.1| translation initiation factor IF-3 [Burkholderia sp. CCGE1001] Length = 156 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +M+++ ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|158313564|ref|YP_001506072.1| initiation factor 3 [Frankia sp. EAN1pec] gi|158108969|gb|ABW11166.1| initiation factor 3 [Frankia sp. EAN1pec] Length = 149 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE++LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP I Sbjct: 1 MRLAQESDLDLVEVAPTARPPVCKLMDYGKFKYESDQKRREARKNQVQTVIKEMKLRPKI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LG LL + ++ ++ +P Sbjct: 61 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGIRLLQRLSTDVADLGYVEAQP 120 Query: 121 KFEGRQMIMILSS 133 K +GR M M+++ Sbjct: 121 KQDGRNMTMVMAP 133 >gi|20808119|ref|NP_623290.1| translation initiation factor IF3 [Thermoanaerobacter tengcongensis MB4] gi|22095768|sp|Q8R9C2|IF3_THETN RecName: Full=Translation initiation factor IF-3 gi|20516706|gb|AAM24894.1| Translation initiation factor IF3 [Thermoanaerobacter tengcongensis MB4] Length = 180 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I + P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 46 KIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPNIE 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL+DG KVK++++FRGRE H L +LL E E ++ P Sbjct: 106 DHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLAEDLLKRFAEELREYGNVEKAPS 165 Query: 122 FEGRQMIMILSSKC 135 +GR M+M+++ K Sbjct: 166 MDGRNMMMVIAPKK 179 >gi|316931436|ref|YP_004106418.1| translation initiation factor IF-3 [Rhodopseudomonas palustris DX-1] gi|315599150|gb|ADU41685.1| translation initiation factor IF-3 [Rhodopseudomonas palustris DX-1] Length = 179 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 46 IKMAMDAGMDLVEISPTSSPPVCKIMDYGKYKYSAQKKAAEARKKQKIVEIKEIKLRPMI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + Sbjct: 106 DDHDYDVKMKAMLRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDA 165 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 166 RFEGRQVVMVLAPR 179 >gi|257871007|ref|ZP_05650660.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2] gi|257805171|gb|EEV33993.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2] Length = 173 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLD+V + + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 LQIAERANLDVVLVAPNAKPPVARIMDYGKYRFEQQKKDREARKKQKVINIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +++ ++ +P Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADLASVEQKP 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 157 KMDGRSMFLVLSPK 170 >gi|209523635|ref|ZP_03272189.1| translation initiation factor IF-3 [Arthrospira maxima CS-328] gi|209496040|gb|EDZ96341.1| translation initiation factor IF-3 [Arthrospira maxima CS-328] Length = 180 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQE LDLV + P VC+I+D K +Y +K EARKKQ + +KEVKMR I Sbjct: 43 MKLAQEKELDLVLVSDKADPPVCRIMDYGKFKYEQEKKVREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L RELL + E + + P Sbjct: 103 DDHDYQVRVNQAKRFLKSGDKVKATIMFRGREIQHSNLARELLKRMAVDLEEHAEVQQSP 162 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M+L+ K Sbjct: 163 KQEGRSMMMLLAPKKT 178 >gi|116747873|ref|YP_844560.1| translation initiation factor IF-3 [Syntrophobacter fumaroxidans MPOB] gi|116696937|gb|ABK16125.1| translation initiation factor IF-3 [Syntrophobacter fumaroxidans MPOB] Length = 171 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVE+ + P VCKI+D K +Y K EA+KKQ +KEVK+RP Sbjct: 37 LELAAQDELDLVEVAPNADPPVCKIMDYGKFKYQQNKRTQEAKKKQTVIQVKEVKIRPKT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL VK++ I FL K K+++ FRGREI + D G ++L ++E E + I+ P Sbjct: 97 DEHDLLVKIRHIKRFLAQKDKAKVTILFRGREIAYTDQGTKVLERVREELKEDAVIEQPP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+MIL+ K Sbjct: 157 KMEGRNMVMILAPKA 171 >gi|168061315|ref|XP_001782635.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665868|gb|EDQ52538.1| predicted protein [Physcomitrella patens subsp. patens] Length = 315 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 2/136 (1%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRPVI 60 A++A+LDLV I P VC+I+D K RY QK EA+KK +KE+KMR I Sbjct: 137 RARDADLDLVMIAPDADPPVCRIMDYSKYRYEAQKKKREAQKKAIASRQDLKELKMRYNI 196 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV+L++ FL+DG KVK+ +F+GRE+ +DL +L + GE+ ++ + Sbjct: 197 DTHDYQVRLRSAMKFLKDGDKVKVVCQFKGREMDFKDLAFKLFQKFIDDIGELGVVESKM 256 Query: 121 KFEGRQMIMILSSKCV 136 EGRQMIM+L Sbjct: 257 AIEGRQMIMLLGPNKT 272 >gi|104781107|ref|YP_607605.1| translation initiation factor IF-3 [Pseudomonas entomophila L48] gi|123079218|sp|Q1IC14|IF3_PSEE4 RecName: Full=Translation initiation factor IF-3 gi|95110094|emb|CAK14799.1| protein chain initiation factor IF-3 [Pseudomonas entomophila L48] Length = 183 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAQPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDKAKISLRFRGREMAHQELGMELLKRVETDLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPKK 181 >gi|313139835|ref|ZP_07802028.1| translation initiation factor If-3 [Bifidobacterium bifidum NCIMB 41171] gi|313132345|gb|EFR49962.1| translation initiation factor If-3 [Bifidobacterium bifidum NCIMB 41171] Length = 248 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 58 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 118 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAADVEEYGTVESRP 177 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 178 KQEGRNIIMTLAPK 191 >gi|237785422|ref|YP_002906127.1| translation initiation factor IF-3 [Corynebacterium kroppenstedtii DSM 44385] gi|237758334|gb|ACR17584.1| translation initiation factor IF-3 [Corynebacterium kroppenstedtii DSM 44385] Length = 183 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 76/132 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLVE+ P V KI+D K +Y + A E+R+ Q+ T +KE K RP ID Sbjct: 45 KLAYDADLDLVEVAPRAKPPVAKIMDYGKYKYEQAQKARESRRNQQQTVVKEQKFRPKID 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + + ++ PK Sbjct: 105 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVADAGVVESRPK 164 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 165 QDGRNMTMVLGP 176 >gi|85858498|ref|YP_460700.1| translation initiation factor 3 [Syntrophus aciditrophicus SB] gi|85721589|gb|ABC76532.1| translation initiation factor 3 (IF-3) [Syntrophus aciditrophicus SB] Length = 181 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ S+ TP VC+I+D K RY K ARK Q + +KE+++RP + Sbjct: 47 LAEARKEGLDLVEVASTSTPPVCRIMDYGKFRYQQSKKLQVARKSQSTIQVKEIRLRPKV 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDLQVK+K I FL KVK+SV FRGREI D+GR+LL +IK G+ ID +P Sbjct: 107 EEHDLQVKIKHIRKFLEQHDKVKVSVLFRGREIAFTDIGRKLLEDIKNNLGDSCNIDQQP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 167 KLEGRNMVMVLSPKK 181 >gi|320115602|ref|YP_004185761.1| translation initiation factor IF-3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319928693|gb|ADV79378.1| translation initiation factor IF-3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 183 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 50 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL++G KVK++++FRGRE H L +LL E I+ P Sbjct: 110 DHDFGVKLKSAIKFLKEGNKVKVTIRFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPN 169 Query: 122 FEGRQMIMILSSKC 135 EGR ++M+L+ K Sbjct: 170 IEGRNLMMVLTPKS 183 >gi|255324637|ref|ZP_05365754.1| translation initiation factor IF-3 [Corynebacterium tuberculostearicum SK141] gi|255298543|gb|EET77843.1| translation initiation factor IF-3 [Corynebacterium tuberculostearicum SK141] Length = 156 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 19 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 79 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 138 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 139 QDGRNMTMVLGP 150 >gi|78222624|ref|YP_384371.1| translation initiation factor IF-3 [Geobacter metallireducens GS-15] gi|78193879|gb|ABB31646.1| bacterial translation initiation factor 3 (bIF-3) [Geobacter metallireducens GS-15] Length = 143 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 7 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKLQEAKKKQSHVVVKEVKLRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + F+ +G K K+++ FRGREI H + G L + +I+ I+ +P Sbjct: 67 DEHDLQFKIKHVRRFIEEGNKAKVTLVFRGREITHMEFGVRALERVASEIEDIAVIEMKP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 127 KMEGRSMFMIVAPKV 141 >gi|26989189|ref|NP_744614.1| translation initiation factor IF-3 [Pseudomonas putida KT2440] gi|325276811|ref|ZP_08142512.1| translation initiation factor IF-3 [Pseudomonas sp. TJI-51] gi|24984028|gb|AAN68078.1|AE016439_13 translation initiation factor IF-3 [Pseudomonas putida KT2440] gi|324098049|gb|EGB96194.1| translation initiation factor IF-3 [Pseudomonas sp. TJI-51] Length = 177 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 41 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KMEGRQLMMVIAPKK 175 >gi|225019253|ref|ZP_03708445.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum DSM 5476] gi|224947884|gb|EEG29093.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum DSM 5476] Length = 177 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLV+I TP VC+I++ K ++ K EARK QK +KEV+M I Sbjct: 38 LKLALSKDLDLVKIAPQATPPVCRIMNYGKYKFEQSKREKEARKNQKIVEVKEVRMSLNI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G KVK+SV+FRGRE+ H +LG LL K EI +D Sbjct: 98 DTHDFNTKVNQAIKFLKSGDKVKVSVRFRGREMAHTNLGHGLLDRFKTAVEEIGSVDKPS 157 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M +S+K Sbjct: 158 KMEGRSMVMFISAKPA 173 >gi|114566617|ref|YP_753771.1| hypothetical protein Swol_1090 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337552|gb|ABI68400.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 179 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +AQE LDLVE+ S P VC+++D K R+ K EARKKQ+ IKEVKMRP I Sbjct: 31 MDLAQEKELDLVEVAPSAKPPVCRLMDYGKYRFEQSKREKEARKKQRIISIKEVKMRPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QVK K FL G KVK+++ FRGREI H D+G +L + E+ +IS I+ P Sbjct: 91 EEHDFQVKAKNARKFLSGGDKVKLTIMFRGREITHPDIGEKLSLKLTEQLSDISTIEKMP 150 Query: 121 KFEGRQMIMILSSK 134 K EGR M+ IL K Sbjct: 151 KVEGRNMVTILVPK 164 >gi|90579636|ref|ZP_01235445.1| putative initiation factor IF3 [Vibrio angustum S14] gi|90439210|gb|EAS64392.1| putative initiation factor IF3 [Vibrio angustum S14] Length = 137 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A +A +DLVEI + P VC+++D K + K A E +K QK IKEVK RP Sbjct: 1 MEVALDAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK +I+ + P Sbjct: 61 DEGDYQVKLRNLTRFLEEGNKGKVTLRFRGREMAHQGIGIELLNRIKGELEDIAVCESFP 120 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQM M+L+ K Sbjct: 121 NRVEGRQMTMMLAPKK 136 >gi|330816670|ref|YP_004360375.1| Translation initiation factor IF-3 [Burkholderia gladioli BSR3] gi|327369063|gb|AEA60419.1| Translation initiation factor IF-3 [Burkholderia gladioli BSR3] Length = 156 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 84/134 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E +++ PK Sbjct: 81 DGDYNVKLRNLTRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEFGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|103485760|ref|YP_615321.1| translation initiation factor IF-3 [Sphingopyxis alaskensis RB2256] gi|98975837|gb|ABF51988.1| bacterial translation initiation factor 3 (bIF-3) [Sphingopyxis alaskensis RB2256] Length = 173 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 40 IEQAAEVGLDLVEVSPNADPPVCKFLDVGKYKYEAQKKANLARKSQKTQEIKEIKMRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+K + FL +G KVK++++FRGRE+ H LG +L + E E+++++ P Sbjct: 100 DDHDFDVKMKKVFDFLEEGDKVKMTMRFRGREMSHTQLGLNVLQRVAELTAEVAKVEAHP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 160 RTEGRQMLMVLAPK 173 >gi|227833184|ref|YP_002834891.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] gi|262184170|ref|ZP_06043591.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] gi|227454200|gb|ACP32953.1| translation initiation factor IF-3 [Corynebacterium aurimucosum ATCC 700975] Length = 148 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|291457666|ref|ZP_06597056.1| translation initiation factor IF-3 [Bifidobacterium breve DSM 20213] gi|291380719|gb|EFE88237.1| translation initiation factor IF-3 [Bifidobacterium breve DSM 20213] Length = 266 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 65 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 125 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEFGTVESKP 184 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 185 KQEGRNIIMTLAPK 198 >gi|269213638|ref|ZP_05982444.2| translation initiation factor IF-3 [Neisseria cinerea ATCC 14685] gi|269145721|gb|EEZ72139.1| translation initiation factor IF-3 [Neisseria cinerea ATCC 14685] Length = 134 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLVDGDKVKVTLRFRGREMAHQQLGAQLLERVKEELAEVAQIESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|161524951|ref|YP_001579963.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|189350301|ref|YP_001945929.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|221197734|ref|ZP_03570780.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2M] gi|221204708|ref|ZP_03577725.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2] gi|221214903|ref|ZP_03587871.1| translation initiation factor IF-3 [Burkholderia multivorans CGD1] gi|160342380|gb|ABX15466.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|189334323|dbj|BAG43393.1| translation initiation factor IF-3 [Burkholderia multivorans ATCC 17616] gi|221165130|gb|EED97608.1| translation initiation factor IF-3 [Burkholderia multivorans CGD1] gi|221175565|gb|EEE07995.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2] gi|221181666|gb|EEE14067.1| translation initiation factor IF-3 [Burkholderia multivorans CGD2M] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI +P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|187924731|ref|YP_001896373.1| translation initiation factor IF-3 [Burkholderia phytofirmans PsJN] gi|187715925|gb|ACD17149.1| translation initiation factor IF-3 [Burkholderia phytofirmans PsJN] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK +KEVK RP D Sbjct: 21 RMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKIVQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLIRFLDDGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|56552802|ref|YP_163641.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ZM4] gi|61213066|sp|Q5NL80|IF3_ZYMMO RecName: Full=Translation initiation factor IF-3 gi|56544376|gb|AAV90530.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ZM4] Length = 179 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+K+RP I Sbjct: 46 MEQAQEVGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKTQKTQEIKEIKLRPNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K I FL DG KVK++++FRGRE+ H LG +++ ++ EI++++ P Sbjct: 106 DQHDYDTKMKKIVQFLEDGDKVKVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHP 165 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 166 RMEGRQMLMVVAPK 179 >gi|224367574|ref|YP_002601737.1| InfC [Desulfobacterium autotrophicum HRM2] gi|223690290|gb|ACN13573.1| InfC [Desulfobacterium autotrophicum HRM2] Length = 192 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+E+++DLVE+ + P VCKI+D + +Y + K EARKKQK IKE+K+RP Sbjct: 59 LQKARESHMDLVEVSPNAQPPVCKIMDYGRYKYELTKKHQEARKKQKGFQIKEIKVRPGT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K I F+ + KVK+++ FRGREI R++L + E E ++++ P Sbjct: 119 DSHDLETKVKHIQKFINNRDKVKVTLVFRGREITLSQQARDVLERVAEMTSEFAQVEQFP 178 Query: 121 KFEGRQMIMILSSK 134 KFEGR M M+LS K Sbjct: 179 KFEGRTMTMVLSPK 192 >gi|115351413|ref|YP_773252.1| translation initiation factor IF-3 [Burkholderia ambifaria AMMD] gi|170701131|ref|ZP_02892105.1| translation initiation factor IF-3 [Burkholderia ambifaria IOP40-10] gi|171318443|ref|ZP_02907598.1| translation initiation factor IF-3 [Burkholderia ambifaria MEX-5] gi|172060452|ref|YP_001808104.1| translation initiation factor IF-3 [Burkholderia ambifaria MC40-6] gi|115281401|gb|ABI86918.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia ambifaria AMMD] gi|170133953|gb|EDT02307.1| translation initiation factor IF-3 [Burkholderia ambifaria IOP40-10] gi|171096357|gb|EDT41259.1| translation initiation factor IF-3 [Burkholderia ambifaria MEX-5] gi|171992969|gb|ACB63888.1| translation initiation factor IF-3 [Burkholderia ambifaria MC40-6] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|325528726|gb|EGD05796.1| translation initiation factor IF-3 [Burkholderia sp. TJI49] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI +P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLEEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|304439755|ref|ZP_07399653.1| translation initiation factor IF3 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371742|gb|EFM25350.1| translation initiation factor IF3 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 184 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLV+I P VC+I+D K RY + K E++KKQK IKE++ P I Sbjct: 46 LDLAIEKRLDLVKIAPQAKPPVCRIMDYGKYRYELIKREKESKKKQKVISIKEIRFTPSI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K GFL+ G +VK+SV+FRGRE+ H +LGRE+L N E + +D +P Sbjct: 106 EDHDLRTKANQTIGFLKRGDRVKVSVRFRGRELGHTELGREVLDNFVELISDNGVVDKKP 165 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 166 KMEGRSMVMFLNPK 179 >gi|24211784|sp|Q8PJE2|IF3_XANAC RecName: Full=Translation initiation factor IF-3 Length = 182 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 46 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P Sbjct: 106 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRP 165 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 166 RLEGRQMVMMIAPKK 180 >gi|325288436|ref|YP_004264617.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophobotulus glycolicus DSM 8271] gi|324963837|gb|ADY54616.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophobotulus glycolicus DSM 8271] Length = 173 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 67/133 (50%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A E LDLVEI + P VCK++D K +Y K E RKKQK IKEVK+RP I Sbjct: 35 MQIAGEKELDLVEIAPTAKPPVCKLMDYGKYKYEQAKKDKETRKKQKIVEIKEVKLRPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K + FL+DG KVK+++ FRGREIMH + GR L + E G S I+ EP Sbjct: 95 ETHDFETKARNAQRFLQDGDKVKVTIMFRGREIMHPEQGRVLCIRLAEFVGTDSTIEREP 154 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 155 KVEGRNMVMILTP 167 >gi|134295548|ref|YP_001119283.1| translation initiation factor 3 [Burkholderia vietnamiensis G4] gi|134138705|gb|ABO54448.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia vietnamiensis G4] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLLRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|239621209|ref|ZP_04664240.1| LOW QUALITY PROTEIN: translation initiation factor If-3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515670|gb|EEQ55537.1| LOW QUALITY PROTEIN: translation initiation factor If-3 [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 241 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 40 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 100 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKP 159 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 160 KQEGRNIIMTLAPK 173 >gi|78066087|ref|YP_368856.1| translation initiation factor 3 [Burkholderia sp. 383] gi|107022549|ref|YP_620876.1| translation initiation factor IF-3 [Burkholderia cenocepacia AU 1054] gi|116689498|ref|YP_835121.1| translation initiation factor IF-3 [Burkholderia cenocepacia HI2424] gi|170732803|ref|YP_001764750.1| translation initiation factor IF-3 [Burkholderia cenocepacia MC0-3] gi|254245608|ref|ZP_04938929.1| translation initiation factor IF-3 [Burkholderia cenocepacia PC184] gi|254252557|ref|ZP_04945875.1| translation initiation factor IF-3 [Burkholderia dolosa AUO158] gi|77966832|gb|ABB08212.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia sp. 383] gi|105892738|gb|ABF75903.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia cenocepacia AU 1054] gi|116647587|gb|ABK08228.1| bacterial translation initiation factor 3 (bIF-3) [Burkholderia cenocepacia HI2424] gi|124870384|gb|EAY62100.1| translation initiation factor IF-3 [Burkholderia cenocepacia PC184] gi|124895166|gb|EAY69046.1| translation initiation factor IF-3 [Burkholderia dolosa AUO158] gi|169816045|gb|ACA90628.1| translation initiation factor IF-3 [Burkholderia cenocepacia MC0-3] Length = 156 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|218667856|ref|YP_002426992.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520069|gb|ACK80655.1| translation initiation factor IF-3 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 172 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 54/127 (42%), Positives = 83/127 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI P VC+I+D K R+ K +A+++QK T +KE+K RP D D Q+K Sbjct: 45 LDLVEIAPQADPPVCRIMDYGKFRFQESKRQHDAKRRQKQTQVKEIKFRPRTDDADYQIK 104 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ I F+ DG + KI+++FRGRE+ H +LG ELL+ ++ E+ ++ P+ EGRQM+ Sbjct: 105 LRNILRFIEDGDRAKITLRFRGREMSHPELGMELLNRVERDLTEVGVVEQRPRMEGRQMV 164 Query: 129 MILSSKC 135 MI++ + Sbjct: 165 MIVAPRK 171 >gi|329118119|ref|ZP_08246831.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC BAA-1200] gi|327465779|gb|EGF12052.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC BAA-1200] Length = 134 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 91/133 (68%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E ++DLVEI + P VCK++D K +Y K EA+K QK IKE+K RP D Sbjct: 1 MAEEQDVDLVEISPTAKPPVCKLMDFGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK Sbjct: 61 GDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIEQFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 121 EGRQMVMMIAPKK 133 >gi|307325422|ref|ZP_07604624.1| translation initiation factor IF-3 [Streptomyces violaceusniger Tu 4113] gi|306888891|gb|EFN19875.1| translation initiation factor IF-3 [Streptomyces violaceusniger Tu 4113] Length = 177 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 7 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E E+ ++ P Sbjct: 67 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVQELGFVESSP 126 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 127 KQDGRNMIMVLGP 139 >gi|302335526|ref|YP_003800733.1| bacterial translation initiation factor 3 (bIF-3) [Olsenella uli DSM 7084] gi|301319366|gb|ADK67853.1| bacterial translation initiation factor 3 (bIF-3) [Olsenella uli DSM 7084] Length = 189 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI + P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 38 RIADEQNLDLVEIAPNAEPPVCKVMDYRKFKYEQDRKAKAARKKQVRVEVKEMKFRPKID 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FLR G +VK+++ FRGRE+ H + G +L + + + ++ +PK Sbjct: 98 VGDYTTKKNHVMRFLRKGARVKVTIMFRGREMAHPEQGLNVLERLAQDLKPYATVEQQPK 157 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 158 MEGRNMHMLVAP 169 >gi|256030619|ref|ZP_05444233.1| translation initiation factor IF-3 [Brucella pinnipedialis M292/94/1] Length = 134 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 75/134 (55%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQ++ IKE+KMRP I Sbjct: 1 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQRTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 61 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 121 KLEGRQMMMVLAPR 134 >gi|289177294|gb|ADC84540.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bifidobacterium animalis subsp. lactis BB-12] Length = 233 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 50 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G E+L + E ++ ++ P Sbjct: 110 DDHDFEVKKGHVERFLNAGDKVKVTIMLRGREQSRPIGGVEMLQRLAEEVSDLGTVEHAP 169 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 170 KQEGRNIIMTLAPK 183 >gi|17988293|ref|NP_540927.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. 16M] gi|23502965|ref|NP_699092.1| translation initiation factor IF-3 [Brucella suis 1330] gi|82700868|ref|YP_415442.1| translation initiation factor IF-3 [Brucella melitensis biovar Abortus 2308] gi|148559884|ref|YP_001259916.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840] gi|161620028|ref|YP_001593915.1| translation initiation factor IF-3 [Brucella canis ATCC 23365] gi|163844133|ref|YP_001628537.1| translation initiation factor IF-3 [Brucella suis ATCC 23445] gi|225626490|ref|ZP_03784529.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo] gi|225853544|ref|YP_002733777.1| translation initiation factor IF-3 [Brucella melitensis ATCC 23457] gi|237816462|ref|ZP_04595455.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A] gi|254690252|ref|ZP_05153506.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str. 870] gi|254694739|ref|ZP_05156567.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str. Tulya] gi|254696368|ref|ZP_05158196.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str. 86/8/59] gi|254700749|ref|ZP_05162577.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513] gi|254705121|ref|ZP_05166949.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686] gi|254707363|ref|ZP_05169191.1| translation initiation factor IF-3 [Brucella pinnipedialis M163/99/10] gi|254709094|ref|ZP_05170905.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94] gi|254713480|ref|ZP_05175291.1| translation initiation factor IF-3 [Brucella ceti M644/93/1] gi|254716164|ref|ZP_05177975.1| translation initiation factor IF-3 [Brucella ceti M13/05/1] gi|254718160|ref|ZP_05179971.1| translation initiation factor IF-3 [Brucella sp. 83/13] gi|254731282|ref|ZP_05189860.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str. 292] gi|256045722|ref|ZP_05448600.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str. Rev.1] gi|256060081|ref|ZP_05450263.1| translation initiation factor IF-3 [Brucella neotomae 5K33] gi|256112443|ref|ZP_05453364.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str. Ether] gi|256158618|ref|ZP_05456505.1| translation initiation factor IF-3 [Brucella ceti M490/95/1] gi|256254026|ref|ZP_05459562.1| translation initiation factor IF-3 [Brucella ceti B1/94] gi|256258505|ref|ZP_05464041.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str. C68] gi|256370515|ref|YP_003108026.1| translation initiation factor IF-3 [Brucella microti CCM 4915] gi|260169524|ref|ZP_05756335.1| translation initiation factor IF-3 [Brucella sp. F5/99] gi|17984064|gb|AAL53191.1| bacterial protein translation initiation factor 3 ( if-3) [Brucella melitensis bv. 1 str. 16M] gi|23349002|gb|AAN31007.1| translation initiation factor IF-3 [Brucella suis 1330] gi|82616969|emb|CAJ12077.1| Initiation factor 3 [Brucella melitensis biovar Abortus 2308] gi|148371141|gb|ABQ61120.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840] gi|161336839|gb|ABX63144.1| Translation initiation factor IF-3 [Brucella canis ATCC 23365] gi|163674856|gb|ABY38967.1| Translation initiation factor IF-3 [Brucella suis ATCC 23445] gi|225618147|gb|EEH15190.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo] gi|225641909|gb|ACO01823.1| Translation initiation factor IF-3 [Brucella melitensis ATCC 23457] gi|237788529|gb|EEP62744.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A] gi|256000678|gb|ACU49077.1| translation initiation factor IF-3 [Brucella microti CCM 4915] gi|326539834|gb|ADZ88049.1| translation initiation factor IF-3 [Brucella melitensis M5-90] Length = 134 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP I Sbjct: 1 MAMAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EP Sbjct: 61 DTHDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEP 120 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 121 KLEGRQMMMVLAPR 134 >gi|115522528|ref|YP_779439.1| translation initiation factor IF-3 [Rhodopseudomonas palustris BisA53] gi|115516475|gb|ABJ04459.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisA53] Length = 151 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 18 IKMAAEAGLDLVEISPNTAPPVCKIMDYGKFKYSAQKKAAEARKKQKVVEIKEIKLRPMI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A+ F +G KVKI++++RGRE+ HQD+G +LL +K E ++++ + Sbjct: 78 DDHDYDVKMRAMQRFFEEGDKVKITLRYRGREMAHQDIGIKLLEKVKTDVAEFAKVEQDA 137 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 138 RFEGRQVVMVLAPR 151 >gi|238027730|ref|YP_002911961.1| translation initiation factor IF-3 [Burkholderia glumae BGR1] gi|237876924|gb|ACR29257.1| Translation initiation factor IF-3 [Burkholderia glumae BGR1] Length = 156 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 141 MEGRQMIMVLAPKK 154 >gi|291544306|emb|CBL17415.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus sp. 18P13] Length = 189 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 80/134 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLV+I TP VC+I+D K + K EARK QK IKE++M ID Sbjct: 54 KIAYDKNLDLVKIAPQATPPVCRIMDYGKFCFEQAKREKEARKNQKVVEIKEIRMFSAID 113 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+ FL+ G K+K+SV+FR R I H LG ELL+ +E G+I+ +D K Sbjct: 114 THDFNTKVNQAIKFLQSGDKLKVSVRFRKRAIAHPHLGEELLARFREACGDIAVVDKPAK 173 Query: 122 FEGRQMIMILSSKC 135 EGR ++M +S K Sbjct: 174 MEGRSIVMFMSPKA 187 >gi|241762459|ref|ZP_04760536.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753471|ref|YP_003226364.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241372961|gb|EER62628.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552834|gb|ACV75780.1| translation initiation factor IF-3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 169 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+K+RP I Sbjct: 36 MEQAQEVGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKTQKTQEIKEIKLRPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K I FL DG KVK++++FRGRE+ H LG +++ ++ EI++++ P Sbjct: 96 DQHDYDTKMKKIVQFLEDGDKVKVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHP 155 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ K Sbjct: 156 RMEGRQMLMVVAPK 169 >gi|124385465|ref|YP_001026204.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10229] gi|126448600|ref|YP_001080525.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10247] gi|254358431|ref|ZP_04974704.1| translation initiation factor IF-3 [Burkholderia mallei 2002721280] gi|124293485|gb|ABN02754.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10229] gi|126241470|gb|ABO04563.1| translation initiation factor IF-3 [Burkholderia mallei NCTC 10247] gi|148027558|gb|EDK85579.1| translation initiation factor IF-3 [Burkholderia mallei 2002721280] Length = 156 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|332187437|ref|ZP_08389175.1| translation initiation factor IF-3 [Sphingomonas sp. S17] gi|332012598|gb|EGI54665.1| translation initiation factor IF-3 [Sphingomonas sp. S17] Length = 172 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQE LDLVE+ + P V K LD+ K +Y QK A ARK QK+ IKE+KMRP I Sbjct: 39 MAQAQELGLDLVEVSPNADPPVAKFLDVGKYKYEAQKKANLARKSQKTQEIKEIKMRPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K + F+ +G KVK++++FRGRE+ H LG +L + E+ E+++++ P Sbjct: 99 DDHDYDTKMKKVVEFIGEGDKVKVTMRFRGRELSHGQLGMNVLQRVAEQVAEVAKVEAYP 158 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 159 RMEGRQMLMVLAPK 172 >gi|83594817|ref|YP_428569.1| translation initiation factor 3 [Rhodospirillum rubrum ATCC 11170] gi|83577731|gb|ABC24282.1| bacterial translation initiation factor 3 (bIF-3) [Rhodospirillum rubrum ATCC 11170] Length = 173 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ A LDLVEI + P VCKILDL K +Y QK EA+KKQK IKE+K+RP I Sbjct: 40 LARAEAAGLDLVEISPNAEPPVCKILDLGKFKYEAQKKKNEAKKKQKVIEIKEIKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A FL +G KVK++++FRGRE+ HQDLG +L + E ++++++ P Sbjct: 100 DEHDYDVKMRAAKRFLEEGDKVKVTMRFRGREMAHQDLGMNVLKRVSEDVADLAKVEQHP 159 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+++ K Sbjct: 160 KLEGRQMIMVMAPK 173 >gi|256960039|ref|ZP_05564210.1| initiation factor 3 [Enterococcus faecalis Merz96] gi|293383792|ref|ZP_06629699.1| translation initiation factor IF-3 [Enterococcus faecalis R712] gi|293388732|ref|ZP_06633225.1| translation initiation factor IF-3 [Enterococcus faecalis S613] gi|312906992|ref|ZP_07765988.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 512] gi|312978750|ref|ZP_07790477.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 516] gi|256950535|gb|EEU67167.1| initiation factor 3 [Enterococcus faecalis Merz96] gi|291078868|gb|EFE16232.1| translation initiation factor IF-3 [Enterococcus faecalis R712] gi|291081889|gb|EFE18852.1| translation initiation factor IF-3 [Enterococcus faecalis S613] gi|310626977|gb|EFQ10260.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 512] gi|311288457|gb|EFQ67013.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO 516] Length = 173 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ANLDLV + P V +I+D K R+ QK EARKK+K +KEV++ P I Sbjct: 37 LQIAESANLDLVLVAPGAKPPVARIMDYGKFRFEQQKKEREARKKRKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+++L + E +I+ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + L+ K Sbjct: 157 KMDGRSMFLTLAPK 170 >gi|24211783|sp|Q8P7Z3|IF3_XANCP RecName: Full=Translation initiation factor IF-3 Length = 182 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 46 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 106 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRP 165 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 166 RLEGRQMVMMIAPKK 180 >gi|256394619|ref|YP_003116183.1| translation initiation factor IF-3 [Catenulispora acidiphila DSM 44928] gi|256360845|gb|ACU74342.1| translation initiation factor IF-3 [Catenulispora acidiphila DSM 44928] Length = 250 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P V K++D K +Y A EARK Q T IKE+K+RP I Sbjct: 35 LRLAQEQDLDLVEVAATARPPVVKVMDYGKYKYESALKAREARKNQAHTVIKEMKLRPKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL+ G KVKI++ FRGRE +LGR LLS + E E+ ++ P Sbjct: 95 DPHDYETKKGHVVRFLKAGDKVKITIMFRGREQSRPELGRRLLSKLAEDVAELGFVEFAP 154 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 155 KQDGRNMIMVLGP 167 >gi|94967744|ref|YP_589792.1| translation initiation factor 3 [Candidatus Koribacter versatilis Ellin345] gi|94549794|gb|ABF39718.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Koribacter versatilis Ellin345] Length = 249 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLVE+ + P VC+I+D K Y +K A+K Q +KEVK R + Sbjct: 72 LKLAKEKNLDLVEVSPTAQPPVCRIMDFGKFMYETEKRERAAKKHQHVITVKEVKFRINV 131 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + FL +G KVK ++ FRGRE+ Q LGRE+L + + G+ ++ P Sbjct: 132 DEHDYQTKKNHVLRFLGEGDKVKATIFFRGREMTRQGLGREILERVIKDIGDKGIVEFRP 191 Query: 121 KFEGRQMIMILSS 133 + EG + +IL+ Sbjct: 192 RQEGNTLHLILAP 204 >gi|297544946|ref|YP_003677248.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|307724048|ref|YP_003903799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513] gi|296842721|gb|ADH61237.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|307581109|gb|ADN54508.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513] Length = 183 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 50 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 110 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 169 Query: 122 FEGRQMIMILSSKC 135 EGR +IM+L+ + Sbjct: 170 MEGRNLIMVLTPRK 183 >gi|285017865|ref|YP_003375576.1| translation initiation factor if-3 [contains: if-3l; if-3s] protein [Xanthomonas albilineans GPE PC73] gi|283473083|emb|CBA15588.1| probable translation initiation factor if-3 [contains: if-3l; if-3s] protein [Xanthomonas albilineans] Length = 153 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 18 LAMAEEDGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKEIKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 78 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPKK 152 >gi|170721152|ref|YP_001748840.1| translation initiation factor IF-3 [Pseudomonas putida W619] gi|229486011|sp|B1J6U5|IF3_PSEPW RecName: Full=Translation initiation factor IF-3 gi|169759155|gb|ACA72471.1| translation initiation factor IF-3 [Pseudomonas putida W619] Length = 183 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPKK 181 >gi|289523103|ref|ZP_06439957.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503646|gb|EFD24810.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 168 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLVE+ P VC+I+D K RY QK EARKKQK +KE+KMRP I Sbjct: 19 LEMAETRGLDLVEVAPQANPPVCRIMDYGKYRYQQQKRDKEARKKQKVQTVKEIKMRPKI 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KAI FL G +VK+S+ FRGRE+ D GRE+L +K+ + + D +P Sbjct: 79 DEHDYNFKVKAIKDFLGSGHRVKVSIFFRGREMAFLDKGREVLERVKKDCEGLGKADSDP 138 Query: 121 KFEGRQMIMILSS 133 K EGR M M+L+ Sbjct: 139 KMEGRYMRMMLAP 151 >gi|224282677|ref|ZP_03645999.1| translation initiation factor IF-3 [Bifidobacterium bifidum NCIMB 41171] gi|310287136|ref|YP_003938394.1| infC Bacterial protein translation Initiation Factor 3 [Bifidobacterium bifidum S17] gi|311063999|ref|YP_003970724.1| protein translation initiation factor 3 (IF-3) InfC [Bifidobacterium bifidum PRL2010] gi|309251072|gb|ADO52820.1| infC Bacterial Protein Translation Initiation Factor 3 [Bifidobacterium bifidum S17] gi|310866318|gb|ADP35687.1| InfC Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bifidobacterium bifidum PRL2010] Length = 231 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAADVEEYGTVESRP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|319786722|ref|YP_004146197.1| translation initiation factor IF-3 [Pseudoxanthomonas suwonensis 11-1] gi|317465234|gb|ADV26966.1| translation initiation factor IF-3 [Pseudoxanthomonas suwonensis 11-1] Length = 189 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 94/135 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCK++D K ++ +QK A EA+KK + IKEVK RPV Sbjct: 54 LRLAEEEGLDLVEIQPNADPPVCKVMDFGKFKFEMQKKANEAKKKSRQVEIKEVKFRPVT 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGR++ + I+ GE I+ P Sbjct: 114 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGRQMAARIEGDLGEDIVIESRP 173 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 174 RLEGRQMVMMIAPKK 188 >gi|239978529|ref|ZP_04701053.1| translation initiation factor IF-3 [Streptomyces albus J1074] Length = 186 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVE+ ++ P VCK++D K +Y A EARK Q T IKE+K+RP I Sbjct: 7 LELAQEYDLDLVEVAATARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KVKI++ FRGRE +LG LL + E ++ I+ P Sbjct: 67 DPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLAEDVQDLGFIESNP 126 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L Sbjct: 127 KQDGRNMIMVLGP 139 >gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis mellifera] Length = 283 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 86/131 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA L+L+E+ + P V KI+D K +Y QK EARKKQK IKE+K+RP I Sbjct: 150 LKMAYAVGLNLLEVSPNADPPVAKIVDYGKFKYEQQKKKNEARKKQKVIDIKEIKVRPNI 209 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVKL A F+ G KVKI+++FRGRE+ HQ+LG +LL ++ E+++ + Sbjct: 210 DENDYQVKLNAAKRFIAGGDKVKITLRFRGREMAHQELGVQLLDRLRVDMEEVAKPEQTS 269 Query: 121 KFEGRQMIMIL 131 K E RQMIM+L Sbjct: 270 KIENRQMIMVL 280 >gi|253998430|ref|YP_003050493.1| translation initiation factor IF-3 [Methylovorus sp. SIP3-4] gi|253985109|gb|ACT49966.1| translation initiation factor IF-3 [Methylovorus sp. SIP3-4] Length = 174 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 61/130 (46%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA++DLVEI P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 40 AEEADIDLVEIAPQAQPPVCRLMDYGKFKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 99 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+++ FL++G K KI+++FRGREI HQ+LG LL ++ E + ++ PK E Sbjct: 100 DYQVKLRSLIRFLQEGDKAKITLRFRGREITHQELGLALLKRVEADLQEHAVVEQFPKME 159 Query: 124 GRQMIMILSS 133 GRQM+M+L Sbjct: 160 GRQMVMVLGP 169 >gi|256827013|ref|YP_003150972.1| translation initiation factor 3 [Cryptobacterium curtum DSM 15641] gi|256583156|gb|ACU94290.1| bacterial translation initiation factor 3 (bIF-3) [Cryptobacterium curtum DSM 15641] Length = 207 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 53/130 (40%), Positives = 77/130 (59%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A A LDLVEI + P VC+++D K +Y A +ARK Q IKE+K RP ID+ Sbjct: 53 ADMAGLDLVEIAPNAQPPVCRVMDYGKFKYEQAIKAKQARKNQSKIEIKEMKFRPKIDVG 112 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K K + FL G KVKI++ FRGRE+ H + G +L + + +++ I+ +PK E Sbjct: 113 DYTTKKKHVIRFLEQGNKVKITIMFRGREMAHPEQGLSILERLADDLKDMAAIEAQPKME 172 Query: 124 GRQMIMILSS 133 GR M M+++ Sbjct: 173 GRNMHMVIAP 182 >gi|315641763|ref|ZP_07896777.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952] gi|315482526|gb|EFU73064.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952] Length = 173 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ANLD+V + + P V +I+D K R+ QK EARKKQK +KEV++ P I Sbjct: 37 LKIAEQANLDVVLVAPTAKPPVARIMDYGKYRFEQQKKEREARKKQKVISVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KL+ FL G KVK S++F+GR I H+++G+ +L + E +++ ++ + Sbjct: 97 DVNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRLAEETADVATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPK 170 >gi|218779645|ref|YP_002430963.1| translation initiation factor IF-3 [Desulfatibacillum alkenivorans AK-01] gi|218761029|gb|ACL03495.1| translation initiation factor IF-3 [Desulfatibacillum alkenivorans AK-01] Length = 174 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ + LDLVE+ + +P VCKI+D K +Y K EA+KK S +KE+K+RP Sbjct: 38 LSVAEASGLDLVEVSPNASPPVCKIMDYGKFKYQQTKKLQEAKKKASSFSVKEIKVRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K+ I FL + KVK++V FRGREI D GR +L +++ E + ++ P Sbjct: 98 GDHDLDTKIGHIKRFLANNDKVKVTVMFRGREIAFADRGRAMLKRVQDATAEFAVVEQFP 157 Query: 121 KFEGRQMIMILSSKC 135 KFEGR MIM+L+ K Sbjct: 158 KFEGRTMIMVLAPKA 172 >gi|94495623|ref|ZP_01302203.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58] gi|94425011|gb|EAT10032.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58] Length = 140 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCK LD+ K +Y QK A ARK QK+ +KE+KMRP I Sbjct: 7 IEQAYEIGLDLVEVSPNADPPVCKFLDIGKFKYEAQKKANIARKTQKTQELKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+K + F+ DG KVKI+++FRGRE+ HQ LG LL + E EI++++ P Sbjct: 67 DDHDYETKMKKVHDFIGDGDKVKITLRFRGRELSHQQLGMNLLQRVAENVQEIAKVEAYP 126 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+L+ K Sbjct: 127 RMEGRQMLMVLAPK 140 >gi|148548432|ref|YP_001268534.1| translation initiation factor IF-3 [Pseudomonas putida F1] gi|167034476|ref|YP_001669707.1| translation initiation factor IF-3 [Pseudomonas putida GB-1] gi|37999407|sp|Q88K26|IF3_PSEPK RecName: Full=Translation initiation factor IF-3 gi|166198967|sp|A5W5E0|IF3_PSEP1 RecName: Full=Translation initiation factor IF-3 gi|189028356|sp|B0KKR7|IF3_PSEPG RecName: Full=Translation initiation factor IF-3 gi|148512490|gb|ABQ79350.1| bacterial translation initiation factor 3 (bIF-3) [Pseudomonas putida F1] gi|166860964|gb|ABY99371.1| translation initiation factor IF-3 [Pseudomonas putida GB-1] gi|313499445|gb|ADR60811.1| InfC [Pseudomonas putida BIRD-1] Length = 183 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA LDLVEI + P VCK++D K + +K A EA+K QK IKE+K RP Sbjct: 47 LRIADEAKLDLVEISADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K KIS++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EDGDYQVKLRNLVRFLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 167 KMEGRQLMMVIAPKK 181 >gi|242278820|ref|YP_002990949.1| translation initiation factor IF-3 [Desulfovibrio salexigens DSM 2638] gi|242121714|gb|ACS79410.1| translation initiation factor IF-3 [Desulfovibrio salexigens DSM 2638] Length = 154 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 62/133 (46%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ LDLVE+ P VCKI+D K +Y QK EA+KKQ IKEVK RP Sbjct: 19 LEIAQDRGLDLVEVAEKANPPVCKIMDYGKFKYQQQKRKQEAKKKQTVIQIKEVKFRPKT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL G + K+++ FRGREI+H+D G +L +KE +IS+++ P Sbjct: 79 DEHDYQTKLKHIRRFLEGGDRCKVTIFFRGREIVHKDRGLAVLERVKEETQDISKMEQAP 138 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 139 RSEGRTMNMMLAP 151 >gi|296119682|ref|ZP_06838240.1| translation initiation factor IF-3 [Corynebacterium ammoniagenes DSM 20306] gi|295967565|gb|EFG80832.1| translation initiation factor IF-3 [Corynebacterium ammoniagenes DSM 20306] Length = 156 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 76/132 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 19 KLAFEADLDLVEVAPNAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E E ++ PK Sbjct: 79 DHDYETKKANVVRFLEKGSKVKVTIMFRGREQSRPELGYRLLERLAEDVAESGIVESRPK 138 Query: 122 FEGRQMIMILSS 133 +GR M M+ Sbjct: 139 QDGRNMTMVFGP 150 >gi|330994119|ref|ZP_08318047.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1] gi|329758586|gb|EGG75102.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1] Length = 193 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A LDL+EI + P V K+LD K +Y QK EARKKQK IKEVK+RP I Sbjct: 60 LARAYSVGLDLLEISPNAEPPVAKVLDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L I+ E+++++ P Sbjct: 120 DENDYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGVKVLERIRTEMDELAKVEHMP 179 Query: 121 KFEGRQMIMILSSK 134 K E RQMIM+L+ + Sbjct: 180 KLENRQMIMVLAPR 193 >gi|257069327|ref|YP_003155582.1| translation initiation factor 3 [Brachybacterium faecium DSM 4810] gi|256560145|gb|ACU85992.1| bacterial translation initiation factor 3 (bIF-3) [Brachybacterium faecium DSM 4810] Length = 208 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ P V +++D K +Y A EARK Q +T KE++M I Sbjct: 34 LRLAQEADLDLVEVAPGANPPVARLMDYGKYKYEANLKAREARKNQANTVQKEIRMGLKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + ++ FL G KVK+ ++FRGRE + G +LL + E + ++ P Sbjct: 94 DTHDYETKRRNVEKFLDGGDKVKVIIRFRGREQARPERGVKLLQRMAEDVADYGFVESHP 153 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+ Sbjct: 154 RQDGRNMVMVFGP 166 >gi|291295603|ref|YP_003507001.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279] gi|290470562|gb|ADD27981.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279] Length = 173 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLV + + P V ++LD K RY Q+ EARKK K T +K +K+RP I Sbjct: 23 LRMAKEREYDLVLVSPNSVPPVARLLDYGKWRYEQQQAEKEARKKAKRTELKSMKLRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL I FL +G KVK+++ FRGRE+ HQ+LG +LL + + + ++ P Sbjct: 83 ETHDYNTKLSHIRRFLEEGHKVKVTIMFRGREMAHQELGYKLLERVAKDLEGVGFVEMRP 142 Query: 121 KFEGRQMIMILSS 133 + GR M M+++ Sbjct: 143 EMLGRDMNMVMAP 155 >gi|329904274|ref|ZP_08273746.1| Translation initiation factor 3 [Oxalobacteraceae bacterium IMCC9480] gi|327548051|gb|EGF32783.1| Translation initiation factor 3 [Oxalobacteraceae bacterium IMCC9480] Length = 154 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+EAN+DLVEI + P V +++D K +Y QK A EA+ +QK +KEVK RP D Sbjct: 19 RMAEEANVDLVEIAPTAQPPVARLMDYGKFKYQEQKRAHEAKLRQKIILVKEVKFRPGTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL +G K KI+++FRGRE+ HQD+G +L +K +++ PK Sbjct: 79 DGDYGIKLRNLIKFLDEGDKTKITLRFRGREMAHQDIGVRMLERLKLDLEPYGQVEQWPK 138 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+L+ K Sbjct: 139 MEGRQMIMVLAPKK 152 >gi|116495180|ref|YP_806914.1| translation initiation factor 3 [Lactobacillus casei ATCC 334] gi|191638688|ref|YP_001987854.1| Translation initiation factor IF-3 [Lactobacillus casei BL23] gi|227534804|ref|ZP_03964853.1| translation initiation factor IF3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239632061|ref|ZP_04675092.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066743|ref|YP_003788766.1| translation initiation factor 3 [Lactobacillus casei str. Zhang] gi|116105330|gb|ABJ70472.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus casei ATCC 334] gi|190712990|emb|CAQ66996.1| Translation initiation factor IF-3 [Lactobacillus casei BL23] gi|227187560|gb|EEI67627.1| translation initiation factor IF3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526526|gb|EEQ65527.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439150|gb|ADK18916.1| Translation initiation factor 3 (IF-3) [Lactobacillus casei str. Zhang] gi|327382729|gb|AEA54205.1| Translation initiation factor IF-3 [Lactobacillus casei LC2W] gi|327385916|gb|AEA57390.1| Translation initiation factor IF-3 [Lactobacillus casei BD-II] Length = 154 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 18 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + EI+ ++ P Sbjct: 78 GEADFNTRLKNATKFLEKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKEIAAVETHP 137 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 138 KMDGRSMFLMLAPRA 152 >gi|15964035|ref|NP_384388.1| translation initiation factor IF-3 [Sinorhizobium meliloti 1021] gi|307301181|ref|ZP_07580943.1| translation initiation factor IF-3 [Sinorhizobium meliloti BL225C] gi|307321082|ref|ZP_07600487.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83] gi|15073211|emb|CAC41719.1| Probable translation initiation factor IF-3 protein [Sinorhizobium meliloti 1021] gi|306893254|gb|EFN24035.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83] gi|306903637|gb|EFN34224.1| translation initiation factor IF-3 [Sinorhizobium meliloti BL225C] Length = 143 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 77/134 (57%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 10 LRMADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EP Sbjct: 70 DTHDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEP 129 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 130 KLEGRQMMMVLAPK 143 >gi|239833158|ref|ZP_04681487.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG 3301] gi|239825425|gb|EEQ96993.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG 3301] gi|326410116|gb|ADZ67181.1| translation initiation factor IF-3 [Brucella melitensis M28] Length = 132 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 75/132 (56%), Positives = 100/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLVEI + P VCKI+DL KL+Y QK A EARKKQK+ IKE+KMRP ID Sbjct: 1 MAEEAGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK+KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EPK Sbjct: 61 HDYEVKMKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKL 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 121 EGRQMMMVLAPR 132 >gi|163790750|ref|ZP_02185176.1| translation initiation factor IF-3 [Carnobacterium sp. AT7] gi|159873930|gb|EDP68008.1| translation initiation factor IF-3 [Carnobacterium sp. AT7] Length = 173 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EANLDLV + P V +I+D K R+ QK EARK QK IKEV++ P I Sbjct: 37 LKLAEEANLDLVLVAPKAKPPVARIMDHGKFRFEQQKKEREARKNQKVISIKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+ +G+E+L + + +IS I+ Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKGIGKEVLDRLAKETADISTIESAA 156 Query: 121 KFEGRQMIMILSSKC 135 K +GR M +IL+ K Sbjct: 157 KMDGRSMFLILAPKT 171 >gi|39931212|sp|Q7NYC5|IF3_CHRVO RecName: Full=Translation initiation factor IF-3 Length = 175 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+E ++DLVEI + P VCK++D K +Y K EA++KQK IKE+K RP Sbjct: 40 MALAEENDVDLVEISPTAQPPVCKLMDYGKYKYEQSKKRHEAKQKQKQVQIKEIKFRPGT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 100 DDGDYNVKLRNLVRFLTEGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 159 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 160 RLEGRQMVMMIAPKK 174 >gi|312898389|ref|ZP_07757779.1| translation initiation factor IF-3 [Megasphaera micronuciformis F0359] gi|310620308|gb|EFQ03878.1| translation initiation factor IF-3 [Megasphaera micronuciformis F0359] Length = 167 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 89/131 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A+E +LDLVEI ++ P VC+I++ K RY QK EA+KKQK +KEVK+RP I+ Sbjct: 32 QIAEERHLDLVEIAANAKPPVCRIMNYGKYRYEQQKREKEAKKKQKVLTLKEVKLRPNIE 91 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+KA FL +G KVK+++ FRGRE+ H +LG +LL + E++ ++ PK Sbjct: 92 DHDFYVKMKAAQRFLDEGSKVKVTIMFRGREMSHPELGEKLLIRFADELKEVAHVEKAPK 151 Query: 122 FEGRQMIMILS 132 EGR M M+++ Sbjct: 152 IEGRNMTMVIA 162 >gi|315498629|ref|YP_004087433.1| translation initiation factor if-3 [Asticcacaulis excentricus CB 48] gi|315416641|gb|ADU13282.1| translation initiation factor IF-3 [Asticcacaulis excentricus CB 48] Length = 173 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 67/127 (52%), Positives = 89/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ + P VCKILD K R+ QK EARKKQK IKE+K+RP ID HD +V Sbjct: 47 GLDLVEVSPTADPPVCKILDYGKYRFQEQKKKAEARKKQKVVEIKEIKLRPNIDKHDYEV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F +G KVK++++FRGRE+ H +LG +LL+ +K F ++++ EPK EGRQM Sbjct: 107 KAKAMTRFFEEGDKVKVTLRFRGREMAHPELGMKLLNQVKADFEATTKVEYEPKMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ K Sbjct: 167 IMILAPK 173 >gi|118595088|ref|ZP_01552435.1| Initiation factor 3 [Methylophilales bacterium HTCC2181] gi|118440866|gb|EAV47493.1| Initiation factor 3 [Methylophilales bacterium HTCC2181] Length = 178 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ DLVEI P VC+++D K +Y+ K EA+ KQK+ +KEVK RP Sbjct: 15 IAQAEDLETDLVEIAPKAKPPVCRLMDYGKFKYSQSKKLHEAKTKQKNVQVKEVKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL+ + FL DG K K++++FRGREI HQ LG LL ++ E ++ P Sbjct: 75 DDNDYNVKLRNLIRFLGDGDKTKVTLRFRGREIAHQQLGMALLKRVEADLEEYGVVEQFP 134 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L Sbjct: 135 KMEGRQMVMVLQP 147 >gi|167562967|ref|ZP_02355883.1| translation initiation factor IF-3 [Burkholderia oklahomensis EO147] gi|167570155|ref|ZP_02363029.1| translation initiation factor IF-3 [Burkholderia oklahomensis C6786] Length = 156 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|297181833|gb|ADI18012.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0200_19J16] Length = 144 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A+LDLVE+ P VC+++D K +Y K + AR+ QK +KEVKM+P I Sbjct: 7 LEMAENADLDLVEVSPKANPPVCRLMDYGKFKYQQSKRSHVARQNQKIVHLKEVKMKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ I+ Sbjct: 67 EEHDFQFKLRNALRFLEDGDKVKVGVRFMGRQIAHKDLGIELLEKFQAEIGDGGTIEQPI 126 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 127 TSEGRSMHMILAP 139 >gi|300767160|ref|ZP_07077072.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180380|ref|YP_003924508.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ST-III] gi|300494979|gb|EFK30135.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045871|gb|ADN98414.1| translation initiation factor IF3 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 166 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A+LDLV + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 30 MQIAEDASLDLVLVAPKAKPPVARIMDYGKYRFEQQKKDREARKKQKVVSIKEVRLSPAI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK + FL G KV++S++F+GR I H+D+GR++L+ + E E S ++ P Sbjct: 90 DTNDFNTKLKHAEKFLSKGDKVRVSIRFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 150 KMDGRSMFLVLAPKT 164 >gi|261337538|ref|ZP_05965422.1| translation initiation factor IF-3 [Bifidobacterium gallicum DSM 20093] gi|270277944|gb|EFA23798.1| translation initiation factor IF-3 [Bifidobacterium gallicum DSM 20093] Length = 225 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPHAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G ELL + + E+ I+ P Sbjct: 101 DDHDFEVKKGHVERFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLADEVSEVGTIESAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|28378229|ref|NP_785121.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1] gi|254556436|ref|YP_003062853.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1] gi|38257838|sp|Q88WU8|IF3_LACPL RecName: Full=Translation initiation factor IF-3 gi|28271064|emb|CAD63969.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1] gi|254045363|gb|ACT62156.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1] Length = 173 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A++A+LDLV + P V +I+D K R+ QK EARKKQK IKEV++ P I Sbjct: 37 MQIAEDASLDLVLVAPKAKPPVARIMDYGKYRFEQQKKDREARKKQKVVSIKEVRLSPAI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK + FL G KV++S++F+GR I H+D+GR++L+ + E E S ++ P Sbjct: 97 DTNDFNTKLKHAEKFLSKGDKVRVSIRFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYP 156 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ K Sbjct: 157 KMDGRSMFLVLAPKT 171 >gi|262091710|gb|ACY25300.1| translation initiation factor IF-3 [uncultured actinobacterium] Length = 239 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLVE+ + P VC+I+D K RY + E+RKK +KEVK RP I Sbjct: 67 LERARTAELDLVEVAAQADPPVCRIMDYGKFRYEESQRLKESRKKTVQITMKEVKFRPKI 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K++ + FL +G KVK++++FRGRE+ H +LGR++L + E+ G I+R+D Sbjct: 127 GKGDFDTKVRHMHEFLGEGHKVKVTLQFRGREVAHPELGRKILDAVIEQLGPIARVDTMA 186 Query: 121 KFEGRQMIMILSS 133 + EGR M M+LS Sbjct: 187 RLEGRNMTMVLSP 199 >gi|295395436|ref|ZP_06805635.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC 49030] gi|294971758|gb|EFG47634.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC 49030] Length = 245 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ A+LDLVE+ P V K++D K +Y + A EARK Q + +KE++ R I Sbjct: 70 LDLARSADLDLVEVAPQAKPPVVKLMDYGKFKYESAQKAREARKNQANMALKEIRFRLKI 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL G KVK+ + FRGRE ++G +LL+ + + ++ ++ P Sbjct: 130 DDHDYETKKGHVSRFLSGGDKVKVMIMFRGREQSRPEMGMKLLNKLADEVADLGTVESAP 189 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+++ Sbjct: 190 RVDGRNMVMVIAP 202 >gi|53725297|ref|YP_102786.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 23344] gi|76809353|ref|YP_333291.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710b] gi|83718960|ref|YP_443110.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] gi|121599491|ref|YP_992865.1| translation initiation factor IF-3 [Burkholderia mallei SAVP1] gi|126441225|ref|YP_001058753.1| translation initiation factor IF-3 [Burkholderia pseudomallei 668] gi|126452447|ref|YP_001066006.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106a] gi|217423685|ref|ZP_03455186.1| translation initiation factor IF-3 [Burkholderia pseudomallei 576] gi|237812017|ref|YP_002896468.1| translation initiation factor IF-3 [Burkholderia pseudomallei MSHR346] gi|238562604|ref|ZP_00440147.2| translation initiation factor IF-3 [Burkholderia mallei GB8 horse 4] gi|242316659|ref|ZP_04815675.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106b] gi|251767933|ref|ZP_02268879.2| translation initiation factor IF-3 [Burkholderia mallei PRL-20] gi|254178720|ref|ZP_04885375.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 10399] gi|254180003|ref|ZP_04886602.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1655] gi|254188583|ref|ZP_04895094.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pasteur 52237] gi|254198031|ref|ZP_04904453.1| translation initiation factor IF-3 [Burkholderia pseudomallei S13] gi|254199738|ref|ZP_04906104.1| translation initiation factor IF-3 [Burkholderia mallei FMH] gi|254206060|ref|ZP_04912412.1| translation initiation factor IF-3 [Burkholderia mallei JHU] gi|254259737|ref|ZP_04950791.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710a] gi|52428720|gb|AAU49313.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 23344] gi|76578806|gb|ABA48281.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710b] gi|83652785|gb|ABC36848.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] gi|121228301|gb|ABM50819.1| translation initiation factor IF-3 [Burkholderia mallei SAVP1] gi|126220718|gb|ABN84224.1| translation initiation factor IF-3 [Burkholderia pseudomallei 668] gi|126226089|gb|ABN89629.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106a] gi|147749334|gb|EDK56408.1| translation initiation factor IF-3 [Burkholderia mallei FMH] gi|147753503|gb|EDK60568.1| translation initiation factor IF-3 [Burkholderia mallei JHU] gi|157936262|gb|EDO91932.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pasteur 52237] gi|160699759|gb|EDP89729.1| translation initiation factor IF-3 [Burkholderia mallei ATCC 10399] gi|169654772|gb|EDS87465.1| translation initiation factor IF-3 [Burkholderia pseudomallei S13] gi|184210543|gb|EDU07586.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1655] gi|217393543|gb|EEC33564.1| translation initiation factor IF-3 [Burkholderia pseudomallei 576] gi|237504465|gb|ACQ96783.1| translation initiation factor IF-3 [Burkholderia pseudomallei MSHR346] gi|238522289|gb|EEP85734.1| translation initiation factor IF-3 [Burkholderia mallei GB8 horse 4] gi|242139898|gb|EES26300.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1106b] gi|243061340|gb|EES43526.1| translation initiation factor IF-3 [Burkholderia mallei PRL-20] gi|254218426|gb|EET07810.1| translation initiation factor IF-3 [Burkholderia pseudomallei 1710a] Length = 156 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + ++E ++DLVEI P VC+++D K +Y K EA+ KQK +KEVK RP D Sbjct: 21 RKSEELDVDLVEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D VKL+ + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK Sbjct: 81 DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQMIM+LS K Sbjct: 141 MEGRQMIMVLSPKK 154 >gi|313200505|ref|YP_004039163.1| translation initiation factor if-3 [Methylovorus sp. MP688] gi|312439821|gb|ADQ83927.1| translation initiation factor IF-3 [Methylovorus sp. MP688] Length = 154 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 61/130 (46%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA++DLVEI P VC+++D K +Y K EAR KQK +KEVK RP D Sbjct: 20 AEEADIDLVEIAPQAQPPVCRLMDYGKFKYAESKRQHEARLKQKQVQVKEVKFRPGTDEG 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D QVKL+++ FL++G K KI+++FRGREI HQ+LG LL ++ E + ++ PK E Sbjct: 80 DYQVKLRSLIRFLQEGDKAKITLRFRGREITHQELGLALLKRVEADLQEHAVVEQFPKME 139 Query: 124 GRQMIMILSS 133 GRQM+M+L Sbjct: 140 GRQMVMVLGP 149 >gi|332686210|ref|YP_004455984.1| translation initiation factor 3 [Melissococcus plutonius ATCC 35311] gi|332370219|dbj|BAK21175.1| translation initiation factor 3 [Melissococcus plutonius ATCC 35311] Length = 173 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ ANLDLV + P V +I+D K + QK EARKKQK +KEV++ P I Sbjct: 37 LKQAEAANLDLVLVAPGAKPPVARIMDYGKFHFEQQKKEREARKKQKVINVKEVRLSPTI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+D KL+ FL G KVK S++F+GR I H+++G+E+L + + +I+ ++ + Sbjct: 97 DLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQEVLDRLAKETADIATVEQKA 156 Query: 121 KFEGRQMIMILSSK 134 K +GR M + LS K Sbjct: 157 KMDGRSMFLTLSPK 170 >gi|229552545|ref|ZP_04441270.1| translation initiation factor IF3 [Lactobacillus rhamnosus LMS2-1] gi|258508742|ref|YP_003171493.1| translation initiation factor 3 [Lactobacillus rhamnosus GG] gi|258539918|ref|YP_003174417.1| translation initiation factor IF-3 infC [Lactobacillus rhamnosus Lc 705] gi|229314097|gb|EEN80070.1| translation initiation factor IF3 [Lactobacillus rhamnosus LMS2-1] gi|257148669|emb|CAR87642.1| Translation initiation factor IF-3 [Lactobacillus rhamnosus GG] gi|257151594|emb|CAR90566.1| Translation initiation factor IF-3 [Lactobacillus rhamnosus Lc 705] gi|259650048|dbj|BAI42210.1| translation initiation factor IF-3 [Lactobacillus rhamnosus GG] Length = 154 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 18 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 78 GEADFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 137 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 138 KMDGRSMFLMLAPRA 152 >gi|296117436|ref|ZP_06836024.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC 23769] gi|295976038|gb|EFG82828.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC 23769] Length = 173 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 92/134 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP I Sbjct: 40 LARAYASGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L ++ EI++++ P Sbjct: 100 DENDYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGIKVLERVRSEMDEIAKVEHMP 159 Query: 121 KFEGRQMIMILSSK 134 K E RQMIM+L+ + Sbjct: 160 KLENRQMIMVLAPR 173 >gi|254410410|ref|ZP_05024189.1| translation initiation factor IF-3 [Microcoleus chthonoplastes PCC 7420] gi|196182616|gb|EDX77601.1| translation initiation factor IF-3 [Microcoleus chthonoplastes PCC 7420] Length = 175 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 41 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ A FL+ G KVK ++ FRGREI H +L +LL + +++ + P Sbjct: 101 DDHDYQVRVNAARRFLKSGDKVKATITFRGREIQHANLAEDLLKRMATDLQDVAEVQQAP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LSSK Sbjct: 161 KREGRNMMMLLSSKK 175 >gi|269792335|ref|YP_003317239.1| translation initiation factor IF-3 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099970|gb|ACZ18957.1| translation initiation factor IF-3 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 194 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 62/133 (46%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ P VCKI+D K R+ QK +ARKKQKS +KE+KMRP I Sbjct: 27 LRMAEERELDLVEVAPLAKPPVCKIMDYGKYRFQQQKRDKDARKKQKSQALKEIKMRPKI 86 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD K+KA+ FL DG +VK+SV FRGRE+ D GRE+L +++ ++ +++ EP Sbjct: 87 DVHDYTFKVKAVRSFLEDGHRVKVSVFFRGREMAFLDRGREVLDRVRKDVEDLGKVEMEP 146 Query: 121 KFEGRQMIMILSS 133 + EG M M+++ Sbjct: 147 RMEGSYMRMMIAP 159 >gi|254420070|ref|ZP_05033794.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3] gi|196186247|gb|EDX81223.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3] Length = 162 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 66/134 (49%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI S+ P V KILD K R+ QK E RK+QK +KE+K+RP I Sbjct: 29 LEAAEEAGMDLVEIVSTSEPPVAKILDYGKHRFQEQKKKAEQRKRQKVVELKEIKLRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++ F EI++++ P Sbjct: 89 DTHDYEVKAKAMHRFFDEGDKVKVTLRFRGREMAHPELGMKLLNKVQADFDEIAKVEFAP 148 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIMIL+ + Sbjct: 149 KMEGRQMIMILAPR 162 >gi|183602462|ref|ZP_02963828.1| translation initiation factor If-3 [Bifidobacterium animalis subsp. lactis HN019] gi|219683224|ref|YP_002469607.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis AD011] gi|241191184|ref|YP_002968578.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196590|ref|YP_002970145.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218381|gb|EDT89026.1| translation initiation factor If-3 [Bifidobacterium animalis subsp. lactis HN019] gi|219620874|gb|ACL29031.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis AD011] gi|240249576|gb|ACS46516.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251144|gb|ACS48083.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794177|gb|ADG33712.1| translation initiation factor IF-3 [Bifidobacterium animalis subsp. lactis V9] Length = 224 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKQREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK ++ FL G KVK+++ RGRE G E+L + E ++ ++ P Sbjct: 101 DDHDFEVKKGHVERFLNAGDKVKVTIMLRGREQSRPIGGVEMLQRLAEEVSDLGTVEHAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|323698512|ref|ZP_08110424.1| translation initiation factor IF-3 [Desulfovibrio sp. ND132] gi|323458444|gb|EGB14309.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans ND132] Length = 182 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVE+ + P VCKI+D K +Y QK EA+KKQ IKEVK RP Sbjct: 47 LDRAREKGLDLVEVAPNADPPVCKIMDYGKFKYQQQKKLQEAKKKQTVIKIKEVKFRPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL G + K+++ FRGREI+H+D G +L + ++++++ +P Sbjct: 107 DEHDYQTKLKNIVKFLEGGDRCKVTIFFRGREIVHKDRGLAVLERVVVDTQDLAKVESKP 166 Query: 121 KFEGRQMIMILSS 133 EGR M M+L+ Sbjct: 167 MAEGRTMTMMLAP 179 >gi|167037184|ref|YP_001664762.1| translation initiation factor IF-3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307267647|ref|ZP_07549109.1| translation initiation factor IF-3 [Thermoanaerobacter wiegelii Rt8.B1] gi|326391475|ref|ZP_08213010.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus JW 200] gi|166856018|gb|ABY94426.1| translation initiation factor IF-3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306917336|gb|EFN47648.1| translation initiation factor IF-3 [Thermoanaerobacter wiegelii Rt8.B1] gi|325992501|gb|EGD50958.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus JW 200] Length = 141 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 8 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKIINVKEIRMSPTIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKLK+ FL++G KVK++++FRGRE H L +LL E I+ P Sbjct: 68 DHDFGVKLKSAIKFLKEGNKVKVTIRFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPN 127 Query: 122 FEGRQMIMILSSKC 135 EGR ++M+L+ K Sbjct: 128 IEGRNLMMVLTPKS 141 >gi|83944920|ref|ZP_00957286.1| translation initiation factor [Oceanicaulis alexandrii HTCC2633] gi|83851702|gb|EAP89557.1| translation initiation factor [Oceanicaulis alexandrii HTCC2633] Length = 140 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 98/134 (73%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLVE+ + P VCKI+D KL+Y QK EARKKQK+ +KE+KMRP I Sbjct: 7 LEAAAEVGLDLVEVSPNANPPVCKIVDYGKLKYQEQKKKAEARKKQKTQDVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD QVK KA+ F DG KVK++++FRGRE+ HQ+ G +++ +KE F E+++++ EP Sbjct: 67 DIHDYQVKTKAMTRFFEDGDKVKVTLRFRGREMAHQERGMDVMKRVKEDFSEVAKVELEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+++ + Sbjct: 127 KLEGRQMIMVMAPR 140 >gi|144899403|emb|CAM76267.1| Initiation factor 3 [Magnetospirillum gryphiswaldense MSR-1] Length = 173 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVE+ + P VCKILD K +Y QK EA+KKQK +KE+K+RP I Sbjct: 40 LVMAEEAGLDLVEVSPNADPPVCKILDYGKFKYEAQKKKAEAKKKQKVIEVKEIKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK++A+ FL +G KVK++++FRGRE+ HQDLG ++L +++ ++ +I+ P Sbjct: 100 DDNDYGVKMRAMRKFLEEGDKVKVTLRFRGRELAHQDLGMKVLERVRDDLEDLGKIEQVP 159 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M++S K Sbjct: 160 KMEGRQMVMVVSPK 173 >gi|281417896|ref|ZP_06248916.1| translation initiation factor IF-3 [Clostridium thermocellum JW20] gi|281409298|gb|EFB39556.1| translation initiation factor IF-3 [Clostridium thermocellum JW20] gi|316940066|gb|ADU74100.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 1313] Length = 173 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VC+I+D K + + K EARK QK +KEV++ I+ Sbjct: 40 KIANAKNLDLVKIAPQAVPPVCRIMDYGKYMFELAKKEKEARKNQKVINVKEVRLSASIE 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL+DG KVK+SVKFRGRE+ + LG+++L E +++ ++ +PK Sbjct: 100 EHDFNFKLKNALRFLKDGDKVKVSVKFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPK 159 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 160 LEGRNMFMILNPK 172 >gi|111224589|ref|YP_715383.1| protein chain initiation factor 3 [Frankia alni ACN14a] gi|111152121|emb|CAJ63849.1| Protein chain initiation factor 3, IF3, InfC [Frankia alni ACN14a] Length = 147 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQEA+LDLVE+ + P VCK++D K +Y + EARK Q T IKE+K+RP ID Sbjct: 1 MAQEADLDLVEVAPTARPPVCKLMDFGKFKYESDQKRREARKNQVQTVIKEMKLRPKIDP 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K + FLR G KVKI++ FRGRE +LG LL + E+ ++ +PK Sbjct: 61 HDYETKKGHVVRFLRAGDKVKITIMFRGREQSRPELGIRLLQRLSADVAELGYVEAQPKQ 120 Query: 123 EGRQMIMILSS 133 +GR M M+++ Sbjct: 121 DGRNMTMVMAP 131 >gi|332637333|ref|ZP_08416196.1| translation initiation factor IF-3 [Weissella cibaria KACC 11862] Length = 165 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 79/132 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLV + ++ P V KI+D K R+ QK E RK QK IKEV++ P ID Sbjct: 31 IADEQELDLVLVQANAKPPVAKIMDYGKFRFDSQKKQREQRKNQKIVSIKEVRLSPTIDD 90 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D K K FL G KVK+S++FRGR I H+++GRE++ EI++++ K Sbjct: 91 NDFNTKKKNAVKFLEKGNKVKVSIRFRGRAITHKEIGREVMDRFATDLEEIAKVESRAKM 150 Query: 123 EGRQMIMILSSK 134 EGR M M+L+ K Sbjct: 151 EGRSMFMVLAPK 162 >gi|23335405|ref|ZP_00120641.1| COG0290: Translation initiation factor 3 (IF-3) [Bifidobacterium longum DJO10A] gi|23465927|ref|NP_696530.1| translation initiation factor IF-3 [Bifidobacterium longum NCC2705] gi|189439095|ref|YP_001954176.1| translation initiation factor 3 [Bifidobacterium longum DJO10A] gi|213691794|ref|YP_002322380.1| initiation factor 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227547604|ref|ZP_03977653.1| translation initiation factor 3 (IF-3) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|312132532|ref|YP_003999871.1| infc [Bifidobacterium longum subsp. longum BBMN68] gi|317482511|ref|ZP_07941527.1| translation initiation factor IF-3 domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322689459|ref|YP_004209193.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis 157F] gi|322691427|ref|YP_004220997.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. longum JCM 1217] gi|23326636|gb|AAN25166.1| translation initiation factor If-3 [Bifidobacterium longum NCC2705] gi|189427530|gb|ACD97678.1| Translation initiation factor 3 [Bifidobacterium longum DJO10A] gi|213523255|gb|ACJ52002.1| initiation factor 3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|227211859|gb|EEI79755.1| translation initiation factor 3 (IF-3) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|311773466|gb|ADQ02954.1| InfC [Bifidobacterium longum subsp. longum BBMN68] gi|316916063|gb|EFV37469.1| translation initiation factor IF-3 domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320456283|dbj|BAJ66905.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. longum JCM 1217] gi|320457888|dbj|BAJ68509.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320460795|dbj|BAJ71415.1| translation initiation factor IF-3 [Bifidobacterium longum subsp. infantis 157F] Length = 211 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 10 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGREI G ELL + + E ++ +P Sbjct: 70 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKP 129 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 130 KQEGRNIIMTLAPK 143 >gi|84496738|ref|ZP_00995592.1| putative translation initiation factor [Janibacter sp. HTCC2649] gi|84383506|gb|EAP99387.1| putative translation initiation factor [Janibacter sp. HTCC2649] Length = 289 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y A EARK Q +T IKE+K+RP I Sbjct: 20 LRLAAEADLDLVEVAPMAKPPVAKLMDFGKYKYEAAMKAREARKNQVNTVIKEIKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL G KVK+++ FRGRE +LG LL + E E+ ++ P Sbjct: 80 DPHDYATKKGHVVRFLGGGDKVKVTIMFRGREQSRPELGYRLLQKLAEDVIELGTVESAP 139 Query: 121 KFEGRQMIMILSS 133 K +GR MIM+L+ Sbjct: 140 KQDGRNMIMVLAP 152 >gi|92115709|ref|YP_575438.1| translation initiation factor IF-3 [Nitrobacter hamburgensis X14] gi|91798603|gb|ABE60978.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter hamburgensis X14] Length = 171 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMDAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQD+G +LL +K ++++ + Sbjct: 98 DDHDYNVKMKAMQRFFEEGDKVKITLRYRGREMAHQDIGTKLLDKVKTDVAAYAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|297182028|gb|ADI18203.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0200_39N20] Length = 144 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A+LDLVE+ P VC+++D K +Y K + AR+ QK +KEVKM+P I Sbjct: 7 LEMAESADLDLVEVSPKAKPPVCRLMDYGKFKYQQSKRSHVARQNQKIIHLKEVKMKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ ++ Sbjct: 67 EEHDFQFKLRNALRFLEDGDKVKVGVRFMGRQIAHKDLGIELLEKFQAEIGDGGTVEQPI 126 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 127 TSEGRSMHMILAP 139 >gi|291547119|emb|CBL20227.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus sp. SR1/5] Length = 164 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M AQEA LDLV+I P VCKI+D K RY + + EARKKQK+ +KEV++ P I Sbjct: 30 MAKAQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEARKKQKTIDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL+ K+ A FL G +VK++++FRGRE+ H R +L + + +I+ ++ P Sbjct: 90 DTNDLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMSSSRHVLDDFADLLSDIATVEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 150 KVEGRSMTMFLTEK 163 >gi|75674268|ref|YP_316689.1| translation initiation factor IF-3 [Nitrobacter winogradskyi Nb-255] gi|74419138|gb|ABA03337.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter winogradskyi Nb-255] Length = 171 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMEAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 98 DDHDYNVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKADVSAYAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|92113923|ref|YP_573851.1| translation initiation factor 3 [Chromohalobacter salexigens DSM 3043] gi|91797013|gb|ABE59152.1| bacterial translation initiation factor 3 (bIF-3) [Chromohalobacter salexigens DSM 3043] Length = 163 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLV+I + P VCKI+D K + +K +KK K +KEVK RP Sbjct: 29 LERAEAEGLDLVQIS-NADPIVCKIMDYGKFLFEQKKQRSAQKKKTKQIQVKEVKFRPGT 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKLK + FL G K K++++FRGRE+ HQD+GR+L+ I +++ ++ P Sbjct: 88 DEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEDMATVESFP 147 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIMIL+ K Sbjct: 148 KMEGRQMIMILAPKK 162 >gi|311740496|ref|ZP_07714323.1| translation initiation factor IF3 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304016|gb|EFQ80092.1| translation initiation factor IF3 [Corynebacterium pseudogenitalium ATCC 33035] Length = 148 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|257784327|ref|YP_003179544.1| translation initiation factor IF-3 [Atopobium parvulum DSM 20469] gi|257472834|gb|ACV50953.1| translation initiation factor IF-3 [Atopobium parvulum DSM 20469] Length = 193 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E LDLVEI + P VCKILD K +Y + A ARK Q +KE+K RP I Sbjct: 40 MKRAREHGLDLVEIAPNAEPPVCKILDYSKFKYEQARKAKAARKNQVKIEVKEMKFRPKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D + K + FL+ G +VKI++ FRGRE+ H + GR +L + E + I+ +P Sbjct: 100 DVGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGRIVLDRLAEDLKPYATIEQKP 159 Query: 121 KFEGRQMIMILSS 133 EGR M M+++ Sbjct: 160 LIEGRNMHMLVAP 172 >gi|325291690|ref|YP_004277554.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3] gi|325059543|gb|ADY63234.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3] Length = 140 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 75/134 (55%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VCKILDL KL+Y+ QK A EARKKQK +KE+KMRP I Sbjct: 7 LKMAEDAGLDLVEISPNAEPPVCKILDLGKLKYSTQKKAAEARKKQKIVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +KE I++++ EP Sbjct: 67 DTHDYDVKMKAMNRFFDEGDKVKVTLKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 127 KLEGRQMMMVLAPK 140 >gi|225351394|ref|ZP_03742417.1| hypothetical protein BIFPSEUDO_02988 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157738|gb|EEG71021.1| hypothetical protein BIFPSEUDO_02988 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 232 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|297182829|gb|ADI18981.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0010_10I05] Length = 186 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQ LDLVE+ P VC+++D K +Y K A+ QK +KEVK+RP I Sbjct: 50 LTRAQSDGLDLVEVSPKADPPVCRLMDYGKFKYQQSKRQHAAKVHQKVIHVKEVKLRPKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDLQ K++ FL DG KVK++V F GRE+ H+DLG L+ + GE ++ Sbjct: 110 EDHDLQFKVRNALRFLEDGDKVKVNVVFMGREMAHKDLGLVLIERFQNMIGENGIVEQPV 169 Query: 121 KFEGRQMIMILSS 133 + EGR M MIL+ Sbjct: 170 RNEGRSMFMILAP 182 >gi|308176900|ref|YP_003916306.1| translation initiation factor IF-3 [Arthrobacter arilaitensis Re117] gi|307744363|emb|CBT75335.1| translation initiation factor IF-3 [Arthrobacter arilaitensis Re117] Length = 216 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E++LDLVE+ S P VCK++D K +Y A EARK Q +T +KEV+ R I Sbjct: 23 LRLALESDLDLVEVAPSAKPPVCKLMDFGKYKYEAAVKAREARKNQTNTVLKEVRFRLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL G KVK ++FRGRE ++G LL E+ I+ P Sbjct: 83 DTHDYETKVGHALRFLGAGDKVKAMIQFRGREQQRPEMGIRLLEKFAADVAEVGIIESSP 142 Query: 121 KFEGRQMIMILSS 133 + +GR M+M++ Sbjct: 143 RIDGRNMVMVVGP 155 >gi|167040677|ref|YP_001663662.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514] gi|289578712|ref|YP_003477339.1| translation initiation factor IF-3 [Thermoanaerobacter italicus Ab9] gi|300914718|ref|ZP_07132034.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561] gi|166854917|gb|ABY93326.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514] gi|289528425|gb|ADD02777.1| translation initiation factor IF-3 [Thermoanaerobacter italicus Ab9] gi|300889653|gb|EFK84799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561] Length = 152 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 19 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 79 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 138 Query: 122 FEGRQMIMILSSKC 135 EGR +IM+L+ + Sbjct: 139 MEGRNLIMVLTPRK 152 >gi|302342264|ref|YP_003806793.1| translation initiation factor IF-3 [Desulfarculus baarsii DSM 2075] gi|301638877|gb|ADK84199.1| translation initiation factor IF-3 [Desulfarculus baarsii DSM 2075] Length = 170 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P VC+++D K +Y K EA+KKQ T +KEVKMRP I Sbjct: 37 LKIAQEAGLDLVEVAPNAAPPVCRVMDYGKYKYEQAKKLQEAKKKQAQTQVKEVKMRPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++ + FL + +VK++V+FRGREI + + G LL+ + E E++ +D P Sbjct: 97 DENDFQVKMRNVQRFLEERNRVKVTVQFRGREIAYAEAGERLLARVAETVQEMASVDAPP 156 Query: 121 KFEGRQMIMILSSK 134 GR M MIL+ K Sbjct: 157 SRMGRLMHMILAPK 170 >gi|125973740|ref|YP_001037650.1| translation initiation factor 3 [Clostridium thermocellum ATCC 27405] gi|256005542|ref|ZP_05430503.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 2360] gi|125713965|gb|ABN52457.1| bacterial translation initiation factor 3 (bIF-3) [Clostridium thermocellum ATCC 27405] gi|255990522|gb|EEU00643.1| translation initiation factor IF-3 [Clostridium thermocellum DSM 2360] Length = 164 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VC+I+D K + + K EARK QK +KEV++ I+ Sbjct: 31 KIANAKNLDLVKIAPQAVPPVCRIMDYGKYMFELAKKEKEARKNQKVINVKEVRLSASIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL+DG KVK+SVKFRGRE+ + LG+++L E +++ ++ +PK Sbjct: 91 EHDFNFKLKNALRFLKDGDKVKVSVKFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPK 150 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 151 LEGRNMFMILNPK 163 >gi|163795475|ref|ZP_02189442.1| Initiation factor 3 [alpha proteobacterium BAL199] gi|159179461|gb|EDP63992.1| Initiation factor 3 [alpha proteobacterium BAL199] Length = 144 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 96/134 (71%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ + P VCKILD K +Y QK EA+KKQK +KE+KMRP I Sbjct: 11 LAQAEQFGLDLVEVSPNADPPVCKILDFGKFKYEAQKKKNEAKKKQKVIEVKEIKMRPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+++++ FL DG KVK++++FRGRE+ HQ++G +L +++ GE+++I+ P Sbjct: 71 DDHDYQTKMRSVNRFLEDGDKVKLTMRFRGREMAHQEIGLNVLKRVQDDLGELAKIEAHP 130 Query: 121 KFEGRQMIMILSSK 134 + EGRQM+M+++ + Sbjct: 131 RLEGRQMVMVVAPR 144 >gi|71908289|ref|YP_285876.1| translation initiation factor 3 [Dechloromonas aromatica RCB] gi|71847910|gb|AAZ47406.1| bacterial translation initiation factor 3 (bIF-3) [Dechloromonas aromatica RCB] Length = 137 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 86/131 (65%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVEI + P VC+I+D K +Y QK A EA+ KQK +KE+K+RP D Sbjct: 1 MAEEAGVDLVEIAPTAKPPVCRIMDYGKFKYQEQKRAHEAKLKQKQVQVKEIKLRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D Q+KL+ + FL +G KVK++++FRGRE+ HQ+ G L IK + ++ PK Sbjct: 61 NDYQIKLRNMTRFLEEGDKVKVTLRFRGREMAHQEFGMRQLERIKADLDAVGAVEQMPKM 120 Query: 123 EGRQMIMILSS 133 EGRQMIMI+ Sbjct: 121 EGRQMIMIIGP 131 >gi|17232115|ref|NP_488663.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] gi|17133760|dbj|BAB76322.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] Length = 204 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 70 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + + P Sbjct: 130 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAP 189 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 190 KKEGRNMMMLISPKK 204 >gi|317487454|ref|ZP_07946241.1| translation initiation factor IF-3 [Bilophila wadsworthia 3_1_6] gi|316921313|gb|EFV42612.1| translation initiation factor IF-3 [Bilophila wadsworthia 3_1_6] Length = 178 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVE+ ++ P VC+++D K +Y QK EA+K+Q IKE+K+RP Sbjct: 31 IAMAKEHGLDLVEVAATADPPVCRVMDYGKFKYETQKKKQEAKKRQTVVQIKEIKVRPKT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ I FL DG +VK++V FRGREI+H+D G +L + ++ +++ EP Sbjct: 91 DDHDFETKVRHIKRFLEDGDRVKVTVFFRGREIVHKDRGLSILERVIADTKDVGKVEQEP 150 Query: 121 KFEGRQMIMILSS 133 + EGR + M+L+ Sbjct: 151 RAEGRTLQMLLTP 163 >gi|34496804|ref|NP_901019.1| translation initiation factor IF-3 [Chromobacterium violaceum ATCC 12472] gi|34102659|gb|AAQ59024.1| translation initiation factor IF-3 [Chromobacterium violaceum ATCC 12472] Length = 153 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+E ++DLVEI + P VCK++D K +Y K EA++KQK IKE+K RP Sbjct: 18 MALAEENDVDLVEISPTAQPPVCKLMDYGKYKYEQSKKRHEAKQKQKQVQIKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL +G K K++++FRGRE+ HQD+G LL ++ E+ ++ P Sbjct: 78 DDGDYNVKLRNLVRFLTEGDKAKVTLRFRGREMAHQDIGLALLKRVEADLAEVGTVEQFP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPKK 152 >gi|50121349|ref|YP_050516.1| translation initiation factor IF-3 [Pectobacterium atrosepticum SCRI1043] gi|261821452|ref|YP_003259558.1| translation initiation factor IF-3 [Pectobacterium wasabiae WPP163] gi|61213102|sp|Q6D4G9|IF3_ERWCT RecName: Full=Translation initiation factor IF-3 gi|49611875|emb|CAG75324.1| translation initiation factor IF-3 [Pectobacterium atrosepticum SCRI1043] gi|261605465|gb|ACX87951.1| translation initiation factor IF-3 [Pectobacterium wasabiae WPP163] Length = 180 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|237796593|ref|YP_002864145.1| translation initiation factor IF-3 [Clostridium botulinum Ba4 str. 657] gi|229260890|gb|ACQ51923.1| translation initiation factor IF-3 [Clostridium botulinum Ba4 str. 657] Length = 184 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGVMEKAPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPRKA 184 >gi|171742545|ref|ZP_02918352.1| hypothetical protein BIFDEN_01658 [Bifidobacterium dentium ATCC 27678] gi|171278159|gb|EDT45820.1| hypothetical protein BIFDEN_01658 [Bifidobacterium dentium ATCC 27678] Length = 232 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|253688276|ref|YP_003017466.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259491511|sp|C6DFY7|IF3_PECCP RecName: Full=Translation initiation factor IF-3 gi|251754854|gb|ACT12930.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 180 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|256751282|ref|ZP_05492162.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus CCSD1] gi|256749837|gb|EEU62861.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus CCSD1] Length = 141 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQE +LDLV+I P VCK++D K RY + K EA+KKQK +KE++M P I+ Sbjct: 8 KIAQERHLDLVKIAPQANPPVCKLMDFGKYRYELSKREKEAKKKQKVINVKEIRMSPNIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VKL++ FL++G KVK++++FRGRE +H L +LL E E I+ P Sbjct: 68 DHDFGVKLRSAIKFLKEGDKVKVTIRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPN 127 Query: 122 FEGRQMIMILSSKC 135 EGR +IM+L+ + Sbjct: 128 MEGRNLIMVLTPRK 141 >gi|154488867|ref|ZP_02029716.1| hypothetical protein BIFADO_02175 [Bifidobacterium adolescentis L2-32] gi|154083004|gb|EDN82049.1| hypothetical protein BIFADO_02175 [Bifidobacterium adolescentis L2-32] Length = 232 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFDVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|227501816|ref|ZP_03931865.1| translation initiation factor IF-3 [Corynebacterium accolens ATCC 49725] gi|306835994|ref|ZP_07468986.1| translation initiation factor IF3 [Corynebacterium accolens ATCC 49726] gi|227077841|gb|EEI15804.1| translation initiation factor IF-3 [Corynebacterium accolens ATCC 49725] gi|304568160|gb|EFM43733.1| translation initiation factor IF3 [Corynebacterium accolens ATCC 49726] Length = 148 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ P V KI+D K +Y + A E+RK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPKAKPPVAKIMDYGKFKYEQAQKARESRKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + + E+ ++ PK Sbjct: 71 DHDYETKKSNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLADDVAEVGVVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|227824121|ref|YP_002828094.1| translation initiation factor IF-3 [Sinorhizobium fredii NGR234] gi|227343123|gb|ACP27341.1| predicted translation initiation factor IF-3 [Sinorhizobium fredii NGR234] Length = 143 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 76/134 (56%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E+ LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP I Sbjct: 10 LRMAEESGLDLVEIAPNSEPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK+KA++ F DG KVK+++KFRGRE+ HQ+LG +LL +K+ I++++ EP Sbjct: 70 DTHDYEVKMKAMNRFFEDGDKVKVTLKFRGREMAHQELGMKLLLQVKDDTQAIAKVEAEP 129 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 130 KLEGRQMMMVLAPK 143 >gi|297571534|ref|YP_003697308.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum DSM 20595] gi|296931881|gb|ADH92689.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum DSM 20595] Length = 202 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEANLDLVE+ + P V K++D K +Y + A E+R+ Q +T +KE+++ I Sbjct: 23 LRLAQEANLDLVEVAPNANPPVAKLMDYGKFKYEAAQKARESRRNQANTQLKEMRLGLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK I FL G KVK+ ++FRGRE ++G L+ + E + ++ P Sbjct: 83 DQHDYETKLKRIIKFLNGGDKVKVQLRFRGREQSRPEVGVRLMERLAADTAEDAVVESAP 142 Query: 121 KFEGRQMIMILSS 133 + +GR M+M+L+ Sbjct: 143 RVDGRSMVMVLAP 155 >gi|15887604|ref|NP_353285.1| translation initiation factor IF-3 [Agrobacterium tumefaciens str. C58] gi|15155147|gb|AAK86070.1| translation initiation factor 3 [Agrobacterium tumefaciens str. C58] Length = 140 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 75/134 (55%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVEI + P VCKILDL KL+Y+ QK A EARKKQK +KE+KMRP I Sbjct: 7 LKMAEEAGLDLVEISPNAEPPVCKILDLGKLKYSTQKKAAEARKKQKIVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +KE I++++ EP Sbjct: 67 DTHDYDVKMKAMNRFFDEGDKVKVTLKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 127 KLEGRQMMMVLAPR 140 >gi|319794590|ref|YP_004156230.1| translation initiation factor if-3 [Variovorax paradoxus EPS] gi|315597053|gb|ADU38119.1| translation initiation factor IF-3 [Variovorax paradoxus EPS] Length = 182 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVE+ ++ P VC++++ K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEVVAAANPPVCRLIEYGKFKYHEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQ+LG LL I++ G+ ++ P Sbjct: 84 DDGDYNIKMRNIKRFLEEGDKCKITLRFRGREITHQELGLALLQRIRDELGDTIMVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|306822458|ref|ZP_07455836.1| translation initiation factor IF3 [Bifidobacterium dentium ATCC 27679] gi|304554003|gb|EFM41912.1| translation initiation factor IF3 [Bifidobacterium dentium ATCC 27679] Length = 232 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|227505046|ref|ZP_03935095.1| translation initiation factor IF-3 [Corynebacterium striatum ATCC 6940] gi|227198410|gb|EEI78458.1| translation initiation factor IF-3 [Corynebacterium striatum ATCC 6940] Length = 148 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 77/132 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA+LDLVE+ + P V KI+D K +Y + A EARK Q+ T +KE K RP ID Sbjct: 11 KLAYEADLDLVEVAPNAKPPVAKIMDHGKFKYEQAQKAREARKNQQQTVVKEQKFRPKID 70 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K + FL G KVK+++ FRGRE +LG LL + E E ++ PK Sbjct: 71 DHDYETKKGNVVRFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAEDVAEYGIVESRPK 130 Query: 122 FEGRQMIMILSS 133 +GR M M+L Sbjct: 131 QDGRNMTMVLGP 142 >gi|239814877|ref|YP_002943787.1| translation initiation factor IF-3 [Variovorax paradoxus S110] gi|239801454|gb|ACS18521.1| translation initiation factor IF-3 [Variovorax paradoxus S110] Length = 181 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 58/132 (43%), Positives = 91/132 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVE+ ++ P VC++++ K +Y QK A EA+ KQK +KE+K RP Sbjct: 24 LRLAGEADVDLVEVVAAANPPVCRLIEYGKFKYHEQKKAAEAKSKQKVIEVKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQ+LG LL I++ G++ ++ P Sbjct: 84 DDGDYNIKMRNIKRFLEEGDKCKITLRFRGREITHQELGLALLQRIRDELGDLIVVEQFP 143 Query: 121 KFEGRQMIMILS 132 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIA 155 >gi|168039904|ref|XP_001772436.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676233|gb|EDQ62718.1| predicted protein [Physcomitrella patens subsp. patens] Length = 421 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 7/143 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKK--QKSTGIKEVKMRP 58 +Q A+ A+LDLV I P VC+I+D K RY QK EA+KK +KE+K+R Sbjct: 226 LQRARNADLDLVAISLDADPPVCRIMDYSKFRYEAQKKKREAQKKALASRQDLKELKIRY 285 Query: 59 VIDLHDLQVKLKAIDGFLRDGCK-----VKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 ID+HD V+L++ FL+DG K VK+ +F+GRE+ +DL +L + GE+ Sbjct: 286 NIDVHDYDVRLRSAKKFLKDGDKVDICHVKVVCQFKGREMDFKDLAFKLFQRFIDDVGEL 345 Query: 114 SRIDCEPKFEGRQMIMILSSKCV 136 I+ +P EGRQMIM+L Sbjct: 346 GLIESKPAIEGRQMIMMLGPNKA 368 >gi|326402655|ref|YP_004282736.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301] gi|325049516|dbj|BAJ79854.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301] Length = 156 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 91/133 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A E LDLVEI + P VCK+LD K +Y QK EARKKQK IKE+K+RP ID Sbjct: 24 RRAGEVGLDLVEISPNADPPVCKLLDYGKFKYEQQKKKNEARKKQKVIEIKEIKVRPNID 83 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+A+ F+ DG KVK++++FRGRE+ HQ+LG ++L I+ ++++ PK Sbjct: 84 ENDYQVKLRAMKSFIGDGDKVKVTLRFRGREMAHQELGVKVLERIRLDMETDTKVEQMPK 143 Query: 122 FEGRQMIMILSSK 134 E RQMIM+LS + Sbjct: 144 MENRQMIMVLSPR 156 >gi|315655516|ref|ZP_07908415.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333] gi|315490171|gb|EFU79797.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333] Length = 367 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 76/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ ID Sbjct: 50 LADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKIDS 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P+ Sbjct: 110 HDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQ 169 Query: 123 EGRQMIMILSS 133 +GR M M++ Sbjct: 170 DGRSMTMVIGP 180 >gi|301629969|ref|XP_002944104.1| PREDICTED: threonyl-tRNA synthetase-like [Xenopus (Silurana) tropicalis] Length = 841 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 687 LRMAGDMDVDLVEIAATASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 746 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LLS I++ ++ ++ P Sbjct: 747 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLSRIRDDLADLIVVEQFP 806 Query: 121 KFEGRQMIMILSS 133 K EG+QMIM+++ Sbjct: 807 KLEGKQMIMMIAP 819 >gi|212715579|ref|ZP_03323707.1| hypothetical protein BIFCAT_00478 [Bifidobacterium catenulatum DSM 16992] gi|212660946|gb|EEB21521.1| hypothetical protein BIFCAT_00478 [Bifidobacterium catenulatum DSM 16992] Length = 232 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + E ++ P Sbjct: 101 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAGEVEEYGTVEFAP 160 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 161 KQEGRNIIMTLAPK 174 >gi|323490462|ref|ZP_08095669.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2] gi|323395866|gb|EGA88705.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2] Length = 157 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A NLDLV + P V +I+D K ++ QK E RK QK +KEV++ P I Sbjct: 20 LEIAARVNLDLVLVAPQAKPPVARIMDHGKFKFEQQKKDREIRKNQKVIVVKEVRLSPSI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ FL G KVK S++F+GR I H+++G+ +L E E++ ++ P Sbjct: 80 DDHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLERFAEACKEVATVEQRP 139 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 140 KMDGRSMFLMLAP 152 >gi|296437320|gb|ADH19490.1| translation initiation factor IF-3 [Chlamydia trachomatis G/11222] gi|297748962|gb|ADI51508.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Chlamydia trachomatis D-EC] gi|297749842|gb|ADI52520.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Chlamydia trachomatis D-LC] Length = 198 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 58 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 118 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 177 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 178 KLNGRSLICVIAPGTL 193 >gi|108804140|ref|YP_644077.1| translation initiation factor 3 [Rubrobacter xylanophilus DSM 9941] gi|108765383|gb|ABG04265.1| bacterial translation initiation factor 3 (bIF-3) [Rubrobacter xylanophilus DSM 9941] Length = 175 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+ +LDLVE+ + P V +++D K +Y ++ ARKKQ + ++E+K+RP I Sbjct: 20 MDIAERQDLDLVEVAPNANPPVVRLMDYGKYKYQKEQARKAARKKQVNINVREIKLRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + K ++ FLR G KVK+++ FRGRE+ H +LG LL + + ++ RI+ +P Sbjct: 80 GDHDFETKKGHVERFLRGGDKVKVTIMFRGREVQHPELGERLLRRLADDLSDLGRIENQP 139 Query: 121 KFEGRQMIMILSSKC 135 K +GR M+M+L+ + Sbjct: 140 KLDGRNMVMVLAPRK 154 >gi|311115050|ref|YP_003986271.1| translation initiation factor IF3 [Gardnerella vaginalis ATCC 14019] gi|310946544|gb|ADP39248.1| translation initiation factor IF3 [Gardnerella vaginalis ATCC 14019] Length = 244 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 48 LNLAKEANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E I+ P Sbjct: 108 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPIGGVELLRRLADEVSESGTIEFAP 167 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 168 KQEGRNIIMTLAPK 181 >gi|319898238|ref|YP_004158331.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73] gi|319402202|emb|CBI75733.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73] Length = 164 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 74/134 (55%), Positives = 100/134 (74%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI + P VCKI+DL KL+Y QK A E RKKQK IKE+KMRP + Sbjct: 31 LARAADIGLDLVEIVPNAEPPVCKIVDLGKLKYQNQKKAAETRKKQKIIEIKEIKMRPNV 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD +VKL+AI F+ +G KVKI+++FRGRE+ HQDLG +LL +KE EI++I+ EP Sbjct: 91 DVHDYEVKLRAIRRFIDNGDKVKITLRFRGREMTHQDLGIKLLQRVKENTNEIAKIESEP 150 Query: 121 KFEGRQMIMILSSK 134 KFEGRQ++M+++ K Sbjct: 151 KFEGRQIMMVIAPK 164 >gi|320449907|ref|YP_004202003.1| translation initiation factor IF-3 [Thermus scotoductus SA-01] gi|320150076|gb|ADW21454.1| translation initiation factor IF-3 [Thermus scotoductus SA-01] Length = 157 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 20 LRLAQEQDLDLVLVGPTADPPVARIMDYSKWRYEQQVAEKEARKKAKRTEVKSIKFRVKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL +G KVK+++ FRGRE+ H +LG LL + E ++ ++ +P Sbjct: 80 DDHDYQTKLNHIKRFLAEGHKVKVTIMFRGREMSHPELGERLLERVAEDLKGLAVVEMKP 139 Query: 121 KFEGRQMIMILSSKCV 136 + GR M M+L+ V Sbjct: 140 ELLGRDMNMLLAPAKV 155 >gi|229829199|ref|ZP_04455268.1| hypothetical protein GCWU000342_01286 [Shuttleworthia satelles DSM 14600] gi|229792362|gb|EEP28476.1| hypothetical protein GCWU000342_01286 [Shuttleworthia satelles DSM 14600] Length = 191 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 83/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV++ P VCKI+D K RY + + A EA++KQK +KE++M P ID Sbjct: 57 KLADEAKLDLVKVAPQAKPPVCKIIDYGKYRYEMARKAKEAKRKQKQIELKEIRMSPNID 116 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K KA FL G KVKI+++FRGRE+ H R +L E +I+ +D PK Sbjct: 117 SNDLMTKTKAARKFLEKGNKVKITLRFRGREMAHVSASRHILEEFAESLEDIASVDKAPK 176 Query: 122 FEGRQMIMILSSKC 135 EGR M ++L+ K Sbjct: 177 MEGRSMSLVLAVKK 190 >gi|462400|sp|P33320|IF3_SERMA RecName: Full=Translation initiation factor IF-3 gi|152835|gb|AAC36813.1| translation initiation factor IF3 [Serratia marcescens] Length = 183 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 89/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +++QK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKEEQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL DG K KI+++FRG E+ HQ +G E+L+ +++ +++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGPEMAHQQIGMEVLNPLRKDLCEDMDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPKK 181 >gi|297565682|ref|YP_003684654.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946] gi|296850131|gb|ADH63146.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946] Length = 174 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE DLV + + P V ++LD K RY Q+ EARKK K T +K +K RP I Sbjct: 34 LRMAQEREYDLVLVSPNAVPPVARLLDYGKWRYEQQQAEKEARKKAKRTEVKSIKFRPKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL + FL +G KVKI++ FRGRE+ H +LG +L G + ++ +P Sbjct: 94 DEHDYQTKLGHVRRFLEEGHKVKITIMFRGREMAHPELGSRILERAVADLGPAAVVELKP 153 Query: 121 KFEGRQMIMILSS 133 + GR M M+++ Sbjct: 154 EMAGRDMNMVIAP 166 >gi|328541818|ref|YP_004301927.1| translation initiation factor IF-3 [polymorphum gilvum SL003B-26A1] gi|326411570|gb|ADZ68633.1| Predicted translation initiation factor IF-3 [Polymorphum gilvum SL003B-26A1] Length = 132 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 67/128 (52%), Positives = 95/128 (74%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EA LDLVEI + P VCKILD + +Y QK A EARKKQK+ IKE+KMRP ID+HD Sbjct: 2 EAGLDLVEIQPNAEPPVCKILDYGRFKYQSQKKAAEARKKQKTVEIKEIKMRPNIDIHDY 61 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +VK+K++ F +G KVK++++FRGRE+ HQDLG +LL +++ EI++++ P+ EGR Sbjct: 62 EVKMKSMLRFFSEGDKVKVTLRFRGREMAHQDLGMKLLMKVRDETAEIAKVESAPRLEGR 121 Query: 126 QMIMILSS 133 QM+M+L+ Sbjct: 122 QMVMVLAP 129 >gi|332981194|ref|YP_004462635.1| translation initiation factor 3 (bIF-3) [Mahella australiensis 50-1 BON] gi|332698872|gb|AEE95813.1| bacterial translation initiation factor 3 (bIF-3) [Mahella australiensis 50-1 BON] Length = 167 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV + TP VC+I+D K +Y K EA+K Q+ IKE+++ I Sbjct: 30 LELAQRKQLDLVNVAPQATPPVCRIMDYGKYKYEAIKQEKEAKKNQRIIDIKEIRLSTTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ VK+K FL++G KVK++V+FRGR+I H D+ E+L N E+ E+ I+ P Sbjct: 90 EEHDIDVKIKNAIKFLKNGDKVKVTVRFRGRQITHPDIAAEILKNFAEKVAEVGTIEKAP 149 Query: 121 KFEGRQMIMILSSKC 135 + +GR M+MIL+ K Sbjct: 150 QMDGRNMLMILTPKA 164 >gi|229817383|ref|ZP_04447665.1| hypothetical protein BIFANG_02645 [Bifidobacterium angulatum DSM 20098] gi|229785172|gb|EEP21286.1| hypothetical protein BIFANG_02645 [Bifidobacterium angulatum DSM 20098] Length = 257 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + +KE++ R I Sbjct: 57 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKYKYNEKIKAREARRNQNTAEVKEIRFRLKI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + E I+ +P Sbjct: 117 DDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAAEVEEYGTIESQP 176 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM+L+ K Sbjct: 177 KQEGRNIIMVLAPK 190 >gi|149919497|ref|ZP_01907977.1| translation initiation factor IF-3 [Plesiocystis pacifica SIR-1] gi|149819622|gb|EDM79049.1| translation initiation factor IF-3 [Plesiocystis pacifica SIR-1] Length = 217 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E +L+LVE++ +P VCKI+D K +Y K +A+K +KS +KEVK RP Sbjct: 18 MRRADEQSLELVEVNPKASPPVCKIMDYGKFKYENAKRERDAKKNKKSQELKEVKFRPKT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD K+K FL D KV++ V+FRGRE++H + GR++L+ + + +++ + P Sbjct: 78 HDHDFTFKVKHARRFLEDNNKVRLLVQFRGREVVHPETGRDVLNRVIKEVMDLATVIQVP 137 Query: 121 KFEGRQMIMILSSKC 135 EG +M MIL+ K Sbjct: 138 SMEGNRMSMILAPKA 152 >gi|119897371|ref|YP_932584.1| translation initiation factor IF-3 [Azoarcus sp. BH72] gi|119669784|emb|CAL93697.1| translation initiation factor IF-3 [Azoarcus sp. BH72] Length = 156 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 83/128 (64%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI P VCKI+D K +Y QK A EAR KQK +KEVK+RP D +D Q+ Sbjct: 27 GLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGTDENDYQI 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ+ G L IK E+ +++ PK EGRQM Sbjct: 87 KLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERIKADLEELGQVEQMPKMEGRQM 146 Query: 128 IMILSSKC 135 IM+++ K Sbjct: 147 IMVIAPKK 154 >gi|145589015|ref|YP_001155612.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047421|gb|ABP34048.1| bacterial translation initiation factor 3 (bIF-3) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 169 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P V +I+D K +Y K EA+ KQK +KEVK RP Sbjct: 32 LALAEEKETDLVEIAPTAVPPVVRIMDFGKFKYQEAKRMHEAKLKQKVIQVKEVKFRPGT 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D VKL+ + FL DG K KI+++FRGRE+ HQ++G +L +K E +++ P Sbjct: 92 DDGDYGVKLRNLIRFLEDGDKTKITLRFRGREMAHQEIGVRMLERLKLDLVEYGQVEQFP 151 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+L+ Sbjct: 152 KMEGRQMVMVLAP 164 >gi|256830759|ref|YP_003159487.1| translation initiation factor IF-3 [Desulfomicrobium baculatum DSM 4028] gi|256579935|gb|ACU91071.1| translation initiation factor IF-3 [Desulfomicrobium baculatum DSM 4028] Length = 173 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + P VCKI+D K Y +K + EA+K+Q +KE+K RP Sbjct: 37 LEQAEAKGLDLVEVAPNAKPPVCKIMDYGKYLYEEKKKSQEAKKRQTQIQVKEIKFRPHT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K I F+ DG + K++V FRGRE+ H+D G+ +L I E ++++++ Sbjct: 97 DDHDLMTKIKHIRRFIEDGDRCKVTVFFRGREMAHKDRGQVILDRIVEMVSDVAKVEQTS 156 Query: 121 KFEGRQMIMILS--SKC 135 + EGR M ++L+ K Sbjct: 157 RVEGRTMFLLLAGLPKK 173 >gi|222151592|ref|YP_002560748.1| translation initiation factor IF-3 [Macrococcus caseolyticus JCSC5402] gi|254803489|sp|B9E784|IF3_MACCJ RecName: Full=Translation initiation factor IF-3 gi|222120717|dbj|BAH18052.1| translation initiation factor IF-3 [Macrococcus caseolyticus JCSC5402] Length = 178 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ NLD+V + + P V KI+D K ++ QK EARKKQK +KE+++ P I Sbjct: 39 IEIAERVNLDVVLVAPNAKPPVAKIMDYGKFKFEQQKKEKEARKKQKVVTVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL KVK+S++FRGR I H++ G+ +L E +++ ++ +P Sbjct: 99 EDHDFNTKLKNARKFLEKEDKVKVSIRFRGRAITHKEFGQRVLEKFAEECKDLATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L+ Sbjct: 159 KMDGRSMFLMLAP 171 >gi|21243324|ref|NP_642906.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv. citri str. 306] gi|78048350|ref|YP_364525.1| translation initiation factor IF-3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|21108866|gb|AAM37442.1| initiation factor IF-3 [Xanthomonas axonopodis pv. citri str. 306] gi|78036780|emb|CAJ24473.1| Initiation factor IF-3 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 159 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRP 142 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 143 RLEGRQMVMMIAPKK 157 >gi|170760643|ref|YP_001788456.1| translation initiation factor IF-3 [Clostridium botulinum A3 str. Loch Maree] gi|169407632|gb|ACA56043.1| translation initiation factor IF-3 [Clostridium botulinum A3 str. Loch Maree] Length = 184 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPRKA 184 >gi|328953979|ref|YP_004371313.1| Translation initiation factor IF-3 [Desulfobacca acetoxidans DSM 11109] gi|328454303|gb|AEB10132.1| Translation initiation factor IF-3 [Desulfobacca acetoxidans DSM 11109] Length = 159 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/125 (44%), Positives = 74/125 (59%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVE+ P VC+I+D K +Y K EARKKQ +KEVK RP I+ HD+ K+ Sbjct: 35 DLVEVAPQANPPVCRIMDYGKFKYLQSKKVQEARKKQTIIQVKEVKFRPKIEEHDVAFKI 94 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 K I FL K KIS+ FRGREI H +G +LL+ + +I ++ PK EGR + M Sbjct: 95 KNIRRFLAQKDKTKISLIFRGREIAHPQIGIDLLNRVATELEDIGTVEQPPKIEGRNLTM 154 Query: 130 ILSSK 134 I++ K Sbjct: 155 IIAPK 159 >gi|255527630|ref|ZP_05394491.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296185308|ref|ZP_06853718.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|255508672|gb|EET85051.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296050142|gb|EFG89566.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] Length = 150 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLV I + P VC+I+D K Y K EA+K QK IKE+++RP I Sbjct: 16 LNRARDEGLDLVMISPTAKPPVCRIMDYNKFLYEQSKKEKEAKKNQKVVDIKEIRLRPNI 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+Q+K FL KVK+S++FRGRE + L ++ + + + I+ P Sbjct: 76 EEHDIQIKANNAKKFLSSDNKVKVSIRFRGRENNYTHLASKVFDVFISKLEDTAVIEKSP 135 Query: 121 KFEGRQMIMILSSKC 135 K EG MIMIL+ K Sbjct: 136 KLEGNNMIMILAPKK 150 >gi|153933561|ref|YP_001385459.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 19397] gi|153934650|ref|YP_001388866.1| translation initiation factor IF-3 [Clostridium botulinum A str. Hall] gi|182701650|ref|ZP_02613878.2| translation initiation factor IF-3 [Clostridium botulinum NCTC 2916] gi|226950567|ref|YP_002805658.1| translation initiation factor IF-3 [Clostridium botulinum A2 str. Kyoto] gi|152929605|gb|ABS35105.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 19397] gi|152930564|gb|ABS36063.1| translation initiation factor IF-3 [Clostridium botulinum A str. Hall] gi|182670018|gb|EDT81994.1| translation initiation factor IF-3 [Clostridium botulinum NCTC 2916] gi|226843624|gb|ACO86290.1| translation initiation factor IF-3 [Clostridium botulinum A2 str. Kyoto] Length = 184 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 81/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+S ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELSVMEKAPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPRKA 184 >gi|190575250|ref|YP_001973095.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia K279a] gi|190013172|emb|CAQ46805.1| putative translation initiation factor IF-3 [Stenotrophomonas maltophilia K279a] Length = 180 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 44 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKASEAKKKTKQVEIKEVKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + GFL DG K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 104 DEGDYQIKLRKMRGFLEDGDKIKVNIRFRGREMSHQELGREMANRIETDLGEDIVIESRP 163 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 164 RLEGRQMVMMIAPKK 178 >gi|194366577|ref|YP_002029187.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia R551-3] gi|194349381|gb|ACF52504.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia R551-3] Length = 180 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 44 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKASEAKKKTKQVEIKEVKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + GFL +G K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 104 DEGDYQIKLRKMRGFLEEGDKIKVNIRFRGREMSHQELGREMANRIETDLGEDIVIESRP 163 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 164 RLEGRQMVMMIAPKK 178 >gi|58582809|ref|YP_201825.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624683|ref|YP_452055.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711589|ref|ZP_02242796.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188577598|ref|YP_001914527.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427403|gb|AAW76440.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368623|dbj|BAE69781.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522050|gb|ACD59995.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 159 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDEIVIESRP 142 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 143 RLEGRQMVMMIAPKK 157 >gi|298346970|ref|YP_003719657.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063] gi|298237031|gb|ADI68163.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063] Length = 367 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 76/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ ID Sbjct: 50 LADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKIDS 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P+ Sbjct: 110 HDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQ 169 Query: 123 EGRQMIMILSS 133 +GR M M++ Sbjct: 170 DGRSMTMVIGP 180 >gi|261880447|ref|ZP_06006874.1| initiation factor IF3 [Prevotella bergensis DSM 17361] gi|270332870|gb|EFA43656.1| initiation factor IF3 [Prevotella bergensis DSM 17361] Length = 228 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+I+D K Y +K E ++KQ +KE++ P Sbjct: 38 LDLARQQGMDLVEISPNAQPPVCRIIDYSKFLYQQKKRQKEMKQKQVKVDVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL FL++G KV+ V FRGR I+ ++ G LL E ++++ P Sbjct: 98 DDHDYNFKLNHAKQFLKEGNKVRAYVFFRGRSILFKEQGELLLLRFANDLEEYAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKRMFLFLAPKKV 173 >gi|289661761|ref|ZP_06483342.1| translation initiation factor IF-3 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668712|ref|ZP_06489787.1| translation initiation factor IF-3 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 159 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAKADEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRP 142 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 143 RLEGRQMVMMIAPKK 157 >gi|310827809|ref|YP_003960166.1| hypothetical protein ELI_2220 [Eubacterium limosum KIST612] gi|308739543|gb|ADO37203.1| hypothetical protein ELI_2220 [Eubacterium limosum KIST612] Length = 195 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLV++ + P VCKILD K RY + EA+K QK+ IKE++M ++ Sbjct: 60 KLADEKSLDLVKVSPNAKPPVCKILDYGKFRYEEMRRVKEAKKNQKAVVIKEIRMSVRVE 119 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ VK+K FL G +VK+S++FRGRE+ + D GR +L + ER + +D PK Sbjct: 120 EHDIMVKIKNCIKFLEQGNRVKVSIRFRGREMAYTDQGRGVLLDFAERVTDYGTVDKPPK 179 Query: 122 FEGRQMIMILSSKC 135 EGR M+M LS K Sbjct: 180 MEGRSMVMFLSPKK 193 >gi|317153729|ref|YP_004121777.1| translation initiation factor IF-3 [Desulfovibrio aespoeensis Aspo-2] gi|316943980|gb|ADU63031.1| translation initiation factor IF-3 [Desulfovibrio aespoeensis Aspo-2] Length = 155 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVE+ + P VCKI+D K +Y QK EA+KKQ IKEVK RP Sbjct: 20 LDRAKEKGLDLVEVAPNADPPVCKIMDYGKFKYQQQKKLQEAKKKQTVIKIKEVKFRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL DG + K++V FRGREI+H+D G ++L + ++++++ P Sbjct: 80 DEHDYQTKLNKILQFLDDGDRCKVTVFFRGREIVHKDRGLKMLERVVTDTVDVAKVESRP 139 Query: 121 KFEGRQMIMILSS 133 EGR M M+L+ Sbjct: 140 MSEGRTMTMMLAP 152 >gi|289450192|ref|YP_003475581.1| translation initiation factor IF-3 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184739|gb|ADC91164.1| translation initiation factor IF-3 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 195 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA+LDLV I + VC+++D K ++ K EA++ QK +KEV ++ Sbjct: 60 LRQAEEADLDLVLISPNPDNPVCRVMDYGKYQFEQAKREKEAKRNQKVVEVKEVGLKLTT 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL KLK + FLRDG +VKIS++FRGRE+ + G E+++++ ++ E++++D P Sbjct: 120 EEHDLGFKLKNAEKFLRDGNRVKISIRFRGREMAYTQQGYEVMNSVSDKLAEVAQVDRAP 179 Query: 121 KFEGRQMIMILSSKC 135 + EGR MIM L + Sbjct: 180 RVEGRNMIMFLMPRK 194 >gi|90421865|ref|YP_530235.1| initiation factor 3 [Rhodopseudomonas palustris BisB18] gi|90103879|gb|ABD85916.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisB18] Length = 132 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 64/132 (48%), Positives = 97/132 (73%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+ID Sbjct: 1 MAAEAGMDLVEISPNTNPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMIDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK++A+ F +G KVKI++++RGRE+ HQ++G +LL +K E ++++ + +F Sbjct: 61 HDYEVKMRAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKNDVAEYAKVEQDARF 120 Query: 123 EGRQMIMILSSK 134 EGRQ++M+L+ + Sbjct: 121 EGRQVVMVLAPR 132 >gi|304389319|ref|ZP_07371284.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656577|ref|ZP_07909464.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327437|gb|EFL94670.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492532|gb|EFU82136.1| translation initiation factor IF3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 367 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 76/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +A LDLVE+ P VCK++D K +Y + A + R+ Q ST +KE+++ ID Sbjct: 50 LADDAGLDLVEVAPDAHPPVCKLMDYGKYKYEAAQKARDQRRNQASTQLKEIRLGLKIDS 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK I FL G KVKI +KFRGRE ++G +LL + E + ++ P+ Sbjct: 110 HDYEVKKGHILRFLNGGDKVKIMIKFRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQ 169 Query: 123 EGRQMIMILSS 133 +GR M M++ Sbjct: 170 DGRSMTMVIGP 180 >gi|312143808|ref|YP_003995254.1| translation initiation factor IF-3 [Halanaerobium sp. 'sapolanicus'] gi|311904459|gb|ADQ14900.1| translation initiation factor IF-3 [Halanaerobium sp. 'sapolanicus'] Length = 189 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E LDLVE+ P VC+I+D K +Y K EA+K Q +KEV+M I Sbjct: 53 LDSAAEQGLDLVEVAPQANPPVCRIMDYGKYKYEQAKKEKEAKKNQNVMNVKEVQMGVKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL + KVK+ ++FRGRE+MH++LG L+ + E+ +I +++ +P Sbjct: 113 EDHDFNVKLKQARRFLNNKDKVKVRIRFRGREMMHKELGYNLMDRLIEQTDDIGKVESKP 172 Query: 121 KFEGRQMIMILSS 133 K EGR M+M L+ Sbjct: 173 KMEGRNMMMFLTP 185 >gi|21231897|ref|NP_637814.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767975|ref|YP_242737.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. 8004] gi|188991101|ref|YP_001903111.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. B100] gi|21113621|gb|AAM41738.1| initiation factor IF-3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573307|gb|AAY48717.1| translation initiation factor IF-3 [Xanthomonas campestris pv. campestris str. 8004] gi|167732861|emb|CAP51055.1| Initiation factor IF-3 [Xanthomonas campestris pv. campestris] Length = 159 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRP 142 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 143 RLEGRQMVMMIAPKK 157 >gi|89054259|ref|YP_509710.1| translation initiation factor IF-3 [Jannaschia sp. CCS1] gi|88863808|gb|ABD54685.1| bacterial translation initiation factor 3 (bIF-3) [Jannaschia sp. CCS1] Length = 221 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 81/122 (66%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VEI + P VCKI+D K +Y QK EARKKQK+ IKEVKMRP D HD K+ Sbjct: 97 VEISPNADPPVCKIMDFGKYKYETQKREAEARKKQKTIDIKEVKMRPGTDDHDFNRKVTD 156 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 FL G KVK++++FRGRE+ HQ+LGRE+L + +R I +I+ P+ EGRQM+M++ Sbjct: 157 AVKFLEGGDKVKVTLRFRGREMAHQNLGREMLEKVVDRIEGIGKIESMPRMEGRQMVMMI 216 Query: 132 SS 133 + Sbjct: 217 NP 218 >gi|298492834|ref|YP_003723011.1| translation initiation factor IF-3 ['Nostoc azollae' 0708] gi|298234752|gb|ADI65888.1| translation initiation factor IF-3 ['Nostoc azollae' 0708] Length = 177 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL ELL + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEELLKRMASDLEPFGEVQQAP 162 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPK 176 >gi|328949634|ref|YP_004366969.1| Translation initiation factor IF-3 [Marinithermus hydrothermalis DSM 14884] gi|328449958|gb|AEB10859.1| Translation initiation factor IF-3 [Marinithermus hydrothermalis DSM 14884] Length = 178 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLV + + +P V ++LD K RY Q+ EARKK K +K +K R I Sbjct: 40 LAIARERDLDLVLVGPNASPPVARLLDYGKWRYEQQQALKEARKKAKRQEMKAIKFRVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL + FL+ G KVK+++ FRGRE+ H +LG+ +L + E +++ ++ +P Sbjct: 100 NEHDYQTKLGHVRRFLQQGHKVKVTIMFRGREMAHPELGKRILDRVAEDLKDLATVEMKP 159 Query: 121 KFEGRQMIMILSS 133 GR M M+L+ Sbjct: 160 VLAGRDMNMVLAP 172 >gi|283782962|ref|YP_003373716.1| translation initiation factor IF-3 [Gardnerella vaginalis 409-05] gi|283441312|gb|ADB13778.1| translation initiation factor IF-3 [Gardnerella vaginalis 409-05] Length = 253 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q +KE++ R I Sbjct: 58 LNLAREANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQTVAEVKEIRFRLKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 118 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPVGGVELLRRLADEVSESGTVEFAP 177 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 178 KQEGRNIIMTLAPK 191 >gi|255349238|ref|ZP_05381245.1| translation initiation factor IF-3 [Chlamydia trachomatis 70] gi|255503775|ref|ZP_05382165.1| translation initiation factor IF-3 [Chlamydia trachomatis 70s] gi|255507456|ref|ZP_05383095.1| translation initiation factor IF-3 [Chlamydia trachomatis D(s)2923] gi|296435465|gb|ADH17643.1| translation initiation factor IF-3 [Chlamydia trachomatis E/150] gi|296439182|gb|ADH21335.1| translation initiation factor IF-3 [Chlamydia trachomatis E/11023] Length = 198 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 58 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 118 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 177 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 178 KLNGRSLICVIAPGTL 193 >gi|75908259|ref|YP_322555.1| translation initiation factor IF-3 [Anabaena variabilis ATCC 29413] gi|20138475|sp|Q8YNE3|IF3_ANASP RecName: Full=Translation initiation factor IF-3 gi|123758829|sp|Q3MBH6|IF3_ANAVT RecName: Full=Translation initiation factor IF-3 gi|75701984|gb|ABA21660.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena variabilis ATCC 29413] Length = 177 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPKK 177 >gi|282901427|ref|ZP_06309352.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505] gi|281193706|gb|EFA68678.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505] Length = 177 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LRLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL LL+ + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAETLLNRMATDLEPFGEVQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPKK 177 >gi|148259429|ref|YP_001233556.1| translation initiation factor IF-3 [Acidiphilium cryptum JF-5] gi|146401110|gb|ABQ29637.1| bacterial translation initiation factor 3 (bIF-3) [Acidiphilium cryptum JF-5] Length = 144 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 91/133 (68%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A E LDLVEI + P VCK+LD K +Y QK EARKKQK IKE+K+RP ID Sbjct: 12 RRAGEVGLDLVEISPNADPPVCKLLDYGKFKYEQQKKKNEARKKQKVIEIKEIKVRPNID 71 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+A+ F+ DG KVK++++FRGRE+ HQ+LG ++L I+ ++++ PK Sbjct: 72 ENDYQVKLRAMKSFIGDGDKVKVTLRFRGREMAHQELGVKVLERIRLDMETDTKVEQMPK 131 Query: 122 FEGRQMIMILSSK 134 E RQMIM+LS + Sbjct: 132 MENRQMIMVLSPR 144 >gi|325917698|ref|ZP_08179889.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas vesicatoria ATCC 35937] gi|325536092|gb|EGD07897.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas vesicatoria ATCC 35937] Length = 154 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 18 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 78 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPKK 152 >gi|303242607|ref|ZP_07329083.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] gi|302589864|gb|EFL59636.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] Length = 173 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 58/132 (43%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +LDLV+I P VC+I+D K + + K EARK QK IKEV++ I+ Sbjct: 41 LANSKSLDLVKIAPQAAPPVCRIMDYGKYIFELNKKEKEARKNQKVVSIKEVRLSASIEE 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K+K FL+DG KVK+SVKFRGRE+ + LG ++L E E+ ++ +PK Sbjct: 101 HDFEFKVKNAVKFLKDGDKVKVSVKFRGREMNYTALGEQVLQKFAESVQEVGTVEKKPKL 160 Query: 123 EGRQMIMILSSK 134 EGR M+MIL+ K Sbjct: 161 EGRNMLMILNPK 172 >gi|30248960|ref|NP_841030.1| initiation factor 3 [Nitrosomonas europaea ATCC 19718] gi|30138577|emb|CAD84868.1| Initiation factor 3 [Nitrosomonas europaea ATCC 19718] Length = 164 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 78/128 (60%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI P VC+++D K Y K +A+ +QK +KE+K RP D D + Sbjct: 14 GVDLVEIAPGAEPPVCRLMDYGKYLYQESKKKHDAKLRQKQIQVKEIKFRPNTDEGDYGI 73 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL DG KVKI+++FRGRE+ HQ+ G LL ++ + + ++ PK EGRQM Sbjct: 74 KLRNLIHFLNDGDKVKITLRFRGREMAHQEFGVRLLERVRGDLADHAVVEQFPKLEGRQM 133 Query: 128 IMILSSKC 135 +M+LS K Sbjct: 134 VMVLSPKK 141 >gi|225389792|ref|ZP_03759516.1| hypothetical protein CLOSTASPAR_03540 [Clostridium asparagiforme DSM 15981] gi|225044150|gb|EEG54396.1| hypothetical protein CLOSTASPAR_03540 [Clostridium asparagiforme DSM 15981] Length = 183 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A LDLV+I + P VCKI+D K RY + EARKKQK IKEV++ P I Sbjct: 49 LKLAQDAELDLVKIAPTAKPPVCKIIDYGKFRYENARKEKEARKKQKVIEIKEVRLSPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ +D Sbjct: 109 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMYKSKYILDDFAESLADIAVVDKPS 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 169 KVEGRSMVMFLTAK 182 >gi|85714127|ref|ZP_01045116.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A] gi|85699253|gb|EAQ37121.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A] Length = 171 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 97/134 (72%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI + +P VCKI+D K ++ QK A EARK+QK IKE+K+RP+I Sbjct: 38 IKMAMEAGMDLVEIAPNSSPPVCKIMDYGKYKFQAQKKAAEARKRQKIVEIKEIKLRPMI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K ++++ + Sbjct: 98 DDHDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLDKVKADVAAFAKVEQDA 157 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 158 RFEGRQVVMVLAPR 171 >gi|310830634|ref|YP_003965735.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] gi|309250101|gb|ADO59667.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2] Length = 168 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLV I + TP VCK+++ K Y + E RK QK KEV+ I Sbjct: 33 LLIAEEAKLDLVNISPAATPPVCKVVNYGKFLYEQNRKEKEIRKNQKIVETKEVRFSARI 92 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K + + FL+ G +VK+S++F+GREI H ++G +L + + P Sbjct: 93 DEHDFQTKSRNVQKFLKSGNRVKLSIQFKGREIAHSEIGLNILLRLAAEMEAFGSPERTP 152 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM L+ K Sbjct: 153 KLEGRQMIMFLNPKA 167 >gi|282881464|ref|ZP_06290138.1| translation initiation factor IF-3 [Prevotella timonensis CRIS 5C-B1] gi|281304690|gb|EFA96776.1| translation initiation factor IF-3 [Prevotella timonensis CRIS 5C-B1] Length = 232 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ ++DLVEI + P VC+++D K Y +K A E ++KQ IKE++ P Sbjct: 38 LDLARQQDVDLVEISPNAQPPVCRLIDYSKFLYQQKKRAKEMKQKQVKVDIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G +V+ V FRGR I+ ++ G LL + +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNRVRAYVFFRGRSILFKEQGEVLLLRFANDLEDFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + LS K V Sbjct: 158 KLEGKRMFIYLSPKQV 173 >gi|294508833|ref|YP_003572892.1| translation initiation factor IF-3 [Salinibacter ruber M8] gi|294345162|emb|CBH25940.1| Translation initiation factor IF-3 [Salinibacter ruber M8] Length = 200 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ P VCKILD K RY QK RKK KS +KE++ RP Sbjct: 64 LDRARDHELDLVEVAPDADPPVCKILDYGKYRYEKQKEEQRRRKKSKSMEMKELRFRPRT 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+ FL DG KVK V+F+GR+I+++D G +LL + E EI+RID +P Sbjct: 124 EEHDFNFKVDHAREFLEDGNKVKAYVQFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQP 183 Query: 121 KFEGRQMIMILSS 133 + EGR+M+MIL+ Sbjct: 184 EMEGRRMVMILAP 196 >gi|162147244|ref|YP_001601705.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|209544294|ref|YP_002276523.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|161785821|emb|CAP55392.1| Translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] gi|209531971|gb|ACI51908.1| translation initiation factor IF-3 [Gluconacetobacter diazotrophicus PAl 5] Length = 173 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP I Sbjct: 40 LMRAYAVGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEARKKQKVIEIKEVKVRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++A+ F+ +G KVK++++FRGRE+ HQDLG ++L I+ E ++++ P Sbjct: 100 DENDYQVKMRAMKSFIGEGDKVKVTLRFRGREMAHQDLGIKVLERIRTEMDEQAKVEQMP 159 Query: 121 KFEGRQMIMILSSK 134 K E RQMIM+LS + Sbjct: 160 KLENRQMIMVLSPR 173 >gi|251789559|ref|YP_003004280.1| translation initiation factor IF-3 [Dickeya zeae Ech1591] gi|247538180|gb|ACT06801.1| translation initiation factor IF-3 [Dickeya zeae Ech1591] Length = 180 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLSELSVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|294673347|ref|YP_003573963.1| translation initiation factor IF-3 [Prevotella ruminicola 23] gi|294472015|gb|ADE81404.1| translation initiation factor IF-3 [Prevotella ruminicola 23] Length = 235 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 38 LNQARDMGVDLVEISPNANPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E+ +++ P Sbjct: 98 DEHDYQFKLKHAREFLEEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEVGKVEGMP 157 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + L+ K Sbjct: 158 SLEGKKMFLYLAPKKA 173 >gi|270290437|ref|ZP_06196662.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4] gi|304384682|ref|ZP_07367028.1| translation initiation factor IF3 [Pediococcus acidilactici DSM 20284] gi|270281218|gb|EFA27051.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4] gi|304328876|gb|EFL96096.1| translation initiation factor IF3 [Pediococcus acidilactici DSM 20284] Length = 166 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLD+V + P V KI+D K R+ QK EARKKQK+ IKE+++ P I Sbjct: 30 IQIAEEANLDVVVVSPKAKPPVAKIMDYGKYRFEQQKKKREARKKQKTVSIKEIRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+D+GR++L + E +I+RI+ P Sbjct: 90 DTNDFNTKLKNAKKFLGKGDKVRVSIRFKGRAITHKDIGRKVLERMAEETSDIARIEARP 149 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ Sbjct: 150 KMDGRSMFLVLAPNA 164 >gi|56475897|ref|YP_157486.1| translation initiation factor IF-3 [Aromatoleum aromaticum EbN1] gi|61213067|sp|Q5P7X6|IF3_AZOSE RecName: Full=Translation initiation factor IF-3 gi|56311940|emb|CAI06585.1| translation initiation factor IF-3 [Aromatoleum aromaticum EbN1] Length = 173 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 83/128 (64%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI P VC+++D K +Y QK A EAR KQK IKEVK+RP D +D Q+ Sbjct: 44 GLDLVEIAPMAQPPVCRVMDFGKFKYQEQKKAHEARLKQKQVQIKEVKLRPATDENDYQI 103 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ+ G L +K EI +++ PK EGRQM Sbjct: 104 KLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERVKADLEEIGQVEQMPKMEGRQM 163 Query: 128 IMILSSKC 135 IM++S K Sbjct: 164 IMVISPKK 171 >gi|300856609|ref|YP_003781593.1| putative translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] gi|300436724|gb|ADK16491.1| predicted translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] Length = 173 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I + P VCKI++ K Y K EARKKQK IKEV+ P I Sbjct: 38 LRLAEEKELDLVMISPNAKPPVCKIMNYGKFMYEQVKKDKEARKKQKVVNIKEVRFSPKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL G KVK++V+FRGRE + +G+++L + ++ I+ +P Sbjct: 98 EEHDISIKAKNARKFLLAGDKVKVTVRFRGREADYSFIGKKILDIFHSKLQDVCVIERQP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS+K Sbjct: 158 KLEGRNMIMFLSAKKA 173 >gi|317047869|ref|YP_004115517.1| translation initiation factor IF-3 [Pantoea sp. At-9b] gi|316949486|gb|ADU68961.1| translation initiation factor IF-3 [Pantoea sp. At-9b] Length = 180 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGIEVLNRVKEDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|297182199|gb|ADI18370.1| translation initiation factor 3 (if-3) [uncultured actinobacterium HF4000_04C13] Length = 230 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 75/127 (59%) Query: 7 ANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 LDLVE+ P VC+I+D K +Y + A E+RKK +KE+K RP I D Sbjct: 1 MGLDLVEVADKADPPVCRIMDYGKFKYEQSQRAKESRKKATHVLVKEMKYRPKIGPGDFD 60 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 K + ++ FL DG KVK+++ FRGRE+ H +LGR +L + E + R++ PK +GR Sbjct: 61 TKTRKVEQFLGDGSKVKVTIMFRGREMQHPELGRRILDRVAETVDHVGRVEVFPKQDGRN 120 Query: 127 MIMILSS 133 MIM+L Sbjct: 121 MIMVLVP 127 >gi|282896200|ref|ZP_06304223.1| Initiation factor 3 [Raphidiopsis brookii D9] gi|281198889|gb|EFA73767.1| Initiation factor 3 [Raphidiopsis brookii D9] Length = 177 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LRLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL LL+ + I P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAETLLNRMATDLEPFGEIQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPKK 177 >gi|160893268|ref|ZP_02074056.1| hypothetical protein CLOL250_00814 [Clostridium sp. L2-50] gi|156865351|gb|EDO58782.1| hypothetical protein CLOL250_00814 [Clostridium sp. L2-50] Length = 164 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLV+I P VCKI+D K RY + + EARKKQK+ IKEV++ P I Sbjct: 30 LKLAKEAELDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEARKKQKTMEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ FL G KVK++++FRGRE+ H + + +L E+ +I+ ID Sbjct: 90 DTNDLNTKVNQARKFLTHGDKVKVTLRFRGRELAHVEQTKGILDEFAEKLSDIAVIDKPA 149 Query: 121 KFEGRQMIMILSSK 134 KFEGR MIM L+ K Sbjct: 150 KFEGRSMIMFLTEK 163 >gi|187931726|ref|YP_001891711.1| translation initiation factor IF-3 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712635|gb|ACD30932.1| translation initiation factor IF-3 [Francisella tularensis subsp. mediasiatica FSC147] Length = 170 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 35 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKRAQAKKNQKQTQVKEVKLRPVT 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 95 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 154 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 155 KLEGRQMIMVLGPKK 169 >gi|238898886|ref|YP_002924568.1| protein chain initiation factor IF-3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259491506|sp|C4K777|IF3_HAMD5 RecName: Full=Translation initiation factor IF-3 gi|229466646|gb|ACQ68420.1| protein chain initiation factor IF-3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 184 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 57/140 (40%), Positives = 87/140 (62%), Gaps = 5/140 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+EA +DLVEI + P VC+++D K Y K+ + +KKQ+ +KEVK RP Sbjct: 43 LQKAEEAGVDLVEISPNADPPVCRVMDYGKFLYEKSKSIKDQKKKQRVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE----ISRI 116 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G +L I+ E I+ + Sbjct: 103 DEGDYQVKLRSLTRFLEEGDKAKITLRFRGREMAHQQIGMAMLERIRRDLCESENSIALV 162 Query: 117 DCEP-KFEGRQMIMILSSKC 135 + P + EGRQ+ M+L+ K Sbjct: 163 ESFPARIEGRQISMVLAPKK 182 >gi|268608873|ref|ZP_06142600.1| translation initiation factor IF-3 [Ruminococcus flavefaciens FD-1] Length = 174 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA + +LDLV+I TP VC+I+D K + QK EARK QK IKE++M ID Sbjct: 39 QMAYDKDLDLVKIAPQATPPVCRIMDYGKYCFEQQKREKEARKNQKVVAIKEIRMFSTID 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+ FL+ G K+K+SV+FR R I H LG ELL KE + +D K Sbjct: 99 THDFETKVNQAVKFLQGGDKLKVSVRFRKRAIAHPQLGEELLERFKEAVSAVGTVDKPAK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR ++M + K Sbjct: 159 MEGRSIVMFVVPKAA 173 >gi|288934885|ref|YP_003438944.1| translation initiation factor IF-3 [Klebsiella variicola At-22] gi|288889594|gb|ADC57912.1| translation initiation factor IF-3 [Klebsiella variicola At-22] Length = 180 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLTRVRDDLSELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|88855450|ref|ZP_01130114.1| translation initiation factor IF-3 [marine actinobacterium PHSC20C1] gi|88815357|gb|EAR25215.1| translation initiation factor IF-3 [marine actinobacterium PHSC20C1] Length = 205 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA+LDLVE+ + P V KI+D K +Y + A EAR+ Q +T +KEV+ R I Sbjct: 39 LKLAQEADLDLVEVAPNSKPPVAKIMDYGKFKYEEAQKAKEARRNQTNTILKEVRFRLKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K +GFL G KVK + FRGRE D G LL E E I+ P Sbjct: 99 DKHDYETKRKRAEGFLAGGDKVKAMILFRGREQSRPDQGVRLLQKFAEDVSEFGSIESTP 158 Query: 121 KFEGRQMIMILSS 133 +GR M+MI+ Sbjct: 159 MIDGRNMVMIIGP 171 >gi|206575853|ref|YP_002237975.1| translation initiation factor IF-3 [Klebsiella pneumoniae 342] gi|290509027|ref|ZP_06548398.1| translation initiation factor IF-3 [Klebsiella sp. 1_1_55] gi|206564911|gb|ACI06687.1| translation initiation factor IF-3 [Klebsiella pneumoniae 342] gi|289778421|gb|EFD86418.1| translation initiation factor IF-3 [Klebsiella sp. 1_1_55] Length = 155 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 18 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 78 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLTRVRDDLSELAVVESFP 137 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 138 TKIEGRQMIMVLAPKK 153 >gi|14194837|sp|Q9PFE1|IF3_XYLFA RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 44 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 104 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 163 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 164 RLEGRQMVMMVAPRK 178 >gi|303232505|ref|ZP_07319192.1| translation initiation factor IF-3 [Atopobium vaginae PB189-T1-4] gi|302481389|gb|EFL44462.1| translation initiation factor IF-3 [Atopobium vaginae PB189-T1-4] Length = 165 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKVEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VK+++ FRGRE+ H + G +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKRGARVKVTIMFRGREMAHPEQGLNVLERLAADLKPYATVEQQPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|258647089|ref|ZP_05734558.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259] gi|260853036|gb|EEX72905.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259] Length = 214 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 75/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ LDLVEI + P VC+I+D K Y +K+ E + KQ +KE++ P Sbjct: 39 LQLAEQKGLDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKELKAKQVKIEVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KVK V FRGR I+ ++ G LL E +++ P Sbjct: 99 DEHDYDFKLKHAKEFLSDGNKVKAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI+ L+ K Sbjct: 159 VLEGKRMIIFLTPKKT 174 >gi|220905883|ref|YP_002481194.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425] gi|219862494|gb|ACL42833.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425] Length = 179 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I++ K ++ +K A EARKKQ + +KEVKMR I Sbjct: 45 LRIAQEKELDLVLVAEKAEPPVCRIINYGKYKFEQEKKAREARKKQHTADVKEVKMRYRI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +V++ + FL+DG KVK ++ F+GREI H L ELL+ + ++ I P Sbjct: 105 DEHDYKVRINHAERFLKDGDKVKATITFKGREIQHSHLAEELLNRMAADLQAVAEIQQAP 164 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIM+L+ K Sbjct: 165 KKEGRNMIMLLAPKK 179 >gi|114328277|ref|YP_745434.1| protein translation initiation factor 3 [Granulibacter bethesdensis CGDNIH1] gi|114316451|gb|ABI62511.1| bacterial Protein Translation Initiation Factor 3 (IF-3) [Granulibacter bethesdensis CGDNIH1] Length = 173 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A LDL+EI + P V KILD K +Y QK EARK+QK IKE+K+RP I Sbjct: 40 LIRAYAVGLDLLEISPNAEPPVVKILDYGKFKYEQQKKKNEARKRQKVIEIKEIKVRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++A+ F+ +G KVK++++FRGRE+ HQ+LG +L I+E ++++ P Sbjct: 100 DENDYQVKMRAMRSFISEGDKVKVTLRFRGREMAHQELGARVLQRIREELDAETKVEQMP 159 Query: 121 KFEGRQMIMILSSK 134 K E RQM+M+L+ + Sbjct: 160 KMENRQMVMVLAPR 173 >gi|325266387|ref|ZP_08133065.1| translation initiation factor IF3 [Kingella denitrificans ATCC 33394] gi|324982180|gb|EGC17814.1| translation initiation factor IF3 [Kingella denitrificans ATCC 33394] Length = 155 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 LSMAEEKDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL DG KVKI+++FRGRE+ HQ+ G +LL +K E++ ++ P Sbjct: 80 DEGDYNIKMRNVKRFLEDGDKVKITLRFRGREMAHQEFGAQLLERVKADLEELAAVESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KMEGRQMVMMVAPKK 154 >gi|199597226|ref|ZP_03210658.1| Translation initiation factor 3 (IF-3) [Lactobacillus rhamnosus HN001] gi|199592030|gb|EDZ00105.1| Translation initiation factor 3 (IF-3) [Lactobacillus rhamnosus HN001] Length = 137 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 1 MAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 61 GEADFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 120 Query: 121 KFEGRQMIMILSSKC 135 K +GR M ++L+ + Sbjct: 121 KMDGRSMFLMLAPRA 135 >gi|291279884|ref|YP_003496719.1| translation initiation factor IF-3 [Deferribacter desulfuricans SSM1] gi|290754586|dbj|BAI80963.1| translation initiation factor IF-3 [Deferribacter desulfuricans SSM1] Length = 155 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKK--QKSTGIKEVKMRP 58 +++A+E DLVE+ + P VCK++D K ++ K EARKK Q +KE+K RP Sbjct: 18 LKVAEERGYDLVEVAPNAKPPVCKVMDYGKYKFEKNKKEREARKKLRQHQIDVKEMKFRP 77 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD QVKLK + FL DG KVK+ +++RGRE+ Q+ G E+L+ I ++ ++ Sbjct: 78 KIDEHDYQVKLKHVKRFLEDGDKVKVVMRYRGREMAFQEQGLEVLNRIVRDLEDLCVVEK 137 Query: 119 EPKFEGRQMIMILSSK 134 P+ +GRQ +M+L+ K Sbjct: 138 HPEMQGRQQVMVLAPK 153 >gi|313680891|ref|YP_004058630.1| bacterial translation initiation factor 3 (bif-3) [Oceanithermus profundus DSM 14977] gi|313153606|gb|ADR37457.1| bacterial translation initiation factor 3 (bIF-3) [Oceanithermus profundus DSM 14977] Length = 205 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +LDLV + + +P V K+LD K RY Q+ EARKK K +K +K R I Sbjct: 45 LDLAKQKDLDLVLVGPTASPPVAKLLDYGKWRYEQQQAEKEARKKAKRQEMKSIKFRVKI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL + FL G KVK+++ FRGRE+ H +LG+++L + E EI+ ++ +P Sbjct: 105 DEHDYQTKLGHVRRFLEAGHKVKVTIMFRGREMAHPELGKKILDRVAEDLSEIAVVEMKP 164 Query: 121 KFEGRQMIMILSS 133 GR M M+L+ Sbjct: 165 LMAGRDMNMVLAP 177 >gi|15639836|ref|NP_219286.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026074|ref|YP_001933846.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum SS14] gi|6016326|sp|O83822|IF3_TREPA RecName: Full=Translation initiation factor IF-3 gi|238689348|sp|B2S488|IF3_TREPS RecName: Full=Translation initiation factor IF-3 gi|3323163|gb|AAC65816.1| translation initiation factor 3 (infC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018649|gb|ACD71267.1| translation initiation factor 3 [Treponema pallidum subsp. pallidum SS14] gi|291060208|gb|ADD72943.1| translation initiation factor IF-3 [Treponema pallidum subsp. pallidum str. Chicago] Length = 179 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ NLDLVE+ +P VCKILD K R+ + K +++K+Q+ +KEV+M+P I Sbjct: 43 LRMARDINLDLVEVAPQASPPVCKILDYGKYRFEMGKKLRDSKKRQRLQTLKEVRMQPKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ K K I FL +G KVK++++FRGRE+ H DLG +L N+ R ++ + Sbjct: 103 NDHDMAFKAKHIQRFLDEGDKVKVTIRFRGRELAHTDLGFNVLQNVLGRLVCGYSVEKQA 162 Query: 121 KFEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 163 AMEGRSMSMTLTPKS 177 >gi|29345833|ref|NP_809336.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron VPI-5482] gi|39931281|sp|Q8AAP1|IF3_BACTN RecName: Full=Translation initiation factor IF-3 gi|29337726|gb|AAO75530.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron VPI-5482] Length = 185 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPKK 173 >gi|254524881|ref|ZP_05136936.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14] gi|219722472|gb|EED40997.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14] Length = 154 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCKI+D K ++ QK A EA+KK K IKEVK RPV Sbjct: 18 LSMAEDEGLDLVEIQPQADPPVCKIMDFGKFKFEAQKKANEAKKKSKQVEIKEVKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL DG K+K++++FRGRE+ HQ+LGRE+ + I+ GE I+ P Sbjct: 78 DEGDYQIKLRKMREFLEDGDKIKVNIRFRGREMSHQELGREMANRIEADLGEDIVIESRP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 138 RLEGRQMVMMIAPKK 152 >gi|258543037|ref|YP_003188470.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01] gi|329115644|ref|ZP_08244366.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001] gi|256634115|dbj|BAI00091.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01] gi|256637175|dbj|BAI03144.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-03] gi|256640227|dbj|BAI06189.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-07] gi|256643284|dbj|BAI09239.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-22] gi|256646339|dbj|BAI12287.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-26] gi|256649392|dbj|BAI15333.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-32] gi|256652378|dbj|BAI18312.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655436|dbj|BAI21363.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus IFO 3283-12] gi|326695072|gb|EGE46791.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001] Length = 162 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 91/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A LDL+EI + P V KILD K +Y QK EA+KKQK IKEVK+RP I Sbjct: 29 LAKAYSVGLDLLEISPNAEPPVAKILDYGKFKYEQQKKRNEAKKKQKVIEIKEVKVRPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D QVK++A+ F+ +G KVK++++FRGRE+ HQ+LG ++L I+ E+++++ P Sbjct: 89 DENDYQVKMRAVKTFIGEGDKVKVTLRFRGREMAHQELGIKVLERIRGEMDEVAKVEQMP 148 Query: 121 KFEGRQMIMILSSK 134 + E RQMIM+L+ + Sbjct: 149 RLENRQMIMVLAPR 162 >gi|116620544|ref|YP_822700.1| translation initiation factor 3 [Candidatus Solibacter usitatus Ellin6076] gi|122256227|sp|Q02D92|IF3_SOLUE RecName: Full=Translation initiation factor IF-3 gi|116223706|gb|ABJ82415.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Solibacter usitatus Ellin6076] Length = 213 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 74/133 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLV I + P V K +D +Y ++K +ARKKQ +KE+K RP Sbjct: 45 LRKAQELGLDLVLIAPTAVPPVAKAVDFGHYQYDLKKKQHDARKKQHVVQVKELKFRPNT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K FL++G +VK V+FRGREI H DLG++LL ++ P Sbjct: 105 DDHDYDFKKKHAIRFLQEGNRVKAVVQFRGREIAHADLGKKLLMRFAADLTAYGTVEGMP 164 Query: 121 KFEGRQMIMILSS 133 + EGR +++S Sbjct: 165 RLEGRNAHVLISP 177 >gi|307131176|ref|YP_003883192.1| protein chain initiation factor IF-3 [Dickeya dadantii 3937] gi|306528705|gb|ADM98635.1| protein chain initiation factor IF-3 [Dickeya dadantii 3937] Length = 180 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLNELSVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|240146871|ref|ZP_04745472.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82] gi|257200969|gb|EEU99253.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82] gi|291536060|emb|CBL09172.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia intestinalis M50/1] gi|291538553|emb|CBL11664.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia intestinalis XB6B4] Length = 165 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EARKKQK +KE+++ P I Sbjct: 30 MKLAEEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEARKKQKVVELKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVKI+++FRGRE+ H + + +L + E E++ ++ P Sbjct: 90 DSNDLNTKMNAAKKFLSKGDKVKITLRFRGREMAHMNASKHILDDFAESLAEVAVVEKAP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+L+ K Sbjct: 150 KVEGRSISMVLAEKK 164 >gi|186686412|ref|YP_001869608.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|238691747|sp|B2IY66|IF3_NOSP7 RecName: Full=Translation initiation factor IF-3 gi|186468864|gb|ACC84665.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] Length = 177 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV I P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLISDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL +LL + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGELQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPKK 177 >gi|242239482|ref|YP_002987663.1| translation initiation factor IF-3 [Dickeya dadantii Ech703] gi|242131539|gb|ACS85841.1| translation initiation factor IF-3 [Dickeya dadantii Ech703] Length = 180 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LERAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRVRDDLIELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|260463242|ref|ZP_05811444.1| translation initiation factor IF-3 [Mesorhizobium opportunistum WSM2075] gi|259031092|gb|EEW32366.1| translation initiation factor IF-3 [Mesorhizobium opportunistum WSM2075] Length = 134 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 69/132 (52%), Positives = 96/132 (72%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+EA LDLVEI + P V KILDL KL+Y QK A EARK QK IKE+KMRP ID Sbjct: 3 LAEEAGLDLVEISPNAVPPVVKILDLGKLKYANQKKAAEARKNQKVIEIKEIKMRPNIDS 62 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K+KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++E I++++ EPK Sbjct: 63 HDYETKMKAVRRFFEEGDKVKLTLRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKL 122 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ + Sbjct: 123 EGRQMMMVLAPR 134 >gi|325677877|ref|ZP_08157519.1| translation initiation factor IF-3 [Ruminococcus albus 8] gi|324110431|gb|EGC04605.1| translation initiation factor IF-3 [Ruminococcus albus 8] Length = 174 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLV+I TP VC+I+D K + QK EARK QK IKE++M I Sbjct: 38 LKIAFEKDLDLVKIAPQATPPVCRIMDYGKFLFEQQKREKEARKNQKVIEIKEIRMSSTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G K+K+SV+FR R + H G ELL KE E+ +D Sbjct: 98 DTHDFDTKVNQAIKFLKGGDKLKVSVRFRKRTVAHPQFGEELLVKFKEAVSEVGIVDKPS 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR ++M ++ K Sbjct: 158 KMEGRSLVMFVAPKA 172 >gi|32129608|sp|Q87AB3|IF3_XYLFT RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 44 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 104 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 163 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 164 RLEGRQMVMMVAPRK 178 >gi|283456369|ref|YP_003360933.1| protein translation initiation factor InfC [Bifidobacterium dentium Bd1] gi|283103003|gb|ADB10109.1| infC Bacterial Protein Translation Initiation Factor 3(IF-3) [Bifidobacterium dentium Bd1] Length = 201 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + IKE++ R I Sbjct: 10 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 70 DDHDFEVKKGHVVRFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAP 129 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 130 KQEGRNIIMTLAPK 143 >gi|146282711|ref|YP_001172864.1| translation initiation factor IF-3 [Pseudomonas stutzeri A1501] gi|145570916|gb|ABP80022.1| translation initiation factor IF-3 [Pseudomonas stutzeri A1501] gi|327481050|gb|AEA84360.1| translation initiation factor IF-3 [Pseudomonas stutzeri DSM 4166] Length = 177 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADANPPVCRIMDYGKHLFEKKKQAAAAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ EI ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEADLIEIGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|298480839|ref|ZP_06999034.1| translation initiation factor IF-3 [Bacteroides sp. D22] gi|295085228|emb|CBK66751.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides xylanisolvens XB1A] gi|298272862|gb|EFI14428.1| translation initiation factor IF-3 [Bacteroides sp. D22] Length = 203 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|271500481|ref|YP_003333506.1| translation initiation factor IF-3 [Dickeya dadantii Ech586] gi|270344036|gb|ACZ76801.1| translation initiation factor IF-3 [Dickeya dadantii Ech586] Length = 180 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E+S ++ P Sbjct: 103 DDGDYQVKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGIEMLNRIRDDLNELSVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|294626196|ref|ZP_06704802.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667580|ref|ZP_06732795.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927168|ref|ZP_08188431.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas perforans 91-118] gi|292599548|gb|EFF43679.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292602700|gb|EFF46136.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325542481|gb|EGD13960.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas perforans 91-118] Length = 147 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ + I+ G+ I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRP 130 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 131 RLEGRQMVMMIAPKK 145 >gi|241894789|ref|ZP_04782085.1| translation initiation factor 3 [Weissella paramesenteroides ATCC 33313] gi|241872001|gb|EER75752.1| translation initiation factor 3 [Weissella paramesenteroides ATCC 33313] Length = 143 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A +A+LDLV + ++ P V KI++ K ++ QK E RK QK IKE+++ P ID Sbjct: 8 RLADDADLDLVLVQANAKPPVAKIMNYGKFKFEAQKKQREQRKNQKVVNIKEIRLSPTID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++D K FL G KVK+S++FRGR I H+++GRE+++ + EI++++ K Sbjct: 68 VNDFNTKKNNAIKFLNKGNKVKVSIRFRGRAITHKEIGREVMNRMAMDLEEIAKVESRAK 127 Query: 122 FEGRQMIMILSSK 134 EGR M M+L+ K Sbjct: 128 MEGRSMFMVLAPK 140 >gi|325919877|ref|ZP_08181867.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas gardneri ATCC 19865] gi|325549661|gb|EGD20525.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas gardneri ATCC 19865] Length = 147 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 65/135 (48%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAKAEEEGLDLVEIQPQADPPVCKIMDFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVK++++FRGRE+ HQ+LGRE+ S I+ GE I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKVNIRFRGREMSHQELGREMASRIEADLGEDIVIESRP 130 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ K Sbjct: 131 RLEGRQMVMMIAPKK 145 >gi|218296413|ref|ZP_03497156.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23] gi|218243207|gb|EED09738.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23] Length = 157 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + + P V +I++ K RY Q EARKK K T +K +K R I Sbjct: 20 LRLAREQDLDLVLVGPTAEPPVARIMNYSKWRYEQQVAEKEARKKAKRTEVKSIKFRVKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL +G KVK+++ FRGRE+ + +LG+ LL + + ++ ++ +P Sbjct: 80 DDHDYQTKLNHIKRFLEEGHKVKVTIMFRGREMSYPELGQRLLERVAKDLEGLAVVEMKP 139 Query: 121 KFEGRQMIMILSSKCV 136 + GR M M+L+ V Sbjct: 140 ELLGRDMNMLLAPAKV 155 >gi|116492467|ref|YP_804202.1| translation initiation factor 3 [Pediococcus pentosaceus ATCC 25745] gi|116102617|gb|ABJ67760.1| bacterial translation initiation factor 3 (bIF-3) [Pediococcus pentosaceus ATCC 25745] Length = 166 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EANLD+V + P V KI+D K R+ QK EARKKQK+ IKE+++ P I Sbjct: 30 ISMAEEANLDVVVVSPKAKPPVAKIMDYGKYRFEQQKKQREARKKQKTVSIKEIRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+++GR++L + + +++R++ P Sbjct: 90 DTNDFNTKLKNATKFLSKGDKVRVSIRFKGRAITHKEIGRKVLERMAKETSDVARVEVHP 149 Query: 121 KFEGRQMIMILSS 133 K +GR M ++LS Sbjct: 150 KMDGRSMFLVLSP 162 >gi|187776941|ref|ZP_02993414.1| hypothetical protein CLOSPO_00485 [Clostridium sporogenes ATCC 15579] gi|187775600|gb|EDU39402.1| hypothetical protein CLOSPO_00485 [Clostridium sporogenes ATCC 15579] Length = 164 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+ ++ PK Sbjct: 90 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELGVMEKAPK 149 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPRKA 164 >gi|39931271|sp|Q83L38|IF3_SHIFL RecName: Full=Translation initiation factor IF-3 Length = 206 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 69 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 128 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 129 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 188 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 189 TKIEGRQMIMVLAPKK 204 >gi|113474737|ref|YP_720798.1| translation initiation factor 3 [Trichodesmium erythraeum IMS101] gi|110165785|gb|ABG50325.1| bacterial translation initiation factor 3 (bIF-3) [Trichodesmium erythraeum IMS101] Length = 178 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE LDLV + P VC+I+D K + +K +A++KQ + +KEVKMR I Sbjct: 42 LRMAQEKGLDLVMVSDKADPPVCRIIDYGKYLFEQKKKVQDAKRKQHNAEVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V+L FL G KVK ++ FRGREI H +L ELL + +++ I P Sbjct: 102 EEHDYNVRLSHAKRFLESGDKVKATIMFRGREIQHSNLAEELLQRMATDLKDLAEIQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 162 KKEGRSMMMLLSPKK 176 >gi|322807447|emb|CBZ05021.1| translation initiation factor 3 [Clostridium botulinum H04402 065] Length = 165 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 79/135 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK +KEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKIINLKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ + E I+ PK Sbjct: 90 AHDIEIKANNAKKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYAKVEEAGVIEKAPK 149 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPRKA 164 >gi|116333672|ref|YP_795199.1| translation initiation factor 3 [Lactobacillus brevis ATCC 367] gi|116099019|gb|ABJ64168.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus brevis ATCC 367] Length = 155 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLD+V + P V +I+D K R+ +QK EARKKQK +KEV++ P I Sbjct: 18 LQIAEDANLDVVLVAPKAKPPVARIMDYGKYRFELQKKQREARKKQKVVSVKEVRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK FL G KV++S++F+GR I H+D+GRE+L+ + +++ ++ P Sbjct: 78 DTNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKDIGREVLNRMAAETADVATVEQRP 137 Query: 121 KFEGRQMIMILSS 133 K +GR M ++LS Sbjct: 138 KMDGRSMFLMLSP 150 >gi|291523567|emb|CBK81860.1| bacterial translation initiation factor 3 (bIF-3) [Coprococcus catus GD/7] Length = 165 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EANLDLV+I + P VCKI+D K RY + EARKKQK+ +KE+++ P I Sbjct: 30 MKLAREANLDLVKIAPTAKPPVCKIIDYGKYRYEQARREKEARKKQKTIEVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++V+FRGRE+ H +G+ +L + ++ +I+ ID Sbjct: 90 DTNDLNTKVNQARKFVSGGNKVKVAVRFRGRELAHTAVGKTILEDFAQKLSDIAVIDKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EG+ M+M L K Sbjct: 150 KLEGKSMVMFLVEK 163 >gi|16760561|ref|NP_456178.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141678|ref|NP_805020.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|20138479|sp|Q8Z6I3|IF3_SALTI RecName: Full=Translation initiation factor IF-3 gi|25299576|pir||AB0706 translation initiation factor IF-3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502857|emb|CAD02019.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29137306|gb|AAO68869.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 180 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|220928736|ref|YP_002505645.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|219999064|gb|ACL75665.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 164 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K + + K EARK QK IKEV+ P I+ Sbjct: 31 KLANSKNLDLVKIAPQGVPPVCKIMDYGKYLFELAKKEKEARKNQKIISIKEVRFSPSIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+DG KVK+SVKFRGRE+ + +G ++L E ++ ++ PK Sbjct: 91 NHDFEFKVKNAYKFLKDGDKVKVSVKFRGREMHYTSIGNQILDKFAEAVKDVGTVERRPK 150 Query: 122 FEGRQMIMILSSK 134 EG+ MIMIL+ K Sbjct: 151 LEGKSMIMILNPK 163 >gi|297242753|ref|ZP_06926691.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis AMD] gi|298253376|ref|ZP_06977168.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis 5-1] gi|296888964|gb|EFH27698.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis AMD] gi|297532771|gb|EFH71657.1| translation initiation factor 3 (IF-3) [Gardnerella vaginalis 5-1] Length = 215 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q +KE++ R I Sbjct: 20 LNLAREANLDLVEVAPTAKPPVAKLIDYGKYKYNEKIKAREARRNQTVAEVKEIRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK + FL G KVK+++ RGRE G ELL + + E ++ P Sbjct: 80 DDHDFDVKKGHVLRFLNGGDKVKVTIMLRGREQSRPVGGVELLRRLADEVSESGTVEFAP 139 Query: 121 KFEGRQMIMILSSK 134 K EGR +IM L+ K Sbjct: 140 KQEGRNIIMTLAPK 153 >gi|170755251|ref|YP_001782771.1| translation initiation factor IF-3 [Clostridium botulinum B1 str. Okra] gi|169120463|gb|ACA44299.1| translation initiation factor IF-3 [Clostridium botulinum B1 str. Okra] Length = 184 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGVMEKAPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPRKA 184 >gi|114319928|ref|YP_741611.1| translation initiation factor 3 [Alkalilimnicola ehrlichii MLHE-1] gi|114226322|gb|ABI56121.1| bacterial translation initiation factor 3 (bIF-3) [Alkalilimnicola ehrlichii MLHE-1] Length = 146 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 87/128 (67%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVE+D++ P VC+I+D K ++ K A ARKKQK +KEVK RP D D +V Sbjct: 17 GMDLVELDANAKPPVCRIMDYGKFKFEQSKKAQAARKKQKQIQVKEVKFRPGTDEGDYKV 76 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL DG K K++++FRGRE+ HQDLG +LL+ +++ +I+ +D PK EGR M Sbjct: 77 KLRNLRRFLEDGDKAKVTLRFRGREMAHQDLGLKLLNRVEQDLEDIATVDQRPKMEGRLM 136 Query: 128 IMILSSKC 135 +M++S + Sbjct: 137 VMMMSPRK 144 >gi|39546314|ref|NP_460300.2| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|462399|sp|P33321|IF3_SALTY RecName: Full=Translation initiation factor IF-3 gi|154153|gb|AAC36814.1| translation intitiation factor IF3 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|267993214|gb|ACY88099.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323129605|gb|ADX17035.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623539|gb|EGE29884.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 180 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|15831679|ref|NP_310452.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. Sakai] gi|16129674|ref|NP_416233.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] gi|89108558|ref|AP_002338.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. W3110] gi|170019933|ref|YP_001724887.1| translation initiation factor IF-3 [Escherichia coli ATCC 8739] gi|215486937|ref|YP_002329368.1| translation initiation factor IF-3 [Escherichia coli O127:H6 str. E2348/69] gi|238900933|ref|YP_002926729.1| protein chain initiation factor IF-3 [Escherichia coli BW2952] gi|253773327|ref|YP_003036158.1| translation initiation factor IF-3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793335|ref|YP_003078172.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14359] gi|260844070|ref|YP_003221848.1| protein chain initiation factor IF-3 [Escherichia coli O103:H2 str. 12009] gi|260855584|ref|YP_003229475.1| protein chain initiation factor IF-3 [Escherichia coli O26:H11 str. 11368] gi|260868245|ref|YP_003234647.1| protein chain initiation factor IF-3 [Escherichia coli O111:H- str. 11128] gi|332279131|ref|ZP_08391544.1| chain initiation factor IF-3 [Shigella sp. D9] gi|67466073|sp|P0A707|IF3_ECOLI RecName: Full=Translation initiation factor IF-3; Contains: RecName: Full=Translation initiation factor IF-3, N-terminally processed; Contains: RecName: Full=Translation initiation factor IF-3S gi|67466074|sp|P0A708|IF3_ECOL6 RecName: Full=Translation initiation factor IF-3 gi|67466075|sp|P0A709|IF3_ECO57 RecName: Full=Translation initiation factor IF-3 gi|189028353|sp|B1IPL0|IF3_ECOLC RecName: Full=Translation initiation factor IF-3 gi|254803487|sp|B7USA1|IF3_ECO27 RecName: Full=Translation initiation factor IF-3 gi|259491505|sp|C4ZYI0|IF3_ECOBW RecName: Full=Translation initiation factor IF-3 gi|43067|emb|CAA23561.1| unnamed protein product [Escherichia coli] gi|1742797|dbj|BAA15485.1| protein chain initiation factor IF-3 [Escherichia coli str. K12 substr. W3110] gi|1788012|gb|AAC74788.1| protein chain initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] gi|13361892|dbj|BAB35848.1| protein chain initiation factor IF-3 [Escherichia coli O157:H7 str. Sakai] gi|169754861|gb|ACA77560.1| translation initiation factor IF-3 [Escherichia coli ATCC 8739] gi|209768838|gb|ACI82731.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768840|gb|ACI82732.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768842|gb|ACI82733.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768844|gb|ACI82734.1| protein chain initiation factor IF-3 [Escherichia coli] gi|209768846|gb|ACI82735.1| protein chain initiation factor IF-3 [Escherichia coli] gi|215265009|emb|CAS09395.1| protein chain initiation factor IF-3 [Escherichia coli O127:H6 str. E2348/69] gi|238863300|gb|ACR65298.1| protein chain initiation factor IF-3 [Escherichia coli BW2952] gi|242377441|emb|CAQ32193.1| protein chain initiation factor IF-3 [Escherichia coli BL21(DE3)] gi|253324371|gb|ACT28973.1| translation initiation factor IF-3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254592735|gb|ACT72096.1| protein chain initiation factor IF-3 [Escherichia coli O157:H7 str. TW14359] gi|257754233|dbj|BAI25735.1| protein chain initiation factor IF-3 [Escherichia coli O26:H11 str. 11368] gi|257759217|dbj|BAI30714.1| protein chain initiation factor IF-3 [Escherichia coli O103:H2 str. 12009] gi|257764601|dbj|BAI36096.1| protein chain initiation factor IF-3 [Escherichia coli O111:H- str. 11128] gi|260449159|gb|ACX39581.1| translation initiation factor IF-3 [Escherichia coli DH1] gi|315061023|gb|ADT75350.1| protein chain initiation factor IF-3 [Escherichia coli W] gi|315136358|dbj|BAJ43517.1| protein chain initiation factor IF-3 [Escherichia coli DH1] gi|323378406|gb|ADX50674.1| translation initiation factor IF-3 [Escherichia coli KO11] gi|332101483|gb|EGJ04829.1| chain initiation factor IF-3 [Shigella sp. D9] Length = 180 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|282877700|ref|ZP_06286515.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310] gi|281300272|gb|EFA92626.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310] Length = 232 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI P VC+++D K Y +K A E ++KQ +KE++ P Sbjct: 38 LDLARQQGVDLVEISPKAQPPVCRLVDYSKFLYQQKKRAKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK GFL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAQGFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|269218567|ref|ZP_06162421.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 848 str. F0332] gi|269211678|gb|EEZ78018.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 848 str. F0332] Length = 204 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQEA LDLVE+ + P V K++D K +Y + EAR+ Q +T IK +++ I Sbjct: 23 LRLAQEAGLDLVEVAPNSNPPVAKLMDYGKFKYESAQKVREARRNQSNTVIKSIRIGLKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL G KVK ++F+GRE ++G LL + E E+S I+ P Sbjct: 83 DENDYRTKKSQAERFLTGGDKVKFDLRFKGREQSRPEMGVRLLRGLAEELAELSTIEAAP 142 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 143 RAEGRNMSMVLAP 155 >gi|20138516|sp|Q9ACJ8|IF3_THET2 RecName: Full=Translation initiation factor IF-3 gi|75520532|sp|Q70YI5|IF3_THETH RecName: Full=Translation initiation factor IF-3 gi|134048675|sp|Q5SKU2|IF3_THET8 RecName: Full=Translation initiation factor IF-3 gi|13508846|emb|CAC35168.1| translation initiation factor-3 (IF3) [Thermus thermophilus HB27] gi|21901946|emb|CAD42331.1| translation initiation factor 3 [Thermus thermophilus] Length = 171 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 34 LRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E +++ ++ +P Sbjct: 94 DEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKP 153 Query: 121 KFEGRQMIMILSS 133 + GR M M+L+ Sbjct: 154 EMLGRDMNMLLAP 166 >gi|298244242|ref|ZP_06968048.1| translation initiation factor IF-3 [Ktedonobacter racemifer DSM 44963] gi|297551723|gb|EFH85588.1| translation initiation factor IF-3 [Ktedonobacter racemifer DSM 44963] Length = 216 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 86/132 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +LDLVE+ +V P VCK++D + +Y K EARK+QK +KE+++RP Sbjct: 45 LDIARERDLDLVEVSPNVVPPVCKLMDYGRFKYDQNKKENEARKRQKIVTVKEIRLRPRT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD++VK + I FL +G +VK+SV+FRG E+ H ++GR LL +I E I+ P Sbjct: 105 DDHDIEVKTRKIQQFLAEGDRVKVSVQFRGAEMRHPEIGRRLLDDIAEVLKGTVTIERTP 164 Query: 121 KFEGRQMIMILS 132 EGR M MILS Sbjct: 165 SMEGRMMSMILS 176 >gi|197301819|ref|ZP_03166889.1| hypothetical protein RUMLAC_00546 [Ruminococcus lactaris ATCC 29176] gi|197299259|gb|EDY33789.1| hypothetical protein RUMLAC_00546 [Ruminococcus lactaris ATCC 29176] Length = 164 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 82/132 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K +Y + EA+KKQ++ IKEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPGAKPPVCKIIDYGKYKYEQTRKEKEAKKKQRTVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + + +++ ++ Sbjct: 90 DTNDLNTKMNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAKMLEDVAVVEKAA 149 Query: 121 KFEGRQMIMILS 132 K EGR M M+L+ Sbjct: 150 KLEGRNMSMVLT 161 >gi|86747192|ref|YP_483688.1| translation initiation factor IF-3 [Rhodopseudomonas palustris HaA2] gi|86570220|gb|ABD04777.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris HaA2] Length = 145 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 101/134 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA +DLVEI +V+P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+I Sbjct: 12 IKMAMEAGMDLVEISPNVSPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMI 71 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + Sbjct: 72 DDHDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDA 131 Query: 121 KFEGRQMIMILSSK 134 +FEGRQ++M+L+ + Sbjct: 132 RFEGRQVVMVLAPR 145 >gi|312879875|ref|ZP_07739675.1| bacterial translation initiation factor 3 (bIF-3) [Aminomonas paucivorans DSM 12260] gi|310783166|gb|EFQ23564.1| bacterial translation initiation factor 3 (bIF-3) [Aminomonas paucivorans DSM 12260] Length = 229 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVE+ P VC+I+D K R+ QK +ARKKQK+ +KE+KMRP I Sbjct: 53 LQLAEERELDLVEVAPLAKPPVCRIMDYGKYRFQQQKRDKDARKKQKNQSVKEMKMRPKI 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD K+KA+ FL DG +VK+SV FRGRE+ D GRE+L ++ +++ EP Sbjct: 113 DVHDYTFKVKAVCAFLEDGHRVKVSVFFRGREMAFLDRGREVLDRVRRDIEGFGKVEMEP 172 Query: 121 KFEGRQMIMILSS 133 + EG M M+++ Sbjct: 173 RMEGSYMRMMIAP 185 >gi|146307005|ref|YP_001187470.1| translation initiation factor IF-3 [Pseudomonas mendocina ymp] gi|145575206|gb|ABP84738.1| bacterial translation initiation factor 3 (bIF-3) [Pseudomonas mendocina ymp] Length = 177 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LNAAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAIAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E+ ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEADLAELGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|224539836|ref|ZP_03680375.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus DSM 14838] gi|224518546|gb|EEF87651.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus DSM 14838] Length = 198 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEREVDLVEISPNAQPPVCRIVDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|290449|gb|AAA51467.1| initiation factor 3 [Escherichia coli] Length = 180 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESSP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|225574524|ref|ZP_03783134.1| hypothetical protein RUMHYD_02601 [Blautia hydrogenotrophica DSM 10507] gi|225038255|gb|EEG48501.1| hypothetical protein RUMHYD_02601 [Blautia hydrogenotrophica DSM 10507] Length = 177 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K +Y + + EARKKQK +KEV++ P ID + Sbjct: 46 AQEAGLDLVKIAPQAKPPVCKIIDYGKYKYELARKEKEARKKQKIIDVKEVRLSPNIDTN 105 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ A FL G +VK++++FRGRE+ H + +L + E+ +++ ++ PK E Sbjct: 106 DLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMHSSKHVLDDFAEQLKDVATVEKAPKVE 165 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 166 GRSMTMFLTEK 176 >gi|46198491|ref|YP_004158.1| translation initiation factor IF-3 [Thermus thermophilus HB27] gi|55980520|ref|YP_143817.1| translation initiation factor IF-3 [Thermus thermophilus HB8] gi|46196113|gb|AAS80531.1| bacterial protein translation initiation factor 3 (IF-3) [Thermus thermophilus HB27] gi|55771933|dbj|BAD70374.1| translation initiation factor 3 (IF-3) [Thermus thermophilus HB8] Length = 144 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLV + + P V +I+D K RY Q EARKK K T +K +K R I Sbjct: 7 LRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E +++ ++ +P Sbjct: 67 DEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKP 126 Query: 121 KFEGRQMIMILSS 133 + GR M M+L+ Sbjct: 127 EMLGRDMNMLLAP 139 >gi|323344264|ref|ZP_08084490.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269] gi|323094993|gb|EFZ37568.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269] Length = 230 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E+ +++ P Sbjct: 98 DEHDYQFKLKHAKEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|260597638|ref|YP_003210209.1| translation initiation factor IF-3 [Cronobacter turicensis z3032] gi|260216815|emb|CBA30299.1| Translation initiation factor IF-3 [Cronobacter turicensis z3032] Length = 180 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|148381086|ref|YP_001255627.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 3502] gi|148290570|emb|CAL84699.1| translation initiation factor IF-3 [Clostridium botulinum A str. ATCC 3502] Length = 173 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 81/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 39 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L + E+ E+S ++ PK Sbjct: 99 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILKSFYEKVEELSVMEKAPK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 159 LEGRNMIMILAPRKA 173 >gi|148544465|ref|YP_001271835.1| translation initiation factor 3 [Lactobacillus reuteri DSM 20016] gi|184153830|ref|YP_001842171.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112] gi|227363107|ref|ZP_03847242.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3] gi|325682787|ref|ZP_08162303.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A] gi|148531499|gb|ABQ83498.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus reuteri DSM 20016] gi|183225174|dbj|BAG25691.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112] gi|227071825|gb|EEI10113.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3] gi|324977137|gb|EGC14088.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A] Length = 170 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEEANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTITVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV+IS++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRISLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAP 163 >gi|317131311|ref|YP_004090625.1| translation initiation factor IF-3 [Ethanoligenens harbinense YUAN-3] gi|315469290|gb|ADU25894.1| translation initiation factor IF-3 [Ethanoligenens harbinense YUAN-3] Length = 190 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV+I P VC+I+D K R+ K EA+K Q+ IKE++M I Sbjct: 40 LRLAEEKNLDLVKIAPQAKPPVCRIMDYGKFRFEQAKKEKEAKKNQRVVEIKEIRMSLNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K FLR G +VK++V+FRGRE+ H +LG+ LL +S ++ +P Sbjct: 100 DTHDLETKAGHALQFLRSGDRVKVTVRFRGREMAHTELGKTLLGRFAALCEGVSSVEKQP 159 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M + L +K Sbjct: 160 KLEGRSMSLFLVAKPA 175 >gi|300726433|ref|ZP_07059881.1| translation initiation factor IF-3 [Prevotella bryantii B14] gi|299776281|gb|EFI72843.1| translation initiation factor IF-3 [Prevotella bryantii B14] Length = 208 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+++D K Y +K E ++KQ +KE++ P Sbjct: 41 LDLARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKRQKEMKQKQVKVEVKEIRFGPQT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 101 DEHDYQFKLKHAQEFLEEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 160 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K V Sbjct: 161 KLEGKKMFLYMAPKKV 176 >gi|197284913|ref|YP_002150785.1| translation initiation factor IF-3 [Proteus mirabilis HI4320] gi|238693142|sp|B4ETK7|IF3_PROMH RecName: Full=Translation initiation factor IF-3 gi|194682400|emb|CAR42256.1| translation initiation factor IF-3 [Proteus mirabilis HI4320] Length = 179 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K E +KKQK +KEVK RP Sbjct: 43 LEKAEEAGADLVEISPNAEPPVCRIMDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ I+E E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEMLNRIREDLDELASVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 NKIEGRQMIMVLAPKK 178 >gi|254498719|ref|ZP_05111435.1| truncated translation initiation factor IF-3 [Legionella drancourtii LLAP12] gi|254352047|gb|EET10866.1| truncated translation initiation factor IF-3 [Legionella drancourtii LLAP12] Length = 129 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 84/128 (65%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQDLG ++L I++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQDLGMKILERIQQDTADVAVVEQHAKREGRQLL 120 Query: 129 MILSSKCV 136 M+LS K Sbjct: 121 MVLSPKKT 128 >gi|288801329|ref|ZP_06406783.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299 str. F0039] gi|288331712|gb|EFC70196.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299 str. F0039] Length = 199 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 7 LELARQQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQAKVDIKEIRFGPQT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL G KV+ V FRGR I+ ++ G LL E ++++ P Sbjct: 67 DEHDYQFKLKHAKEFLNGGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYAKVEQLP 126 Query: 121 KFEGRQMIMILSSKCV 136 K +G++M + L+ K Sbjct: 127 KLDGKKMFLYLTPKKA 142 >gi|311279397|ref|YP_003941628.1| translation initiation factor IF-3 [Enterobacter cloacae SCF1] gi|308748592|gb|ADO48344.1| translation initiation factor IF-3 [Enterobacter cloacae SCF1] Length = 180 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|150398669|ref|YP_001329136.1| translation initiation factor IF-3 [Sinorhizobium medicae WSM419] gi|150030184|gb|ABR62301.1| initiation factor 3 [Sinorhizobium medicae WSM419] Length = 132 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 77/132 (58%), Positives = 100/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK IKE+KMRP ID Sbjct: 1 MADEAGLDLVEIAPNSDPPVCKILDLGKLKYANQKKAAEARKKQKIVEIKEIKMRPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +VK+KA++ F +G KVK+++KFRGRE+ HQ+LG +LL +K+ EI++++ EPK Sbjct: 61 HDYEVKMKAMNRFFEEGDKVKVTLKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKL 120 Query: 123 EGRQMIMILSSK 134 EGRQM+M+L+ K Sbjct: 121 EGRQMMMVLAPK 132 >gi|163757701|ref|ZP_02164790.1| translation initiation factor IF-3 protein [Hoeflea phototrophica DFL-43] gi|162285203|gb|EDQ35485.1| translation initiation factor IF-3 protein [Hoeflea phototrophica DFL-43] Length = 140 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 72/134 (53%), Positives = 102/134 (76%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI+S+ VCKI+DL KL+Y QK A EARKKQK+ +KE+KMRP I Sbjct: 7 LAMAEEAGLDLVEINSNGDVPVCKIVDLGKLKYQSQKKASEARKKQKTVEVKEIKMRPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VK++A++ F +G KVK++++FRGRE+ H +LG +LL +K+ EI++++ EP Sbjct: 67 DTHDYDVKMRAMNRFFDEGDKVKVTLRFRGREMAHMELGMKLLQKVKDDTVEIAKVEAEP 126 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ K Sbjct: 127 KLEGRQMMMVLAPK 140 >gi|160883805|ref|ZP_02064808.1| hypothetical protein BACOVA_01777 [Bacteroides ovatus ATCC 8483] gi|237716079|ref|ZP_04546560.1| translation initiation factor IF-3 [Bacteroides sp. D1] gi|262407691|ref|ZP_06084239.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_22] gi|294643799|ref|ZP_06721597.1| translation initiation factor IF-3 [Bacteroides ovatus SD CC 2a] gi|294808459|ref|ZP_06767212.1| translation initiation factor IF-3 [Bacteroides xylanisolvens SD CC 1b] gi|156110890|gb|EDO12635.1| hypothetical protein BACOVA_01777 [Bacteroides ovatus ATCC 8483] gi|229443726|gb|EEO49517.1| translation initiation factor IF-3 [Bacteroides sp. D1] gi|262354499|gb|EEZ03591.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_22] gi|292640888|gb|EFF59108.1| translation initiation factor IF-3 [Bacteroides ovatus SD CC 2a] gi|294444387|gb|EFG13101.1| translation initiation factor IF-3 [Bacteroides xylanisolvens SD CC 1b] Length = 203 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|153941432|ref|YP_001392414.1| translation initiation factor IF-3 [Clostridium botulinum F str. Langeland] gi|152937328|gb|ABS42826.1| translation initiation factor IF-3 [Clostridium botulinum F str. Langeland] Length = 184 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 50 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 110 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 169 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 170 LEGRNMIMILAPRKA 184 >gi|160889628|ref|ZP_02070631.1| hypothetical protein BACUNI_02054 [Bacteroides uniformis ATCC 8492] gi|270293970|ref|ZP_06200172.1| translation initiation factor IF-3 [Bacteroides sp. D20] gi|317479177|ref|ZP_07938314.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36] gi|156860620|gb|EDO54051.1| hypothetical protein BACUNI_02054 [Bacteroides uniformis ATCC 8492] gi|270275437|gb|EFA21297.1| translation initiation factor IF-3 [Bacteroides sp. D20] gi|316904665|gb|EFV26482.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36] Length = 200 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + LS K V Sbjct: 159 VLEGKRMTIQLSPKKV 174 >gi|319778288|ref|YP_004129201.1| Translation initiation factor 3 [Taylorella equigenitalis MCE9] gi|317108312|gb|ADU91058.1| Translation initiation factor 3 [Taylorella equigenitalis MCE9] Length = 142 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E + DLVEI + VC+++D K +Y QK EA+ KQK +KE+K RP Sbjct: 5 LIKAEEEDTDLVEIAPNADVPVCRLMDYGKFKYQEQKRLQEAKSKQKIVQVKEIKFRPGT 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + F+ DG K K++++FRGRE+ HQDLG ++L ++E G++ ++ P Sbjct: 65 DEGDYQVKLRNLKRFIEDGDKAKVTLRFRGREMAHQDLGMKVLERVREDLGDLITVESMP 124 Query: 121 KFEGRQMIMILSS 133 KFEGRQMIM+++ Sbjct: 125 KFEGRQMIMVVAP 137 >gi|194466647|ref|ZP_03072634.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23] gi|227543932|ref|ZP_03973981.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A] gi|300909681|ref|ZP_07127142.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112] gi|194453683|gb|EDX42580.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23] gi|227186083|gb|EEI66154.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A] gi|300893546|gb|EFK86905.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112] Length = 170 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+EANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEEANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTITVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV+IS++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRISLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAP 163 >gi|170726836|ref|YP_001760862.1| translation initiation factor IF-3 [Shewanella woodyi ATCC 51908] gi|259491513|sp|B1KG60|IF3_SHEWM RecName: Full=Translation initiation factor IF-3 gi|169812183|gb|ACA86767.1| translation initiation factor IF-3 [Shewanella woodyi ATCC 51908] Length = 180 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 89/134 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K+ E +KKQK +KE+K RP D Sbjct: 46 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSQKEQKKKQKIVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ ++ FL DG K K++++FRGRE+ HQ LG LL+ IK+ EI+ ++ PK Sbjct: 106 ENDYQVKLRNLNRFLDDGDKAKVTLRFRGREMAHQSLGMNLLNRIKDDLAEIAVVESFPK 165 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 166 MEGRQAVMVLAPKK 179 >gi|330445796|ref|ZP_08309448.1| protein chain initiation factor IF-3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489987|dbj|GAA03945.1| protein chain initiation factor IF-3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 129 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +K QK IKEVK RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKNQKQIQIKEVKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK EI+ + P + EGRQM Sbjct: 61 LRNLTRFLEEGNKGKVTLRFRGREMAHQGIGIELLNRIKSELEEIAVCESFPNRVEGRQM 120 Query: 128 IMILSSKC 135 M+L+ K Sbjct: 121 TMMLAPKK 128 >gi|317057703|ref|YP_004106170.1| translation initiation factor IF-3 [Ruminococcus albus 7] gi|315449972|gb|ADU23536.1| translation initiation factor IF-3 [Ruminococcus albus 7] Length = 174 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E +LDLV+I TP VCKI+D K + QK E RK QK IKE++M I Sbjct: 38 LKIAFEKDLDLVKIAPQATPPVCKIMDYGKFLFEQQKREKEQRKNQKVIEIKEIRMSSTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ FL+ G K+K+SV+FR R + H G ELL KE E+ +D Sbjct: 98 DTHDFDTKVNQAIKFLKGGDKLKVSVRFRKRTVAHPQFGEELLVKFKEAVSEVGVVDKPS 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR ++M ++ K Sbjct: 158 KMEGRSLVMFVAPKA 172 >gi|158523053|ref|YP_001530923.1| initiation factor 3 [Desulfococcus oleovorans Hxd3] gi|158511879|gb|ABW68846.1| initiation factor 3 [Desulfococcus oleovorans Hxd3] Length = 139 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ +V P VCKI+D + +Y K EA+KKQ S IKE+K+RP Sbjct: 5 IAAAEDVGLDLVEVSPNVDPPVCKIMDYGRYKYEQTKKQHEAKKKQASFQIKEIKVRPKT 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+ A+ FL KVK++V FRGREI G LL I ++ +++ ++ P Sbjct: 65 DTHDLNTKIGAMRKFLDRKDKVKVTVFFRGREITLSAKGMNLLQEIAQQVEDVAVVEHAP 124 Query: 121 KFEGRQMIMILSSKC 135 +FEGR + MIL+ K Sbjct: 125 RFEGRSLFMILAPKV 139 >gi|283785058|ref|YP_003364923.1| translation initiation factor if-3 [Citrobacter rodentium ICC168] gi|282948512|emb|CBG88101.1| translation initiation factor if-3 [Citrobacter rodentium ICC168] Length = 180 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|328479650|gb|EGF48828.1| translation initiation factor IF-3 [Lactobacillus rhamnosus MTCC 5462] Length = 162 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 85/132 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ANLD+V + + P V +I+D K R+ +QK +ARKKQK+ IKE+++ P I Sbjct: 31 LAIAEDANLDVVLVSPNAKPPVARIMDYGKFRFELQKKERDARKKQKTVTIKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +LK FL G KVK+SV+FRGR I H+DLGR++L + + +I+ ++ P Sbjct: 91 GEAGFNTRLKNATKFLNKGDKVKVSVRFRGRAITHKDLGRKVLEQMADAVKDIAAVETHP 150 Query: 121 KFEGRQMIMILS 132 K +GR M ++L+ Sbjct: 151 KMDGRSMFLMLA 162 >gi|325298802|ref|YP_004258719.1| Translation initiation factor IF-3 [Bacteroides salanitronis DSM 18170] gi|324318355|gb|ADY36246.1| Translation initiation factor IF-3 [Bacteroides salanitronis DSM 18170] Length = 195 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E + DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LRMAEEHDADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+ G KVK V F+GR I+ ++ G LL + ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQGGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVEQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + L+ K Sbjct: 159 LLEGKRMTIALAPKK 173 >gi|326201563|ref|ZP_08191434.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] gi|325988163|gb|EGD48988.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] Length = 173 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K + + K EARK QK IKEV++ P I+ Sbjct: 40 KLANSKNLDLVKIAPQGVPPVCKIMDYGKYMFELAKKEKEARKNQKIISIKEVRVSPSIE 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+DG KVK+SVKFRGRE+ + +G E+L +E ++ ++ PK Sbjct: 100 DHDFEFKVKNAYKFLKDGDKVKVSVKFRGREMHYTSIGNEILGKFEEAVKDVGTVEKRPK 159 Query: 122 FEGRQMIMILSSK 134 EG+ MIMIL+ K Sbjct: 160 LEGKSMIMILNPK 172 >gi|53712977|ref|YP_098969.1| translation initiation factor IF-3 [Bacteroides fragilis YCH46] gi|60681189|ref|YP_211333.1| translation initiation factor IF-3 [Bacteroides fragilis NCTC 9343] gi|253563045|ref|ZP_04840502.1| translation initiation factor IF-3 [Bacteroides sp. 3_2_5] gi|265763074|ref|ZP_06091642.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_16] gi|81315742|sp|Q5LEQ5|IF3_BACFN RecName: Full=Translation initiation factor IF-3 gi|81690705|sp|Q64VP1|IF3_BACFR RecName: Full=Translation initiation factor IF-3 gi|52215842|dbj|BAD48435.1| translation initiation factor IF-3 [Bacteroides fragilis YCH46] gi|60492623|emb|CAH07395.1| putative translation initiation factor IF-3 [Bacteroides fragilis NCTC 9343] gi|251946821|gb|EES87103.1| translation initiation factor IF-3 [Bacteroides sp. 3_2_5] gi|263255682|gb|EEZ27028.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_16] gi|301162678|emb|CBW22225.1| putative translation initiation factor IF-3 [Bacteroides fragilis 638R] Length = 203 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPKK 173 >gi|288574760|ref|ZP_06393117.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570501|gb|EFC92058.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 161 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + ++ LDLVE+ P VC+ILD K RY QK +ARKKQK+ +KE+KMRP I Sbjct: 10 LDLSAGKELDLVEVAPGAKPPVCRILDYGKFRYQQQKREKDARKKQKTQTLKEMKMRPKI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K KAI FL +G +VK+S+ FRGRE+ D G+E+L + + ++ +++ P Sbjct: 70 DEHDYNFKTKAIRSFLENGHRVKVSIFFRGREMAFLDRGKEVLDRVAKDCEDLGKMEGFP 129 Query: 121 KFEGRQMIMILSS 133 + EGR M M+++ Sbjct: 130 RMEGRYMRMMITP 142 >gi|226944148|ref|YP_002799221.1| translation initiation factor IF-3 [Azotobacter vinelandii DJ] gi|226719075|gb|ACO78246.1| translation initiation factor IF-3 [Azotobacter vinelandii DJ] Length = 177 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A+K QK IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQVAAAKKNQKQVQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLNDGDKAKVSLRFRGREMAHQELGMELLKRVENDLAEFGTVEQYP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|91974650|ref|YP_567309.1| translation initiation factor IF-3 [Rhodopseudomonas palustris BisB5] gi|91681106|gb|ABE37408.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas palustris BisB5] Length = 132 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 67/132 (50%), Positives = 99/132 (75%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI +V+P VCKI+D K +Y+ QK A EARKKQK IKE+K+RP+ID Sbjct: 1 MAMEAGMDLVEISPNVSPPVCKIMDYGKFKYSAQKKAAEARKKQKIVEIKEIKLRPMIDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+KA+ F +G KVKI++++RGRE+ HQ++G +LL +K EI++++ + +F Sbjct: 61 HDYDVKMKAMQRFFEEGDKVKITLRYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDARF 120 Query: 123 EGRQMIMILSSK 134 EGRQ++M+L+ + Sbjct: 121 EGRQVVMVLAPR 132 >gi|325475123|gb|EGC78309.1| translation initiation factor IF-3 [Treponema denticola F0402] Length = 194 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVE+ + P VCKI+D K R+ ++K +++K QK ++E++M+P I Sbjct: 56 VKMAAEAGLDLVEVAPTAKPPVCKIIDYGKYRFQMEKKLRDSKKNQKQQMMREIRMQPKI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 HDL+ K I FL G KVK++V+F GRE+ H +LG E+L+ + E+ E ++ Sbjct: 116 HDHDLEFKSSHIKKFLDGGDKVKVTVRFWGRELAHTELGYEVLNKVLEKLGGEEACTLEK 175 Query: 119 EPKFEGRQMIMILSSK 134 +P EGR M M LS K Sbjct: 176 KPAMEGRTMSMTLSPK 191 >gi|330503838|ref|YP_004380707.1| translation initiation factor IF-3 [Pseudomonas mendocina NK-01] gi|328918124|gb|AEB58955.1| translation initiation factor IF-3 [Pseudomonas mendocina NK-01] Length = 177 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K Q IKE+K RP Sbjct: 41 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAIAKKNQHQQQIKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL +++ E+ ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEDGDKAKVSLRFRGREMAHQELGMELLKRVEQDLIELGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|281423151|ref|ZP_06254064.1| translation initiation factor IF-3 [Prevotella oris F0302] gi|281402487|gb|EFB33318.1| translation initiation factor IF-3 [Prevotella oris F0302] Length = 231 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMAHQKGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|119510904|ref|ZP_01630027.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414] gi|119464432|gb|EAW45346.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414] Length = 177 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLV + P VC+I+D K ++ +K A EARKKQ + +KEVKMR I Sbjct: 43 LQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++K + FL+DG KVK +V FRGREI H DL LL + + + + P Sbjct: 103 EEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEHLLKRMAKDLEPLGELQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 163 KKEGRNMMMLISPKK 177 >gi|302381459|ref|YP_003817282.1| translation initiation factor IF-3 [Brevundimonas subvibrioides ATCC 15264] gi|302192087|gb|ADK99658.1| translation initiation factor IF-3 [Brevundimonas subvibrioides ATCC 15264] Length = 188 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 63/127 (49%), Positives = 91/127 (71%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV+I S+ P V KILD K R+ QK EARK+QK +KE+K+RP ID+HD +V Sbjct: 62 GMDLVQIVSTSEPPVAKILDYGKFRFQEQKKKAEARKRQKVVELKEIKLRPNIDIHDYEV 121 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F +G KVK++++FRGRE+ H +LG +LL+ ++ F EI++++ P+ EGRQM Sbjct: 122 KAKAMHRFFDEGDKVKVTLRFRGREMAHPELGMKLLNKVQADFDEIAKVEYAPRMEGRQM 181 Query: 128 IMILSSK 134 IMIL+ K Sbjct: 182 IMILAPK 188 >gi|167752343|ref|ZP_02424470.1| hypothetical protein ALIPUT_00587 [Alistipes putredinis DSM 17216] gi|167660584|gb|EDS04714.1| hypothetical protein ALIPUT_00587 [Alistipes putredinis DSM 17216] Length = 154 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDL+EI P VC+I D +K Y +K A E + Q IKE++ P Sbjct: 18 LKLADEMELDLIEISPKADPPVCRIADYQKFLYQQKKKAKELKANQAKVTIKEIRFGPQT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK + FL++G KVK V FRGR I+ ++ G LL E+++++ P Sbjct: 78 DDHDYNFKLKHAENFLKEGSKVKAYVFFRGRSIVFKEQGEILLLRFATDLEELAKVESMP 137 Query: 121 KFEGRQMIMILSSKC 135 K +G++M MIL+ K Sbjct: 138 KLDGKKMNMILAPKS 152 >gi|30410815|ref|NP_848539.1| translation initiation factor IF-3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654241|sp|P46243|IF3_BUCAP RecName: Full=Translation initiation factor IF-3 Length = 179 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVKI+++FRGRE+ HQ +G ++L+ +K E++ I+ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 SKIEGRQMIMVLAPKK 178 >gi|237731270|ref|ZP_04561751.1| translation initiation factor IF3 [Citrobacter sp. 30_2] gi|291085450|ref|ZP_06353131.2| translation initiation factor IF-3 [Citrobacter youngae ATCC 29220] gi|226906809|gb|EEH92727.1| translation initiation factor IF3 [Citrobacter sp. 30_2] gi|291071040|gb|EFE09149.1| translation initiation factor IF-3 [Citrobacter youngae ATCC 29220] Length = 147 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 10 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 70 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRDDLSELAVVESFP 129 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 130 TKIEGRQMIMVLAPKK 145 >gi|27904623|ref|NP_777749.1| translation initiation factor IF-3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427412|sp|P59446|IF3_BUCBP RecName: Full=Translation initiation factor IF-3 gi|27904020|gb|AAO26854.1| translation initiation factor IF-3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 181 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E +DLVEI + P VC+I++ K Y K+ E RKKQK IKE+K RP Sbjct: 45 LYKAEEVGMDLVEISPNSEPPVCRIMNYGKFLYEKSKSIKEQRKKQKVRNIKEIKFRPNT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + FL +G KVK++++FRGRE++HQ LG ++L+ IK E++ ++ P Sbjct: 105 DEGDYKVKLRNLVRFLEEGDKVKVTLRFRGREMVHQKLGIDVLNRIKSDLIELAVVEVFP 164 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIMIL+SK Sbjct: 165 SRVEGRQMIMILTSKK 180 >gi|222110647|ref|YP_002552911.1| translation initiation factor if-3 [Acidovorax ebreus TPSY] gi|221730091|gb|ACM32911.1| translation initiation factor IF-3 [Acidovorax ebreus TPSY] Length = 178 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ +++ G+ ++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLNRLRDDLGDTILVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|288928014|ref|ZP_06421861.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 317 str. F0108] gi|288330848|gb|EFC69432.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 317 str. F0108] Length = 223 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + P VC+I+D K Y +K+A E + KQ +KE++ P Sbjct: 38 LDMARSQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHAKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYNFKLKHAKEFLDAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + ++ K Sbjct: 158 ALEGKKMFLYIAPKKT 173 >gi|260911582|ref|ZP_05918167.1| translation initiation factor IF3 [Prevotella sp. oral taxon 472 str. F0295] gi|260634288|gb|EEX52393.1| translation initiation factor IF3 [Prevotella sp. oral taxon 472 str. F0295] Length = 223 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + P VC+I+D K Y +K+A E + KQ +KE++ P Sbjct: 38 LDMARSQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHAKEMKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYNFKLKHAKEFLDAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + ++ K Sbjct: 158 ALEGKKMFLYIAPKKA 173 >gi|289163682|ref|YP_003453820.1| Translation initiation factor IF-3 [Legionella longbeachae NSW150] gi|288856855|emb|CBJ10666.1| Translation initiation factor IF-3 [Legionella longbeachae NSW150] Length = 130 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 83/128 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L I++ E + ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERIQQDTAEFAIVEQHAKREGRQLL 120 Query: 129 MILSSKCV 136 M+LS K Sbjct: 121 MVLSPKKT 128 >gi|312113313|ref|YP_004010909.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC 17100] gi|311218442|gb|ADP69810.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC 17100] Length = 173 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQEA LDLVEI + V KI+D K ++ QK A EARKKQK+ +KE+K+RP I Sbjct: 40 LAKAQEAGLDLVEIAVNGEVPVTKIMDFGKYKFQAQKKAAEARKKQKTVEVKEIKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK+++I F +G KVK++++FRGRE+ HQD+G +LL +KE I++++ EP Sbjct: 100 DTNDYNVKMRSIKKFFEEGDKVKVTLRFRGREMAHQDIGMQLLLQVKEETTAIAKVELEP 159 Query: 121 KFEGRQMIMILSSK 134 + EGRQMIM+L+ + Sbjct: 160 RLEGRQMIMVLAPR 173 >gi|299140595|ref|ZP_07033733.1| translation initiation factor IF-3 [Prevotella oris C735] gi|298577561|gb|EFI49429.1| translation initiation factor IF-3 [Prevotella oris C735] Length = 231 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMAHQKGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|293446092|ref|ZP_06662514.1| translation initiation factor IF-3 [Escherichia coli B088] gi|291322922|gb|EFE62350.1| translation initiation factor IF-3 [Escherichia coli B088] Length = 152 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 75 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 134 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 135 TKIEGRQMIMVLAPKK 150 >gi|189461813|ref|ZP_03010598.1| hypothetical protein BACCOP_02479 [Bacteroides coprocola DSM 17136] gi|189431407|gb|EDV00392.1| hypothetical protein BACCOP_02479 [Bacteroides coprocola DSM 17136] Length = 191 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E + DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LKLAEEHDADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + LS K Sbjct: 159 LLEGKRMTISLSPKKA 174 >gi|15837339|ref|NP_298027.1| translation initiation factor IF-3 [Xylella fastidiosa 9a5c] gi|9105627|gb|AAF83547.1|AE003916_1 initiation factor IF-3 [Xylella fastidiosa 9a5c] Length = 159 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 23 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 83 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 142 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 143 RLEGRQMVMMVAPRK 157 >gi|294141073|ref|YP_003557051.1| translation initiation factor IF-3 [Shewanella violacea DSS12] gi|293327542|dbj|BAJ02273.1| translation initiation factor IF-3 [Shewanella violacea DSS12] Length = 158 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 90/134 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KEVK RP D Sbjct: 24 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKIVQVKEVKFRPGTD 83 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ ++ FL DG K K++++FRGRE+ HQ+LG +LL+ IK+ EI+ ++ PK Sbjct: 84 ENDYQVKLRNLNRFLTDGDKAKVTLRFRGREMAHQNLGMKLLNRIKDDLAEIAVVESFPK 143 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 144 MEGRQAVMVLAPKK 157 >gi|117923679|ref|YP_864296.1| translation initiation factor 3 [Magnetococcus sp. MC-1] gi|117607435|gb|ABK42890.1| bacterial translation initiation factor 3 (bIF-3) [Magnetococcus sp. MC-1] Length = 182 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQ LDLVE+ P VCKI+D K +Y ARK Q KEVK RP Sbjct: 44 LYRAQNVGLDLVEVAPEAKPPVCKIMDYTKYKYQKAVRERIARKNQVRIDTKEVKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VKL++I FL G KVK +++FRGRE+ HQDLG +L ++ ++ +++ EP Sbjct: 104 DTHDYEVKLRSIRKFLEGGNKVKCTMRFRGREMAHQDLGLVMLKKVESEVLDLGKVEQEP 163 Query: 121 KFEGRQMIMILSSKCV 136 K GRQ+ M+L+ + Sbjct: 164 KLLGRQITMMLAPNAL 179 >gi|52842919|ref|YP_096718.1| translational initiation factor IF-3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630030|gb|AAU28771.1| translational initiation factor IF-3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 129 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 55/128 (42%), Positives = 83/128 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLL 120 Query: 129 MILSSKCV 136 M+LS K Sbjct: 121 MVLSPKKT 128 >gi|293372833|ref|ZP_06619211.1| translation initiation factor IF-3 [Bacteroides ovatus SD CMC 3f] gi|292632208|gb|EFF50808.1| translation initiation factor IF-3 [Bacteroides ovatus SD CMC 3f] Length = 203 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEERELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|298373536|ref|ZP_06983525.1| translation initiation factor IF-3 [Bacteroidetes oral taxon 274 str. F0058] gi|298274588|gb|EFI16140.1| translation initiation factor IF-3 [Bacteroidetes oral taxon 274 str. F0058] Length = 153 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 76/134 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI + P VCKI+D +K Y ++K E + +KE++ P Sbjct: 17 LSRADDLGLDLVEISPNADPPVCKIVDYQKFLYQLKKKEKEVKANTVKVVVKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK F+ DG KVK SV FRGR IM ++ G ELL + +I++ D P Sbjct: 77 DEHDYNFKLKHARSFIEDGNKVKASVFFRGRSIMFKEQGEELLKRFVDDLEDIAKPDNTP 136 Query: 121 KFEGRQMIMILSSK 134 K EG++MI+ +S K Sbjct: 137 KLEGKRMILNISPK 150 >gi|157145990|ref|YP_001453309.1| translation initiation factor IF-3 [Citrobacter koseri ATCC BAA-895] gi|157083195|gb|ABV12873.1| hypothetical protein CKO_01744 [Citrobacter koseri ATCC BAA-895] Length = 144 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLAELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|146311381|ref|YP_001176455.1| translation initiation factor IF-3 [Enterobacter sp. 638] gi|145318257|gb|ABP60404.1| bacterial translation initiation factor 3 (bIF-3) [Enterobacter sp. 638] Length = 144 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E+ +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEESGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ P Sbjct: 67 DDGDYQVKLRSLVRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRDDLSELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 SKIEGRQMIMVLAPKK 142 >gi|868028|gb|AAC43606.1| integration host factor 3 [Buchnera aphidicola] gi|1098081|prf||2115235C integration host factor 3 Length = 178 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 42 LRKAEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG KVKI+++FRGRE+ HQ +G ++L+ +K E++ I+ P Sbjct: 102 DEGDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIESFP 161 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 162 SKIEGRQMIMVLAPKK 177 >gi|312886254|ref|ZP_07745868.1| bacterial translation initiation factor 3 (bIF-3) [Mucilaginibacter paludis DSM 18603] gi|311301279|gb|EFQ78334.1| bacterial translation initiation factor 3 (bIF-3) [Mucilaginibacter paludis DSM 18603] Length = 189 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI + P VCK++D K Y +K E + K T IKE++ P Sbjct: 52 LAIAEQQELDLVEISPNAVPPVCKVVDYNKFIYEQKKKLKEIKSNAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V F+GR I++++ G LL + ++ +++ P Sbjct: 112 DDHDFEFKLKHAIKFLEAGEKVRAYVHFKGRAIVYKEQGEILLLRFAQALEDVGKVEQLP 171 Query: 121 KFEGRQMIMILSSKC 135 K EG++M + ++ K Sbjct: 172 KLEGKRMFLTVTPKV 186 >gi|315924323|ref|ZP_07920546.1| translation initiation factor IF3 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622394|gb|EFV02352.1| translation initiation factor IF3 [Pseudoramibacter alactolyticus ATCC 23263] Length = 205 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 86/132 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E +LDLV++ P VCKILD K RY ++ EA+KKQK+ IKE++M ++ Sbjct: 59 KIADENDLDLVKVSPHAKPPVCKILDYGKFRYEEERRLKEAKKKQKAVSIKEIRMSVRVE 118 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+QVK K + FL G +VK++++FRGRE+ + + G+++L + +R E+ ++ PK Sbjct: 119 EHDIQVKAKNAEKFLMQGHRVKLTIRFRGREMAYTNQGKQVLLDFAKRLEEVGTVEKNPK 178 Query: 122 FEGRQMIMILSS 133 EGR M + L+ Sbjct: 179 LEGRNMSIFLTP 190 >gi|332878462|ref|ZP_08446183.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683557|gb|EGJ56433.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 214 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 72/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 39 LQMAEAQGVDLVEISPNAVPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVDVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAQGFLSDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSS 133 EG++M + ++ Sbjct: 159 VLEGKRMTIFIAP 171 >gi|317491931|ref|ZP_07950365.1| translation initiation factor IF-3 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920052|gb|EFV41377.1| translation initiation factor IF-3 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 138 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKATKEQKKKQKIVQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +KE E++ ++ P Sbjct: 61 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKEDLSELAVVESFP 120 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 121 TKIEGRQMIMVLAPKK 136 >gi|281420276|ref|ZP_06251275.1| translation initiation factor IF-3 [Prevotella copri DSM 18205] gi|281405771|gb|EFB36451.1| translation initiation factor IF-3 [Prevotella copri DSM 18205] Length = 228 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVEI + P VC+I+D K Y +K+A E ++KQ KE++ P Sbjct: 38 LELARQQELDLVEISPNAQPPVCRIVDYSKFLYQQKKHAKEMKQKQVKVETKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAMEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + +S K Sbjct: 158 KLEGKKMFLYMSPKKA 173 >gi|29427470|sp|Q8EER8|IF3_SHEON RecName: Full=Translation initiation factor IF-3 Length = 178 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 44 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 104 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAVVESFPK 163 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 164 MEGRQAIMVLAPKK 177 >gi|221194539|ref|ZP_03567596.1| translation initiation factor IF-3 [Atopobium rimae ATCC 49626] gi|221185443|gb|EEE17833.1| translation initiation factor IF-3 [Atopobium rimae ATCC 49626] Length = 160 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VCKILD K RY + A ARK Q +KE+K RP I Sbjct: 5 LKRAREHGMDLVEIAPNAEPPVCKILDYSKFRYEQDRKAKAARKNQVKIEVKEMKFRPKI 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D + K + FL+ G +VKI++ FRGRE+ H + GR +L + E + I+ +P Sbjct: 65 DVGDYETKKGHVLRFLKKGARVKITIMFRGREMAHPEQGRLVLDRLAEDLKPYATIEQKP 124 Query: 121 KFEGRQMIMILSS 133 EGR M M+++ Sbjct: 125 LMEGRNMHMLVAP 137 >gi|115375481|ref|ZP_01462741.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|115367524|gb|EAU66499.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 249 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVE++ P VCKI+D K +Y +K A EA+KKQ +KEVK+RP Sbjct: 40 LERAQSEGLDLVEVNPMAKPPVCKIMDYGKFKYEEKKKASEAKKKQVVVHLKEVKLRPKT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K++ + FL +G K K+++ FRGREI H++LG +L ++ + E++ ++ P Sbjct: 100 EEHDYEFKVRNVKRFLEEGNKAKVTIVFRGREITHKELGSAILDDVNKDLKEVAVVEQAP 159 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 160 RMEGRQMFMILAP 172 >gi|227530472|ref|ZP_03960521.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC 49540] gi|227349577|gb|EEJ39868.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC 49540] Length = 170 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + P+V +I+D K RY +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEDANLDLVLVAPKARPAVARIMDYGKYRYEMQKKEREARKKQKTVTVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV++S++FRGR I H+D+GR+++ + + +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRVSLRFRGRAITHKDIGRDMIERMAKETEDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAP 163 >gi|288963151|ref|YP_003453430.1| translation initiation factor IF-3 [Azospirillum sp. B510] gi|288915403|dbj|BAI76886.1| translation initiation factor IF-3 [Azospirillum sp. B510] Length = 154 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 56/123 (45%), Positives = 86/123 (69%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VE+ P VCKILD K R+ QK A EARKKQK +KE+K+RP ID HD VK+++ Sbjct: 32 VEVAPQADPPVCKILDYGKFRFEEQKKANEARKKQKIIELKEIKLRPNIDDHDYDVKMRS 91 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ +G KVK++++FRGRE+ HQDLG +L ++++ +I++++ P+ EGR M+M+L Sbjct: 92 AIRFIEEGDKVKMTMRFRGREMAHQDLGLNVLVRVRDQLQDIAKVEQMPRVEGRMMVMVL 151 Query: 132 SSK 134 + + Sbjct: 152 APR 154 >gi|333029962|ref|ZP_08458023.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM 18011] gi|332740559|gb|EGJ71041.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM 18011] Length = 189 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI P VC+I D K Y ++K E + KQ +KE++ P Sbjct: 54 LKMAEDRGLDLVEISPKAKPPVCRITDFSKFIYQLKKRQKEQKAKQAKVNVKEIRFGPQT 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KVK V FRGR I+ ++ G LL E +++D P Sbjct: 114 DDHDYNFKLKHAISFLEDGDKVKAFVFFRGRSIVFKEQGEVLLLRFANDLEEYAKVDQLP 173 Query: 121 KFEGRQMIMILSSKC 135 EG++MI++LS K Sbjct: 174 VLEGKRMILLLSPKK 188 >gi|319902629|ref|YP_004162357.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides helcogenes P 36-108] gi|319417660|gb|ADV44771.1| bacterial translation initiation factor 3 (bIF-3) [Bacteroides helcogenes P 36-108] Length = 204 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNADPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|307153320|ref|YP_003888704.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822] gi|306983548|gb|ADN15429.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822] Length = 177 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P VC+++D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 43 LRIAEEKELDLVLVSETANPPVCRVMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL + EI+ + P Sbjct: 103 DDHDYNVRVNQAQRFLKSGDKVKATITFRGREIQHANLAEELLQRMANDLQEIAEVQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 163 KKEGRNMMMLLSPKK 177 >gi|309389088|gb|ADO76968.1| bacterial translation initiation factor 3 (bIF-3) [Halanaerobium praevalens DSM 2228] Length = 183 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E +DLVE+ P VC+I+D K +Y K EA+K Q +KEV+M I Sbjct: 47 LDRAAEYGMDLVEVAPQANPPVCRIMDYGKYKYEQAKKEKEAKKNQNVMNVKEVQMGVKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK FL + KVK+ ++FRGRE+MH++LG +L+ + E+ +I +++ +P Sbjct: 107 EDHDFNVKLKQARRFLNNKDKVKVRIRFRGREMMHKELGYDLMDRLIEQTKDIGKVESKP 166 Query: 121 KFEGRQMIMILSS 133 K EGR M+M L+ Sbjct: 167 KMEGRNMMMFLTP 179 >gi|325295460|ref|YP_004281974.1| translation initiation factor IF-3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065908|gb|ADY73915.1| Translation initiation factor IF-3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 174 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E LDLVE+ + P VC+I+D K +Y QK EA+KKQK+ +K VK+RP Sbjct: 39 LQLAKEQGLDLVEVSPNANPPVCRIMDYGKYKYQQQKKMHEAKKKQKTIEVKTVKVRPRT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQV++K FL G KVK V FRGRE H +LG L I E +I+ I+ +P Sbjct: 99 DEHDLQVRIKQTRKFLEKGNKVKAVVMFRGREQAHIELGEAQLMKIYEAVQDIAEIEKKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 159 KKEGRDMIMILAPKK 173 >gi|82543880|ref|YP_407827.1| translation initiation factor IF-3 [Shigella boydii Sb227] gi|81245291|gb|ABB65999.1| protein chain initiation factor IF-3 [Shigella boydii Sb227] gi|320185859|gb|EFW60610.1| Translation initiation factor 3 [Shigella flexneri CDC 796-83] gi|332096328|gb|EGJ01329.1| translation initiation factor IF-3 [Shigella boydii 3594-74] Length = 144 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQ+ +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|317502973|ref|ZP_07961062.1| translation initiation factor IF3 [Prevotella salivae DSM 15606] gi|315665909|gb|EFV05487.1| translation initiation factor IF3 [Prevotella salivae DSM 15606] Length = 230 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDMARQNGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAREFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|194435149|ref|ZP_03067383.1| translation initiation factor IF-3 [Shigella dysenteriae 1012] gi|194416613|gb|EDX32748.1| translation initiation factor IF-3 [Shigella dysenteriae 1012] Length = 144 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|170768694|ref|ZP_02903147.1| translation initiation factor IF-3 [Escherichia albertii TW07627] gi|170122242|gb|EDS91173.1| translation initiation factor IF-3 [Escherichia albertii TW07627] Length = 144 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|329891068|ref|ZP_08269411.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC 11568] gi|328846369|gb|EGF95933.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC 11568] Length = 173 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 62/127 (48%), Positives = 88/127 (69%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLV+I ++ VCKILD K R+ QK EARK+QK +KE+K+RP ID HD V Sbjct: 47 GLDLVQIVANAETPVCKILDYGKHRFQEQKKKAEARKRQKVVELKEIKLRPNIDTHDYDV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F DG KVK++++FRGRE+ H +LG +L++ ++ F E ++++ PK EGRQM Sbjct: 107 KAKAMHRFFDDGDKVKVTIRFRGREMAHPELGMKLMNKVQADFEEEAKVEFAPKMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|104774348|ref|YP_619328.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514443|ref|YP_813349.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300813175|ref|ZP_07093549.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|103423429|emb|CAI98302.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093758|gb|ABJ58911.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|300495833|gb|EFK30981.1| translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325126143|gb|ADY85473.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 173 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFLRD-GCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|288924995|ref|ZP_06418931.1| translation initiation factor IF-3 [Prevotella buccae D17] gi|288338185|gb|EFC76535.1| translation initiation factor IF-3 [Prevotella buccae D17] Length = 221 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ IKE++ P Sbjct: 33 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEIKEIRFGPQT 92 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 93 DEHDYQFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 152 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K Sbjct: 153 KLEGKKMFLYMAPKKT 168 >gi|184155787|ref|YP_001844127.1| translation initiation factor IF-3 [Lactobacillus fermentum IFO 3956] gi|227515619|ref|ZP_03945668.1| translation initiation factor IF3 [Lactobacillus fermentum ATCC 14931] gi|260663496|ref|ZP_05864386.1| translation initiation factor IF-3 [Lactobacillus fermentum 28-3-CHN] gi|183227131|dbj|BAG27647.1| translation initiation factor IF-3 [Lactobacillus fermentum IFO 3956] gi|227086049|gb|EEI21361.1| translation initiation factor IF3 [Lactobacillus fermentum ATCC 14931] gi|260552037|gb|EEX25090.1| translation initiation factor IF-3 [Lactobacillus fermentum 28-3-CHN] Length = 169 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A LDLV + P+V +I+D K R+ +QK EARK QK+ +KE+++ P I Sbjct: 31 LQLAEDAGLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKNQKTVAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL + F+ G +V++S++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLGRVRKFIEKGDQVRVSLRFRGRAITHKDIGRDMIERMAEETKDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M + L+ Sbjct: 151 KMEGRSMFLTLAP 163 >gi|159030118|emb|CAO91010.1| infC [Microcystis aeruginosa PCC 7806] Length = 176 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + +P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 42 LRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQHTADIKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL+ + + +++ + P Sbjct: 102 DEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLEDVAEVQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 162 KKEGRNMMMMLSPKK 176 >gi|262275835|ref|ZP_06053644.1| translation initiation factor 3 [Grimontia hollisae CIP 101886] gi|262219643|gb|EEY70959.1| translation initiation factor 3 [Grimontia hollisae CIP 101886] Length = 159 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+++D K Y K A E +KKQK IKE+K RP Sbjct: 23 LRTAEEAGVDLVEISPNAEPPVCRVMDYGKFIYEKSKAAKEQKKKQKVVQIKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + F+ +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P Sbjct: 83 DVGDYQVKLRNLVRFIEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIASVESFP 142 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 143 SRIEGRQMIMVLAPKK 158 >gi|15605568|ref|NP_220354.1| translation initiation factor IF-3 [Chlamydia trachomatis D/UW-3/CX] gi|7387790|sp|O84840|IF3_CHLTR RecName: Full=Translation initiation factor IF-3 gi|6578116|gb|AAC68430.2| Initiation Factor 3 [Chlamydia trachomatis D/UW-3/CX] Length = 175 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGYKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 155 KLNGRSLICVIAPGTL 170 >gi|325685797|gb|EGD27870.1| translation initiation factor IF3 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 173 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFLRD-GCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|325578417|ref|ZP_08148552.1| translation initiation factor IF3 [Haemophilus parainfluenzae ATCC 33392] gi|301156312|emb|CBW15783.1| protein chain initiation factor IF-3 [Haemophilus parainfluenzae T3T1] gi|325160153|gb|EGC72282.1| translation initiation factor IF3 [Haemophilus parainfluenzae ATCC 33392] Length = 154 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 18 LDMAEQAALDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P Sbjct: 78 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLADISVVESAP 137 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 138 GKLEGRQAVMVLAPKK 153 >gi|28199782|ref|NP_780096.1| translation initiation factor IF-3 [Xylella fastidiosa Temecula1] gi|28057903|gb|AAO29745.1| initiation factor IF-3 [Xylella fastidiosa Temecula1] Length = 154 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 18 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 78 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 137 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 138 RLEGRQMVMMVAPRK 152 >gi|259503613|ref|ZP_05746515.1| initiation factor IF3 [Lactobacillus antri DSM 16041] gi|312868767|ref|ZP_07728959.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3] gi|259168437|gb|EEW52932.1| initiation factor IF3 [Lactobacillus antri DSM 16041] gi|311095753|gb|EFQ54005.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3] Length = 170 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + P+V +I+D K R+ +QK EARKKQK+ +KE+++ P I Sbjct: 31 LQLAEDANLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKKQKTVTVKEIRLSPSI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKLK + F+ G KV++S++FRGR I H+D+GR+++ + E +I+ + P Sbjct: 91 DTNDFNVKLKRVRKFIEKGDKVRVSLRFRGRAITHKDIGRDMIERMAEETSDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR + + L+ Sbjct: 151 KMEGRSIFLTLAP 163 >gi|325103181|ref|YP_004272835.1| bacterial translation initiation factor 3 (bIF-3) [Pedobacter saltans DSM 12145] gi|324972029|gb|ADY51013.1| bacterial translation initiation factor 3 (bIF-3) [Pedobacter saltans DSM 12145] Length = 181 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 74/136 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 44 LAMAEEQELDLVEISPNANPPVCRIIDYNKFIYEQKKKLKEIKANAKQTVIKEIRFGPNT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD Q KLK FL G KV+ V F+GR I++++ G LL + + +++ P Sbjct: 104 SDHDYQFKLKHAISFLEAGEKVRAYVHFKGRAIVYKEKGEILLLKFAQALEDYGKVELLP 163 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K Sbjct: 164 KLEGKRMFLTVAPKTT 179 >gi|213161900|ref|ZP_03347610.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423450|ref|ZP_03356433.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426330|ref|ZP_03359080.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582473|ref|ZP_03364299.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213619334|ref|ZP_03373160.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650866|ref|ZP_03380919.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852223|ref|ZP_03381755.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289809608|ref|ZP_06540237.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 144 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|15802130|ref|NP_288152.1| translation initiation factor IF-3 [Escherichia coli O157:H7 EDL933] gi|26247969|ref|NP_754009.1| translation initiation factor IF-3 [Escherichia coli CFT073] gi|62179923|ref|YP_216340.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|74311962|ref|YP_310381.1| translation initiation factor IF-3 [Shigella sonnei Ss046] gi|82777066|ref|YP_403415.1| translation initiation factor IF-3 [Shigella dysenteriae Sd197] gi|91210932|ref|YP_540918.1| translation initiation factor IF-3 [Escherichia coli UTI89] gi|110641839|ref|YP_669569.1| translation initiation factor IF-3 [Escherichia coli 536] gi|157156228|ref|YP_001463014.1| translation initiation factor IF-3 [Escherichia coli E24377A] gi|157161180|ref|YP_001458498.1| translation initiation factor IF-3 [Escherichia coli HS] gi|161503558|ref|YP_001570670.1| translation initiation factor IF-3 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|168263847|ref|ZP_02685820.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168749465|ref|ZP_02774487.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4113] gi|168756719|ref|ZP_02781726.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4401] gi|168762218|ref|ZP_02787225.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4501] gi|168770479|ref|ZP_02795486.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4486] gi|168774981|ref|ZP_02799988.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4196] gi|168782133|ref|ZP_02807140.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4076] gi|168788114|ref|ZP_02813121.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC869] gi|168800101|ref|ZP_02825108.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC508] gi|170682199|ref|YP_001743531.1| translation initiation factor IF-3 [Escherichia coli SMS-3-5] gi|187732581|ref|YP_001880508.1| translation initiation factor IF-3 [Shigella boydii CDC 3083-94] gi|188493870|ref|ZP_03001140.1| translation initiation factor IF-3 [Escherichia coli 53638] gi|191171642|ref|ZP_03033189.1| translation initiation factor IF-3 [Escherichia coli F11] gi|193065779|ref|ZP_03046842.1| translation initiation factor IF-3 [Escherichia coli E22] gi|193068914|ref|ZP_03049873.1| translation initiation factor IF-3 [Escherichia coli E110019] gi|194428563|ref|ZP_03061102.1| translation initiation factor IF-3 [Escherichia coli B171] gi|194438479|ref|ZP_03070568.1| translation initiation factor IF-3 [Escherichia coli 101-1] gi|194444222|ref|YP_002040591.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450157|ref|YP_002045341.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469320|ref|ZP_03075304.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736284|ref|YP_002114351.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195937402|ref|ZP_03082784.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4024] gi|197251897|ref|YP_002146703.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265146|ref|ZP_03165220.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244931|ref|YP_002215792.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389682|ref|ZP_03216293.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927642|ref|ZP_03218843.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352943|ref|YP_002226744.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857159|ref|YP_002243810.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208810461|ref|ZP_03252337.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4206] gi|208816560|ref|ZP_03257680.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4045] gi|208821686|ref|ZP_03262006.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4042] gi|209399706|ref|YP_002270788.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4115] gi|209919077|ref|YP_002293161.1| translation initiation factor IF-3 [Escherichia coli SE11] gi|217328908|ref|ZP_03444989.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14588] gi|227885860|ref|ZP_04003665.1| translation initiation factor IF-3 [Escherichia coli 83972] gi|237705667|ref|ZP_04536148.1| translation initiation factor IF-3 [Escherichia sp. 3_2_53FAA] gi|238910850|ref|ZP_04654687.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|254161778|ref|YP_003044886.1| translation initiation factor IF-3 [Escherichia coli B str. REL606] gi|261227790|ref|ZP_05942071.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. FRIK2000] gi|261258045|ref|ZP_05950578.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. FRIK966] gi|291282898|ref|YP_003499716.1| Translation initiation factor IF-3 [Escherichia coli O55:H7 str. CB9615] gi|293405217|ref|ZP_06649209.1| translation initiation factor IF-3 [Escherichia coli FVEC1412] gi|293410034|ref|ZP_06653610.1| translation initiation factor IF-3 [Escherichia coli B354] gi|293415036|ref|ZP_06657679.1| translation initiation factor IF-3 [Escherichia coli B185] gi|297518985|ref|ZP_06937371.1| translation initiation factor IF-3 [Escherichia coli OP50] gi|298380860|ref|ZP_06990459.1| translation initiation factor IF-3 [Escherichia coli FVEC1302] gi|300818357|ref|ZP_07098567.1| translation initiation factor IF-3 [Escherichia coli MS 107-1] gi|300821408|ref|ZP_07101555.1| translation initiation factor IF-3 [Escherichia coli MS 119-7] gi|300898494|ref|ZP_07116831.1| translation initiation factor IF-3 [Escherichia coli MS 198-1] gi|300904574|ref|ZP_07122411.1| translation initiation factor IF-3 [Escherichia coli MS 84-1] gi|300917720|ref|ZP_07134369.1| translation initiation factor IF-3 [Escherichia coli MS 115-1] gi|300924760|ref|ZP_07140702.1| translation initiation factor IF-3 [Escherichia coli MS 182-1] gi|300930806|ref|ZP_07146178.1| translation initiation factor IF-3 [Escherichia coli MS 187-1] gi|300938948|ref|ZP_07153649.1| translation initiation factor IF-3 [Escherichia coli MS 21-1] gi|300951318|ref|ZP_07165162.1| translation initiation factor IF-3 [Escherichia coli MS 116-1] gi|300958607|ref|ZP_07170732.1| translation initiation factor IF-3 [Escherichia coli MS 175-1] gi|300987615|ref|ZP_07178287.1| translation initiation factor IF-3 [Escherichia coli MS 200-1] gi|300994419|ref|ZP_07180924.1| translation initiation factor IF-3 [Escherichia coli MS 45-1] gi|301017727|ref|ZP_07182382.1| translation initiation factor IF-3 [Escherichia coli MS 69-1] gi|301050945|ref|ZP_07197794.1| translation initiation factor IF-3 [Escherichia coli MS 185-1] gi|301303994|ref|ZP_07210112.1| translation initiation factor IF-3 [Escherichia coli MS 124-1] gi|301327448|ref|ZP_07220683.1| translation initiation factor IF-3 [Escherichia coli MS 78-1] gi|301647909|ref|ZP_07247686.1| translation initiation factor IF-3 [Escherichia coli MS 146-1] gi|307310712|ref|ZP_07590358.1| translation initiation factor IF-3 [Escherichia coli W] gi|309793488|ref|ZP_07687915.1| translation initiation factor IF-3 [Escherichia coli MS 145-7] gi|331642315|ref|ZP_08343450.1| translation initiation factor IF-3 [Escherichia coli H736] gi|331647209|ref|ZP_08348303.1| translation initiation factor IF-3 [Escherichia coli M605] gi|331653118|ref|ZP_08354123.1| translation initiation factor IF-3 [Escherichia coli M718] gi|331658464|ref|ZP_08359415.1| translation initiation factor IF-3 [Escherichia coli TA206] gi|331663197|ref|ZP_08364107.1| translation initiation factor IF-3 [Escherichia coli TA143] gi|331668403|ref|ZP_08369251.1| translation initiation factor IF-3 [Escherichia coli TA271] gi|331673268|ref|ZP_08374036.1| translation initiation factor IF-3 [Escherichia coli TA280] gi|331677591|ref|ZP_08378266.1| translation initiation factor IF-3 [Escherichia coli H591] gi|331683224|ref|ZP_08383825.1| translation initiation factor IF-3 [Escherichia coli H299] gi|25299583|pir||E85780 Initiation factor IF-3 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12515732|gb|AAG56705.1|AE005395_1 Initiation factor IF-3 [Escherichia coli O157:H7 str. EDL933] gi|26108372|gb|AAN80574.1|AE016761_149 Translation initiation factor IF-3 [Escherichia coli CFT073] gi|16419853|gb|AAL20259.1| protein chain initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127556|gb|AAX65259.1| Translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|73855439|gb|AAZ88146.1| protein chain initiation factor IF-3 [Shigella sonnei Ss046] gi|81241214|gb|ABB61924.1| protein chain initiation factor IF-3 [Shigella dysenteriae Sd197] gi|91072506|gb|ABE07387.1| protein chain initiation factor IF-3 [Escherichia coli UTI89] gi|110343431|gb|ABG69668.1| translation initiation factor IF-3 [Escherichia coli 536] gi|157066860|gb|ABV06115.1| translation initiation factor IF-3 [Escherichia coli HS] gi|157078258|gb|ABV17966.1| translation initiation factor IF-3 [Escherichia coli E24377A] gi|160864905|gb|ABX21528.1| hypothetical protein SARI_01636 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|170519917|gb|ACB18095.1| translation initiation factor IF-3 [Escherichia coli SMS-3-5] gi|187429573|gb|ACD08847.1| translation initiation factor IF-3 [Shigella boydii CDC 3083-94] gi|187769481|gb|EDU33325.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4196] gi|188016209|gb|EDU54331.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4113] gi|188489069|gb|EDU64172.1| translation initiation factor IF-3 [Escherichia coli 53638] gi|189000283|gb|EDU69269.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4076] gi|189356129|gb|EDU74548.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4401] gi|189360632|gb|EDU79051.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4486] gi|189367510|gb|EDU85926.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4501] gi|189372040|gb|EDU90456.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC869] gi|189377612|gb|EDU96028.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC508] gi|190907972|gb|EDV67564.1| translation initiation factor IF-3 [Escherichia coli F11] gi|192926551|gb|EDV81182.1| translation initiation factor IF-3 [Escherichia coli E22] gi|192957709|gb|EDV88153.1| translation initiation factor IF-3 [Escherichia coli E110019] gi|194402885|gb|ACF63107.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408461|gb|ACF68680.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194413441|gb|EDX29724.1| translation initiation factor IF-3 [Escherichia coli B171] gi|194422489|gb|EDX38487.1| translation initiation factor IF-3 [Escherichia coli 101-1] gi|194455684|gb|EDX44523.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711786|gb|ACF91007.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195182908|dbj|BAG66478.1| protein chain initiation factor IF-3 [Escherichia coli O111:H-] gi|197215600|gb|ACH52997.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243401|gb|EDY26021.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939447|gb|ACH76780.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602127|gb|EDZ00673.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322984|gb|EDZ08180.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272724|emb|CAR37640.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205347573|gb|EDZ34204.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708962|emb|CAR33292.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208724977|gb|EDZ74684.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4206] gi|208730903|gb|EDZ79592.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4045] gi|208741809|gb|EDZ89491.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4042] gi|209161106|gb|ACI38539.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. EC4115] gi|209912336|dbj|BAG77410.1| translation initiation factor IF-3 [Escherichia coli SE11] gi|217318255|gb|EEC26682.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. TW14588] gi|222033473|emb|CAP76214.1| Translation initiation factor IF-3 [Escherichia coli LF82] gi|226900424|gb|EEH86683.1| translation initiation factor IF-3 [Escherichia sp. 3_2_53FAA] gi|227837433|gb|EEJ47899.1| translation initiation factor IF-3 [Escherichia coli 83972] gi|253973679|gb|ACT39350.1| translation initiation factor IF-3 [Escherichia coli B str. REL606] gi|253977873|gb|ACT43543.1| translation initiation factor IF-3 [Escherichia coli BL21(DE3)] gi|261246543|emb|CBG24353.1| Translation initiation factor IF-3. Translation initiation factor IF-3, chloroplast [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|281178788|dbj|BAI55118.1| translation initiation factor IF-3 [Escherichia coli SE15] gi|284921638|emb|CBG34710.1| Translation initiation factor IF-3 [Escherichia coli 042] gi|290762771|gb|ADD56732.1| Translation initiation factor IF-3 [Escherichia coli O55:H7 str. CB9615] gi|291427425|gb|EFF00452.1| translation initiation factor IF-3 [Escherichia coli FVEC1412] gi|291432684|gb|EFF05663.1| translation initiation factor IF-3 [Escherichia coli B185] gi|291470502|gb|EFF12986.1| translation initiation factor IF-3 [Escherichia coli B354] gi|294491077|gb|ADE89833.1| translation initiation factor IF-3 [Escherichia coli IHE3034] gi|298278302|gb|EFI19816.1| translation initiation factor IF-3 [Escherichia coli FVEC1302] gi|300297399|gb|EFJ53784.1| translation initiation factor IF-3 [Escherichia coli MS 185-1] gi|300306095|gb|EFJ60615.1| translation initiation factor IF-3 [Escherichia coli MS 200-1] gi|300314732|gb|EFJ64516.1| translation initiation factor IF-3 [Escherichia coli MS 175-1] gi|300357846|gb|EFJ73716.1| translation initiation factor IF-3 [Escherichia coli MS 198-1] gi|300400019|gb|EFJ83557.1| translation initiation factor IF-3 [Escherichia coli MS 69-1] gi|300403487|gb|EFJ87025.1| translation initiation factor IF-3 [Escherichia coli MS 84-1] gi|300406265|gb|EFJ89803.1| translation initiation factor IF-3 [Escherichia coli MS 45-1] gi|300415121|gb|EFJ98431.1| translation initiation factor IF-3 [Escherichia coli MS 115-1] gi|300419048|gb|EFK02359.1| translation initiation factor IF-3 [Escherichia coli MS 182-1] gi|300449415|gb|EFK13035.1| translation initiation factor IF-3 [Escherichia coli MS 116-1] gi|300456147|gb|EFK19640.1| translation initiation factor IF-3 [Escherichia coli MS 21-1] gi|300461364|gb|EFK24857.1| translation initiation factor IF-3 [Escherichia coli MS 187-1] gi|300525911|gb|EFK46980.1| translation initiation factor IF-3 [Escherichia coli MS 119-7] gi|300528997|gb|EFK50059.1| translation initiation factor IF-3 [Escherichia coli MS 107-1] gi|300840791|gb|EFK68551.1| translation initiation factor IF-3 [Escherichia coli MS 124-1] gi|300845960|gb|EFK73720.1| translation initiation factor IF-3 [Escherichia coli MS 78-1] gi|301073966|gb|EFK88772.1| translation initiation factor IF-3 [Escherichia coli MS 146-1] gi|301157871|emb|CBW17365.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|306908890|gb|EFN39386.1| translation initiation factor IF-3 [Escherichia coli W] gi|307553739|gb|ADN46514.1| translation initiation factor IF-3 [Escherichia coli ABU 83972] gi|307626795|gb|ADN71099.1| translation initiation factor IF-3 [Escherichia coli UM146] gi|308123075|gb|EFO60337.1| translation initiation factor IF-3 [Escherichia coli MS 145-7] gi|309701941|emb|CBJ01254.1| Translation initiation factor IF-3 [Escherichia coli ETEC H10407] gi|312912319|dbj|BAJ36293.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|312946319|gb|ADR27146.1| translation initiation factor IF-3 [Escherichia coli O83:H1 str. NRG 857C] gi|315257477|gb|EFU37445.1| translation initiation factor IF-3 [Escherichia coli MS 85-1] gi|315286433|gb|EFU45868.1| translation initiation factor IF-3 [Escherichia coli MS 110-3] gi|315290479|gb|EFU49853.1| translation initiation factor IF-3 [Escherichia coli MS 153-1] gi|315299749|gb|EFU58989.1| translation initiation factor IF-3 [Escherichia coli MS 16-3] gi|320086186|emb|CBY95960.1| Translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|320657808|gb|EFX25570.1| translation initiation factor IF-3 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658383|gb|EFX26077.1| translation initiation factor IF-3 [Escherichia coli O55:H7 str. USDA 5905] gi|320668280|gb|EFX35107.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. LSU-61] gi|322616719|gb|EFY13628.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620022|gb|EFY16895.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622332|gb|EFY19177.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627856|gb|EFY24646.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633046|gb|EFY29789.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636708|gb|EFY33411.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641266|gb|EFY37907.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645255|gb|EFY41784.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650196|gb|EFY46610.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655770|gb|EFY52072.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660096|gb|EFY56335.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665337|gb|EFY61525.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669595|gb|EFY65743.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673521|gb|EFY69623.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677447|gb|EFY73511.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679888|gb|EFY75927.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687360|gb|EFY83332.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714389|gb|EFZ05960.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323192478|gb|EFZ77708.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198667|gb|EFZ83768.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204095|gb|EFZ89109.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208714|gb|EFZ93652.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210227|gb|EFZ95126.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217690|gb|EGA02405.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220244|gb|EGA04699.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223490|gb|EGA07816.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229492|gb|EGA13615.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232715|gb|EGA16811.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240246|gb|EGA24290.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242766|gb|EGA26787.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249082|gb|EGA33001.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254417|gb|EGA38234.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255601|gb|EGA39357.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260122|gb|EGA43747.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267114|gb|EGA50599.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271562|gb|EGA54983.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323937320|gb|EGB33599.1| translation initiation protein IF-3 [Escherichia coli E1520] gi|323940616|gb|EGB36807.1| translation initiation protein IF-3 [Escherichia coli E482] gi|323948092|gb|EGB44083.1| translation initiation protein IF-3 [Escherichia coli H120] gi|323952225|gb|EGB48098.1| translation initiation protein IF-3 [Escherichia coli H252] gi|323956619|gb|EGB52357.1| translation initiation protein IF-3 [Escherichia coli H263] gi|323962101|gb|EGB57697.1| translation initiation protein IF-3 [Escherichia coli H489] gi|323968487|gb|EGB63893.1| translation initiation protein IF-3 [Escherichia coli M863] gi|323973903|gb|EGB69075.1| translation initiation protein IF-3 [Escherichia coli TA007] gi|323978099|gb|EGB73185.1| translation initiation protein IF-3 [Escherichia coli TW10509] gi|324007093|gb|EGB76312.1| translation initiation factor IF-3 [Escherichia coli MS 57-2] gi|324011502|gb|EGB80721.1| translation initiation factor IF-3 [Escherichia coli MS 60-1] gi|324016471|gb|EGB85690.1| translation initiation factor IF-3 [Escherichia coli MS 117-3] gi|324113469|gb|EGC07444.1| translation initiation protein IF-3 [Escherichia fergusonii B253] gi|324119203|gb|EGC13091.1| translation initiation protein IF-3 [Escherichia coli E1167] gi|326628017|gb|EGE34360.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|331039113|gb|EGI11333.1| translation initiation factor IF-3 [Escherichia coli H736] gi|331043992|gb|EGI16128.1| translation initiation factor IF-3 [Escherichia coli M605] gi|331049216|gb|EGI21288.1| translation initiation factor IF-3 [Escherichia coli M718] gi|331054420|gb|EGI26440.1| translation initiation factor IF-3 [Escherichia coli TA206] gi|331058996|gb|EGI30973.1| translation initiation factor IF-3 [Escherichia coli TA143] gi|331063597|gb|EGI35508.1| translation initiation factor IF-3 [Escherichia coli TA271] gi|331069466|gb|EGI40853.1| translation initiation factor IF-3 [Escherichia coli TA280] gi|331074051|gb|EGI45371.1| translation initiation factor IF-3 [Escherichia coli H591] gi|331079439|gb|EGI50636.1| translation initiation factor IF-3 [Escherichia coli H299] gi|332988222|gb|AEF07205.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] gi|333006571|gb|EGK26071.1| translation initiation factor IF-3 [Shigella flexneri K-272] gi|333018790|gb|EGK38083.1| translation initiation factor IF-3 [Shigella flexneri K-227] Length = 144 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|269139161|ref|YP_003295862.1| translation initiation factor IF-3 [Edwardsiella tarda EIB202] gi|267984822|gb|ACY84651.1| translation initiation factor IF-3 [Edwardsiella tarda EIB202] gi|304559085|gb|ADM41749.1| Translation initiation factor 3 [Edwardsiella tarda FL6-60] Length = 152 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK IKE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQIKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 135 SKIEGRQMIMVLAPKK 150 >gi|152987833|ref|YP_001347871.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PA7] gi|150962991|gb|ABR85016.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PA7] Length = 177 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 41 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|145298934|ref|YP_001141775.1| translation initiation factor IF-3 [Aeromonas salmonicida subsp. salmonicida A449] gi|142851706|gb|ABO90027.1| translation initiation factor IF-3 [Aeromonas salmonicida subsp. salmonicida A449] Length = 182 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP Sbjct: 46 LNLALEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQDLG ++L +K E++ ++ P Sbjct: 106 DEGDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQDLGIKVLERVKNDLEELAVVESFP 165 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 166 KVEGRQAVMVLAPKK 180 >gi|303237190|ref|ZP_07323760.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN] gi|302482577|gb|EFL45602.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN] Length = 228 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LDIARKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL DG KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYQFKLKHAQEFLNDGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPKKT 173 >gi|332969048|gb|EGK08088.1| translation initiation factor IF3 [Kingella kingae ATCC 23330] Length = 155 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 LAMAEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG KVKI+++FRGRE+ HQ+LG +LL IK E +++ P Sbjct: 80 DDGDYNIKMRKIREFLGDGDKVKITLRFRGREMAHQELGAQLLERIKAELAEEGQVEQFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 140 KLEGRQMVMMVAPKK 154 >gi|124516422|gb|EAY57930.1| translation initiation factor 3 (IF-3) [Leptospirillum rubarum] Length = 175 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E DLVE+ + P VCK++D K Y K ++ QKS IKEVK RP I Sbjct: 18 IKKAEEQGFDLVEVSPTAKPPVCKMMDFGKYMYEQSKKVHAMKQHQKSGQIKEVKFRPHI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K+ + FL DG K KIS+ FRGRE++H ++G+ELL I ++ ++ P Sbjct: 78 NEHDLETKINYVQRFLEDGNKAKISMMFRGREMIHTEVGKELLQKIIVATEGVAVLEVPP 137 Query: 121 KFEGRQMIMILSS 133 + EG M M L+ Sbjct: 138 RMEGSNMTMTLAP 150 >gi|330995386|ref|ZP_08319296.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT 11841] gi|329575881|gb|EGG57405.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT 11841] Length = 214 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+ +DLVEI + P VC+++D K Y +K E + KQ +KE++ P Sbjct: 39 LQMAEAQGVDLVEISPNAVPPVCRLIDYSKFLYQQKKRQKEMKAKQVKVDVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAQGFLSDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + ++ K Sbjct: 159 VLEGKRMTIFIAPKK 173 >gi|56413680|ref|YP_150755.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|81677884|sp|Q5PH88|IF3_SALPA RecName: Full=Translation initiation factor IF-3 gi|56127937|gb|AAV77443.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 180 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKTEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|288802818|ref|ZP_06408255.1| translation initiation factor IF-3 [Prevotella melaninogenica D18] gi|288334635|gb|EFC73073.1| translation initiation factor IF-3 [Prevotella melaninogenica D18] Length = 219 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 31 LELAQREGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 91 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFSNDLEELAKVEQLP 150 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 151 KLEGKKMFLYLAPKKA 166 >gi|313124183|ref|YP_004034442.1| translation initiation factor if-3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280746|gb|ADQ61465.1| Translation initiation factor IF-3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 173 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V KILD K R+ QK E+RK K +KE+++ P I Sbjct: 31 LRQASDAGLDLTLISPNAKPPVAKILDYGKYRFEQQKKLKESRKNSKQVSVKEIRLSPAI 90 Query: 61 DLHDLQVKLKAIDGFLRD-GCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK FL G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 91 EGNDFETKLKHARKFLEKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEETSDIAVVTSR 150 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQM ++LS K Sbjct: 151 PKMEGRQMFLMLSPKS 166 >gi|116050733|ref|YP_790446.1| translation initiation factor IF-3 [Pseudomonas aeruginosa UCBPP-PA14] gi|218891077|ref|YP_002439943.1| translation initiation factor IF-3 [Pseudomonas aeruginosa LESB58] gi|254235721|ref|ZP_04929044.1| translation initiation factor IF-3 [Pseudomonas aeruginosa C3719] gi|296388794|ref|ZP_06878269.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PAb1] gi|115585954|gb|ABJ11969.1| translation initiation factor IF-3 [Pseudomonas aeruginosa UCBPP-PA14] gi|126167652|gb|EAZ53163.1| translation initiation factor IF-3 [Pseudomonas aeruginosa C3719] gi|218771302|emb|CAW27067.1| translation initiation factor IF-3 [Pseudomonas aeruginosa LESB58] Length = 177 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 41 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 161 KLEGRQLMMVIAPKK 175 >gi|331701569|ref|YP_004398528.1| translation initiation factor IF-3 [Lactobacillus buchneri NRRL B-30929] gi|329128912|gb|AEB73465.1| Translation initiation factor IF-3 [Lactobacillus buchneri NRRL B-30929] Length = 173 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 35 LQLAEDADLDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++S++F+GR I H+D+GR++L + +++ + P Sbjct: 95 DVNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKDIGRKVLDRMAAETADVATVTQRP 154 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 155 KMDGRSMFLMLSPK 168 >gi|295320404|gb|ADG00782.1| translation initiation factor IF-3 [Clostridium botulinum F str. 230613] Length = 164 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNHGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+++K FL G KVK++V+FRGRE + G ++L++ E+ E ++ PK Sbjct: 90 AHDIEIKANNARKFLNAGNKVKVTVRFRGREADYSFKGNKILNSFYEKVEEAGAMEKAPK 149 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ + Sbjct: 150 LEGRNMIMILAPRKA 164 >gi|291519542|emb|CBK74763.1| bacterial translation initiation factor 3 (bIF-3) [Butyrivibrio fibrisolvens 16/4] Length = 165 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 80/134 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + LDLV+I P VCKI+D K RY + EA+KKQ +KE++M P ID Sbjct: 31 KLADDEGLDLVKISPKANPPVCKIVDYGKYRYEQARREKEAKKKQHVVEVKEIRMSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+ A F+ G KVK++++FRGRE+ H + +L + E +++ ++ PK Sbjct: 91 ANDMNTKVNAAKKFISKGDKVKVTLRFRGREMAHMQSSKHILDDFAEALADVAVVEKAPK 150 Query: 122 FEGRQMIMILSSKC 135 EGR M ++L+ K Sbjct: 151 IEGRSMSLVLTEKK 164 >gi|166365759|ref|YP_001658032.1| translation initiation factor IF-3 [Microcystis aeruginosa NIES-843] gi|189028354|sp|B0JKQ1|IF3_MICAN RecName: Full=Translation initiation factor IF-3 gi|166088132|dbj|BAG02840.1| initiation factor IF-3 [Microcystis aeruginosa NIES-843] Length = 176 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + +P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 42 LRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQHTADIKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL+ + + +++ + P Sbjct: 102 DEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 162 KKEGRNMMMMLSPKK 176 >gi|145633197|ref|ZP_01788928.1| translation initiation factor IF-3 [Haemophilus influenzae 3655] gi|145634936|ref|ZP_01790643.1| translation initiation factor IF-3 [Haemophilus influenzae PittAA] gi|229845141|ref|ZP_04465276.1| translation initiation factor IF-3 [Haemophilus influenzae 6P18H1] gi|144986043|gb|EDJ92633.1| translation initiation factor IF-3 [Haemophilus influenzae 3655] gi|145267802|gb|EDK07799.1| translation initiation factor IF-3 [Haemophilus influenzae PittAA] gi|229811977|gb|EEP47671.1| translation initiation factor IF-3 [Haemophilus influenzae 6P18H1] Length = 194 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 58 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P Sbjct: 118 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAP 177 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 178 GKLEGRQAVMVLAPKK 193 >gi|319426374|gb|ADV54448.1| translation initiation factor IF-3 [Shewanella putrefaciens 200] Length = 180 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 46 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 106 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 165 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 166 MEGRQAIMVLAPKK 179 >gi|153000742|ref|YP_001366423.1| translation initiation factor IF-3 [Shewanella baltica OS185] gi|217973357|ref|YP_002358108.1| translation initiation factor IF-3 [Shewanella baltica OS223] gi|226707359|sp|A6WNH1|IF3_SHEB8 RecName: Full=Translation initiation factor IF-3 gi|254803491|sp|B8EES7|IF3_SHEB2 RecName: Full=Translation initiation factor IF-3 gi|151365360|gb|ABS08360.1| translation initiation factor IF-3 [Shewanella baltica OS185] gi|217498492|gb|ACK46685.1| translation initiation factor IF-3 [Shewanella baltica OS223] gi|315267631|gb|ADT94484.1| translation initiation factor IF-3 [Shewanella baltica OS678] Length = 180 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 46 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 106 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 165 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 166 MEGRQAIMVLAPKK 179 >gi|462396|sp|P33318|IF3_KLEPN RecName: Full=Translation initiation factor IF-3 gi|149215|gb|AAC36811.1| translation initiation factor IF3 [Klebsiella pneumoniae] Length = 180 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 103 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVEAFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 163 TKIEGRQMIMVLAPKK 178 >gi|313107812|ref|ZP_07793986.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 39016] gi|310880488|gb|EFQ39082.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 39016] Length = 154 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 18 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 78 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 138 KLEGRQLMMVIAPKK 152 >gi|127512959|ref|YP_001094156.1| translation initiation factor IF-3 [Shewanella loihica PV-4] gi|126638254|gb|ABO23897.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella loihica PV-4] Length = 173 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 39 ELADEAGVDLVEISPNAEPPVCRIMDYGKYLFDKAKAQKEQKKKQKQIQVKEIKFRPGTD 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG LL+ IK+ EI+ ++ PK Sbjct: 99 ENDYQVKLRNLKRFLEDGDKAKVTLRFRGREMAHQSLGMNLLNRIKDDLAEIAVVEAFPK 158 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 159 MEGRQAVMVLAPKK 172 >gi|238855712|ref|ZP_04646008.1| translation initiation factor IF-3 [Lactobacillus jensenii 269-3] gi|260665498|ref|ZP_05866345.1| translation initiation factor IF-3 [Lactobacillus jensenii SJ-7A-US] gi|282934765|ref|ZP_06340005.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|313471818|ref|ZP_07812310.1| translation initiation factor IF-3 [Lactobacillus jensenii 1153] gi|238831658|gb|EEQ23999.1| translation initiation factor IF-3 [Lactobacillus jensenii 269-3] gi|239528572|gb|EEQ67573.1| translation initiation factor IF-3 [Lactobacillus jensenii 1153] gi|260560766|gb|EEX26743.1| translation initiation factor IF-3 [Lactobacillus jensenii SJ-7A-US] gi|281301176|gb|EFA93480.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] Length = 158 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A+LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 18 LNQAADADLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KL + FL ++G KV++S++FRGR I H +LG E+L + E +I+ + + Sbjct: 78 EGNDFDTKLNHVRKFLSKEGAKVRVSIRFRGRAITHTELGLEVLEKMAEATKDIANVTAK 137 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 138 PKMEGRSMFLMLAPKS 153 >gi|24112886|ref|NP_707396.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 301] gi|30063015|ref|NP_837186.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|24051830|gb|AAN43103.1| protein chain initiation factor IF-3 [Shigella flexneri 2a str. 301] gi|30041264|gb|AAP16993.1| protein chain initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|281600918|gb|ADA73902.1| Translation initiation factor IF-3 [Shigella flexneri 2002017] Length = 144 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPST 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|261867956|ref|YP_003255878.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293392218|ref|ZP_06636552.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261413288|gb|ACX82659.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290952752|gb|EFE02871.1| translation initiation factor IF-3 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 159 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LEMAENAALDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K K++V+FRGRE+ HQD+G ++L +K EI+ ++ P Sbjct: 83 DEGDYQVKLRSLVRFLEDGDKAKVTVRFRGREMAHQDIGLDVLERVKNDLAEIAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPKK 158 >gi|160946417|ref|ZP_02093626.1| hypothetical protein PEPMIC_00377 [Parvimonas micra ATCC 33270] gi|158447533|gb|EDP24528.1| hypothetical protein PEPMIC_00377 [Parvimonas micra ATCC 33270] Length = 134 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 63/132 (47%), Positives = 82/132 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA E LDLV I + P VCKILD K RY K E+RKKQK +KE+++ P ID Sbjct: 1 MANEKKLDLVNISPNANPPVCKILDYGKYRYDSLKKEKESRKKQKVINVKEIRLTPSIDK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD++VK K + FL+ G KVK+SV+FRGRE+ H D+G+ +L KE E ++ + Sbjct: 61 HDIEVKAKHANNFLKAGDKVKVSVRFRGRELGHTDIGKVVLDKFKELTQEFGNVEKDSVM 120 Query: 123 EGRQMIMILSSK 134 EGR M M LS K Sbjct: 121 EGRNMTMFLSPK 132 >gi|319763196|ref|YP_004127133.1| translation initiation factor if-3 [Alicycliphilus denitrificans BC] gi|317117757|gb|ADV00246.1| translation initiation factor IF-3 [Alicycliphilus denitrificans BC] Length = 174 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIDIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG KVK++++FRGREI HQ+LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLADGDKVKVTLRFRGREITHQELGLALLNRLRDELADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|295399483|ref|ZP_06809465.1| translation initiation factor IF-3 [Geobacillus thermoglucosidasius C56-YS93] gi|294978949|gb|EFG54545.1| translation initiation factor IF-3 [Geobacillus thermoglucosidasius C56-YS93] Length = 124 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 73/121 (60%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 + + P VC+I+D K R+ QK EARKKQK +KEV++ P I+ HD KL+ Sbjct: 1 MAPNAKPPVCRIMDYGKFRFEQQKKEKEARKKQKVINVKEVRLSPTIEEHDFNTKLRNAR 60 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL G KVK +++F+GR I H+++G+ +L E +I ++ PK +GR M ++L+ Sbjct: 61 KFLEKGDKVKATIRFKGRAITHKEIGQRVLERFSEACSDIGVVETAPKMDGRSMFLVLAP 120 Query: 134 K 134 K Sbjct: 121 K 121 >gi|167763512|ref|ZP_02435639.1| hypothetical protein BACSTE_01886 [Bacteroides stercoris ATCC 43183] gi|167698806|gb|EDS15385.1| hypothetical protein BACSTE_01886 [Bacteroides stercoris ATCC 43183] Length = 200 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 VLEGKRMTIQLSPKK 173 >gi|329961278|ref|ZP_08299444.1| translation initiation factor IF-3 [Bacteroides fluxus YIT 12057] gi|328531943|gb|EGF58760.1| translation initiation factor IF-3 [Bacteroides fluxus YIT 12057] Length = 200 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LRLAEEHEADLVEISPNAEPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|313146206|ref|ZP_07808399.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] gi|313134973|gb|EFR52333.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] Length = 198 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 34 LKLAEEKEMDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 94 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 153 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 154 ILEGKRMTIQLSPKK 168 >gi|227892828|ref|ZP_04010633.1| translational initiation factor IF3 [Lactobacillus ultunensis DSM 16047] gi|227865330|gb|EEJ72751.1| translational initiation factor IF3 [Lactobacillus ultunensis DSM 16047] Length = 149 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KLK + FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 67 EGNDFDTKLKHVRKFLSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIASVISR 126 Query: 120 PKFEGRQMIMILSS 133 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLAP 140 >gi|255692011|ref|ZP_05415686.1| translation initiation factor IF-3 [Bacteroides finegoldii DSM 17565] gi|260622257|gb|EEX45128.1| translation initiation factor IF-3 [Bacteroides finegoldii DSM 17565] Length = 200 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|269302791|gb|ACZ32891.1| translation initiation factor IF-3 [Chlamydophila pneumoniae LPCoLN] Length = 186 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYDLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLAGRSLICVVAPGTV 170 >gi|29427520|sp|Q8RQ01|IF3_AZOVI RecName: Full=Translation initiation factor IF-3 gi|19386909|gb|AAL87031.1|AF332624_2 initiation factor 3 [Azotobacter vinelandii] Length = 181 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A+K QK IKE+K RP Sbjct: 45 LRVAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQVAAAKKNQKQVQIKEIKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 105 EEGDYQVKLRNLVRFLNDGDKAKVSLRFRGREMAHQELGMELLKRVENDLAEFGTVEQYP 164 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 165 KLEGRQLMMVIAPKK 179 >gi|225873842|ref|YP_002755301.1| translation initiation factor IF-3 [Acidobacterium capsulatum ATCC 51196] gi|225794043|gb|ACO34133.1| translation initiation factor IF-3 [Acidobacterium capsulatum ATCC 51196] Length = 174 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLVEI + TP VC+I D K Y K+ RKKQK IKEVK + Sbjct: 20 LKIARERSLDLVEISPNATPPVCRIQDYGKFLYEKDKSDRATRKKQKIITIKEVKFSVTV 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL +G KVK S++F+GR++ H+DLG +++ + + G+ ++ P Sbjct: 80 DEHDYQTKKNQAVRFLNEGDKVKASLRFKGRQMAHRDLGYNIINRLIQDIGDAGTVEFMP 139 Query: 121 KFEGRQMIMILSS 133 + EG + IL+ Sbjct: 140 RMEGTTLHAILAP 152 >gi|308535278|ref|YP_002138800.2| translation initiation factor IF-3 [Geobacter bemidjiensis Bem] gi|308052623|gb|ACH39004.2| translation initiation factor IF-3 [Geobacter bemidjiensis Bem] Length = 173 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKLAEAKKKQVQVELKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 96 DTHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFASELADIALVEVRQ 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|290968292|ref|ZP_06559834.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1 str. 28L] gi|290781651|gb|EFD94237.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1 str. 28L] Length = 154 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 63/131 (48%), Positives = 89/131 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A+E +LDLVE+ + P VC+I++ K RY QK EA+KKQK +KEVK+RP I+ Sbjct: 19 QIAEERHLDLVEVAPNGKPPVCRIMNYGKYRYEQQKREKEAKKKQKVLVLKEVKLRPNIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+KA FL DG KVK+++ FRGRE+ H +LGR+LL + E + ++ EPK Sbjct: 79 DHDFYVKMKAAQRFLGDGSKVKVTIMFRGREMSHPELGRDLLIRFADELKESAHVEKEPK 138 Query: 122 FEGRQMIMILS 132 EGR M M+++ Sbjct: 139 IEGRNMTMVMA 149 >gi|146296774|ref|YP_001180545.1| translation initiation factor IF-3 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410350|gb|ABP67354.1| bacterial translation initiation factor 3 (bIF-3) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 200 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KEV++ I Sbjct: 65 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEVRLTTTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E + ++ +P Sbjct: 125 EDHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEMVKDYGIVEKKP 184 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 185 KLDGKNLTAVIAPK 198 >gi|253567820|ref|ZP_04845231.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6] gi|251841893|gb|EES69973.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6] Length = 201 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|307564490|ref|ZP_07627031.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A] gi|307346850|gb|EFN92146.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A] Length = 227 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LELAQEEGVDLVEISPNAQPPVCRIIDYAKFLYQQKKHQKEMKQKQVKQDIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL++G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYLFKLKHAQGFLKEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLTPKKA 173 >gi|253996954|ref|YP_003049018.1| translation initiation factor IF-3 [Methylotenera mobilis JLW8] gi|253983633|gb|ACT48491.1| translation initiation factor IF-3 [Methylotenera mobilis JLW8] Length = 155 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLVEI + P VC+++D K +Y K E + KQK +KE+K RP D D + Sbjct: 25 DIDLVEIAPNAAPPVCRLMDYGKFKYAESKRQHEVKLKQKQVVVKEIKFRPGTDDGDYNI 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K++ I F++DG K KI+++FRGREI HQ+ G LL ++ E + ++ PK EGRQM Sbjct: 85 KVRNITRFIQDGDKAKITLRFRGREITHQEFGMALLKRVEADLKEYAVVEQYPKMEGRQM 144 Query: 128 IMILSS 133 +M+L Sbjct: 145 VMVLGP 150 >gi|206603263|gb|EDZ39743.1| Translation initiation factor 3 (IF-3) [Leptospirillum sp. Group II '5-way CG'] Length = 175 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E DLVE+ + P VCK++D K Y K ++ QKS IKEVK RP I Sbjct: 18 IKKAEEQGFDLVEVSPTAKPPVCKMMDFGKYMYEQSKKVHAMKQHQKSGQIKEVKFRPHI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K+ + FL DG K KIS+ FRGRE++H ++G+ELL I ++ ++ P Sbjct: 78 NEHDLETKINYVQRFLEDGNKAKISMMFRGREMIHTEVGKELLQKIIVATEGVAVLEVPP 137 Query: 121 KFEGRQMIMILSS 133 + EG M M L+ Sbjct: 138 RMEGSNMTMTLAP 150 >gi|294791033|ref|ZP_06756191.1| translation initiation factor IF-3 [Scardovia inopinata F0304] gi|294458930|gb|EFG27283.1| translation initiation factor IF-3 [Scardovia inopinata F0304] Length = 259 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ + P V K++D K +Y + A +AR+ Q + +KE + R I Sbjct: 20 LNLAREANLDLVEVSAHAKPPVAKLIDYGKYKYNEKIKARQARRNQSTAEVKETRFRLKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+S+ RGRE G ELL + + E ++ P Sbjct: 80 DDHDFEVKKNQVSRFLEGGDKVKVSIMLRGREQSRPVGGIELLQRLADEVEEFGSVESAP 139 Query: 121 KFEGRQMIMILSSK 134 + +GR +IM+L+ K Sbjct: 140 RRDGRNIIMVLAPK 153 >gi|198275236|ref|ZP_03207767.1| hypothetical protein BACPLE_01395 [Bacteroides plebeius DSM 17135] gi|198271819|gb|EDY96089.1| hypothetical protein BACPLE_01395 [Bacteroides plebeius DSM 17135] Length = 193 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K A E + KQ +KE++ P Sbjct: 39 LKLAEEHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRAKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL + ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVEQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 LLEGKRMTISLSPKK 173 >gi|289525879|emb|CBJ15361.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis Sweden2] Length = 175 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 155 KLNGRSLICVIAPGTL 170 >gi|298384717|ref|ZP_06994277.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14] gi|298262996|gb|EFI05860.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14] Length = 201 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHARGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDFAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|255008478|ref|ZP_05280604.1| translation initiation factor IF-3 [Bacteroides fragilis 3_1_12] Length = 203 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKEMDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQLP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M + LS K Sbjct: 159 ILEGKRMTIQLSPKK 173 >gi|282859091|ref|ZP_06268222.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010] gi|282588121|gb|EFB93295.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010] Length = 227 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ +DLVEI + P VC+I+D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LELAQHEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL +G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPKKT 173 >gi|332711009|ref|ZP_08430945.1| bacterial translation initiation factor 3 [Lyngbya majuscula 3L] gi|332350323|gb|EGJ29927.1| bacterial translation initiation factor 3 [Lyngbya majuscula 3L] Length = 176 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LRIAEEKELDLVLVSDKADPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++ + FL+ G KVK ++ FRGREI H +L + LL + + E++ + P Sbjct: 102 EDHDYNVRVNQAERFLKSGDKVKATITFRGREIQHSNLAQALLERMAKDLQELAEVQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 162 KREGRNMMMLLSPKK 176 >gi|297182916|gb|ADI19065.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0070_15B21] Length = 166 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++EA +DLVE+ P VC+++D K +Y K AR+ QK+ +KEVKM+P I Sbjct: 29 LEQSEEAGMDLVEVSPKANPPVCRMMDFGKFKYQQSKKQHAARQNQKTIHLKEVKMKPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ FL +G KVK+++ F GR + H+DLG L+ + GE ++ Sbjct: 89 EEHDFQFKVRNALRFLEEGDKVKVNIMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPV 148 Query: 121 KFEGRQMIMILSS 133 + EGR M MI++ Sbjct: 149 RNEGRSMFMIMAP 161 >gi|58337803|ref|YP_194388.1| translational initiation factor IF3 [Lactobacillus acidophilus NCFM] gi|227904452|ref|ZP_04022257.1| translational initiation factor IF3 [Lactobacillus acidophilus ATCC 4796] gi|58255120|gb|AAV43357.1| translational initiation factor IF3 [Lactobacillus acidophilus NCFM] gi|227867827|gb|EEJ75248.1| translational initiation factor IF3 [Lactobacillus acidophilus ATCC 4796] Length = 150 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 8 LNRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 67 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 68 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIANVISK 127 Query: 120 PKFEGRQMIMILSS 133 PK EGR M ++L+ Sbjct: 128 PKMEGRSMFLMLAP 141 >gi|119774901|ref|YP_927641.1| translation initiation factor IF-3 [Shewanella amazonensis SB2B] gi|119767401|gb|ABL99971.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella amazonensis SB2B] Length = 150 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 16 ELADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 75 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ+LG +L++ IK E + ++ PK Sbjct: 76 ENDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQNLGMDLMNRIKADLEEYAVVESFPK 135 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 136 MEGRQAIMVLAPKK 149 >gi|71275166|ref|ZP_00651453.1| Initiation factor 3 [Xylella fastidiosa Dixon] gi|71898247|ref|ZP_00680421.1| Initiation factor 3 [Xylella fastidiosa Ann-1] gi|170731157|ref|YP_001776590.1| translation initiation factor IF-3 [Xylella fastidiosa M12] gi|71163975|gb|EAO13690.1| Initiation factor 3 [Xylella fastidiosa Dixon] gi|71731986|gb|EAO34043.1| Initiation factor 3 [Xylella fastidiosa Ann-1] gi|167965950|gb|ACA12960.1| translation initiation factor IF-3 [Xylella fastidiosa M12] Length = 147 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMATRIEMDLGDDVVIESRP 130 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 131 RLEGRQMVMMVAPRK 145 >gi|110805472|ref|YP_688992.1| translation initiation factor IF-3 [Shigella flexneri 5 str. 8401] gi|110615020|gb|ABF03687.1| protein chain initiation factor IF-3 [Shigella flexneri 5 str. 8401] Length = 144 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE++HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMVHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|15618898|ref|NP_225184.1| translation initiation factor IF-3 [Chlamydophila pneumoniae CWL029] gi|15836521|ref|NP_301045.1| translation initiation factor IF-3 [Chlamydophila pneumoniae J138] gi|16752037|ref|NP_445403.1| translation initiation factor IF-3 [Chlamydophila pneumoniae AR39] gi|7387796|sp|Q9Z6R9|IF3_CHLPN RecName: Full=Translation initiation factor IF-3 gi|4377318|gb|AAD19127.1| Initiation Factor 3 [Chlamydophila pneumoniae CWL029] gi|7189777|gb|AAF38654.1| translation initiation factor 3 [Chlamydophila pneumoniae AR39] gi|8979363|dbj|BAA99197.1| initiation factor 3 [Chlamydophila pneumoniae J138] Length = 186 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYGLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLAGRSLICVVAPGTV 170 >gi|156934291|ref|YP_001438207.1| translation initiation factor IF-3 [Cronobacter sakazakii ATCC BAA-894] gi|156532545|gb|ABU77371.1| hypothetical protein ESA_02122 [Cronobacter sakazakii ATCC BAA-894] Length = 144 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|297538937|ref|YP_003674706.1| translation initiation factor IF-3 [Methylotenera sp. 301] gi|297258284|gb|ADI30129.1| translation initiation factor IF-3 [Methylotenera sp. 301] Length = 154 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ++DLVEI + P VC+++D K +Y K E + KQK +KE+K RP D D + Sbjct: 24 DIDLVEIAPNAVPPVCRLMDYGKFKYAESKKQHEVKLKQKQVQVKEIKFRPGTDDGDYAI 83 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K++ I F+ DG K KI+++FRGREI HQ+ G LL ++ E++ ++ PK EGRQM Sbjct: 84 KVRNIIRFIEDGDKAKITLRFRGREITHQEFGLALLRRVEADTKEVALVEQFPKMEGRQM 143 Query: 128 IMILSS 133 +M+L Sbjct: 144 VMVLGP 149 >gi|325269094|ref|ZP_08135715.1| translation initiation factor IF3 [Prevotella multiformis DSM 16608] gi|324988715|gb|EGC20677.1| translation initiation factor IF3 [Prevotella multiformis DSM 16608] Length = 226 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDLAHKQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYNFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K V Sbjct: 158 KLEGKKMFLYLAPKKV 173 >gi|297621144|ref|YP_003709281.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU 86-1044] gi|297376445|gb|ADI38275.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU 86-1044] Length = 168 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++ LDLVEI + P VCKI+D K RY K E++K +KEVK++P I Sbjct: 31 LKRAEDEGLDLVEIAPNANPPVCKIIDYGKFRYDQTKREKESKKASHQIKVKEVKVKPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDLQ K++ FL G KVK++ FRGRE+ H+ +G L+ I E E++ + Sbjct: 91 NEHDLQTKMRHAKDFLEKGNKVKVTCMFRGREMAHKSIGERLIQRIVEDLNEVAVCETPM 150 Query: 121 KFEGRQMIMILSS 133 K GR + ++L+ Sbjct: 151 KMFGRFLTVVLAP 163 >gi|253700847|ref|YP_003022036.1| translation initiation factor IF-3 [Geobacter sp. M21] gi|251775697|gb|ACT18278.1| translation initiation factor IF-3 [Geobacter sp. M21] Length = 173 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 36 LALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKLAEAKKKQVQVELKEVKLRPKT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 96 DTHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFAAELADIALVEVRQ 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 156 KMEGRSMFMIVAPKV 170 >gi|83815747|ref|YP_446894.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855] gi|83757141|gb|ABC45254.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855] Length = 153 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++ LDLVE+ P VCKILD K RY QK RKK KS +KE++ RP Sbjct: 17 LDRARDHELDLVEVAPDADPPVCKILDYGKYRYEKQKEEQRRRKKSKSMEMKELRFRPRT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+ FL DG KVK V+F+GR+I+++D G +LL + E EI+RID +P Sbjct: 77 EEHDFNFKVDHAREFLEDGNKVKAYVQFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQP 136 Query: 121 KFEGRQMIMILSS 133 + EGR+M+MIL+ Sbjct: 137 EMEGRRMVMILAP 149 >gi|300087924|ref|YP_003758446.1| translation initiation factor IF-3 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527657|gb|ADJ26125.1| translation initiation factor IF-3 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 199 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 81/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+ NLDLVE+ + P VC+++D K RY K + +K QK + +KEV++RP I Sbjct: 47 EMARRNNLDLVEVAPTSVPPVCRLMDYGKFRYEQTKKERDTKKNQKLSLLKEVRLRPKIG 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+++I L G KVK+++ FRGREI H +LG ++L E +++ ++ +P Sbjct: 107 AHDYDAKVRSIRKQLEAGDKVKVTIMFRGREITHSELGIKILKRAAEELSDVANVEGQPT 166 Query: 122 FEGRQMIMILSSKCV 136 G ++ ++L K Sbjct: 167 LLGSRIHLMLVPKPA 181 >gi|237722136|ref|ZP_04552617.1| translation initiation factor IF-3 [Bacteroides sp. 2_2_4] gi|260170789|ref|ZP_05757201.1| translation initiation factor IF-3 [Bacteroides sp. D2] gi|299149167|ref|ZP_07042228.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_23] gi|315919123|ref|ZP_07915363.1| conserved hypothetical protein [Bacteroides sp. D2] gi|229447946|gb|EEO53737.1| translation initiation factor IF-3 [Bacteroides sp. 2_2_4] gi|298512834|gb|EFI36722.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_23] gi|313692998|gb|EFS29833.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 203 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEKELDLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|282599728|ref|ZP_05971660.2| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] gi|282568407|gb|EFB73942.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] Length = 184 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 48 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 108 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGLEVLNRIKADLEELAVVESFP 167 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+LS K Sbjct: 168 SRIEGRQMIMVLSPKK 183 >gi|313905725|ref|ZP_07839085.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6] gi|313469432|gb|EFR64774.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6] Length = 134 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 81/132 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ+A LDLV++ P VCKI+D K RY + EARKKQ + IKE++M P ID Sbjct: 1 MAQDAGLDLVKVAPMAKPPVCKIVDYGKYRYEQARREKEARKKQHTVDIKEIRMSPNIDT 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K+ A FL G KVK++++FRGRE+ H R +L + + +I ++ +PK Sbjct: 61 NDLNTKVGAARKFLAKGDKVKVTIRFRGREMAHMQASRPILLDFAKALEDICIVEKQPKI 120 Query: 123 EGRQMIMILSSK 134 EGR M ++L K Sbjct: 121 EGRNMSIVLGQK 132 >gi|203284111|ref|YP_002221851.1| translation initiation factor IF-3 [Borrelia duttonii Ly] gi|203287649|ref|YP_002222664.1| translation initiation factor IF-3 [Borrelia recurrentis A1] gi|238690554|sp|B5RL16|IF3_BORDL RecName: Full=Translation initiation factor IF-3 gi|238690585|sp|B5RR09|IF3_BORRA RecName: Full=Translation initiation factor IF-3 gi|201083554|gb|ACH93145.1| translation initiation factor IF-3 [Borrelia duttonii Ly] gi|201084869|gb|ACH94443.1| translation initiation factor IF-3 [Borrelia recurrentis A1] Length = 186 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++ LDLVEI + P VCKI+D K ++ +K E RK QK +KEV+M+P I Sbjct: 49 IKCARDVELDLVEISPNALPPVCKIIDYGKYKFHQEKRQKEQRKNQKIIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I GFL++G KVK++++FRGRE+ H LG +L +I ER G+ + + + Sbjct: 109 DTHDLDFKYKNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILESILERVGDSNYVLESP 168 Query: 120 PKFEGRQMIMILSSKC 135 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIIAPKS 184 >gi|167767664|ref|ZP_02439717.1| hypothetical protein CLOSS21_02197 [Clostridium sp. SS2/1] gi|167710681|gb|EDS21260.1| hypothetical protein CLOSS21_02197 [Clostridium sp. SS2/1] Length = 191 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I P VCKI+D K +Y + A+KKQK +KEV+M P ID Sbjct: 57 KLADEAGLDLVKISPKAKPPVCKIIDYGKYKYEQTRKEKLAKKKQKVIDVKEVRMSPNID 116 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G +VK++++FRGRE+ H + + +L + + +++ ID +PK Sbjct: 117 TNDLNTKINHAKKFLAKGARVKVTLRFRGRELAHVNASKYILDDFAKALEDVATIDKKPK 176 Query: 122 FEGRQMIMILSSK 134 FEGR M M L+ K Sbjct: 177 FEGRSMTMFLAPK 189 >gi|150006538|ref|YP_001301282.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482] gi|254881561|ref|ZP_05254271.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA] gi|294778843|ref|ZP_06744260.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510] gi|319642945|ref|ZP_07997581.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A] gi|166198948|sp|A6L7J6|IF3_BACV8 RecName: Full=Translation initiation factor IF-3 gi|149934962|gb|ABR41660.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482] gi|254834354|gb|EET14663.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA] gi|294447296|gb|EFG15879.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510] gi|317385493|gb|EFV66436.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A] Length = 198 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + L+ K Sbjct: 159 LLEGKRMTISLAPKKA 174 >gi|315608031|ref|ZP_07883024.1| translation initiation factor IF3 [Prevotella buccae ATCC 33574] gi|315250500|gb|EFU30496.1| translation initiation factor IF3 [Prevotella buccae ATCC 33574] Length = 226 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+++D K Y +K+ E ++KQ IKE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRLIDYSKFLYQQKKHQKEMKQKQVKVEIKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL +G KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DEHDYQFKLKHAQEFLNEGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + ++ K Sbjct: 158 KLEGKKMFLYMAPKKT 173 >gi|46446336|ref|YP_007701.1| translation initiation factor IF-3 [Candidatus Protochlamydia amoebophila UWE25] gi|46399977|emb|CAF23426.1| probable translation initiation factor IF-3 [Candidatus Protochlamydia amoebophila UWE25] Length = 184 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI +P VCK+++ K RY K E +K Q +KE+K++P I Sbjct: 31 LAMAEEHGLDLVEIVPGSSPPVCKVMNFGKFRYDQSKREKENKKAQHQIKVKEIKLKPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL+ K + FL G KVK++ FRGRE+MH ++G +++ + + +IS + Sbjct: 91 DVHDLETKTRHARDFLASGNKVKVTCTFRGREMMHPEIGEKIVREMCQELEDISTPESPA 150 Query: 121 KFEGRQMIMILSS 133 K GR ++++L+ Sbjct: 151 KMMGRMLLVVLAP 163 >gi|295693379|ref|YP_003601989.1| translation initiation factor if-3 [Lactobacillus crispatus ST1] gi|295031485|emb|CBL50964.1| Translation initiation factor IF-3 [Lactobacillus crispatus ST1] Length = 149 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 85/134 (63%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K +KE+++ P I Sbjct: 7 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKIVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIANVISK 126 Query: 120 PKFEGRQMIMILSS 133 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLAP 140 >gi|238021045|ref|ZP_04601471.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147] gi|237868025|gb|EEP69031.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147] Length = 155 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 20 MSMAEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL DG KVKI+++FRGRE+ HQ +G +LL +K E ++I+ P Sbjct: 80 DDGDYNIKMRKVREFLTDGDKVKITLRFRGREMAHQQIGAQLLERVKADVAEEAQIESFP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 140 KLEGRQMVMMLAPKK 154 >gi|16273648|ref|NP_439469.1| translation initiation factor IF-3 [Haemophilus influenzae Rd KW20] gi|309750873|gb|ADO80857.1| Translation initiation factor IF-3 [Haemophilus influenzae R2866] gi|309973160|gb|ADO96361.1| Translation initiation factor IF-3 [Haemophilus influenzae R2846] Length = 180 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 44 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P Sbjct: 104 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAP 163 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 164 GKLEGRQAVMVLAPKK 179 >gi|256825065|ref|YP_003149025.1| translation initiation factor 3 [Kytococcus sedentarius DSM 20547] gi|256688458|gb|ACV06260.1| bacterial translation initiation factor 3 (bIF-3) [Kytococcus sedentarius DSM 20547] Length = 195 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 80/132 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA+LDLVE+ P V K++D K +Y E+RKKQ +T IKE+K+RP I Sbjct: 18 LRLAAEADLDLVEVAPMAKPPVAKLMDYGKFKYENAMKDRESRKKQVNTVIKEIKLRPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K ++ FL G KVK+++ FRGRE +LG LL + E E+ ++ +P Sbjct: 78 DQHDYETKKGHVERFLAAGDKVKVTIMFRGREQSKPELGFRLLQRLAEDVTELGVVESKP 137 Query: 121 KFEGRQMIMILS 132 K +GR M M+ Sbjct: 138 KQDGRNMTMVFG 149 >gi|182682532|ref|YP_001830692.1| translation initiation factor IF-3 [Xylella fastidiosa M23] gi|182632642|gb|ACB93418.1| translation initiation factor IF-3 [Xylella fastidiosa M23] gi|307578810|gb|ADN62779.1| translation initiation factor IF-3 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 147 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ LDLVEI P VCK+++ K ++ QK A EA+KK K IKE+K RPV Sbjct: 11 LAMAEKEGLDLVEIQPQADPPVCKVMNFGKFKFEQQKKANEAKKKTKQVEIKELKFRPVT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ + FL +G KVKI+++FRGRE+ HQ+LGR++ + I+ G+ I+ P Sbjct: 71 DEGDYQIKLRNMRRFLEEGDKVKINIRFRGREMSHQELGRQMAARIEMDLGDDVVIESRP 130 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M+++ + Sbjct: 131 RLEGRQMVMMVAPRK 145 >gi|158321005|ref|YP_001513512.1| translation initiation factor IF-3 [Alkaliphilus oremlandii OhILAs] gi|158141204|gb|ABW19516.1| translation initiation factor IF-3 [Alkaliphilus oremlandii OhILAs] Length = 142 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV+I P VCKI+D K +Y + K EARK QK +KEV++ P I+ Sbjct: 8 KLANGKNLDLVKIAPQANPPVCKIMDFGKYKYELSKKEKEARKNQKIVDVKEVRLSPSIE 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL VK FL++G KVK+++KFRGRE+ + G+ ++ E+S ++ EPK Sbjct: 68 SHDLSVKANNASKFLKNGDKVKVTMKFRGRELANTTKGQTIIKQFASILEEVSTVEKEPK 127 Query: 122 FEGRQMIMILSSKCV 136 EG+Q+IMIL+ K Sbjct: 128 LEGKQLIMILAPKNA 142 >gi|237808485|ref|YP_002892925.1| translation initiation factor IF-3 [Tolumonas auensis DSM 9187] gi|237500746|gb|ACQ93339.1| translation initiation factor IF-3 [Tolumonas auensis DSM 9187] Length = 179 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A +DLVEI + P VC+I+D K Y K+ E +KK K IKE+K RP Sbjct: 44 LDAAIKAGVDLVEISPTAEPPVCRIMDFGKFLYEKSKSVKEQKKKTKQIQIKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQDLG +L +K EI+ ++ P Sbjct: 104 DEGDYQVKLRNLIRFLEEGDKAKVTLRFRGREMAHQDLGMNVLERVKADLEEIAVVESFP 163 Query: 121 KFEGRQMIMILSSKC 135 + EGRQ +M+L+ K Sbjct: 164 RVEGRQAVMMLAPKK 178 >gi|224023752|ref|ZP_03642118.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM 18228] gi|224016974|gb|EEF74986.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM 18228] Length = 194 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHGADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DEHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 LLEGKRMTISLS 170 >gi|238919783|ref|YP_002933298.1| translation initiation factor IF-3, [Edwardsiella ictaluri 93-146] gi|238869352|gb|ACR69063.1| translation initiation factor IF-3, putative [Edwardsiella ictaluri 93-146] Length = 152 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 135 SKIEGRQMIMVLAPKK 150 >gi|77458159|ref|YP_347664.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf0-1] gi|330810592|ref|YP_004355054.1| translation initiation factor IF-3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|77382162|gb|ABA73675.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf0-1] gi|327378700|gb|AEA70050.1| translation initiation factor IF-3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 177 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL +++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEQDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPKK 175 >gi|62185352|ref|YP_220137.1| translation initiation factor IF-3 [Chlamydophila abortus S26/3] gi|62148419|emb|CAH64186.1| initiation factor IF-3 [Chlamydophila abortus S26/3] Length = 180 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 29 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRVKEVKLKPNI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G ++ + + ++ I+ EP Sbjct: 89 DDNDFATKLKQARGFIEKGNKVKITCMFRGRELAYPEHGYTVVQKMSQGLEDVGFIESEP 148 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 149 KLNGRSLICVVAPGTV 164 >gi|294636228|ref|ZP_06714642.1| translation initiation factor IF-3 [Edwardsiella tarda ATCC 23685] gi|291090485|gb|EFE23046.1| translation initiation factor IF-3 [Edwardsiella tarda ATCC 23685] Length = 152 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K + E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKASKEQKKKQKVVQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGIEVLNRVKNDLSELAVVESFP 134 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 135 TKIEGRQMIMVLAPKK 150 >gi|227877778|ref|ZP_03995811.1| translational initiation factor IF3 [Lactobacillus crispatus JV-V01] gi|227862637|gb|EEJ70123.1| translational initiation factor IF3 [Lactobacillus crispatus JV-V01] Length = 149 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEVTSDIANVISK 126 Query: 120 PKFEGRQMIMILSS 133 PK EGR M ++L+ Sbjct: 127 PKMEGRSMFLMLAP 140 >gi|227510529|ref|ZP_03940578.1| protein translation initiation factor 3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513538|ref|ZP_03943587.1| protein translation initiation factor 3 [Lactobacillus buchneri ATCC 11577] gi|227083411|gb|EEI18723.1| protein translation initiation factor 3 [Lactobacillus buchneri ATCC 11577] gi|227190181|gb|EEI70248.1| protein translation initiation factor 3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 169 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 31 LKLAEDAELDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++S++F+GR I H+++GR +L + + +++ + P Sbjct: 91 DVNDFNTKLKNAKKFLAKGEKVRVSIRFKGRAITHKEIGRNVLERMAKETDDVATVTQRP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 151 KMDGRSMFLMLSPK 164 >gi|153954229|ref|YP_001394994.1| hypothetical protein CKL_1604 [Clostridium kluyveri DSM 555] gi|219854834|ref|YP_002471956.1| hypothetical protein CKR_1491 [Clostridium kluyveri NBRC 12016] gi|146347110|gb|EDK33646.1| InfC [Clostridium kluyveri DSM 555] gi|219568558|dbj|BAH06542.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 170 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +DLV + P VCKI++ K Y K A A+K QK +KE+++ I Sbjct: 36 LNIAREKGMDLVMVSPQAKPPVCKIMNYSKFVYEQSKKAKLAKKNQKIVELKEIRLSATI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D+++K FL G KVK+S++FRGR+ + +LGR +L+ + E + ++ P Sbjct: 96 EQNDIEIKANNARKFLAKGNKVKVSIRFRGRQNNYTNLGRNVLNVFLSKVEEEASVERAP 155 Query: 121 KFEGRQMIMILSSKC 135 K EG M MIL+ K Sbjct: 156 KLEGNNMFMILAPKK 170 >gi|330829615|ref|YP_004392567.1| translation initiation factor IF-3 [Aeromonas veronii B565] gi|328804751|gb|AEB49950.1| translation initiation factor IF-3 [Aeromonas veronii B565] Length = 135 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 85/133 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP D Sbjct: 1 MAAEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL DG K K++++FRGRE+ HQDLG ++L +K E++ ++ PK Sbjct: 61 GDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQDLGIKVLERVKNDLEELAVVESFPKV 120 Query: 123 EGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 121 EGRQAVMVLAPKK 133 >gi|294101705|ref|YP_003553563.1| translation initiation factor IF-3 [Aminobacterium colombiense DSM 12261] gi|293616685|gb|ADE56839.1| translation initiation factor IF-3 [Aminobacterium colombiense DSM 12261] Length = 178 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLVE+ VC+ILD K RY +QK +ARKKQK +KE+KMRP I Sbjct: 23 LRMAEERNLDLVEVAPQAKVPVCRILDYGKYRYQLQKKEKDARKKQKGQTLKEIKMRPKI 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+KA+ FL+ G +VK+S+ FRGRE+ D GR +L+ + + +++ EP Sbjct: 83 DEHDYNFKVKAVMNFLKCGHRVKVSIFFRGREMAFLDKGRNVLARVVHDTESLGKVEAEP 142 Query: 121 KFEGRQMIMILSS 133 + EGR M M+L+ Sbjct: 143 RMEGRYMRMMLTP 155 >gi|294787058|ref|ZP_06752312.1| translation initiation factor IF-3 [Parascardovia denticolens F0305] gi|315226707|ref|ZP_07868495.1| translation initiation factor IF3 [Parascardovia denticolens DSM 10105] gi|294485891|gb|EFG33525.1| translation initiation factor IF-3 [Parascardovia denticolens F0305] gi|315120839|gb|EFT83971.1| translation initiation factor IF3 [Parascardovia denticolens DSM 10105] Length = 232 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+EANLDLVE+ + P V K++D K +Y + A EAR+ Q + +KE + R I Sbjct: 7 MNLAREANLDLVEVSAHAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEVKESRFRLKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK + FL G KVK+S+ RGRE G EL+ + + E ++ P Sbjct: 67 DDHDFEVKKNQVSRFLEGGDKVKVSIMLRGREQSRPVGGIELMQRLADEVEEFGTVESAP 126 Query: 121 KFEGRQMIMILSSK 134 + +GR +IM+L+ K Sbjct: 127 RRDGRNIIMVLAPK 140 >gi|89898050|ref|YP_515160.1| translation initiation factor IF-3 [Chlamydophila felis Fe/C-56] gi|89331422|dbj|BAE81015.1| translation initiation factor IF-3 [Chlamydophila felis Fe/C-56] Length = 186 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + ++ ++ EP Sbjct: 95 DENDFSTKLKQARSFIEKGNKVKITCMFRGRELAYPEHGHKVVQKMSQGLEDVGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVVAPGTV 170 >gi|42527659|ref|NP_972757.1| translation initiation factor IF-3 [Treponema denticola ATCC 35405] gi|41818487|gb|AAS12676.1| translation initiation factor IF-3 [Treponema denticola ATCC 35405] Length = 175 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA EA LDLVE+ + P VCKI+D K R+ ++K +++K QK ++E++M+P I Sbjct: 37 VKMAAEAGLDLVEVAPTAKPPVCKIIDYGKYRFQMEKKLRDSKKNQKQQMMREIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF--GEISRIDC 118 HDL+ K I FL G KVK++V+F GRE+ H +LG E+L+ + E+ E ++ Sbjct: 97 HDHDLEFKSSHIKKFLDGGDKVKVTVRFWGRELAHTELGYEVLNKVLEKLGGEEACTLEK 156 Query: 119 EPKFEGRQMIMILSSK 134 +P EGR M M LS K Sbjct: 157 KPAMEGRTMSMTLSPK 172 >gi|70729482|ref|YP_259220.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf-5] gi|7387794|sp|Q9X6E7|IF3_PSEFL RecName: Full=Translation initiation factor IF-3 gi|123775997|sp|Q4KEW3|IF3_PSEF5 RecName: Full=Translation initiation factor IF-3 gi|4972784|gb|AAD34787.1|AF136400_1 initiation factor IF3 [Pseudomonas fluorescens] gi|68343781|gb|AAY91387.1| translation initiation factor IF-3 [Pseudomonas fluorescens Pf-5] Length = 183 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLQEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPKK 181 >gi|24373853|ref|NP_717896.1| translation initiation factor IF-3 [Shewanella oneidensis MR-1] gi|24348260|gb|AAN55340.1|AE015671_7 translation initiation factor IF-3 [Shewanella oneidensis MR-1] Length = 143 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPKK 142 >gi|292899341|ref|YP_003538710.1| translation initiation factor IF-3 [Erwinia amylovora ATCC 49946] gi|291199189|emb|CBJ46303.1| translation initiation factor IF-3 [Erwinia amylovora ATCC 49946] Length = 183 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPKK 181 >gi|28869576|ref|NP_792195.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato str. DC3000] gi|66045403|ref|YP_235244.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae B728a] gi|213970494|ref|ZP_03398621.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato T1] gi|301384175|ref|ZP_07232593.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato Max13] gi|302062685|ref|ZP_07254226.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato K40] gi|302132642|ref|ZP_07258632.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302187614|ref|ZP_07264287.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae 642] gi|28852818|gb|AAO55890.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato str. DC3000] gi|63256110|gb|AAY37206.1| Initiation factor 3 [Pseudomonas syringae pv. syringae B728a] gi|213924665|gb|EEB58233.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tomato T1] gi|330876790|gb|EGH10939.1| translation initiation factor IF-3 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330951867|gb|EGH52127.1| translation initiation factor IF-3 [Pseudomonas syringae Cit 7] gi|330958897|gb|EGH59157.1| translation initiation factor IF-3 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330967297|gb|EGH67557.1| translation initiation factor IF-3 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330973950|gb|EGH74016.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aceris str. M302273PT] gi|331016138|gb|EGH96194.1| translation initiation factor IF-3 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 177 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPKK 175 >gi|329943114|ref|ZP_08291888.1| translation initiation factor IF-3 [Chlamydophila psittaci Cal10] gi|332287696|ref|YP_004422597.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] gi|313848270|emb|CBY17271.1| initiation factor IF-3 [Chlamydophila psittaci RD1] gi|325506988|gb|ADZ18626.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] gi|328814661|gb|EGF84651.1| translation initiation factor IF-3 [Chlamydophila psittaci Cal10] gi|328914949|gb|AEB55782.1| translation initiation factor IF-3 [Chlamydophila psittaci 6BC] Length = 186 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E++LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 35 LDLARESDLDLVEVASNSEPPVCKIMDYGKYRYNLTKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G +++ + + ++ I+ EP Sbjct: 95 DDNDFATKLKQARGFIEKGNKVKITCMFRGRELAYPEHGYKVVQKMSQGLEDVGFIESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVVAPGTV 170 >gi|126174366|ref|YP_001050515.1| translation initiation factor IF-3 [Shewanella baltica OS155] gi|160875441|ref|YP_001554757.1| translation initiation factor IF-3 [Shewanella baltica OS195] gi|125997571|gb|ABN61646.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella baltica OS155] gi|160860963|gb|ABX49497.1| translation initiation factor IF-3 [Shewanella baltica OS195] Length = 143 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPKK 142 >gi|147678290|ref|YP_001212505.1| translation initiation factor 3 [Pelotomaculum thermopropionicum SI] gi|146274387|dbj|BAF60136.1| translation initiation factor 3 [Pelotomaculum thermopropionicum SI] Length = 156 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVE+ + P VC+I+D K +Y K EARKKQK IKEVK+RP I Sbjct: 20 LRLAEERQLDLVEVAPAAKPPVCRIMDFGKYKYEQSKREKEARKKQKIINIKEVKLRPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK + FL+DG KVK ++ FRGREI+H LG++LL + E + S ++ +P Sbjct: 80 EDHDFEVKARNTVRFLKDGDKVKATIIFRGREIVHTQLGQQLLLRLAEYAKDFSSVERQP 139 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIMIL+ K Sbjct: 140 KLEGKNMIMILAPK 153 >gi|120598809|ref|YP_963383.1| translation initiation factor IF-3 [Shewanella sp. W3-18-1] gi|146293113|ref|YP_001183537.1| translation initiation factor IF-3 [Shewanella putrefaciens CN-32] gi|120558902|gb|ABM24829.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. W3-18-1] gi|145564803|gb|ABP75738.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella putrefaciens CN-32] Length = 143 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPK 128 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPKK 142 >gi|238895234|ref|YP_002919969.1| translation initiation factor IF-3 [Klebsiella pneumoniae NTUH-K2044] gi|262044122|ref|ZP_06017197.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330009685|ref|ZP_08306559.1| translation initiation factor IF-3 [Klebsiella sp. MS 92-3] gi|238547551|dbj|BAH63902.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038521|gb|EEW39717.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534773|gb|EGF61329.1| translation initiation factor IF-3 [Klebsiella sp. MS 92-3] Length = 144 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 IEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|239625927|ref|ZP_04668958.1| translation initiation factor IF-3 [Clostridiales bacterium 1_7_47_FAA] gi|239520157|gb|EEQ60023.1| translation initiation factor IF-3 [Clostridiales bacterium 1_7_47FAA] Length = 164 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+A LDLV+I + P VCKI+D K RY + + EARKKQK IKEV++ P I Sbjct: 30 LKMAQDAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEARKKQKVIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ ID Sbjct: 90 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMYKSKYILDDFAESLKDIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|121594740|ref|YP_986636.1| translation initiation factor 3 [Acidovorax sp. JS42] gi|120606820|gb|ABM42560.1| bacterial translation initiation factor 3 (bIF-3) [Acidovorax sp. JS42] Length = 205 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 51 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ+LG LL+ +++ G+ ++ P Sbjct: 111 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQELGLALLNRLRDDLGDTILVEQFP 170 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 171 KLEGRQMIMMIAP 183 >gi|332288527|ref|YP_004419379.1| translation initiation factor IF-3 [Gallibacterium anatis UMN179] gi|330431423|gb|AEC16482.1| translation initiation factor IF-3 [Gallibacterium anatis UMN179] Length = 154 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VC+I++ K Y K A E +KKQK +KEVK RP Sbjct: 18 LELAEQTDLDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L IK E++ ++ EP Sbjct: 78 DEGDYQVKLRSLIRFLEDGDKTKITLRFRGRELAHQQIGIEMLDRIKADLAELAVVESEP 137 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 138 SKIEGRQMVMVLAPKK 153 >gi|299139850|ref|ZP_07033022.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX8] gi|298598204|gb|EFI54370.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX8] Length = 183 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVEI + P VCKI D K Y K+ ARKKQK IKEVK + Sbjct: 18 LKMAREKSLDLVEISPNAVPPVCKIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL DG KVK S++F+GR++ H+DLG ++++ + GE ++ P Sbjct: 78 DEHDYQTKKNQAVRFLGDGDKVKASLRFKGRQMAHRDLGYKIINRLIMDIGEAGTVEFMP 137 Query: 121 KFEGRQMIMILSS 133 + EG + IL+ Sbjct: 138 RMEGTTLHAILAP 150 >gi|255994770|ref|ZP_05427905.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC 49989] gi|255993483|gb|EEU03572.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC 49989] Length = 177 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P VCKILD K +Y QK EARKKQK+ +KE+++ I Sbjct: 42 LDIAEEKGLDLVNVSPNAKPPVCKILDYGKFKYDQQKREKEARKKQKTIQVKEIRLSAAI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ VK K FL G KVK++++FRGRE H+++ +L ++ E I+ +P Sbjct: 102 EEHDIDVKAKRACKFLEAGDKVKVTLRFRGRERSHKEVAYAVLEKFAKKAEEFGEIEKKP 161 Query: 121 KFEGRQMIMILSSKC 135 +GR ++M+L + Sbjct: 162 TMDGRALVMMLMPRS 176 >gi|15597939|ref|NP_251433.1| translation initiation factor IF-3 [Pseudomonas aeruginosa PAO1] gi|254241196|ref|ZP_04934518.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 2192] gi|14194831|sp|Q9I0A0|IF3_PSEAE RecName: Full=Translation initiation factor IF-3 gi|9948821|gb|AAG06131.1|AE004702_8 translation initiation factor IF-3 [Pseudomonas aeruginosa PAO1] gi|126194574|gb|EAZ58637.1| translation initiation factor IF-3 [Pseudomonas aeruginosa 2192] Length = 183 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 47 IRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 167 KLEGRQLMMVIAPKK 181 >gi|154482660|ref|ZP_02025108.1| hypothetical protein EUBVEN_00333 [Eubacterium ventriosum ATCC 27560] gi|149736436|gb|EDM52322.1| hypothetical protein EUBVEN_00333 [Eubacterium ventriosum ATCC 27560] Length = 164 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 78/133 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDL++I P VCKI+D K RY QK EA+KKQ +KE+++ P ++ Sbjct: 31 KLADEAELDLIKISPKAKPPVCKIMDYGKFRYEQQKREKEAKKKQHIVEVKEIRLSPNVE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 ++DL+ K F+ G KVK++++FRGRE+ H +L + + +I+ + PK Sbjct: 91 INDLKTKANNARKFIEKGDKVKVTLRFRGREMAHISSNAHVLDDFAKMLEDIASVVKAPK 150 Query: 122 FEGRQMIMILSSK 134 EGR M M L K Sbjct: 151 LEGRNMTMFLEKK 163 >gi|124267076|ref|YP_001021080.1| translation initiation factor 3 [Methylibium petroleiphilum PM1] gi|124259851|gb|ABM94845.1| bacterial translation initiation factor 3 (bIF-3) [Methylibium petroleiphilum PM1] Length = 160 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 90/134 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A EA++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRLAGEADVDLVEISATADPPVCRLMDYGKFKYAEQKKAAEAKAKQHVIDIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ + FL +G K K+++++RGREI HQD+G LL I++ ++S ++ P Sbjct: 84 DEGDYAIKMRNLRRFLEEGDKGKVTLRYRGREITHQDIGMRLLERIRDELADVSVVENMP 143 Query: 121 KFEGRQMIMILSSK 134 K EGRQMIM+L K Sbjct: 144 KLEGRQMIMVLGPK 157 >gi|297183197|gb|ADI19338.1| translation initiation factor 3 (if-3) [uncultured delta proteobacterium HF0500_03A04] Length = 155 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVE+ P VC+++D K +Y K A++ QK T +KEVK +P I Sbjct: 18 LEKAQTDGLDLVEVSPKARPPVCRLMDFGKYKYQQSKRTHAAKQNQKITRLKEVKFKPKI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KL+ FL DG KVKI V F GR + H+D+GR LL+ E GE S ++ Sbjct: 78 EEHDYQFKLRNALRFLDDGDKVKIKVVFYGRMMAHKDMGRVLLNKFLEEVGERSVVEQPI 137 Query: 121 KFEGRQMIMILSS 133 EGR M MIL+ Sbjct: 138 MDEGRNMFMILAP 150 >gi|218438894|ref|YP_002377223.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424] gi|218171622|gb|ACK70355.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424] Length = 177 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + TP VC+++D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 43 LKIAEEKELDLVLVSETATPPVCRVMDYGKFKFEQEKKAREAKKKQHTADVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK ++ FRGREI H +L ELL + EI+ + P Sbjct: 103 DDHDYHVRVNQAQRFLKSGDKVKATITFRGREIQHANLAEELLQRMATDLQEIAEVQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M+LS K Sbjct: 163 KKEGRNMMMLLSPKK 177 >gi|160900047|ref|YP_001565629.1| translation initiation factor IF-3 [Delftia acidovorans SPH-1] gi|160365631|gb|ABX37244.1| translation initiation factor IF-3 [Delftia acidovorans SPH-1] Length = 205 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ TP VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAATATPPVCRLMDYGKFKYLEQKKAAEAKAKQTVIEIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ +G +LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQIGLDLLNRLRDDLADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQM+M+++ Sbjct: 169 KLEGRQMVMMIAP 181 >gi|71892131|ref|YP_277863.1| translation initiation factor IF-3 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796237|gb|AAZ40988.1| translation initiation factor IF-3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 179 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +++ LDLVE+ + P VC+I++ K Y K+ E +KKQK +KE+K RP Sbjct: 43 LKQSEDIGLDLVEVSPNSDPPVCRIMNYGKFLYEKNKSTKEQKKKQKVIHVKEIKFRPST 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G KVKI+++FRG E++H LG ++L I+ E++ ++ Sbjct: 103 DEGDYQVKLRNLIKFLNEGDKVKITLRFRGGELVHHQLGAKILYRIRHELHELTTVEFFS 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQM MIL+ K Sbjct: 163 NKIEGRQMTMILAPKK 178 >gi|95930295|ref|ZP_01313033.1| translation initiation factor IF-3 [Desulfuromonas acetoxidans DSM 684] gi|95133758|gb|EAT15419.1| translation initiation factor IF-3 [Desulfuromonas acetoxidans DSM 684] Length = 152 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDLVE+ + P VC+I+D K +Y +QK A EA+KK +KEVK+RP Sbjct: 17 LEAAADRGLDLVEVSPNAKPPVCRIMDYGKYKYQLQKRAAEAKKKAARVEVKEVKLRPKT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++HD VK+K + FL G KVK+++ FRGRE+ H + GRELL + + +I I+ P Sbjct: 77 EIHDFNVKVKNVRRFLDAGNKVKVTIMFRGREVTHPEFGRELLQRVADEVADIGVIEFFP 136 Query: 121 KFEGRQMIMILSS 133 +GR M M+++ Sbjct: 137 SMQGRFMHMVMAP 149 >gi|171463691|ref|YP_001797804.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193229|gb|ACB44190.1| translation initiation factor IF-3 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 169 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 77/124 (62%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P V +I+D K +Y K EA+ KQK +KEVK RP D D VKL Sbjct: 41 DLVEIVPTAVPPVVRIMDFGKFKYQEAKRMHEAKLKQKVIQVKEVKFRPGTDDGDYGVKL 100 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 + + FL DG K KI+++FRGRE+ HQ++G +L +K E +++ PK EGRQM+M Sbjct: 101 RNLIRFLEDGDKTKITLRFRGREMAHQEIGVRILERLKLDLVEYGQVEQFPKMEGRQMVM 160 Query: 130 ILSS 133 +L+ Sbjct: 161 VLAP 164 >gi|256850832|ref|ZP_05556221.1| translation initiation factor IF-3 [Lactobacillus jensenii 27-2-CHN] gi|260661043|ref|ZP_05861957.1| translation initiation factor IF-3 [Lactobacillus jensenii 115-3-CHN] gi|282934499|ref|ZP_06339754.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|297205705|ref|ZP_06923100.1| translation initiation factor IF3 [Lactobacillus jensenii JV-V16] gi|256615894|gb|EEU21082.1| translation initiation factor IF-3 [Lactobacillus jensenii 27-2-CHN] gi|260547980|gb|EEX23956.1| translation initiation factor IF-3 [Lactobacillus jensenii 115-3-CHN] gi|281301446|gb|EFA93735.1| translation initiation factor IF-3 [Lactobacillus jensenii 208-1] gi|297148831|gb|EFH29129.1| translation initiation factor IF3 [Lactobacillus jensenii JV-V16] Length = 158 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A +A+LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 18 LNQAADADLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 77 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KL + FL ++G KV++S++FRGR I H +LG ++L + + +I+ + + Sbjct: 78 EGNDFDTKLNHVRKFLSKEGAKVRVSIRFRGRAITHTELGLKVLEKMADATKDIANVTAK 137 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 138 PKMEGRSMFLMLAPKS 153 >gi|81429008|ref|YP_396008.1| translation initiation factor IF-3 [Lactobacillus sakei subsp. sakei 23K] gi|78610650|emb|CAI55701.1| Translation initiation factor IF-3 [Lactobacillus sakei subsp. sakei 23K] Length = 167 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++AN+D+V + + P V +I+D K R+ +QK +ARKKQK+ +KEV++ P I Sbjct: 30 IALAEQANMDVVLVSPNAKPPVARIMDYGKYRFELQKKQRDARKKQKTISLKEVRLSPTI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KL FL G KVK S++F+GR I H+++G+ +L + + +I+++ P Sbjct: 90 EQNDFNTKLNNARKFLGKGDKVKASIRFKGRAITHKEIGQRVLERLAKETEDIAKVTARP 149 Query: 121 KFEGRQMIMILSS 133 K +GR M ++L Sbjct: 150 KMDGRSMFLMLEP 162 >gi|170079295|ref|YP_001735933.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002] gi|238692800|sp|B1XM04|IF3_SYNP2 RecName: Full=Translation initiation factor IF-3 gi|169886964|gb|ACB00678.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002] Length = 178 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 82/128 (64%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I+ HD QV Sbjct: 49 DLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQHNADLKEVKMRYKIEEHDYQV 108 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 ++ + FL+ G KVK ++ FRGREI H +L ++LL + + E+ I PK EGR M Sbjct: 109 RVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNM 168 Query: 128 IMILSSKC 135 +MIL+ K Sbjct: 169 MMILAPKK 176 >gi|261368269|ref|ZP_05981152.1| translation initiation factor IF-3 [Subdoligranulum variabile DSM 15176] gi|282569784|gb|EFB75319.1| translation initiation factor IF-3 [Subdoligranulum variabile DSM 15176] Length = 146 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + +LDLV++ P VCKILD K R+ +QK EA+K QK +KE+++ I Sbjct: 10 LRMAIDKDLDLVKVAPQAKPPVCKILDYGKYRFEMQKKEKEAKKNQKVVEVKEIRLSLNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D K+ FL+ G K+K+S++FRGRE+ H LG ++ E + ID +P Sbjct: 70 DVNDFNTKVNQAAKFLQQGHKLKVSIRFRGREMAHTSLGLDVHKRFAEALAGKAVIDKQP 129 Query: 121 KFEGRQMIMILSS 133 K EGR M+M +S Sbjct: 130 KLEGRSMMMFMSP 142 >gi|16329482|ref|NP_440210.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803] gi|2497285|sp|P72874|IF3_SYNY3 RecName: Full=Translation initiation factor IF-3 gi|1651964|dbj|BAA16890.1| initiation factor IF-3 [Synechocystis sp. PCC 6803] Length = 177 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 MEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +ELL + + I P Sbjct: 102 DEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELLDRMATDLATEADIQQAP 161 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M+M LS K V Sbjct: 162 KREGRNMMMFLSPKKV 177 >gi|325856667|ref|ZP_08172305.1| translation initiation factor IF-3 [Prevotella denticola CRIS 18C-A] gi|327313433|ref|YP_004328870.1| translation initiation factor IF-3 [Prevotella denticola F0289] gi|325483381|gb|EGC86356.1| translation initiation factor IF-3 [Prevotella denticola CRIS 18C-A] gi|326945632|gb|AEA21517.1| translation initiation factor IF-3 [Prevotella denticola F0289] Length = 226 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 75/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LDLAHKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKELKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYNFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPKKA 173 >gi|256843629|ref|ZP_05549117.1| translation initiation factor IF-3 [Lactobacillus crispatus 125-2-CHN] gi|256850105|ref|ZP_05555535.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-1A-US] gi|262047393|ref|ZP_06020350.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-3A-US] gi|293380738|ref|ZP_06626786.1| translation initiation factor IF-3 [Lactobacillus crispatus 214-1] gi|256615049|gb|EEU20250.1| translation initiation factor IF-3 [Lactobacillus crispatus 125-2-CHN] gi|256713077|gb|EEU28068.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-1A-US] gi|260572367|gb|EEX28930.1| translation initiation factor IF-3 [Lactobacillus crispatus MV-3A-US] gi|290922702|gb|EFD99656.1| translation initiation factor IF-3 [Lactobacillus crispatus 214-1] Length = 150 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 8 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 67 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 68 EGNDFETKLKHVRKFISKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEVTSDIANVISK 127 Query: 120 PKFEGRQMIMILSS 133 PK EGR M ++L+ Sbjct: 128 PKMEGRSMFLMLAP 141 >gi|113970293|ref|YP_734086.1| translation initiation factor IF-3 [Shewanella sp. MR-4] gi|114047516|ref|YP_738066.1| translation initiation factor IF-3 [Shewanella sp. MR-7] gi|117920488|ref|YP_869680.1| translation initiation factor IF-3 [Shewanella sp. ANA-3] gi|113884977|gb|ABI39029.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. MR-4] gi|113888958|gb|ABI43009.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. MR-7] gi|117612820|gb|ABK48274.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella sp. ANA-3] Length = 143 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A EA +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D Sbjct: 9 NLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 69 ENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAIVESFPK 128 Query: 122 FEGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 129 MEGRQAIMVLAPKK 142 >gi|71736314|ref|YP_274355.1| translation initiation factor IF-3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|237801014|ref|ZP_04589475.1| translation initiation factor IF-3 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257486171|ref|ZP_05640212.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623635|ref|ZP_06456589.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647147|ref|ZP_06478490.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. 2250] gi|289673299|ref|ZP_06494189.1| translation initiation factor IF-3 [Pseudomonas syringae pv. syringae FF5] gi|298486702|ref|ZP_07004759.1| Translation initiation factor 3 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556867|gb|AAZ36078.1| translation initiation factor IF-3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158785|gb|EFH99848.1| Translation initiation factor 3 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324303|gb|EFW80382.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. B076] gi|320328575|gb|EFW84577.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867696|gb|EGH02405.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330885567|gb|EGH19716.1| translation initiation factor IF-3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888317|gb|EGH20978.1| translation initiation factor IF-3 [Pseudomonas syringae pv. mori str. 301020] gi|330898078|gb|EGH29497.1| translation initiation factor IF-3 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943372|gb|EGH45741.1| translation initiation factor IF-3 [Pseudomonas syringae pv. pisi str. 1704B] gi|330977710|gb|EGH77613.1| translation initiation factor IF-3 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330989240|gb|EGH87343.1| translation initiation factor IF-3 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010501|gb|EGH90557.1| translation initiation factor IF-3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331023871|gb|EGI03928.1| translation initiation factor IF-3 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 177 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEEAKLDLVEISADALPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPKK 175 >gi|260655004|ref|ZP_05860492.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1] gi|260630319|gb|EEX48513.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1] Length = 182 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LD+VE+ P VC+++D K RY QK +ARKKQK +KE+KMRP I Sbjct: 41 IHIASERELDVVEVAPDGKPPVCRVMDYGKYRYQQQKRVKDARKKQKVQALKEMKMRPKI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K +AI FL G +VK+SV FRGRE+ D GR++L+ + E+ R++ EP Sbjct: 101 DEHDYDFKTRAIAKFLETGHRVKVSVFFRGREMAFLDKGRDVLNRVAADVAEVGRMEGEP 160 Query: 121 KFEGRQMIMILSS 133 + EGR M + + Sbjct: 161 RMEGRYMRAMFAP 173 >gi|327402299|ref|YP_004343137.1| translation initiation factor 3 (bIF-3) [Fluviicola taffensis DSM 16823] gi|327317807|gb|AEA42299.1| bacterial translation initiation factor 3 (bIF-3) [Fluviicola taffensis DSM 16823] Length = 181 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E ++DLVEI + P VCKI+D RK Y ++ E + KQ +KE++ P Sbjct: 46 LQLAEEQDMDLVEISPNAVPPVCKIMDYRKFLYNQKRKQKELKAKQSKVILKEIRFGPNT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KL FL +G KVK V FRGR I+ +D G LL + ++ ++ P Sbjct: 106 DDHDFQFKLTHARKFLEEGSKVKAYVFFRGRTIVFKDRGEILLLKFVQELADLGTLEQMP 165 Query: 121 KFEGRQMIMILSSKC 135 K EG++MI++++ K Sbjct: 166 KLEGKRMIVMINPKK 180 >gi|313159203|gb|EFR58576.1| translation initiation factor IF-3 [Alistipes sp. HGB5] Length = 157 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+EI P VC+I D +K Y +K A E + Q IKE++ P Sbjct: 20 LKLADSMELDLIEISPKAEPPVCRIADYQKFLYQQKKKAKELKANQVKVVIKEIRFGPQT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++GCKVK V FRGR I+ ++ G LL E+++++ P Sbjct: 80 DDHDYNFKLKHATNFLKEGCKVKAYVFFRGRSIVFKEQGEILLLRFATDLEEVAKVEMMP 139 Query: 121 KFEGRQMIMILSSKC 135 K +G++M M+L+ K Sbjct: 140 KLDGKKMNMMLAPKT 154 >gi|312961942|ref|ZP_07776439.1| Translation initiation factor IF-3 [Pseudomonas fluorescens WH6] gi|311283752|gb|EFQ62336.1| Translation initiation factor IF-3 [Pseudomonas fluorescens WH6] Length = 177 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E+ LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 41 LRIAEESKLDLVEISADAVPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLLEYGSVEQHP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 161 KMEGRQLIMVIAPKK 175 >gi|262091755|gb|ACY25344.1| bacterial translation initiation factor 3 [uncultured actinobacterium] Length = 177 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLVE+ S P VC+I+D K RY + E+RKK +KEVK +P I Sbjct: 7 LERARVAELDLVEVASQADPPVCRIMDYGKFRYEESQKLKESRKKTVQITMKEVKFKPKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K++ + FLR+G KVK++++FRGRE+ H +LG ++L + E+ G ++++D Sbjct: 67 GKADFDTKVRHMQEFLREGHKVKVTLQFRGREVAHPELGTKILHAVIEQLGSVAKVDTHA 126 Query: 121 KFEGRQMIMILSS 133 + EGR M M+LS Sbjct: 127 RLEGRNMTMVLSP 139 >gi|260592278|ref|ZP_05857736.1| translation initiation factor IF-3 [Prevotella veroralis F0319] gi|260535912|gb|EEX18529.1| translation initiation factor IF-3 [Prevotella veroralis F0319] Length = 226 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LELAQKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPKKA 173 >gi|227524681|ref|ZP_03954730.1| protein translation initiation factor 3 [Lactobacillus hilgardii ATCC 8290] gi|227088165|gb|EEI23477.1| protein translation initiation factor 3 [Lactobacillus hilgardii ATCC 8290] Length = 169 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV + P V KILD K R+ +QK E+RKKQK +KEV++ P I Sbjct: 31 LKLAEDAELDLVLVAPKAKPPVAKILDYGKYRFELQKKERESRKKQKVISVKEVRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++D KLK FL G KV++ ++F+GR I H+++GR +L + + +++ + P Sbjct: 91 DVNDFNTKLKNAKKFLAKGEKVRVLIRFKGRAITHKEIGRNVLERMAKETDDVATVTQRP 150 Query: 121 KFEGRQMIMILSSK 134 K +GR M ++LS K Sbjct: 151 KMDGRSMFLMLSPK 164 >gi|212691283|ref|ZP_03299411.1| hypothetical protein BACDOR_00774 [Bacteroides dorei DSM 17855] gi|237712288|ref|ZP_04542769.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA] gi|237726427|ref|ZP_04556908.1| translation initiation factor IF-3 [Bacteroides sp. D4] gi|265751996|ref|ZP_06087789.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA] gi|212666515|gb|EEB27087.1| hypothetical protein BACDOR_00774 [Bacteroides dorei DSM 17855] gi|229434953|gb|EEO45030.1| translation initiation factor IF-3 [Bacteroides dorei 5_1_36/D4] gi|229453609|gb|EEO59330.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA] gi|263236788|gb|EEZ22258.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA] Length = 198 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEDHEADLVEISPNAVPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL+DG KVK V F+GR I+ ++ G LL E ++++ P Sbjct: 99 DDHDYNFKLKHAIGFLQDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++M + L+ K Sbjct: 159 LLEGKRMTISLAPKKA 174 >gi|304408773|ref|ZP_07390394.1| translation initiation factor IF-3 [Shewanella baltica OS183] gi|307302776|ref|ZP_07582531.1| translation initiation factor IF-3 [Shewanella baltica BA175] gi|304352594|gb|EFM16991.1| translation initiation factor IF-3 [Shewanella baltica OS183] gi|306913136|gb|EFN43558.1| translation initiation factor IF-3 [Shewanella baltica BA175] Length = 134 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 88/133 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K + K+A E +KKQK +KE+K RP D Sbjct: 1 MADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D QVKL+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK E + ++ PK Sbjct: 61 NDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLDEYAVVESFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQ IM+L+ K Sbjct: 121 EGRQAIMVLAPKK 133 >gi|88809920|ref|ZP_01125425.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805] gi|88786110|gb|EAR17272.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805] Length = 220 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEPAEIQQPP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|330825390|ref|YP_004388693.1| translation initiation factor IF-3 [Alicycliphilus denitrificans K601] gi|329310762|gb|AEB85177.1| Translation initiation factor IF-3 [Alicycliphilus denitrificans K601] Length = 199 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 90/133 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIDIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG KVK++++FRGREI HQ+LG LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKVKVTLRFRGREITHQELGLALLNRLRDELADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 169 KLEGRQMIMMIAP 181 >gi|299144128|ref|ZP_07037208.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518613|gb|EFI42352.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 135 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV + + P VC+I+D K RY + K EA+KKQK +KE+++ P I+ Sbjct: 1 MAEEKKLDLVNVSPNSKPPVCRIMDYGKYRYDMIKKEREAKKKQKVINVKELRLTPSIET 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL+ K FL++G +VKISV+FRGRE+ H ++G+++L + E E +D +PK Sbjct: 61 NDLKTKANRAKEFLQNGDRVKISVRFRGREMGHTEMGKDVLDDFVELISEYGVVDKKPKI 120 Query: 123 EGRQMIMILSSKC 135 EG+ MIM LS K Sbjct: 121 EGKSMIMFLSPKT 133 >gi|328944550|ref|ZP_08242011.1| translation initiation factor IF3 [Atopobium vaginae DSM 15829] gi|327490951|gb|EGF22729.1| translation initiation factor IF3 [Atopobium vaginae DSM 15829] Length = 162 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKIEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VKI++ FRGRE+ H + G+ +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKKGARVKITIMFRGREMAHPEQGQNVLDRLAADLKPYATVEAKPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|308233822|ref|ZP_07664559.1| translation initiation factor IF-3 [Atopobium vaginae DSM 15829] Length = 142 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E NLDLVEI P VCK++D RK +Y + A ARKKQ +KE+K RP ID Sbjct: 9 RIADEQNLDLVEIAPGAEPPVCKVMDYRKFKYDQDRKAKLARKKQVKIEVKEMKFRPKID 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + D K + FL+ G +VKI++ FRGRE+ H + G+ +L + + ++ +PK Sbjct: 69 VGDYTTKKNHVMRFLKKGARVKITIMFRGREMAHPEQGQNVLDRLAADLKPYATVEAKPK 128 Query: 122 FEGRQMIMILSS 133 EGR M M+++ Sbjct: 129 MEGRNMHMLVAP 140 >gi|160872850|ref|ZP_02062982.1| translation initiation factor IF-3 [Rickettsiella grylli] gi|159121649|gb|EDP46987.1| translation initiation factor IF-3 [Rickettsiella grylli] Length = 168 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A+EA+LDLVEI + P VC+I++ K + + K +KKQK +KEVK RPV + Sbjct: 32 RKAEEASLDLVEIAPTAIPPVCRIMNYGKYLFELSKQRTAQKKKQKRIQLKEVKFRPVTE 91 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ + FL+ G K KI+V+FRGREI H LG +L+ +++ + ID +PK Sbjct: 92 EGDYQVKLRNLIRFLQQGDKAKITVRFRGREIAHLHLGAKLIERLEKDLAAYAAIDDKPK 151 Query: 122 FEGRQMIMILSSKC 135 EGRQM++++S K Sbjct: 152 MEGRQMVLVVSPKK 165 >gi|15602467|ref|NP_245539.1| translation initiation factor IF-3 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720873|gb|AAK02686.1| InfC [Pasteurella multocida subsp. multocida str. Pm70] Length = 154 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 18 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+V+FRGRE+ HQD+G E+L +K EIS ++ P Sbjct: 78 DEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIGLEVLERVKNDLAEISVVESAP 137 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQ +M+L+ K Sbjct: 138 GRLEGRQAVMVLAPKK 153 >gi|257456996|ref|ZP_05622177.1| translation initiation factor IF-3 [Treponema vincentii ATCC 35580] gi|257445705|gb|EEV20767.1| translation initiation factor IF-3 [Treponema vincentii ATCC 35580] Length = 173 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+ NLDLVE+ P VCKILD K R+ ++K +++KKQK +KE++M+P I Sbjct: 37 LRMAQDVNLDLVEVAPQADPPVCKILDYGKYRFELEKKLRDSKKKQKLQVLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K + I FL G KVK++++FRGRE+ H +LG ++L+N+ + G ++ P Sbjct: 97 NDHDLSFKARHIQDFLDGGDKVKVTIRFRGRELAHTELGLDVLNNVLAKLGGDLTVEKPP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 157 AMEGRTMSMTLAPKS 171 >gi|229496109|ref|ZP_04389831.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC 35406] gi|229317005|gb|EEN82916.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC 35406] Length = 203 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A A LDLVEI + P VC+++D +K Y +K E + IKE++ P Sbjct: 46 LRIADRAGLDLVEIAAEANPPVCRVIDYQKFIYQKKKKLKEQKSNSVKVVIKEIRFGPQT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK F+ +G KVK V FRGR I+ +D G LL +I+ ++ P Sbjct: 106 DDHDYNFKLKHARSFIGEGSKVKAYVFFRGRSILFKDQGEVLLLRFATDLEDIATVESMP 165 Query: 121 KFEGRQMIMILSSKC 135 EG++M M+L+ K Sbjct: 166 SLEGKRMFMMLAPKK 180 >gi|68249987|ref|YP_249099.1| translation initiation factor IF-3 [Haemophilus influenzae 86-028NP] gi|145629397|ref|ZP_01785195.1| translation initiation factor IF-3 [Haemophilus influenzae 22.1-21] gi|145630795|ref|ZP_01786573.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|145636198|ref|ZP_01791868.1| translation initiation factor IF-3 [Haemophilus influenzae PittHH] gi|145638897|ref|ZP_01794505.1| translation initiation factor IF-3 [Haemophilus influenzae PittII] gi|145641654|ref|ZP_01797231.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|148826025|ref|YP_001290778.1| translation initiation factor IF-3 [Haemophilus influenzae PittEE] gi|229847477|ref|ZP_04467574.1| translation initiation factor IF-3 [Haemophilus influenzae 7P49H1] gi|260581335|ref|ZP_05849151.1| translation initiation factor IF-3 [Haemophilus influenzae RdAW] gi|260582457|ref|ZP_05850248.1| translation initiation factor IF-3 [Haemophilus influenzae NT127] gi|319776260|ref|YP_004138748.1| translation initiation factor IF-3 [Haemophilus influenzae F3047] gi|319897110|ref|YP_004135305.1| translation initiation factor if-3 [Haemophilus influenzae F3031] gi|329123400|ref|ZP_08251964.1| translation initiation factor IF3 [Haemophilus aegyptius ATCC 11116] gi|1574778|gb|AAC22963.1| translation initiation factor 3 (infC) [Haemophilus influenzae Rd KW20] gi|68058186|gb|AAX88439.1| translation initiation factor IF-3 [Haemophilus influenzae 86-028NP] gi|144978240|gb|EDJ88004.1| translation initiation factor IF-3 [Haemophilus influenzae 22.1-21] gi|144983677|gb|EDJ91137.1| translation initiation factor IF-3 [Haemophilus influenzae R3021] gi|145270720|gb|EDK10653.1| translation initiation factor IF-3 [Haemophilus influenzae PittHH] gi|145271869|gb|EDK11778.1| translation initiation factor IF-3 [Haemophilus influenzae PittII] gi|145273701|gb|EDK13570.1| translation initiation factor IF-3 [Haemophilus influenzae 22.4-21] gi|148716185|gb|ABQ98395.1| translation initiation factor IF-3 [Haemophilus influenzae PittEE] gi|229809618|gb|EEP45345.1| translation initiation factor IF-3 [Haemophilus influenzae 7P49H1] gi|260092002|gb|EEW75949.1| translation initiation factor IF-3 [Haemophilus influenzae RdAW] gi|260094437|gb|EEW78334.1| translation initiation factor IF-3 [Haemophilus influenzae NT127] gi|301170066|emb|CBW29670.1| translation initiation factor IF-3 [Haemophilus influenzae 10810] gi|317432614|emb|CBY80975.1| translation initiation factor IF-3 [Haemophilus influenzae F3031] gi|317450851|emb|CBY87075.1| translation initiation factor IF-3 [Haemophilus influenzae F3047] gi|327470982|gb|EGF16437.1| translation initiation factor IF3 [Haemophilus aegyptius ATCC 11116] Length = 135 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D Sbjct: 1 MAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P K Sbjct: 61 GDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAPGK 120 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 121 LEGRQAVMVLAPKK 134 >gi|295425302|ref|ZP_06818005.1| translation initiation factor IF3 [Lactobacillus amylolyticus DSM 11664] gi|295065078|gb|EFG55983.1| translation initiation factor IF3 [Lactobacillus amylolyticus DSM 11664] Length = 143 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A +A LDL I + P V +I+D K R+ QK E+RK K+ +KE+++ P I Sbjct: 1 MRQASDAGLDLALISPNAKPPVARIMDYGKYRFQQQKKLKESRKNSKTVSVKEIRLSPTI 60 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D KLK FL ++G KV++S++FRGR I H++LG+++L + E +I+ + Sbjct: 61 EGNDFDTKLKHAKKFLTKEGAKVRVSIRFRGRAITHKELGQQVLEKMAEATSDIATVISR 120 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 121 PKMEGRSMFLMLAPKS 136 >gi|119952988|ref|YP_945197.1| translation initiation factor IF-3 [Borrelia turicatae 91E135] gi|254803481|sp|A1QYY5|IF3_BORT9 RecName: Full=Translation initiation factor IF-3 gi|119861759|gb|AAX17527.1| bacterial protein translation initiation factor 3 (IF-3) [Borrelia turicatae 91E135] Length = 186 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A LDLVEI + P VCKI+D K ++ +K E ++ QK +KEV+M+P I Sbjct: 49 IKCARDAELDLVEISPNSVPPVCKIIDYGKYKFHQEKRQKEQKRNQKIIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K + I GFL++G KVK++++FRGRE+ H LG +L +I ER GE + + + Sbjct: 109 DTHDLDFKYRNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILESILERVGESNYVLESP 168 Query: 120 PKFEGRQMIMILSSKC 135 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIIAPKS 184 >gi|188025948|ref|ZP_02960309.2| hypothetical protein PROSTU_02249 [Providencia stuartii ATCC 25827] gi|188021025|gb|EDU59065.1| hypothetical protein PROSTU_02249 [Providencia stuartii ATCC 25827] Length = 159 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 23 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G ++L+ IK E++ ++ P Sbjct: 83 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMDVLNRIKSDLDELASVESFP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 143 SKIEGRQMIMVLAPKK 158 >gi|86143058|ref|ZP_01061480.1| translation initiation factor IF-3 [Leeuwenhoekiella blandensis MED217] gi|85830503|gb|EAQ48962.1| translation initiation factor IF-3 [Leeuwenhoekiella blandensis MED217] Length = 146 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLVEI + P VCK++D +K Y +K + K +KE++ P Sbjct: 10 LEIAQELELDLVEISPNANPPVCKVMDYKKFVYEQKKREKAIKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K FL +G K+K V F+GR I+++D G+ LL + + E +++ P Sbjct: 70 DDHDYEFKKKHAIKFLEEGAKLKAYVFFKGRSIIYKDQGQILLLRLAQDLEEYGKVEQMP 129 Query: 121 KFEGRQMIMILSSKC 135 K EG++MIM ++ K Sbjct: 130 KLEGKRMIMFMAPKK 144 >gi|294787703|ref|ZP_06752947.1| translation initiation factor IF-3 [Simonsiella muelleri ATCC 29453] gi|294483996|gb|EFG31679.1| translation initiation factor IF-3 [Simonsiella muelleri ATCC 29453] Length = 181 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M++E ++DLVEI + P VCK++D K +Y K EA+KKQK IKE+K RP Sbjct: 46 LAMSEEQDVDLVEISPTAKPPVCKLMDFGKYKYEQSKKRDEAKKKQKQVQIKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL G KVK++++FRGRE+ HQ++G +LL IK E +I+ P Sbjct: 106 DDGDYNIKMRKIKEFLSGGDKVKVTLRFRGREMAHQEIGAQLLERIKTELVEDGQIEQFP 165 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 166 KMEGRQMVMMVAPKK 180 >gi|197362603|ref|YP_002142240.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197094080|emb|CAR59580.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 144 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ +EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 7 LEKTEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 TKIEGRQMIMVLAPKK 142 >gi|117619989|ref|YP_856849.1| translation initiation factor IF-3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561396|gb|ABK38344.1| translation initiation factor IF-3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 135 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 85/133 (63%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA +DLVEI + P VC+I+D K Y K E +KKQK +KE+K RP D Sbjct: 1 MALEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKTTKEQKKKQKVVQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL DG K K++++FRGRE+ HQ+LG ++L +K E++ ++ PK Sbjct: 61 GDYQVKLRNLVRFLEDGDKAKVTLRFRGREMAHQELGIKVLERVKNDLEELAVVESFPKV 120 Query: 123 EGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 121 EGRQAVMVLAPKK 133 >gi|332529094|ref|ZP_08405058.1| translation initiation factor 3 [Hylemonella gracilis ATCC 19624] gi|332041317|gb|EGI77679.1| translation initiation factor 3 [Hylemonella gracilis ATCC 19624] Length = 180 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E ++DLVEI + P VC+++D K +Y QK A EA+ KQ +KEVK RP Sbjct: 24 LRLAGEMDVDLVEIVPTAVPPVCRLVDYGKFKYQEQKKAAEAKAKQTVIEVKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G KVKI+++FRGREI HQ+LG +L ++ G++ ++ P Sbjct: 84 DDGDYNIKLRNIKRFLEEGDKVKITLRFRGREITHQELGMAMLDRMRADLGDLIVVEQMP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|121591401|ref|ZP_01678682.1| initiation factor IF3 [Vibrio cholerae 2740-80] gi|153217653|ref|ZP_01951334.1| initiation factor IF3 [Vibrio cholerae 1587] gi|153817547|ref|ZP_01970214.1| initiation factor IF3 [Vibrio cholerae NCTC 8457] gi|153829044|ref|ZP_01981711.1| initiation factor IF3 [Vibrio cholerae 623-39] gi|6016327|sp|O68844|IF3_VIBCH RecName: Full=Translation initiation factor IF-3 gi|5825614|gb|AAD53320.1|AF179591_2 initiation factor IF3 [Vibrio cholerae] gi|3095162|gb|AAC38421.1| initiation factor IF3 [Vibrio cholerae] gi|121546738|gb|EAX56912.1| initiation factor IF3 [Vibrio cholerae 2740-80] gi|124113403|gb|EAY32223.1| initiation factor IF3 [Vibrio cholerae 1587] gi|126511972|gb|EAZ74566.1| initiation factor IF3 [Vibrio cholerae NCTC 8457] gi|148875473|gb|EDL73608.1| initiation factor IF3 [Vibrio cholerae 623-39] Length = 183 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E+ LDLVEI + P VC+++D K + K E +KKQK IKE+K RP Sbjct: 47 LATAEESGLDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P Sbjct: 107 DVGDYQVKLRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFP 166 Query: 121 -KFEGRQMIMILSSKC 135 K E RQMIM+L+ K Sbjct: 167 TKIEARQMIMVLAPKK 182 >gi|331083182|ref|ZP_08332298.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404571|gb|EGG84111.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 6_1_63FAA] Length = 195 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ IKEV++ P I+ + Sbjct: 64 AAEAGLDLVKIAPTAKPPVCKIIDYGKYKYELARKEKEAKKKQKTIEIKEVRLSPNIEEN 123 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ FL G KVK++++FRGRE+ H + +L E +++ ++ PK E Sbjct: 124 DLNTKVNNARKFLTKGNKVKVTLRFRGREMAHMQSSKCILEKFAEILSDVAVVEKAPKVE 183 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 184 GRSMTMFLTEK 194 >gi|302346318|ref|YP_003814616.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC 25845] gi|302150892|gb|ADK97153.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC 25845] Length = 226 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ +DLVEI + P VC+I+D K Y +K+ E ++KQ +KE++ P Sbjct: 38 LELAQKEGVDLVEISPNAQPPVCRIIDYSKFLYQQKKHQKEMKQKQVKQEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL G KV+ V FRGR I+ ++ G LL E+++++ P Sbjct: 98 DEHDYKFKLKHAQEFLNAGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEELAKVEQLP 157 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 158 KLEGKKMFLYLAPKKA 173 >gi|291617248|ref|YP_003519990.1| InfC [Pantoea ananatis LMG 20103] gi|291152278|gb|ADD76862.1| InfC [Pantoea ananatis LMG 20103] gi|327393702|dbj|BAK11124.1| translation initiation factor IF-3 InfC [Pantoea ananatis AJ13355] Length = 160 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/139 (42%), Positives = 91/139 (65%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 20 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL +G K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 80 DDGDYQVKLRNLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 139 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 140 SFPSKIEGRQMIMVLAPKK 158 >gi|51596665|ref|YP_070856.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 32953] gi|149365659|ref|ZP_01887694.1| translation initiation factor IF-3 [Yersinia pestis CA88-4125] gi|153948799|ref|YP_001400690.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 31758] gi|218929521|ref|YP_002347396.1| translation initiation factor IF-3 [Yersinia pestis CO92] gi|257168076|ref|NP_669220.2| translation initiation factor IF-3 [Yersinia pestis KIM 10] gi|20138481|sp|Q8ZDW6|IF3_YERPE RecName: Full=Translation initiation factor IF-3 gi|61213095|sp|Q669Z1|IF3_YERPS RecName: Full=Translation initiation factor IF-3 gi|166918494|sp|A7FHG2|IF3_YERP3 RecName: Full=Translation initiation factor IF-3 gi|51589947|emb|CAH21579.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 32953] gi|115348132|emb|CAL21060.1| translation initiation factor IF-3 [Yersinia pestis CO92] gi|149292072|gb|EDM42146.1| translation initiation factor IF-3 [Yersinia pestis CA88-4125] gi|152960294|gb|ABS47755.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis IP 31758] Length = 183 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/139 (42%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDSDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSKC 135 P + EGRQMIM+L+ K Sbjct: 163 SFPTRIEGRQMIMVLAPKK 181 >gi|189466355|ref|ZP_03015140.1| hypothetical protein BACINT_02730 [Bacteroides intestinalis DSM 17393] gi|189434619|gb|EDV03604.1| hypothetical protein BACINT_02730 [Bacteroides intestinalis DSM 17393] Length = 198 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEREVDLVEISPNAQPPVCRVIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEEGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|239993780|ref|ZP_04714304.1| Translation initiation factor 3 [Alteromonas macleodii ATCC 27126] Length = 144 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/131 (45%), Positives = 84/131 (64%), Gaps = 1/131 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+EA LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 11 AEEAGLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTDEG 70 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KF 122 D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P + Sbjct: 71 DYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKTDLEDIATCESFPRRV 130 Query: 123 EGRQMIMILSS 133 EGRQMIM+L+ Sbjct: 131 EGRQMIMVLAP 141 >gi|1170502|sp|P43814|IF3_HAEIN RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 64/134 (47%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D Sbjct: 38 MAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDE 97 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K EIS ++ P K Sbjct: 98 GDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLAEISVVESAPGK 157 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 158 LEGRQAVMVLAPKK 171 >gi|58039290|ref|YP_191254.1| protein translation initiation factor 3 [Gluconobacter oxydans 621H] gi|58001704|gb|AAW60598.1| Bacterial protein translation initiation factor 3 (IF-3) [Gluconobacter oxydans 621H] Length = 173 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 63/134 (47%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A LDL+EI + P V KILD K +Y QK EARKKQK IKEVK+RP Sbjct: 40 LMRAFSVGLDLLEISPTAVPPVVKILDYGKFKYEQQKKKNEARKKQKVIEIKEVKVRPGT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD Q KLKAI FL +G KVKIS++F+GRE+ HQ+LG ++L I++ E ++++ P Sbjct: 100 GEHDFQTKLKAIHSFLDEGDKVKISLRFKGREMAHQELGIKMLERIRQEVEEKAKVEQMP 159 Query: 121 KFEGRQMIMILSSK 134 + E RQM+M+++ + Sbjct: 160 RLENRQMLMVIAPR 173 >gi|256847509|ref|ZP_05552955.1| translation initiation factor IF-3 [Lactobacillus coleohominis 101-4-CHN] gi|256716173|gb|EEU31148.1| translation initiation factor IF-3 [Lactobacillus coleohominis 101-4-CHN] Length = 174 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + P+V +I+D K R+ +QK EARK QK+ +KE+++ P I Sbjct: 31 LQLAEDADLDLVLVAPKARPAVARIMDYGKYRFEMQKKEREARKNQKTQAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VKL + F+ G KV++S++FRGR I H+D+GR+++ + + +I+ + P Sbjct: 91 DTNDFNVKLNRVRKFIAKGDKVRVSLRFRGRAITHKDIGRDMIEKMADETKDIATVVQRP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M + L+ Sbjct: 151 KMEGRSMFLTLAP 163 >gi|326336127|ref|ZP_08202299.1| translation initiation factor IF3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691636|gb|EGD33603.1| translation initiation factor IF3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 155 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D +K Y +K A E + K IKE++ P Sbjct: 19 LRLAEEMELDLVEISPNAQPPVCKIVDYKKFLYEQKKRAKELKAKATKVEIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G+ELL + E +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGAKVKAYVFFKGRSIVYKDQGQELLLRLAVDLEEFGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 139 KLEGKRMTMFIAP 151 >gi|330443795|ref|YP_004376781.1| translation initiation factor IF-3 [Chlamydophila pecorum E58] gi|328806905|gb|AEB41078.1| translation initiation factor IF-3 [Chlamydophila pecorum E58] Length = 175 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA LDLVE+ S+ TP VCK++D K RY I K +++K Q +KEVK++P I Sbjct: 35 LDLAREAGLDLVEVSSNSTPPVCKVMDYGKYRYDITKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK GF+ G KVKI+ FRGRE+ + + G ++ I + ++ ++ EP Sbjct: 95 DENDFLTKLKQARGFIEKGNKVKITCTFRGRELAYPEHGLRVIKKISQGLEDVGFVEAEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR + +++ V Sbjct: 155 KLAGRSLTCVVAPGIV 170 >gi|153808044|ref|ZP_01960712.1| hypothetical protein BACCAC_02330 [Bacteroides caccae ATCC 43185] gi|149129653|gb|EDM20867.1| hypothetical protein BACCAC_02330 [Bacteroides caccae ATCC 43185] Length = 200 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 75/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+++D K Y ++K E + KQ +KE++ P Sbjct: 39 LKLAEEKELDLVEISPNAQPPVCRVIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 VLEGKRMTIQLS 170 >gi|297623447|ref|YP_003704881.1| translation initiation factor IF-3 [Truepera radiovictrix DSM 17093] gi|297164627|gb|ADI14338.1| translation initiation factor IF-3 [Truepera radiovictrix DSM 17093] Length = 181 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDL + P V K++D K RY +Q+ EAR+K + +K +K R I Sbjct: 38 LRLAREAELDLALVGEGAQPPVAKLMDYGKYRYELQQQEKEARRKSRQQEMKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ + FL+ G KVK+++ FRGRE H +LG+E+L+ + +I+ ++ P Sbjct: 98 DDHDYETKVNHVRRFLKGGHKVKLTIMFRGRERTHPELGQEILNRVASDVSDIAVVESAP 157 Query: 121 KFEGRQMIMILSS 133 G M M+L Sbjct: 158 SLAGMDMNMVLGP 170 >gi|332878706|ref|ZP_08446423.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683343|gb|EGJ56223.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 159 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 22 LEIAEELELDLVEISPNATPPVCKVIDYKKFLYEQKKRDKEMKAKATKVVIKEIRFGPQT 81 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 82 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 141 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 142 KLEGKRMTMFLAP 154 >gi|212711439|ref|ZP_03319567.1| hypothetical protein PROVALCAL_02512 [Providencia alcalifaciens DSM 30120] gi|212685895|gb|EEB45423.1| hypothetical protein PROVALCAL_02512 [Providencia alcalifaciens DSM 30120] Length = 143 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRNLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIKSDLEELASVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 127 SKIEGRQMIMVLAPKK 142 >gi|170717592|ref|YP_001784676.1| translation initiation factor IF-3 [Haemophilus somnus 2336] gi|168825721|gb|ACA31092.1| translation initiation factor IF-3 [Haemophilus somnus 2336] Length = 159 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A+LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LNMAEQADLDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +I+ ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDMLERVKNDLADIAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPKK 158 >gi|49089216|gb|AAT51657.1| PA2743 [synthetic construct] Length = 184 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+I+D K + +K A A+K QK +KE+K RP Sbjct: 47 IRLAEEAKLDLVEIPADAVPPVCRIMDYGKHLFEKKKLAAVAKKNQKQAQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYGTVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 167 KLEGRQLMMVIAPKK 181 >gi|148238481|ref|YP_001223868.1| translation initiation factor IF-3 [Synechococcus sp. WH 7803] gi|166233785|sp|A5GI06|IF3_SYNPW RecName: Full=Translation initiation factor IF-3 gi|147847020|emb|CAK22571.1| Translation initiation factor IF-3 [Synechococcus sp. WH 7803] Length = 220 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEPAEIQQPP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|320109032|ref|YP_004184622.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4] gi|319927553|gb|ADV84628.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4] Length = 181 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I D K Y K+ ARKKQK IKEVK + Sbjct: 10 LKVARERGLDLVEISPNAVPPVCRIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K FL DG KVK S++FRGR++ H+DLG ++++ + G+ ++ P Sbjct: 70 DEHDYQTKKNMAVRFLGDGDKVKASLRFRGRQMAHRDLGYKIINRLIMDIGDAGIVEFMP 129 Query: 121 KFEGRQMIMILSS 133 + EG + I++ Sbjct: 130 RMEGTTLHAIIAP 142 >gi|217077273|ref|YP_002334991.1| translation initiation factor IF-3 [Thermosipho africanus TCF52B] gi|217037128|gb|ACJ75650.1| translation initiation factor IF-3 [Thermosipho africanus TCF52B] Length = 141 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + + P V KI+D K +Y + K +A+K QK +K++K R I Sbjct: 7 LELAYSQKLDLILVAPNAKPPVAKIMDYGKYKYELAKREKKAKKNQKIIEVKQMKFRIKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL G KV++ + FRGRE+ D G+E+L I + +++ ++ P Sbjct: 67 DEHDYQTKLKHIKRFLEAGNKVRVVIMFRGREMAFADKGKEILDRIIKDLQDVASVEKAP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+L K Sbjct: 127 KLEGRDMWMMLKPKS 141 >gi|325957293|ref|YP_004292705.1| translational initiation factor IF3 [Lactobacillus acidophilus 30SC] gi|325333858|gb|ADZ07766.1| translational initiation factor IF3 [Lactobacillus acidophilus 30SC] gi|327184023|gb|AEA32470.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1118] Length = 147 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFVSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAESTSDIANVISK 126 Query: 120 PKFEGRQMIMILSSKC 135 PK EGR M ++L+ K Sbjct: 127 PKMEGRSMFLMLAPKS 142 >gi|60392427|sp|P0A132|IF3_PSESM RecName: Full=Translation initiation factor IF-3 gi|60392428|sp|P0A133|IF3_PSESY RecName: Full=Translation initiation factor IF-3 gi|1171432|gb|AAB05014.1| initiation factor IF3 [Pseudomonas syringae pv. syringae] Length = 183 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEEAKLDLVEISADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPKK 181 >gi|113461020|ref|YP_719087.1| translation initiation factor IF-3 [Haemophilus somnus 129PT] gi|112823063|gb|ABI25152.1| bacterial translation initiation factor 3 (bIF-3) [Haemophilus somnus 129PT] Length = 159 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++A+LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LNIAEQADLDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +I+ ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDMLERVKNDLADIAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ IM+L+ K Sbjct: 143 GKLEGRQAIMVLAPKK 158 >gi|157962083|ref|YP_001502117.1| translation initiation factor IF-3 [Shewanella pealeana ATCC 700345] gi|157847083|gb|ABV87582.1| translation initiation factor IF-3 [Shewanella pealeana ATCC 700345] Length = 158 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+++D K + K E +KKQK +KE+K RP D Sbjct: 24 EVADEAGVDLVEISPNAEPPVCRVMDYGKFLFDKAKAQKEQKKKQKIVQVKEIKFRPGTD 83 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG +LL+ IK I+ ++ PK Sbjct: 84 ENDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQSLGMDLLNRIKADLEVIAVVESFPK 143 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 144 MEGRQAVMVLAPKK 157 >gi|268678724|ref|YP_003303155.1| translation initiation factor IF-3 [Sulfurospirillum deleyianum DSM 6946] gi|268616755|gb|ACZ11120.1| translation initiation factor IF-3 [Sulfurospirillum deleyianum DSM 6946] Length = 171 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 74/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A E LDLV I P VCKI++ K +Y +K EARK QK +KE+K+ I Sbjct: 37 LAKADELGLDLVLIAPDAKPPVCKIMNYGKFKYQQEKKLKEARKNQKIIEVKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G V+ V RGRE+ + + G ++L ++ +I+ + P Sbjct: 97 ASNDINYKIKHAREFLEEGKHVRFRVFLRGREMANPEAGEQVLESLWPMLEDIAEREKTP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+++ K Sbjct: 157 KLEGRYINMLVTPKK 171 >gi|329954517|ref|ZP_08295608.1| translation initiation factor IF-3 [Bacteroides clarus YIT 12056] gi|328527485|gb|EGF54482.1| translation initiation factor IF-3 [Bacteroides clarus YIT 12056] Length = 200 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 74/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKIAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|260914006|ref|ZP_05920480.1| initiation factor IF3 [Pasteurella dagmatis ATCC 43325] gi|260632093|gb|EEX50270.1| initiation factor IF3 [Pasteurella dagmatis ATCC 43325] Length = 159 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 23 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKNDLADISVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+L+ K Sbjct: 143 GKLEGRQAVMVLAPKK 158 >gi|32490831|ref|NP_871085.1| hypothetical protein WGLp082 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340172|sp|Q8D3B9|IF3_WIGBR RecName: Full=Translation initiation factor IF-3 gi|25166037|dbj|BAC24228.1| infC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 196 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 1/131 (0%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 E +DLVEI + P VCKI++ K Y K+ E ++KQK KE+K RP D D Sbjct: 66 ELEMDLVEISPNSNPPVCKIMNYGKFLYEKNKSNKEQKRKQKIINTKEIKFRPNTDTGDY 125 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEG 124 +VKL+ + FL +G KVKIS++FRGRE++H+ +G +L+ I EIS I+ P K EG Sbjct: 126 KVKLRNLTRFLENGKKVKISLRFRGREMVHKKIGINMLNRICSDLKEISSIESFPNKIEG 185 Query: 125 RQMIMILSSKC 135 RQM +IL K Sbjct: 186 RQMTLILVPKK 196 >gi|123442190|ref|YP_001006171.1| translation initiation factor IF-3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161612|ref|YP_004298189.1| translation initiation factor IF-3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166233787|sp|A1JMK2|IF3_YERE8 RecName: Full=Translation initiation factor IF-3 gi|122089151|emb|CAL11993.1| translation initiation factor [Yersinia enterocolitica subsp. enterocolitica 8081] gi|325665842|gb|ADZ42486.1| Translation initiation factor IF-3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 183 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +K+ +++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVKKDLTEDSDLAVVE 162 Query: 118 CEP-KFEGRQMIMILSSKC 135 P + EGRQMIM+L+ K Sbjct: 163 SFPTRIEGRQMIMVLAPKK 181 >gi|254432422|ref|ZP_05046125.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001] gi|197626875|gb|EDY39434.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001] Length = 230 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 46 LEVARDRELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + + I P Sbjct: 106 DQHDYDVRIGQASRFLKAGDKVKCTVIFRGREIQHTALAEVLLMRMAKDLEAAAEIQQPP 165 Query: 121 KFEGRQMIMILSSK 134 K EGR MIM LS + Sbjct: 166 KREGRNMIMFLSPR 179 >gi|87301670|ref|ZP_01084510.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701] gi|87283887|gb|EAQ75841.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701] Length = 218 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ +LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRDLDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+DG KVK +V FRGREI H L +LL + + E + I +P Sbjct: 107 DSHDYQVRIGQAVRFLKDGDKVKCTVIFRGREIQHTALAEQLLFRMAKDLEESAEIQQDP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|318042883|ref|ZP_07974839.1| translation initiation factor IF-3 [Synechococcus sp. CB0101] Length = 215 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L +LL + + E + I +P Sbjct: 107 DQHDYDVRIGQASRFLKAGDKVKCTVIFRGREIQHTALAEQLLRRMAKDLEEKAEIQQDP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|291460372|ref|ZP_06599762.1| translation initiation factor IF-3 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416939|gb|EFE90658.1| translation initiation factor IF-3 [Oribacterium sp. oral taxon 078 str. F0262] Length = 325 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E +LDLV+I ++ P V +I D K RY + + EAR+ Q++T +KE++M P ID Sbjct: 192 RIARELDLDLVKIAATAAPPVVRITDYGKYRYEMLRKEKEARRNQRTTELKEIRMTPNID 251 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL KL A FL G KVKI+++FRGRE+ + + +L + ++ +I+ +D K Sbjct: 252 TNDLNTKLAAARKFLEKGNKVKIALRFRGREMSRMNQSKYILDDFGQQLSDIAVLDKPAK 311 Query: 122 FEGRQMIMILSSKC 135 EGR M ++LS K Sbjct: 312 VEGRNMAVVLSPKK 325 >gi|326800361|ref|YP_004318180.1| translation initiation factor IF-3 [Sphingobacterium sp. 21] gi|326551125|gb|ADZ79510.1| Translation initiation factor IF-3 [Sphingobacterium sp. 21] Length = 189 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VCK++D K Y +K E + K T IKE++ P Sbjct: 51 LAIADELELDLVEISPNANPPVCKVVDYSKFVYEQKKKLKEIKANAKQTVIKEIRFGPNT 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL G KV+ V F+GR I+++D G LL + EI +++ P Sbjct: 111 NEHDFEFKLKHAIKFLEAGEKVRAYVHFKGRAIVYKDRGEILLLKFAQALEEIGKVELLP 170 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 171 KLEGKRMFITVAPK 184 >gi|218130016|ref|ZP_03458820.1| hypothetical protein BACEGG_01599 [Bacteroides eggerthii DSM 20697] gi|217987819|gb|EEC54145.1| hypothetical protein BACEGG_01599 [Bacteroides eggerthii DSM 20697] Length = 200 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 74/132 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMILS 132 EG++M + LS Sbjct: 159 ILEGKRMTIQLS 170 >gi|238922263|ref|YP_002935777.1| translation initiation factor IF-3 [Eubacterium eligens ATCC 27750] gi|238873935|gb|ACR73643.1| translation initiation factor IF-3 [Eubacterium eligens ATCC 27750] Length = 164 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++A +DLV + S P VC+I+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 LNMAKDAGVDLVMVSPSANPPVCRIVDYGKFKYEQLRKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL K + F+ G KVK+S++FRGRE+ H D + +L + E+ +I+ I+ P Sbjct: 90 DVNDLNTKCNSARKFIEKGNKVKVSLRFRGREMAHIDSTKHILEDFAEKLSDIAVIEKAP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 150 KMEGRSMMMFLTEK 163 >gi|228472821|ref|ZP_04057579.1| translation initiation factor IF-3 [Capnocytophaga gingivalis ATCC 33624] gi|228275872|gb|EEK14638.1| translation initiation factor IF-3 [Capnocytophaga gingivalis ATCC 33624] Length = 155 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VCKI+D +K Y +K A E + K IKE++ P Sbjct: 19 LRLAEEMELDLVEISPNAQPPVCKIVDYKKFLYEQKKRAKELKAKATKVEIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G+ELL + E +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGAKVKAYVFFKGRSIVYKDQGQELLLRLAVDLEEYGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 139 KLEGKRMTMFIAP 151 >gi|110802686|ref|YP_699172.1| translation initiation factor IF-3 [Clostridium perfringens SM101] gi|110683187|gb|ABG86557.1| translation initiation factor IF-3 [Clostridium perfringens SM101] Length = 173 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 82/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L N + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDNFLNQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPKKA 173 >gi|300781276|ref|ZP_07091130.1| translation initiation factor IF3 [Corynebacterium genitalium ATCC 33030] gi|300532983|gb|EFK54044.1| translation initiation factor IF3 [Corynebacterium genitalium ATCC 33030] Length = 129 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 72/122 (59%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VE+ + P VCKI+D K +Y + A E+RK Q+ T +KE K RP ID HD Q K Sbjct: 2 VEVAPNAKPPVCKIMDYGKYKYEQAQKARESRKNQQQTVVKEQKFRPKIDEHDYQTKKAN 61 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 ++ FL G KVK+++ FRGRE +LG LL + E E+ +++ PK +GR M M+L Sbjct: 62 VERFLEKGNKVKVTIMFRGREQSRPELGYRLLERLAEDIQEVGQVESRPKQDGRNMTMVL 121 Query: 132 SS 133 Sbjct: 122 GP 123 >gi|87123250|ref|ZP_01079101.1| translation initiation factor [Synechococcus sp. RS9917] gi|86168970|gb|EAQ70226.1| translation initiation factor [Synechococcus sp. RS9917] Length = 220 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKDRELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQATRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|15616746|ref|NP_239958.1| translation initiation factor IF-3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11132699|sp|P57226|IF3_BUCAI RecName: Full=Translation initiation factor IF-3 gi|25299567|pir||D84944 translation initiation factor IF-3 [imported] - Buchnera sp. (strain APS) gi|10038809|dbj|BAB12844.1| translation initiation factor IF-3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 179 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++E LDLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP Sbjct: 43 LKKSEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIMIL+ K Sbjct: 163 SKIEGRQMIMILAPKK 178 >gi|29840528|ref|NP_829634.1| translation initiation factor IF-3 [Chlamydophila caviae GPIC] gi|33301219|sp|Q822B2|IF3_CHLCV RecName: Full=Translation initiation factor IF-3 gi|29834877|gb|AAP05512.1| translation initiation factor IF-3 [Chlamydophila caviae GPIC] Length = 186 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAREADLDLVEVASNSEPPVCKIMDYGKYRYDLTKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D KLK F+ G KVKI+ FRGRE+ + + G ++ + + +I ++ EP Sbjct: 95 DEGDFSTKLKQARAFIEKGNKVKITCMFRGRELAYPEHGHRVVQKMSQGLEDIGFMESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 155 KLNGRSLICVMAPGTV 170 >gi|282855602|ref|ZP_06264916.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455] gi|282586532|gb|EFB91786.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455] Length = 193 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVE+ P VC+ILD K RY QK +ARKKQK +KE+KMRP I Sbjct: 50 IAAAEERELDLVEVAPDGNPPVCRILDFGKYRYQQQKRDKDARKKQKVQALKEIKMRPKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K KA+ FL G +VK+S+ FRGRE+ D GRE+++ + + R+D EP Sbjct: 110 DEHDYDFKTKAVVKFLESGHRVKVSIFFRGREMAFLDKGREVINRVAADCAAVGRMDEEP 169 Query: 121 KFEGRQMIMILSS 133 + EGR M + Sbjct: 170 RMEGRYMRALFVP 182 >gi|166154177|ref|YP_001654295.1| translation initiation factor IF-3 [Chlamydia trachomatis 434/Bu] gi|166155052|ref|YP_001653307.1| translation initiation factor IF-3 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335422|ref|ZP_07223666.1| translation initiation factor IF-3 [Chlamydia trachomatis L2tet1] gi|165930165|emb|CAP03649.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis 434/Bu] gi|165931040|emb|CAP06603.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 186 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY I K +++K Q IKEVK++P I Sbjct: 35 LDLAKEADLDLVEVASNSEPPVCKIMDYGKYRYDITKKEKDSKKAQHQVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVVQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 155 KLNGRSLICVIAPGTL 170 >gi|126659540|ref|ZP_01730672.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110] gi|126619179|gb|EAZ89916.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110] Length = 195 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE +LDLV + S P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 58 LNVAQERDLDLVLVSESAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L ++LLS + E++ I P Sbjct: 118 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQDLLSRMATDLQELAEIQQAP 177 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 178 KREGRNMMMLMSPKK 192 >gi|268592568|ref|ZP_06126789.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] gi|291311982|gb|EFE52435.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] Length = 143 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQQIGLEMLNRIKADLEELASVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 127 SRIEGRQMIMVLAPKK 142 >gi|33242359|ref|NP_877300.1| translation initiation factor IF-3 [Chlamydophila pneumoniae TW-183] gi|33236870|gb|AAP98957.1| translation initiation factor IF-3 [Chlamydophila pneumoniae TW-183] Length = 152 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 54/136 (39%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+EA LDLVE+ S+ P VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 1 MDLAREAGLDLVEVASNSEPPVCKIMDYGKYRYGLTKKEKDSKKAQHQVRIKEVKLKPNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KLK F+ G KVKI+ FRGRE+ + + G +++ + + +I ++ EP Sbjct: 61 DENDFSTKLKQARTFVEKGNKVKITCMFRGRELAYPEHGFKVVQKMSQGLEDIGFVEAEP 120 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ V Sbjct: 121 KLAGRSLICVVAPGTV 136 >gi|322514759|ref|ZP_08067784.1| translation initiation factor IF3 [Actinobacillus ureae ATCC 25976] gi|322119297|gb|EFX91417.1| translation initiation factor IF3 [Actinobacillus ureae ATCC 25976] Length = 159 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK IKE+K RP Sbjct: 23 LARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQIKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P Sbjct: 83 DDGDYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLERVKTDTAEVAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 143 GKLEGRQAVMVIAPKK 158 >gi|219681501|ref|YP_002467886.1| translation initiation factor IF-3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682057|ref|YP_002468441.1| translation initiation factor IF-3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254803482|sp|B8D8S7|IF3_BUCA5 RecName: Full=Translation initiation factor IF-3 gi|254803483|sp|B8D731|IF3_BUCAT RecName: Full=Translation initiation factor IF-3 gi|219621790|gb|ACL29946.1| translation initiation factor IF-3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624344|gb|ACL30499.1| translation initiation factor IF-3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 179 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ ++E LDLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP Sbjct: 43 LKKSEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P Sbjct: 103 DEGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFP 162 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQMIMIL+ K Sbjct: 163 SKIEGRQMIMILAPKK 178 >gi|308186647|ref|YP_003930778.1| Translation initiation factor IF-3 [Pantoea vagans C9-1] gi|308057157|gb|ADO09329.1| Translation initiation factor IF-3 [Pantoea vagans C9-1] Length = 160 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 20 LEKAEEAGGDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 80 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 139 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 140 SFPSKIEGRQMIMVLAPKK 158 >gi|256819830|ref|YP_003141109.1| translation initiation factor IF-3 [Capnocytophaga ochracea DSM 7271] gi|315225229|ref|ZP_07867046.1| translation initiation factor IF3 [Capnocytophaga ochracea F0287] gi|256581413|gb|ACU92548.1| translation initiation factor IF-3 [Capnocytophaga ochracea DSM 7271] gi|314944912|gb|EFS96944.1| translation initiation factor IF3 [Capnocytophaga ochracea F0287] Length = 156 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 19 LEIANELELDLVEISPNATPPVCKVIDYKKFLYEQKKREKEMKAKATKVVIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 79 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 138 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 139 KLEGKRMTMFLAP 151 >gi|15834841|ref|NP_296600.1| translation initiation factor IF-3 [Chlamydia muridarum Nigg] gi|270285006|ref|ZP_06194400.1| translation initiation factor IF-3 [Chlamydia muridarum Nigg] gi|270289029|ref|ZP_06195331.1| translation initiation factor IF-3 [Chlamydia muridarum Weiss] gi|301336404|ref|ZP_07224606.1| translation initiation factor IF-3 [Chlamydia muridarum MopnTet14] gi|14194839|sp|Q9PL86|IF3_CHLMU RecName: Full=Translation initiation factor IF-3 gi|7190260|gb|AAF39093.1| translation initiation factor 3 [Chlamydia muridarum Nigg] Length = 186 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA+LDLVE+ S+ P VCKI+D K RY + K +++K Q +KEVK++P I Sbjct: 35 LDLAREADLDLVEVASNSEPPVCKIMDYGKYRYDVTKKEKDSKKAQHQVRVKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K+K F+ G KVK+S FRGRE+ + + G +++ + + ++ ++ EP Sbjct: 95 DDNDFLTKVKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVVQRMCQGLEDVGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 155 KLNGRSLICVIAPGTL 170 >gi|20532091|sp|Q8XJ67|IF3_CLOPE RecName: Full=Translation initiation factor IF-3 Length = 177 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 43 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 102 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 103 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 162 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ K Sbjct: 163 LEGRNMIMILAPKKA 177 >gi|289208098|ref|YP_003460164.1| translation initiation factor IF-3 [Thioalkalivibrio sp. K90mix] gi|288943729|gb|ADC71428.1| translation initiation factor IF-3 [Thioalkalivibrio sp. K90mix] Length = 172 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 64/135 (47%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQE+ LDLVEI + P V +I+D K ++ K A EA+KKQK IKEVK RP Sbjct: 37 LEMAQESGLDLVEISPNAEPPVARIMDYGKFKFEQAKKAQEAKKKQKQIQIKEVKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +VKL+ + F+ G K K++++FRGRE+ HQ+LG ELL I++ +I+ ++ P Sbjct: 97 DEGDYKVKLRNLRRFIEAGDKGKVTIRFRGREMRHQELGGELLDKIEQDMSDIAVVEQRP 156 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L+ K Sbjct: 157 KMEGRQMIMVLTGKK 171 >gi|159904304|ref|YP_001551648.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9211] gi|226713805|sp|A9BD81|IF3_PROM4 RecName: Full=Translation initiation factor IF-3 gi|159889480|gb|ABX09694.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9211] Length = 202 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + P VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAQERELDLVLVSEKANPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +V++ FL+ G KVK +V FRGREI H +L LL+ + + E + + P Sbjct: 107 DQHDYEVRINQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEQAEVQQTP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|315038856|ref|YP_004032424.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1112] gi|312276989|gb|ADQ59629.1| translational initiation factor IF3 [Lactobacillus amylovorus GRL 1112] Length = 147 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDLV I + P V +I+D K R+ QK E+RKK K+ +KE+++ P I Sbjct: 7 LRRASDAGLDLVLISPNAKPPVARIMDYGKYRFEQQKKLKESRKKSKTVSVKEIRLSPTI 66 Query: 61 DLHDLQVKLKAIDGFL-RDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 + +D + KLK + F+ ++G KV++S++FRGR I H++LG+++L + E +I+ + + Sbjct: 67 EGNDFETKLKHVRKFVSKEGAKVRVSIRFRGRAITHKELGQQVLEKMAESTSDIANVISK 126 Query: 120 PKFEGRQMIMILSSKC 135 P EGR M ++L+ K Sbjct: 127 PTMEGRSMFLMLAPKS 142 >gi|325067167|ref|ZP_08125840.1| translation initiation factor IF-3 [Actinomyces oris K20] Length = 142 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 49/123 (39%), Positives = 74/123 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA+LDLVE+ P VCK++D K +Y A +AR+ Q +T +KE++ RP I Sbjct: 20 LRLAEEADLDLVEVAPDARPPVCKLMDYGKFKYESAMKARDARRNQANTQLKEIQFRPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FL+ G KVK V+FRGRE +LG LL + E E+ I+ P Sbjct: 80 DEHDYATKRGHVERFLKGGDKVKCIVRFRGREQSRPELGIRLLQGLAEEMAELGTIESHP 139 Query: 121 KFE 123 + + Sbjct: 140 RQD 142 >gi|322437116|ref|YP_004219328.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX9] gi|321164843|gb|ADW70548.1| translation initiation factor IF-3 [Acidobacterium sp. MP5ACTX9] Length = 193 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E +LDLVEI + P VCKI D K Y K+ ARKKQK IKEVK + Sbjct: 7 LKMAREKSLDLVEISPNAVPPVCKIQDYGKYLYEKDKSDRAARKKQKVIVIKEVKFSVTV 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K FL DG KVK S++F+GR++ H+DLG ++++ + G+ ++ P Sbjct: 67 DEHDYVTKKNMAVRFLHDGDKVKASLRFKGRQMAHRDLGYKIINRLILDIGDAGLVEFMP 126 Query: 121 KFEGRQMIMILSS 133 + EG + IL+ Sbjct: 127 RMEGTTLHAILAP 139 >gi|332306909|ref|YP_004434760.1| translation initiation factor IF-3 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174238|gb|AEE23492.1| translation initiation factor IF-3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 154 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+++NLDLVEI + P VCK++D K + K E +KKQK +KE+K RP Sbjct: 18 LETAEQSNLDLVEISPNAEPPVCKVMDYGKFIFEKSKAQKEQKKKQKQIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P Sbjct: 78 DEGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKGDLEDIANCESFP 137 Query: 121 -KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 138 NRVEGRQMIMVLAP 151 >gi|89900131|ref|YP_522602.1| translation initiation factor IF-3 [Rhodoferax ferrireducens T118] gi|89344868|gb|ABD69071.1| bacterial translation initiation factor 3 (bIF-3) [Rhodoferax ferrireducens T118] Length = 171 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKE+K RP Sbjct: 24 LRMAGDLDVDLVEISATAVPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEIKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL +G K KI+++FRGREI HQDLG LL+ I+ G++ I+ P Sbjct: 84 DEGDYNIKMRNIKRFLAEGDKCKITLRFRGREITHQDLGMALLNRIRTELGDLILIEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMIAP 156 >gi|322833538|ref|YP_004213565.1| translation initiation factor IF-3 [Rahnella sp. Y9602] gi|321168739|gb|ADW74438.1| translation initiation factor IF-3 [Rahnella sp. Y9602] Length = 183 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 61/139 (43%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 43 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ E++ ++ Sbjct: 103 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDSELAVVE 162 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 163 SFPTKIEGRQMIMVLAPKK 181 >gi|241890072|ref|ZP_04777370.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379] gi|329767186|ref|ZP_08258713.1| translation initiation factor IF-3 [Gemella haemolysans M341] gi|241863694|gb|EER68078.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379] gi|328836853|gb|EGF86500.1| translation initiation factor IF-3 [Gemella haemolysans M341] Length = 175 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ NLD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERMNLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKEKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPKK 173 >gi|213963373|ref|ZP_03391629.1| translation initiation factor IF-3 [Capnocytophaga sputigena Capno] gi|213954041|gb|EEB65367.1| translation initiation factor IF-3 [Capnocytophaga sputigena Capno] Length = 154 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + TP VCK++D +K Y +K E + K IKE++ P Sbjct: 17 LEIANELELDLVEISPNATPPVCKVIDYKKFLYEQKKRDKELKAKATKVVIKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G KVK V F+GR I+++D G LL + + +++ P Sbjct: 77 DDHDYEFKKKHGEKFLKEGSKVKAYVFFKGRSIIYKDQGEILLLRLATDLEDYGKVEQMP 136 Query: 121 KFEGRQMIMILSS 133 K EG++M M L+ Sbjct: 137 KLEGKRMTMFLAP 149 >gi|187918064|ref|YP_001883627.1| translation initiation factor IF-3 [Borrelia hermsii DAH] gi|238689282|sp|B2RZQ1|IF3_BORHD RecName: Full=Translation initiation factor IF-3 gi|119860912|gb|AAX16707.1| bacterial protein translation initiation factor 3 (IF-3) [Borrelia hermsii DAH] Length = 186 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLVE+ +V P VCKI+D K ++ K E RK QK +KEV+M+P I Sbjct: 49 MRCARDAELDLVEVSPNVLPPVCKIIDYGKYKFHQGKRQKEQRKNQKIIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K + I GFL++G KVK++++FRGRE+ H LG +L I ER G+ + I + Sbjct: 109 DTHDLDFKYRNILGFLKEGNKVKVTIRFRGRELAHTHLGYGILEGILERIGDANYILESP 168 Query: 120 PKFEGRQMIMILSSKC 135 K EG+ M ++++ K Sbjct: 169 AKMEGKTMFLVIAPKS 184 >gi|154249347|ref|YP_001410172.1| translation initiation factor IF-3 [Fervidobacterium nodosum Rt17-B1] gi|154153283|gb|ABS60515.1| translation initiation factor IF-3 [Fervidobacterium nodosum Rt17-B1] Length = 176 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDL+ + + P V +ILD K +Y + K +A++ QK +KE+K RPVI Sbjct: 41 IDLAKSKGLDLILVAPNAQPPVARILDYGKYKYELAKREQKAKRNQKIIEVKEMKFRPVI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK I FL +G KVK++V FRGRE+ + G+E+L I +I ++ E Sbjct: 101 NEHDYQTKLKHIKRFLSEGNKVKVTVMFRGRELAFVEKGKEILDRISNDIADIGSVEKEA 160 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 161 KMEGRDMWMVLKPK 174 >gi|332521037|ref|ZP_08397495.1| translation initiation factor IF-3 [Lacinutrix algicola 5H-3-7-4] gi|332043130|gb|EGI79327.1| translation initiation factor IF-3 [Lacinutrix algicola 5H-3-7-4] Length = 153 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVEI P VCKI+D +K Y +K + K IKE++ P Sbjct: 19 LAIAEEQELDLVEISPKADPPVCKIMDYKKFLYEQKKRDKALKSKATKVVIKEIRFGPQT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ P Sbjct: 79 DDHDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEELGKVEQMP 138 Query: 121 KFEGRQMIMILSSKC 135 + EG++M M ++ K Sbjct: 139 RLEGKRMTMFIAPKK 153 >gi|224534224|ref|ZP_03674802.1| translation initiation factor IF-3 [Borrelia spielmanii A14S] gi|224514326|gb|EEF84642.1| translation initiation factor IF-3 [Borrelia spielmanii A14S] Length = 186 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG +L +I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYGILDSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|260219597|emb|CBA26442.1| Translation initiation factor IF-3 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 179 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA + ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKE+K RP Sbjct: 29 LRMAGDLDVDLVEIAATANPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEIKFRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +K++ I FL DG K KI+++FRGREI HQ++G +L +++ G+ ++ P Sbjct: 89 DDGDYNIKMRNIKRFLADGDKCKITLRFRGREITHQEIGLAMLQRMRDELGDTIIVEQFP 148 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 149 KLEGRQMIMMIAP 161 >gi|291287862|ref|YP_003504678.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM 12809] gi|290885022|gb|ADD68722.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM 12809] Length = 184 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 87/133 (65%), Gaps = 2/133 (1%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRPVI 60 +A +A LDLVEI + P VC+++D K ++ K EARKKQ+ KEVK RP I Sbjct: 46 LADQAGLDLVEIAPTAKPPVCRVMDYSKFKFEKNKKDREARKKQRANQVDTKEVKFRPKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +VK+K + FL G KVK+ +++RGRE+M Q++G +LL+ IK+ + +D +P Sbjct: 106 EEHDYEVKMKNVKKFLSAGDKVKVVLRYRGREMMFQEMGLQLLNRIKDDIEGLGTVDKKP 165 Query: 121 KFEGRQMIMILSS 133 + +GRQ IM++S Sbjct: 166 EMQGRQQIMMVSP 178 >gi|332141017|ref|YP_004426755.1| Translation initiation factor 3 [Alteromonas macleodii str. 'Deep ecotype'] gi|327551039|gb|AEA97757.1| Translation initiation factor 3 [Alteromonas macleodii str. 'Deep ecotype'] Length = 144 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A+EA+LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 9 RTAEEASLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTD 68 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP- 120 D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K EI+ + P Sbjct: 69 EGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKTDLEEIATCESFPR 128 Query: 121 KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 129 RVEGRQMIMVLAP 141 >gi|77164650|ref|YP_343175.1| initiation factor 3 [Nitrosococcus oceani ATCC 19707] gi|254434829|ref|ZP_05048337.1| translation initiation factor IF-3 [Nitrosococcus oceani AFC27] gi|76882964|gb|ABA57645.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosococcus oceani ATCC 19707] gi|207091162|gb|EDZ68433.1| translation initiation factor IF-3 [Nitrosococcus oceani AFC27] Length = 152 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA DLVEI P VC+I+D K + K A+KKQK IKEVK RP Sbjct: 18 LHVADEAGEDLVEIAPQAEPPVCRIMDYGKYLFEENKKRQAAKKKQKQIQIKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G K K+S++FRGRE+ HQ+LG +LL ++ E ++ P Sbjct: 78 EEGDYQVKLRNLVRFLTEGDKTKVSLRFRGRELAHQELGLKLLERVRNDLEEYGVVEQHP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 138 KREGRQMVMVLAPKK 152 >gi|304397617|ref|ZP_07379494.1| translation initiation factor IF-3 [Pantoea sp. aB] gi|304354789|gb|EFM19159.1| translation initiation factor IF-3 [Pantoea sp. aB] Length = 155 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGGDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 75 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDLDLAIVE 134 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 135 SFPSKIEGRQMIMVLAPKK 153 >gi|71083145|ref|YP_265864.1| translation initiation factor IF-3 [Candidatus Pelagibacter ubique HTCC1062] gi|91762424|ref|ZP_01264389.1| translation initiation factor [Candidatus Pelagibacter ubique HTCC1002] gi|71062258|gb|AAZ21261.1| translation initiation factor IF-3 [Candidatus Pelagibacter ubique HTCC1062] gi|91718226|gb|EAS84876.1| translation initiation factor [Candidatus Pelagibacter ubique HTCC1002] Length = 181 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDL+EI + P VCKI+D+ K +Y QK A A+KKQK +KE+KMRPV Sbjct: 48 ISMAKEQGLDLIEIAPNAKPPVCKIIDMGKFKYDAQKKANVAKKKQKIVLLKEIKMRPVT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K F+ G KVK +++F+GRE+ H LGREL+ IK +I +++ P Sbjct: 108 ETHDYDFKVKNAKKFIGKGDKVKFTIRFKGRELQHSHLGRELMDKIKADMQDIGKVELHP 167 Query: 121 KFEGRQMIMILSS 133 KF+G+QMIM++ Sbjct: 168 KFDGKQMIMVIQP 180 >gi|229591578|ref|YP_002873697.1| translation initiation factor IF-3 [Pseudomonas fluorescens SBW25] gi|259491512|sp|C3JZN6|IF3_PSEFS RecName: Full=Translation initiation factor IF-3 gi|229363444|emb|CAY50643.1| translation initiation factor IF-3 [Pseudomonas fluorescens SBW25] Length = 183 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E+ LDLVEI + P VC+++D K + +K A+K QK +KE+K RP Sbjct: 47 LRIAEESKLDLVEISADAIPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL DG + K+S++FRGRE+ HQ+LG ELL ++ E ++ P Sbjct: 107 EEGDYQVKLRNLVRFLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLLEYGSVEQHP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+++ K Sbjct: 167 KMEGRQLIMVIAPKK 181 >gi|168206055|ref|ZP_02632060.1| translation initiation factor IF-3 [Clostridium perfringens E str. JGS1987] gi|168215520|ref|ZP_02641145.1| translation initiation factor IF-3 [Clostridium perfringens NCTC 8239] gi|169343705|ref|ZP_02864704.1| translation initiation factor IF-3 [Clostridium perfringens C str. JGS1495] gi|169298265|gb|EDS80355.1| translation initiation factor IF-3 [Clostridium perfringens C str. JGS1495] gi|170662462|gb|EDT15145.1| translation initiation factor IF-3 [Clostridium perfringens E str. JGS1987] gi|182382354|gb|EDT79833.1| translation initiation factor IF-3 [Clostridium perfringens NCTC 8239] Length = 173 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 RMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPKKA 173 >gi|307545105|ref|YP_003897584.1| translation initiation factor IF-3 [Halomonas elongata DSM 2581] gi|307217129|emb|CBV42399.1| translation initiation factor IF-3 [Halomonas elongata DSM 2581] Length = 163 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A +DLV+I + P VCKI+D K + +K +KKQK +KEVK RP Sbjct: 29 LERAEAAGMDLVQIS-NADPIVCKIMDYGKFVFEQKKQKAAQKKKQKQIQVKEVKFRPGT 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVK+K + FL G K K++++FRGRE+ HQD+GR+L+ I EI ++ P Sbjct: 88 DEGDYQVKMKNLTRFLESGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEEIGTVESFP 147 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIMI++ K Sbjct: 148 KMEGRQMIMIIAPKK 162 >gi|300114473|ref|YP_003761048.1| translation initiation factor IF-3 [Nitrosococcus watsonii C-113] gi|299540410|gb|ADJ28727.1| translation initiation factor IF-3 [Nitrosococcus watsonii C-113] Length = 152 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA DLVEI P VC+I+D K + K A+KKQK IKEVK RP Sbjct: 18 LHVADEAGEDLVEIAPQADPPVCRIMDYGKYLFEENKKRQAAKKKQKQIQIKEVKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+++ FL +G K K+S++FRGRE+ HQ+LG +LL ++ E ++ P Sbjct: 78 EEGDYQVKLRSLVRFLTEGDKTKVSLRFRGRELAHQELGLKLLERVRNDLEEYGVVEQHP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 138 KREGRQMVMVLAPKK 152 >gi|303325498|ref|ZP_07355941.1| translation initiation factor IF-3 [Desulfovibrio sp. 3_1_syn3] gi|302863414|gb|EFL86345.1| translation initiation factor IF-3 [Desulfovibrio sp. 3_1_syn3] Length = 176 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP Sbjct: 42 IALAKEGGMDLVEVASTSEPPVCRIMDYGKFKYEQQKKKAEAKKRQTVVQIKEIKVRPKT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KL+ I FL DG + KI+V FRGREI+H+D G +L + + +++++D EP Sbjct: 102 DDHDYETKLRHIRRFLEDGDRCKITVFFRGREIVHKDRGLNILERVVQDLADVAKVDQEP 161 Query: 121 KFEGRQMIMILSSKC 135 + EGR + M+L K Sbjct: 162 RAEGRTLQMLLVPKK 176 >gi|188533976|ref|YP_001907773.1| Translation initiation factor IF-3 [Erwinia tasmaniensis Et1/99] gi|259908577|ref|YP_002648933.1| Translation initiation factor IF-3 [Erwinia pyrifoliae Ep1/96] gi|188029018|emb|CAO96886.1| Translation initiation factor IF-3 [Erwinia tasmaniensis Et1/99] gi|224964199|emb|CAX55706.1| Translation initiation factor IF-3 [Erwinia pyrifoliae Ep1/96] gi|283478546|emb|CAY74462.1| Translation initiation factor IF-3 [Erwinia pyrifoliae DSM 12163] gi|310767523|gb|ADP12473.1| Translation initiation factor IF-3 [Erwinia sp. Ejp617] Length = 141 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 61 DDGDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAVVE 120 Query: 118 CEP-KFEGRQMIMILSSKC 135 P + EGRQMIM+L+ K Sbjct: 121 SFPTRIEGRQMIMVLAPKK 139 >gi|298206754|ref|YP_003714933.1| translation initiation factor IF-3 [Croceibacter atlanticus HTCC2559] gi|83849385|gb|EAP87253.1| translation initiation factor IF-3 [Croceibacter atlanticus HTCC2559] Length = 155 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P V K++D +K Y +K + K +KE++ P Sbjct: 19 IKIAEEQGLDLVEISPNAEPPVAKVMDYKKFLYEQKKREKAIKAKASKVVVKEIRFGPNT 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL++G K+K V F+GR I+ +D G LL + + ++ +++ P Sbjct: 79 DDHDYEFKKNHGEKFLKEGAKLKAYVFFKGRSIVFKDQGEILLLRLAQDLEDVGKVEQMP 138 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M M ++ K Sbjct: 139 KLEGKRMTMFIAPKKT 154 >gi|163788631|ref|ZP_02183076.1| translation initiation factor IF-3 [Flavobacteriales bacterium ALC-1] gi|159875868|gb|EDP69927.1| translation initiation factor IF-3 [Flavobacteriales bacterium ALC-1] Length = 134 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 76/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA E LDLVEI + P VCKI+D +K Y +K + K +KE++ P D Sbjct: 1 MADEQGLDLVEISPNANPPVCKIMDYKKFLYEQKKREKALKSKATKVVVKEIRFGPNTDD 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL+DG K+K V F+GR I+ ++ G+ LL + + E +++ PK Sbjct: 61 HDYEFKKKHAEKFLKDGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEEYGKVEQMPKL 120 Query: 123 EGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 121 EGKRMIMFIAPKK 133 >gi|15594535|ref|NP_212324.1| translation initiation factor IF-3 [Borrelia burgdorferi B31] gi|195941921|ref|ZP_03087303.1| translation initiation factor IF-3 [Borrelia burgdorferi 80a] gi|216264263|ref|ZP_03436255.1| translation initiation factor IF-3 [Borrelia burgdorferi 156a] gi|218249678|ref|YP_002374718.1| translation initiation factor IF-3 [Borrelia burgdorferi ZS7] gi|221217563|ref|ZP_03589033.1| translation initiation factor IF-3 [Borrelia burgdorferi 72a] gi|224532816|ref|ZP_03673431.1| translation initiation factor IF-3 [Borrelia burgdorferi WI91-23] gi|224534076|ref|ZP_03674659.1| translation initiation factor IF-3 [Borrelia burgdorferi CA-11.2a] gi|225548524|ref|ZP_03769572.1| translation initiation factor IF-3 [Borrelia burgdorferi 94a] gi|225552487|ref|ZP_03773427.1| translation initiation factor IF-3 [Borrelia sp. SV1] gi|226320901|ref|ZP_03796452.1| translation initiation factor IF-3 [Borrelia burgdorferi 29805] gi|226321508|ref|ZP_03797034.1| translation initiation factor IF-3 [Borrelia burgdorferi Bol26] gi|3913890|sp|O51208|IF3_BORBU RecName: Full=Translation initiation factor IF-3 gi|226707353|sp|B7J1C3|IF3_BORBZ RecName: Full=Translation initiation factor IF-3 gi|2688074|gb|AAC66571.1| translation initiation factor 3 (infC) [Borrelia burgdorferi B31] gi|215980736|gb|EEC21543.1| translation initiation factor IF-3 [Borrelia burgdorferi 156a] gi|218164866|gb|ACK74927.1| translation initiation factor IF-3 [Borrelia burgdorferi ZS7] gi|221192626|gb|EEE18843.1| translation initiation factor IF-3 [Borrelia burgdorferi 72a] gi|224512205|gb|EEF82591.1| translation initiation factor IF-3 [Borrelia burgdorferi WI91-23] gi|224512775|gb|EEF83143.1| translation initiation factor IF-3 [Borrelia burgdorferi CA-11.2a] gi|225370787|gb|EEH00222.1| translation initiation factor IF-3 [Borrelia burgdorferi 94a] gi|225371485|gb|EEH00915.1| translation initiation factor IF-3 [Borrelia sp. SV1] gi|226232697|gb|EEH31450.1| translation initiation factor IF-3 [Borrelia burgdorferi Bol26] gi|226233673|gb|EEH32403.1| translation initiation factor IF-3 [Borrelia burgdorferi 29805] gi|312148032|gb|ADQ30691.1| translation initiation factor IF-3 [Borrelia burgdorferi JD1] gi|312148999|gb|ADQ29070.1| translation initiation factor IF-3 [Borrelia burgdorferi N40] Length = 186 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I GFL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|111115013|ref|YP_709631.1| translation initiation factor IF-3 [Borrelia afzelii PKo] gi|216263783|ref|ZP_03435777.1| translation initiation factor IF-3 [Borrelia afzelii ACA-1] gi|123047048|sp|Q0SNX3|IF3_BORAP RecName: Full=Translation initiation factor IF-3 gi|110890287|gb|ABH01455.1| translation initiation factor 3 [Borrelia afzelii PKo] gi|215979827|gb|EEC20649.1| translation initiation factor IF-3 [Borrelia afzelii ACA-1] Length = 186 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|53728890|ref|ZP_00134599.2| COG0290: Translation initiation factor 3 (IF-3) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207711|ref|YP_001052936.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae L20] gi|307249436|ref|ZP_07531425.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|126096503|gb|ABN73331.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306858510|gb|EFM90577.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 159 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 23 LARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQMKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P Sbjct: 83 DEGDYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 143 GKLEGRQAVMVIAPKK 158 >gi|223889247|ref|ZP_03623835.1| translation initiation factor IF-3 [Borrelia burgdorferi 64b] gi|225549824|ref|ZP_03770788.1| translation initiation factor IF-3 [Borrelia burgdorferi 118a] gi|223885280|gb|EEF56382.1| translation initiation factor IF-3 [Borrelia burgdorferi 64b] gi|225369632|gb|EEG99081.1| translation initiation factor IF-3 [Borrelia burgdorferi 118a] Length = 186 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I GFL+DG KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DAHDLDFKSKNILGFLKDGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|116071706|ref|ZP_01468974.1| translation initiation factor IF-3 [Synechococcus sp. BL107] gi|116065329|gb|EAU71087.1| translation initiation factor IF-3 [Synechococcus sp. BL107] Length = 217 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DSHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEKAEIQQSP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|167623947|ref|YP_001674241.1| translation initiation factor IF-3 [Shewanella halifaxensis HAW-EB4] gi|167353969|gb|ABZ76582.1| translation initiation factor IF-3 [Shewanella halifaxensis HAW-EB4] Length = 142 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA +DLVEI + P VC+++D K + K E +KKQK +KE+K RP D Sbjct: 8 EVADEAGVDLVEISPNAEPPVCRVMDYGKFLFDKAKAQKEQKKKQKIVQVKEIKFRPGTD 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D QVKL+ + FL DG K K++++FRGRE+ HQ LG +LL+ IK I+ ++ PK Sbjct: 68 ENDYQVKLRNLTRFLEDGDKAKVTLRFRGREMAHQSLGMDLLNRIKADLEVIAVVESFPK 127 Query: 122 FEGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 128 MEGRQAVMVLAPKK 141 >gi|317495087|ref|ZP_07953458.1| translation initiation factor IF-3 [Gemella moribillum M424] gi|316914794|gb|EFV36269.1| translation initiation factor IF-3 [Gemella moribillum M424] Length = 175 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ +LD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERLSLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKEKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPKK 173 >gi|219684579|ref|ZP_03539522.1| translation initiation factor IF-3 [Borrelia garinii PBr] gi|219685803|ref|ZP_03540612.1| translation initiation factor IF-3 [Borrelia garinii Far04] gi|219671941|gb|EED28995.1| translation initiation factor IF-3 [Borrelia garinii PBr] gi|219672636|gb|EED29666.1| translation initiation factor IF-3 [Borrelia garinii Far04] Length = 186 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG ++L++I E+ GE++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYDILNSILEKVGEVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|297183124|gb|ADI19267.1| hypothetical protein [uncultured delta proteobacterium HF0200_39L23] Length = 173 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ + EA +DLVE+ P VC+++D K +Y K AR+ QK+ +KEVKM+P I Sbjct: 37 LEQSLEAGMDLVEVSPKSKPPVCRMMDFGKYKYQQSKKQHAARQNQKTIHLKEVKMKPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ FL +G KVK+++ F GR + H+DLG L+ + GE ++ Sbjct: 97 EEHDFQFKVRNTLRFLEEGDKVKVNIMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPV 156 Query: 121 KFEGRQMIMILSS 133 + EGR M MI++ Sbjct: 157 RNEGRSMFMIMAP 169 >gi|260062395|ref|YP_003195475.1| translation initiation factor IF-3 [Robiginitalea biformata HTCC2501] gi|88783958|gb|EAR15129.1| translation initiation factor IF-3 [Robiginitalea biformata HTCC2501] Length = 153 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 74/131 (56%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVEI + P VCKI+D +K Y +K + K +KE++ P D H Sbjct: 19 AEEIGLDLVEISPTADPPVCKIMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNTDDH 78 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K K + FL+DG K+K V F+GR I+++D G LL + + + +++ PK E Sbjct: 79 DYDFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDKGEILLLRLAQDLEDYGKVEQMPKLE 138 Query: 124 GRQMIMILSSK 134 G++M M ++ K Sbjct: 139 GKRMTMFIAPK 149 >gi|312622558|ref|YP_004024171.1| translation initiation factor if-3 [Caldicellulosiruptor kronotskyensis 2002] gi|312203025|gb|ADQ46352.1| translation initiation factor IF-3 [Caldicellulosiruptor kronotskyensis 2002] Length = 166 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ + ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINRFIEKIKDYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|197106433|ref|YP_002131810.1| translation initiation factor IF-3 protein [Phenylobacterium zucineum HLK1] gi|238690134|sp|B4R9C1|IF3_PHEZH RecName: Full=Translation initiation factor IF-3 gi|196479853|gb|ACG79381.1| translation initiation factor IF-3 protein [Phenylobacterium zucineum HLK1] Length = 173 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 64/127 (50%), Positives = 90/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARKKQK +KE+K+RP ID HD +V Sbjct: 47 GLDLVEIVPNADPPVCKILDYGKFKFQEQKKKNEARKKQKVVELKEIKLRPNIDQHDYEV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K +++ F +G KVKI+++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQM Sbjct: 107 KARSMHRFFEEGDKVKITLRFRGRELAHPELGMKLLQKVKVDFEEVAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|307822739|ref|ZP_07652970.1| translation initiation factor IF-3 [Methylobacter tundripaludum SV96] gi|307736343|gb|EFO07189.1| translation initiation factor IF-3 [Methylobacter tundripaludum SV96] Length = 156 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 91/134 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A A+LDLVEI + P VCK+++ K ++ + K A+KKQK +KE+K RP D Sbjct: 21 QIAYAADLDLVEISPNADPPVCKVMNYGKYQFELNKKLAVAKKKQKQVQVKEIKFRPGTD 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+++ FL DG K KI++++RGRE+ H+++G +LL I++ EI+ ++ PK Sbjct: 81 EGDYQVKLRSLTKFLNDGDKTKITLRYRGREMAHREIGVDLLKRIEKDLEEIAIVEQFPK 140 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+++ K Sbjct: 141 MEGRQMVMVMAPKK 154 >gi|317476769|ref|ZP_07936012.1| translation initiation factor IF-3 [Bacteroides eggerthii 1_2_48FAA] gi|316906944|gb|EFV28655.1| translation initiation factor IF-3 [Bacteroides eggerthii 1_2_48FAA] Length = 200 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 73/131 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E DLVEI + P VC+I+D K Y ++K E + KQ +KE++ P Sbjct: 39 LKMAEEMEADLVEISPNAQPPVCRIIDYSKFLYQLKKRQKEQKAKQVKVNVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL DG KVK V F+GR I+ ++ G LL + +++D P Sbjct: 99 DDHDYNFKLKHAKGFLEDGDKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMP 158 Query: 121 KFEGRQMIMIL 131 EG++M + L Sbjct: 159 ILEGKRMTIQL 169 >gi|330836892|ref|YP_004411533.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta coccoides DSM 17374] gi|329748795|gb|AEC02151.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta coccoides DSM 17374] Length = 195 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 3/136 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++ LDLVE+ + P VCKILD K RY +K EA+K Q T IKEV+M+P I Sbjct: 36 VQMAEDLGLDLVEVSPNANPPVCKILDFGKYRYEQEKRMREAKKNQTVTKIKEVRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRI-D 117 + HD++ K +AI FL +G KVKISV+FRGRE+ H +LG+ +L I + G +S I + Sbjct: 96 EKHDMETKSRAITEFLGEGNKVKISVRFRGRELAHTELGKVVLDKILDVLGQNNVSYILE 155 Query: 118 CEPKFEGRQMIMILSS 133 K EGR M + ++ Sbjct: 156 RSAKMEGRMMSITVAP 171 >gi|302670148|ref|YP_003830108.1| translation initiation factor IF-3 InfC [Butyrivibrio proteoclasticus B316] gi|302394621|gb|ADL33526.1| translation initiation factor IF-3 InfC [Butyrivibrio proteoclasticus B316] Length = 199 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 82/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + +DLV I + P VC+++D K +Y + EA+KKQK+ IKE+++ P ID Sbjct: 65 KIADDEGVDLVMIAPTAKPPVCRVVDYGKFKYEQLRKEKEAKKKQKTVEIKEIRLSPNID 124 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G +VKI+++FRGRE+ H +L++ E +++ I+ +PK Sbjct: 125 TNDLNTKVNAAKKFLEKGNRVKITLRFRGREMAHMGASVHILTDFAEALSDVAVIEKQPK 184 Query: 122 FEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 185 VEGRSMTMFLTEKK 198 >gi|70726246|ref|YP_253160.1| translation initiation factor IF-3 [Staphylococcus haemolyticus JCSC1435] gi|68446970|dbj|BAE04554.1| translation initiation factor IF-3 [Staphylococcus haemolyticus JCSC1435] Length = 197 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 61 LEMAEHVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 120 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 121 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 180 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 181 KMEGRQMFIMLAP 193 >gi|260438623|ref|ZP_05792439.1| translation initiation factor IF-3 [Butyrivibrio crossotus DSM 2876] gi|292809217|gb|EFF68422.1| translation initiation factor IF-3 [Butyrivibrio crossotus DSM 2876] Length = 164 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQEA LDL++I + P VCKI D K +Y + EARKKQK+ IKEV++ P I+ Sbjct: 31 KLAQEAELDLIKIAPTAQPPVCKIADYGKYKYEQIRREKEARKKQKTVEIKEVRLSPNIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G KVK++++FRGRE+ H + +L + E+ + S I+ K Sbjct: 91 SNDLNTKVNAARKFLEKGDKVKVTLRFRGRELAHMSSNKHILDDFAEQLADCSVIEKPAK 150 Query: 122 FEGRQMIMILSSK 134 EGR M MIL+ K Sbjct: 151 VEGRSMAMILAEK 163 >gi|124021868|ref|YP_001016175.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9303] gi|166198964|sp|A2C600|IF3_PROM3 RecName: Full=Translation initiation factor IF-3 gi|123962154|gb|ABM76910.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9303] Length = 219 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|76789578|ref|YP_328664.1| translation initiation factor IF-3 [Chlamydia trachomatis A/HAR-13] gi|237803265|ref|YP_002888459.1| translation initiation factor IF-3 [Chlamydia trachomatis B/Jali20/OT] gi|237805186|ref|YP_002889340.1| translation initiation factor IF-3 [Chlamydia trachomatis B/TZ1A828/OT] gi|76168108|gb|AAX51116.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis A/HAR-13] gi|231273486|emb|CAX10402.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis B/TZ1A828/OT] gi|231274499|emb|CAX11295.1| bacterial protein translation initiation factor 3 (IF-3) [Chlamydia trachomatis B/Jali20/OT] Length = 175 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EANLDLVE+ S+ VCKI+D K RY + K +++K Q IKEVK++P I Sbjct: 35 LDLAKEANLDLVEVASNSESPVCKIMDYGKYRYDVTKKEKDSKKAQHRVRIKEVKLKPNI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D K K F+ G KVK+S FRGRE+ + + G +++ + + +I ++ EP Sbjct: 95 DDNDFLTKAKQARAFIEKGNKVKVSCMFRGRELAYPEHGHKVIQRMCQGLEDIGFVESEP 154 Query: 121 KFEGRQMIMILSSKCV 136 K GR +I +++ + Sbjct: 155 KLNGRSLICVIAPGTL 170 >gi|51598451|ref|YP_072639.1| translation initiation factor IF-3 [Borrelia garinii PBi] gi|61213093|sp|Q662H4|IF3_BORGA RecName: Full=Translation initiation factor IF-3 gi|51573022|gb|AAU07047.1| translation initiation factor 3 [Borrelia garinii PBi] Length = 186 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL+DG KVK++++FRGRE+ H LG ++L++I E+ GE++ + + Sbjct: 109 DTHDLDFKSKNILSFLKDGNKVKVTIRFRGRELAHTYLGYDILNSILEKVGEVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|109898813|ref|YP_662068.1| translation initiation factor IF-3 [Pseudoalteromonas atlantica T6c] gi|109701094|gb|ABG41014.1| bacterial translation initiation factor 3 (bIF-3) [Pseudoalteromonas atlantica T6c] Length = 154 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+++NLDLVEI + P VCK++D K + K E +KKQK +KE+K RP Sbjct: 18 LETAEQSNLDLVEISPNAEPPVCKVMDYGKFIFEKSKAQKEQKKKQKQIQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQD+G +LL+ +K +I+ + P Sbjct: 78 DEGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQDIGIDLLNRVKVDLEDIANCESFP 137 Query: 121 -KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 138 NRVEGRQMIMVLAP 151 >gi|14194830|sp|Q9CN42|IF3_PASMU RecName: Full=Translation initiation factor IF-3 Length = 180 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A LDLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP Sbjct: 44 LEMAEQAELDLVEISPNAEPPVCRIMNYGKFLYEKGKAAKEQKKKQKVVQVKEIKFRPGT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+V+FRGRE+ HQD+G E+L +K EIS ++ P Sbjct: 104 DEGDYQVKLRSLIRFLEEGDKAKITVRFRGREMAHQDIGLEVLERVKNDLAEISVVESAP 163 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQ +M+L+ K Sbjct: 164 GRLEGRQAVMVLAPKK 179 >gi|189501973|ref|YP_001957690.1| translation initiation factor IF-3 [Candidatus Amoebophilus asiaticus 5a2] gi|189497414|gb|ACE05961.1| hypothetical protein Aasi_0560 [Candidatus Amoebophilus asiaticus 5a2] Length = 186 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ LDLVEI + P VCKI+D K +Y ++ E + K + T IKE+++ P Sbjct: 49 LKMAQVRELDLVEISPNAEPPVCKIIDYSKFKYEQKRKQREIKSKSQKTTIKEIRLGPNT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K FL++G KVK+ V+F GR I+ ++ G LL + E +I+ P Sbjct: 109 DEHDLNFKIKHATKFLQEGAKVKVYVQFVGRTIVFKERGELLLLKFAQALEEHGKIEHMP 168 Query: 121 KFEGRQMIMILSSK 134 K EGR+M + +S K Sbjct: 169 KLEGRKMHLSISPK 182 >gi|329770371|ref|ZP_08261753.1| translation initiation factor IF-3 [Gemella sanguinis M325] gi|328836494|gb|EGF86154.1| translation initiation factor IF-3 [Gemella sanguinis M325] Length = 175 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQ+A+ +LD+V + + V KI++ K ++ QK EARKKQK KE+++ P I Sbjct: 39 MQIAERLSLDVVLVAPNAKTPVAKIMNYGKFKFEQQKKDKEARKKQKIVTTKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KLK FL KVK+S++F+GR I H+++G+++L N +I+ ++ +P Sbjct: 99 EKHDFETKLKNARKFLAKEDKVKVSIRFKGRAITHKEIGQKVLENFSNEASDIATVEQKP 158 Query: 121 KFEGRQMIMILSSKC 135 K EGR M ++L+ K Sbjct: 159 KMEGRSMFLVLAPKK 173 >gi|317968497|ref|ZP_07969887.1| translation initiation factor IF-3 [Synechococcus sp. CB0205] Length = 213 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L FL+ G KVK +V FRGREI H L +LL + + E + I EP Sbjct: 107 DQHDYDVRLGQASRFLKAGDKVKCTVIFRGREIQHTALAEQLLRRMAKDLEEKAEIQQEP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|282890617|ref|ZP_06299140.1| hypothetical protein pah_c022o224 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499614|gb|EFB41910.1| hypothetical protein pah_c022o224 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 189 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVEI +P VCKI++ K RY K E +K Q +KE+K++P I Sbjct: 31 LARAEEAGLDLVEIVPGSSPPVCKIMNYGKFRYDQTKREKENKKAQHQIRVKEIKIKPNI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL KL+ F++ G KVKI+ FRGRE+MH ++G +L+ + + EI+ + Sbjct: 91 DENDLNTKLRHARDFIQKGNKVKITCTFRGREMMHPEIGEKLVQKLCDELDEIAIPEAPM 150 Query: 121 KFEGRQMIMILSS 133 K GR + ++L+ Sbjct: 151 KMFGRILNVVLAP 163 >gi|163815466|ref|ZP_02206839.1| hypothetical protein COPEUT_01631 [Coprococcus eutactus ATCC 27759] gi|158449103|gb|EDP26098.1| hypothetical protein COPEUT_01631 [Coprococcus eutactus ATCC 27759] Length = 164 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MAQ+A LDLV+I P VCKI+D K RY + EA+KKQK+ +KEV++ P ID Sbjct: 31 KMAQDAGLDLVKIAPKAQPPVCKIVDYGKYRYEQARKEKEAKKKQKTMEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G KVK++++FRGRE+ H + + +L N E+ EI+ +D K Sbjct: 91 SNDLNTKINQARKFLEHGDKVKVTLRFRGRELAHVEQSKVILDNFAEKLAEIAVVDKPAK 150 Query: 122 FEGRQMIMILSSK 134 FEGR MIM L+ K Sbjct: 151 FEGRSMIMFLTQK 163 >gi|116630037|ref|YP_815209.1| translation initiation factor 3 [Lactobacillus gasseri ATCC 33323] gi|238853776|ref|ZP_04644142.1| translation initiation factor IF-3 [Lactobacillus gasseri 202-4] gi|282851343|ref|ZP_06260708.1| translation initiation factor IF-3 [Lactobacillus gasseri 224-1] gi|300361200|ref|ZP_07057377.1| translation initiation factor IF3 [Lactobacillus gasseri JV-V03] gi|311110334|ref|ZP_07711731.1| translation initiation factor IF-3 [Lactobacillus gasseri MV-22] gi|116095619|gb|ABJ60771.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus gasseri ATCC 33323] gi|238833585|gb|EEQ25856.1| translation initiation factor IF-3 [Lactobacillus gasseri 202-4] gi|282557311|gb|EFB62908.1| translation initiation factor IF-3 [Lactobacillus gasseri 224-1] gi|300353819|gb|EFJ69690.1| translation initiation factor IF3 [Lactobacillus gasseri JV-V03] gi|311065488|gb|EFQ45828.1| translation initiation factor IF-3 [Lactobacillus gasseri MV-22] Length = 172 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A+LDLV + + P V +I+D K R+ QK A E RK QK +KE+++ P I Sbjct: 31 LRKAADADLDLVLLSPNAKPPVARIMDYGKFRFEQQKKAKENRKNQKVMAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KLK + FL G KV++S++FRGR I H++LG+++L + + ++S + +P Sbjct: 91 EGNDFDTKLKHVRKFLTKGAKVRVSIRFRGRAITHKELGKQVLEKMADEASDLSNVVTKP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M ++L+ Sbjct: 151 KMEGRSMFLMLAP 163 >gi|224531854|ref|ZP_03672486.1| translation initiation factor IF-3 [Borrelia valaisiana VS116] gi|224511319|gb|EEF81725.1| translation initiation factor IF-3 [Borrelia valaisiana VS116] Length = 186 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLVE+ +V+P VCKI+D K ++ +K E +K QK +KEV+M+P I Sbjct: 49 IKKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKRQKEQKKNQKVIKLKEVRMQPKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI-DCE 119 D HDL K K I FL++G KVK++++FRGRE+ H LG +L++I E+ G+++ + + Sbjct: 109 DTHDLDFKSKNILTFLKEGNKVKVTIRFRGRELAHTYLGYGILNSILEKVGDVNYVLESA 168 Query: 120 PKFEGRQMIMILSSK 134 K EG+ M +I++ K Sbjct: 169 AKMEGKTMFLIVAPK 183 >gi|148241189|ref|YP_001226346.1| translation initiation factor IF-3 [Synechococcus sp. RCC307] gi|166233786|sp|A5GQ34|IF3_SYNR3 RecName: Full=Translation initiation factor IF-3 gi|147849499|emb|CAK26993.1| Translation initiation factor IF-3 [Synechococcus sp. RCC307] Length = 215 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +LL + + E + + P Sbjct: 107 DAHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAEKLLMRMAKDLEESAEVQQPP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L + Sbjct: 167 KREGRNMIMFLGPRKT 182 >gi|90994422|ref|YP_536912.1| translation initiation factor 3 [Porphyra yezoensis] gi|115502191|sp|Q1XDQ6|IF3C_PORYE RecName: Full=Translation initiation factor IF-3, chloroplastic gi|90818986|dbj|BAE92355.1| initiation factor 3 [Porphyra yezoensis] Length = 182 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 85/136 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + LDLV + P VC+ILD K ++T +K A EA+KKQ ++ IKEVKMR I Sbjct: 46 IQLAVQQGLDLVVVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQHNSSIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +V++ F++ G KVK ++ FRGREI H +L +LL+ + I+ I P Sbjct: 106 EEHDYKVRINQASKFIQAGDKVKATITFRGREIQHSNLAIDLLNKMASDLNAIAEIQQAP 165 Query: 121 KFEGRQMIMILSSKCV 136 +GR +IM+LS K V Sbjct: 166 SRDGRNVIMLLSPKKV 181 >gi|323341711|ref|ZP_08081944.1| translation initiation factor IF3 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464136|gb|EFY09329.1| translation initiation factor IF3 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 196 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E NLDL+ + + P VCKI+D + R+ +QK A EA+K Q T IK +++ PVI Sbjct: 60 LEKAFEHNLDLLCVAPNGNPPVCKIVDYGRYRFELQKKAKEAKKHQHVTQIKPLRLSPVI 119 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ +L +G KVK+ ++FRGR I ++GR+ + + E ++ ++ P Sbjct: 120 DQHDFDTKLRHARKWLEEGIKVKVDMRFRGRLITRLEVGRKTMDSFIEECSDLGSVEKRP 179 Query: 121 KFEGRQMIMILSS 133 K EG M +++S Sbjct: 180 KLEGNTMSVVISP 192 >gi|11465697|ref|NP_053841.1| translation initiation factor 3 [Porphyra purpurea] gi|1708415|sp|P51231|IF3C_PORPU RecName: Full=Translation initiation factor IF-3, chloroplastic gi|1276697|gb|AAC08117.1| initiation factor 3 [Porphyra purpurea] Length = 182 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 84/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A + LDLV + P VC+ILD K ++T +K A EA+KKQ ++ IKEVKMR I Sbjct: 46 IQLATKQGLDLVLVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQHNSSIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD +V++ FL+ G KVK ++ FRGREI H +L LL+ + I+ I P Sbjct: 106 EEHDYKVRINQASKFLQSGDKVKATITFRGREIQHSNLAINLLNKMAADLVTIAEIQQAP 165 Query: 121 KFEGRQMIMILSSKCV 136 +GR +IM+LS K V Sbjct: 166 SRDGRNVIMLLSPKKV 181 >gi|167626331|ref|YP_001676831.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668764|ref|ZP_04756342.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596332|gb|ABZ86330.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 155 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EAN+DLVE+ ++ P VC+++D K + K +A+K QK T IKE+K+RPV Sbjct: 20 LALAEEANVDLVEMVANANPPVCRLMDYGKFLFEQGKKKAQAKKNQKQTQIKEIKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H +LG ++L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHNELGMQMLQRMASDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 140 KMEGRQMIMVLGPKK 154 >gi|42519518|ref|NP_965448.1| translation initiation factor IF-3 [Lactobacillus johnsonii NCC 533] gi|227889529|ref|ZP_04007334.1| translation initiation factor IF3 [Lactobacillus johnsonii ATCC 33200] gi|268319907|ref|YP_003293563.1| translation initiation factor IF-3 [Lactobacillus johnsonii FI9785] gi|61213124|sp|Q74IC4|IF3_LACJO RecName: Full=Translation initiation factor IF-3 gi|41583807|gb|AAS09414.1| translation initiation factor IF-3 [Lactobacillus johnsonii NCC 533] gi|227850007|gb|EEJ60093.1| translation initiation factor IF3 [Lactobacillus johnsonii ATCC 33200] gi|262398282|emb|CAX67296.1| translation initiation factor IF-3 [Lactobacillus johnsonii FI9785] gi|329667757|gb|AEB93705.1| translation initiation factor IF-3 [Lactobacillus johnsonii DPC 6026] Length = 172 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A+LDLV + + P V +I+D K R+ QK A E RK QK +KE+++ P I Sbjct: 31 LRKAADADLDLVLLSPNAKPPVARIMDYGKFRFEQQKKAKENRKNQKVMAVKEIRLSPTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D KLK + FL G KV++S++FRGR I H++LG+++L + + ++S + +P Sbjct: 91 EGNDFDTKLKHVRKFLTKGAKVRVSIRFRGRAITHKELGKQVLEKMADEASDLSNVVTKP 150 Query: 121 KFEGRQMIMILSS 133 K EGR M ++L+ Sbjct: 151 KMEGRSMFLMLAP 163 >gi|73748564|ref|YP_307803.1| translation initiation factor IF-3 [Dehalococcoides sp. CBDB1] gi|147669324|ref|YP_001214142.1| translation initiation factor 3 [Dehalococcoides sp. BAV1] gi|73660280|emb|CAI82887.1| translation initiation factor IF-3 [Dehalococcoides sp. CBDB1] gi|146270272|gb|ABQ17264.1| bacterial translation initiation factor 3 (bIF-3) [Dehalococcoides sp. BAV1] Length = 157 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 79/135 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ + P VC+++D K R+ K EA++ QK + +KE+++RP I Sbjct: 8 EQARKINLDLVEVAPTAVPPVCRLMDYGKYRFEQTKKDREAKRTQKVSLLKEIRVRPKIG 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ L G KVK++V FRGREI H +LG LL + + +I+ I+ +P Sbjct: 68 EHDFDAKARSARKQLESGDKVKLTVMFRGREITHAELGLRLLKKMADSLTDIATIEGQPS 127 Query: 122 FEGRQMIMILSSKCV 136 G +M + L K Sbjct: 128 LLGSRMHLTLLPKAA 142 >gi|16125301|ref|NP_419865.1| translation initiation factor IF-3 [Caulobacter crescentus CB15] gi|221234038|ref|YP_002516474.1| translation initiation factor IF-3 [Caulobacter crescentus NA1000] gi|20138514|sp|Q9A9D9|IF3_CAUCR RecName: Full=Translation initiation factor IF-3 gi|254803485|sp|B8H312|IF3_CAUCN RecName: Full=Translation initiation factor IF-3 gi|13422345|gb|AAK23033.1| translation initiation factor IF-3 [Caulobacter crescentus CB15] gi|220963210|gb|ACL94566.1| bacterial protein translation initiation factor 3 (IF-3) [Caulobacter crescentus NA1000] Length = 173 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 64/127 (50%), Positives = 89/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID HD V Sbjct: 47 GLDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKVVELKEIKLRPNIDSHDYDV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F +G KVK++++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQM Sbjct: 107 KAKAMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLQKVKADFDEVAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|57234473|ref|YP_181486.1| translation initiation factor IF-3 [Dehalococcoides ethenogenes 195] gi|57224921|gb|AAW39978.1| translation initiation factor IF-3 [Dehalococcoides ethenogenes 195] Length = 168 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 80/134 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ + P VC+++D K R+ K EA+K QK + +KE+++RP I Sbjct: 19 EQARKINLDLVEVAPTAVPPVCRLMDYGKYRFEQTKKDREAKKTQKVSLLKEIRVRPKIG 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ L G KVK++V FRGREI H +LG +LL + + +I+ I+ +P Sbjct: 79 EHDFDAKARSARKQLECGDKVKLTVMFRGREITHAELGLKLLKKMADSLTDIATIEGQPS 138 Query: 122 FEGRQMIMILSSKC 135 G +M + L K Sbjct: 139 LLGSRMHLTLLPKA 152 >gi|227872174|ref|ZP_03990541.1| translation initiation factor IF3 [Oribacterium sinus F0268] gi|227841957|gb|EEJ52220.1| translation initiation factor IF3 [Oribacterium sinus F0268] Length = 208 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 82/134 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A+EA LDL++I ++ P V +I D K RY + + EARK Q +T +KE++M P ID Sbjct: 75 QKAREAELDLIKIAATAQPPVVRIADYGKYRYELLRKEKEARKNQHTTELKEIRMTPNID 134 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL KL A FL G KVKI+++FRGRE+ + + +L E+ +I+ +D K Sbjct: 135 TNDLNTKLSAARKFLEKGNKVKIALRFRGREMSRMNQSKYILDEFGEKLSDIAVLDKAAK 194 Query: 122 FEGRQMIMILSSKC 135 EGR M ++LS K Sbjct: 195 VEGRNMAVVLSPKK 208 >gi|110799853|ref|YP_696574.1| translation initiation factor IF-3 [Clostridium perfringens ATCC 13124] gi|110674500|gb|ABG83487.1| translation initiation factor IF-3 [Clostridium perfringens ATCC 13124] Length = 173 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 39 KMADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 99 KHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR MIMIL+ K Sbjct: 159 LEGRNMIMILAPKKA 173 >gi|304382818|ref|ZP_07365301.1| translation initiation factor IF3 [Prevotella marshii DSM 16973] gi|304336003|gb|EFM02250.1| translation initiation factor IF3 [Prevotella marshii DSM 16973] Length = 227 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 74/136 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA++ +DLVEI + P VC+I+D K Y +K A E + KQ +KE++ P Sbjct: 38 LDMARQQGVDLVEISPNAQPPVCRIIDYSKFLYQQKKKAKELKAKQVKVEVKEIRFGPQT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL DG KV+ V FRGR I+ ++ G LL E +++ P Sbjct: 98 DDHDYNFKLKHAKEFLEDGNKVRAYVFFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMP 157 Query: 121 KFEGRQMIMILSSKCV 136 + EG++M + ++ K Sbjct: 158 RLEGKKMFLFIAPKKA 173 >gi|332993606|gb|AEF03661.1| translation initiation factor IF-3 [Alteromonas sp. SN2] Length = 186 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA+LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 50 KLAEEASLDLVEISPNAEPPVCKVMDYGKFLFEKSKAQKEQKKKQKQIQVKEIKFRPGTD 109 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP- 120 D QVKL+ + FL G K K++++FRGRE+ HQ++G ELL+ +K EI+ + P Sbjct: 110 EGDYQVKLRNLRRFLEGGDKAKVTIRFRGREMAHQEIGIELLNRVKADLEEIAVCESFPR 169 Query: 121 KFEGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 170 RVEGRQMIMVLAP 182 >gi|167645161|ref|YP_001682824.1| translation initiation factor IF-3 [Caulobacter sp. K31] gi|189028352|sp|B0SY03|IF3_CAUSK RecName: Full=Translation initiation factor IF-3 gi|167347591|gb|ABZ70326.1| translation initiation factor IF-3 [Caulobacter sp. K31] Length = 173 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/127 (50%), Positives = 90/127 (70%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID+HD V Sbjct: 47 GLDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKIVELKEIKLRPNIDIHDYDV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K K++ F +G KVK++++FRGRE+ H +LG +LL +K F EI++++ EP+ EGRQM Sbjct: 107 KAKSMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLLKVKADFDEIAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|256372443|ref|YP_003110267.1| translation initiation factor IF-3 [Acidimicrobium ferrooxidans DSM 10331] gi|256009027|gb|ACU54594.1| translation initiation factor IF-3 [Acidimicrobium ferrooxidans DSM 10331] Length = 170 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ ++DLVE+ P V KI+D K ++ + E ++K ++ +KE+K RP I Sbjct: 29 LQIARAMDMDLVEVAPMAKPPVAKIMDYGKFKFDQAQRVREQKRKASASQLKEMKYRPKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D K + + FL +G KVK+++ FRGRE+ H +LG+E+L+ + E ++ ++ P Sbjct: 89 SQGDFDTKTRQVAKFLAEGHKVKVTIMFRGREVFHPELGQEILTRVVEAVKGVAHVEVMP 148 Query: 121 KFEGRQMIMILSS 133 K +GR M+M+L+ Sbjct: 149 KLDGRNMVMVLAP 161 >gi|116074375|ref|ZP_01471637.1| translation initiation factor IF-3 [Synechococcus sp. RS9916] gi|116069680|gb|EAU75432.1| translation initiation factor IF-3 [Synechococcus sp. RS9916] Length = 218 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LSVAQERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|20138491|sp|Q92HK6|IF3_RICCN RecName: Full=Translation initiation factor IF-3 Length = 186 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|325109129|ref|YP_004270197.1| bacterial translation initiation factor 3 (bIF-3) [Planctomyces brasiliensis DSM 5305] gi|324969397|gb|ADY60175.1| bacterial translation initiation factor 3 (bIF-3) [Planctomyces brasiliensis DSM 5305] Length = 151 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +AQEA LDLVE+ P VC+I+D K +Y +K + K T +KE+++RP I Sbjct: 18 MSIAQEAGLDLVEVAPDARPPVCRIMDYGKFKYEQKKRQSKNTK-VHQTQLKEIRLRPKI 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KVK++V FRGRE H + GR++L++I +I++++ P Sbjct: 77 GDHDIEFKMKKARDFLVHRDKVKLTVMFRGRENAHHERGRDVLNSIVADLEDIAKLEKPP 136 Query: 121 KFE-GRQMIMILSSK 134 E GR M IL+ + Sbjct: 137 GMESGRSMTAILAPR 151 >gi|295690589|ref|YP_003594282.1| translation initiation factor IF-3 [Caulobacter segnis ATCC 21756] gi|295432492|gb|ADG11664.1| translation initiation factor IF-3 [Caulobacter segnis ATCC 21756] Length = 173 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 63/127 (49%), Positives = 91/127 (71%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILD K ++ QK EARK+QK +KE+K+RP ID+HD +V Sbjct: 47 GLDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKVVELKEIKLRPNIDVHDYEV 106 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K K++ F +G KVK++++FRGRE+ H +LG +LL +K F E+++++ EP+ EGRQM Sbjct: 107 KAKSMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLLKVKADFDEVAKVEYEPRMEGRQM 166 Query: 128 IMILSSK 134 IMIL+ + Sbjct: 167 IMILAPR 173 >gi|82524023|emb|CAI78701.1| translation initiation factor 3 [uncultured Flavobacteriaceae bacterium] Length = 181 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + P VCK++D +K Y +K + K IKE++ P Sbjct: 47 VKIADEQGLDLVEISPNADPPVCKVMDYKKFLYEQKKRDKVIKAKATKVIIKEIRFGPQT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E +++ P Sbjct: 107 DDHDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIIFKEQGQILLLKLAQDLEEYGKVEQMP 166 Query: 121 KFEGRQMIMILSSKC 135 + EG++M M L+ K Sbjct: 167 RLEGKRMTMFLAPKK 181 >gi|317499155|ref|ZP_07957432.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 5_1_63FAA] gi|291560798|emb|CBL39598.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SSC/2] gi|316893568|gb|EFV15773.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 165 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 82/133 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I P VCKI+D K +Y + A+KKQK +KEV+M P ID Sbjct: 31 KLADEAGLDLVKISPKAKPPVCKIIDYGKYKYEQTRKEKLAKKKQKVIDVKEVRMSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G +VK++++FRGRE+ H + + +L + + +++ ID +PK Sbjct: 91 TNDLNTKINHAKKFLAKGARVKVTLRFRGRELAHVNASKYILDDFAKALEDVATIDKKPK 150 Query: 122 FEGRQMIMILSSK 134 FEGR M M L+ K Sbjct: 151 FEGRSMTMFLAPK 163 >gi|126663527|ref|ZP_01734524.1| translation initiation factor IF-3 [Flavobacteria bacterium BAL38] gi|126624475|gb|EAZ95166.1| translation initiation factor IF-3 [Flavobacteria bacterium BAL38] Length = 161 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VCK++D K Y +K E + K +KE++ P Sbjct: 25 LRFAEEQEVDLVEISPNAEPPVCKLMDYGKFLYQQKKRDKELKAKSTQIVVKEIRFGPQT 84 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K FL+DG K+K V F+GR I++++ G+ LL + + E +++ P Sbjct: 85 DEHDYEFKKKNALKFLQDGAKLKAFVFFKGRSIIYKEQGQILLLRLAQELEEFGKVEAMP 144 Query: 121 KFEGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 145 VLEGKRMIMYIAPKK 159 >gi|291087590|ref|ZP_06346860.2| translation initiation factor IF-3 [Clostridium sp. M62/1] gi|291074603|gb|EFE11967.1| translation initiation factor IF-3 [Clostridium sp. M62/1] Length = 200 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLV+I + P VCKI+D K RY + EA+KKQK +KEV++ P ID Sbjct: 67 KLAREAELDLVKIAPTAKPPVCKIIDYGKFRYEQARKEKEAKKKQKVIEVKEVRLSPNID 126 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A F+ G KVKI+++FRGRE+ H + +L + E+ +I+ +D K Sbjct: 127 DNDLNTKVSAARKFIEKGNKVKITLRFRGREMAHMSKTKYILDDFAEKLSDIAVVDKPSK 186 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 187 VEGRSIVMFLTAK 199 >gi|113953559|ref|YP_729327.1| translation initiation factor IF-3 [Synechococcus sp. CC9311] gi|123328048|sp|Q0IDZ5|IF3_SYNS3 RecName: Full=Translation initiation factor IF-3 gi|113880910|gb|ABI45868.1| translation initiation factor IF-3 [Synechococcus sp. CC9311] Length = 212 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKA 182 >gi|51473712|ref|YP_067469.1| translation initiation factor IF-3 [Rickettsia typhi str. Wilmington] gi|61213099|sp|Q68WK5|IF3_RICTY RecName: Full=Translation initiation factor IF-3 gi|51460024|gb|AAU03987.1| translation initiation factor IF-3 [Rickettsia typhi str. Wilmington] Length = 185 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYENKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIISP 181 >gi|295093749|emb|CBK82840.1| bacterial translation initiation factor 3 (bIF-3) [Coprococcus sp. ART55/1] Length = 164 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 62/133 (46%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MAQ+A LDLV+I P VCKI+D K RY + EA+KKQK+ +KEV++ P ID Sbjct: 31 KMAQDAGLDLVKIAPKAQPPVCKIVDYGKYRYEQARKEKEAKKKQKTMEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G KVK++++FRGRE+ H + + +L N E+ EI+ ID K Sbjct: 91 ANDLNTKINQARKFLEHGDKVKVTLRFRGRELAHVEQSKVILDNFAEKLAEIAVIDKPAK 150 Query: 122 FEGRQMIMILSSK 134 FEGR MIM L+ K Sbjct: 151 FEGRSMIMFLTQK 163 >gi|91205116|ref|YP_537471.1| translation initiation factor IF-3 [Rickettsia bellii RML369-C] gi|91068660|gb|ABE04382.1| Translation initiation factor IF-3 [Rickettsia bellii RML369-C] Length = 147 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K RY +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNADPPVCKILDFGKFRYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+D+G EL I+ +++ID + Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKDVGEELFKRIEVGLEGLAKIDQQA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|300716459|ref|YP_003741262.1| translation initiation factor IF-3 [Erwinia billingiae Eb661] gi|299062295|emb|CAX59412.1| Translation initiation factor IF-3 [Erwinia billingiae Eb661] Length = 141 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 4/139 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 1 MEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG---EISRID 117 D D QVKL+ + FL +G K KI+++FRGRE+ HQ +G E+L+ +++ +++ ++ Sbjct: 61 DDGDYQVKLRNLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAIVE 120 Query: 118 CEP-KFEGRQMIMILSSKC 135 P K EGRQMIM+L+ K Sbjct: 121 SFPSKIEGRQMIMVLAPKK 139 >gi|322419730|ref|YP_004198953.1| translation initiation factor IF-3 [Geobacter sp. M18] gi|320126117|gb|ADW13677.1| translation initiation factor IF-3 [Geobacter sp. M18] Length = 177 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 41 LALAESLQLDLVEVSPTAVPPVCRIMDYGKFKYQQAKKQAEAKKKQVQVELKEVKLRPKT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL+ K+K + FL +G K KI+V FRGREI HQ+LG L +I+ ++ Sbjct: 101 DVHDLEFKVKHVRRFLEEGNKAKITVVFRGREITHQELGMAALEKFAAELADIALVEVRQ 160 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 161 KMEGRSMFMIVAPKV 175 >gi|197334910|ref|YP_002156017.1| translation initiation factor IF-3 [Vibrio fischeri MJ11] gi|197316400|gb|ACH65847.1| translation initiation factor IF-3 [Vibrio fischeri MJ11] Length = 156 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP Sbjct: 20 LDAALEAGVDLVEISPNAEPPVCRVMDYGKFLFEKAKAAKEQKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 80 DIGDYQVKLRNLTGFLEDGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 139 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 140 TRIEGRQMIMVLAPKK 155 >gi|134282396|ref|ZP_01769101.1| translation initiation factor IF-3 [Burkholderia pseudomallei 305] gi|226199659|ref|ZP_03795212.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pakistan 9] gi|254297838|ref|ZP_04965291.1| translation initiation factor IF-3 [Burkholderia pseudomallei 406e] gi|134246434|gb|EBA46523.1| translation initiation factor IF-3 [Burkholderia pseudomallei 305] gi|157807599|gb|EDO84769.1| translation initiation factor IF-3 [Burkholderia pseudomallei 406e] gi|225928245|gb|EEH24279.1| translation initiation factor IF-3 [Burkholderia pseudomallei Pakistan 9] Length = 126 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 77/124 (62%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI P VC+++D K +Y K EA+ KQK +KEVK RP D D VKL+ Sbjct: 1 MEIAPQAAPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL +G K KI+++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+L Sbjct: 61 LVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVL 120 Query: 132 SSKC 135 S K Sbjct: 121 SPKK 124 >gi|303239878|ref|ZP_07326401.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] gi|302592588|gb|EFL62313.1| translation initiation factor IF-3 [Acetivibrio cellulolyticus CD2] Length = 165 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDLV++ + P VCKI+D K + K EARK QK +KEV++ I+ Sbjct: 30 KIAITKNLDLVKVVPNAAPPVCKIMDYGKSMFEQAKKEKEARKNQKVVSLKEVRLSATIE 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K+K FL+DG KVK+S++FRGRE+ + G+E+L E + ++ +PK Sbjct: 90 EHDFDFKVKNACKFLQDGDKVKVSIRFRGREMKYTVTGKEVLEKFAEAVNGVGIVEKQPK 149 Query: 122 FEGRQMIMILSS 133 EG+ M+MIL+ Sbjct: 150 LEGKSMMMILNP 161 >gi|78211640|ref|YP_380419.1| translation initiation factor IF-3 [Synechococcus sp. CC9605] gi|123756979|sp|Q3ANG8|IF3_SYNSC RecName: Full=Translation initiation factor IF-3 gi|78196099|gb|ABB33864.1| translation initiation factor IF-3 [Synechococcus sp. CC9605] Length = 217 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVARDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|33864629|ref|NP_896188.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102] gi|39931219|sp|Q7UA08|IF3_SYNPX RecName: Full=Translation initiation factor IF-3 gi|33632152|emb|CAE06608.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102] Length = 217 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|291550174|emb|CBL26436.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus torques L2-14] Length = 164 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K +Y + EA+KKQK+ IKEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPGAKPPVCKIIDYGKYKYEQTRKEKEAKKKQKTVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + ++ +++ ++ Sbjct: 90 DTNDLNTKMNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAKQLEDVATVEKAA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRNMSMVLAEK 163 >gi|312877042|ref|ZP_07737015.1| translation initiation factor IF-3 [Caldicellulosiruptor lactoaceticus 6A] gi|311796183|gb|EFR12539.1| translation initiation factor IF-3 [Caldicellulosiruptor lactoaceticus 6A] Length = 166 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + I++ K Sbjct: 151 KLDGKNLTAIIAPK 164 >gi|312127733|ref|YP_003992607.1| translation initiation factor if-3 [Caldicellulosiruptor hydrothermalis 108] gi|311777752|gb|ADQ07238.1| translation initiation factor IF-3 [Caldicellulosiruptor hydrothermalis 108] Length = 166 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKIKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|212704421|ref|ZP_03312549.1| hypothetical protein DESPIG_02476 [Desulfovibrio piger ATCC 29098] gi|212672142|gb|EEB32625.1| hypothetical protein DESPIG_02476 [Desulfovibrio piger ATCC 29098] Length = 176 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP Sbjct: 42 IALAKEAGMDLVEVASTSEPPVCRIMDYGKFKYEQQKKKQEAKKRQSVVQIKEIKVRPKT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KL+ I FL DG + K++V FRGREI+H+D G +L + + +++++D EP Sbjct: 102 DDHDYETKLRHIRRFLEDGDRCKVTVFFRGREIVHKDRGISILERVVQDLADVAKVDQEP 161 Query: 121 KFEGRQMIMILSSKC 135 + EGR + M+L K Sbjct: 162 RAEGRTLQMLLVPKK 176 >gi|153004742|ref|YP_001379067.1| translation initiation factor IF-3 [Anaeromyxobacter sp. Fw109-5] gi|166198947|sp|A7HBI7|IF3_ANADF RecName: Full=Translation initiation factor IF-3 gi|152028315|gb|ABS26083.1| translation initiation factor IF-3 [Anaeromyxobacter sp. Fw109-5] Length = 229 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE +DLVE+ P VCKI+D K +Y +K EA+KKQ +KEVK+RP Sbjct: 46 LARAQELGMDLVEVSPMAKPPVCKIMDYGKFKYLEKKKQNEAKKKQVVVQLKEVKLRPRT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K + FL + K +I+V FRGRE+ H++LG+++L I E E++ I+ P Sbjct: 106 EEHDYATKIKKVREFLGESNKARITVTFRGREMSHRELGQKVLQRIIEDLREVAVIEAAP 165 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 166 RMEGRQMFMILAP 178 >gi|284928971|ref|YP_003421493.1| translation initiation factor 3 [cyanobacterium UCYN-A] gi|284809430|gb|ADB95135.1| bacterial translation initiation factor 3 (bIF-3) [cyanobacterium UCYN-A] Length = 179 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LNTAQEQELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK ++ FRGREI H +L +ELLS + E++ I P Sbjct: 102 DEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHANLAQELLSRMAADLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPKK 176 >gi|154502802|ref|ZP_02039862.1| hypothetical protein RUMGNA_00616 [Ruminococcus gnavus ATCC 29149] gi|153796685|gb|EDN79105.1| hypothetical protein RUMGNA_00616 [Ruminococcus gnavus ATCC 29149] Length = 164 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EANLDLV+I + P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEANLDLVKIAPTAKPPVCKIIDYGKYKYEQTRKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + +++ ++ Sbjct: 90 DTNDLNTKVNNAKKFIGKGNKVKVTLRFRGREMAHVQSSKHILDDFAALLEDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|270158050|ref|ZP_06186707.1| putative translation initiation factor IF-3 [Legionella longbeachae D-4968] gi|269990075|gb|EEZ96329.1| putative translation initiation factor IF-3 [Legionella longbeachae D-4968] Length = 127 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 80/125 (64%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L I++ E + ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERIQQDTAEFAIVEQHAKREGRQLLMVL 120 Query: 132 SSKCV 136 S K Sbjct: 121 SPKKT 125 >gi|326204765|ref|ZP_08194620.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] gi|325985136|gb|EGD45977.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM 2782] Length = 176 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 82/132 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A NLDLV+I ++ P VCKI+D K + K EA+K QK IKEV++ I+ Sbjct: 42 NLAITKNLDLVKIAANSEPPVCKIMDYGKFLFEQGKKEKEAKKNQKVVSIKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK+S+KFRGRE+ + G+E+L+ + E+ + +PK Sbjct: 102 EHDFDVKVKNAYKFLQDGDKVKVSIKFRGREMKYTSDGKEVLAKFAQAVNEVGVPEKQPK 161 Query: 122 FEGRQMIMILSS 133 EG+ MI+IL+ Sbjct: 162 LEGKNMIVILNP 173 >gi|222529195|ref|YP_002573077.1| translation initiation factor IF-3 [Caldicellulosiruptor bescii DSM 6725] gi|222456042|gb|ACM60304.1| translation initiation factor IF-3 [Caldicellulosiruptor bescii DSM 6725] Length = 171 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 36 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ + ++ +P Sbjct: 96 EEHDFNVKVKNAIRFLKDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKDYGVVEKKP 155 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 156 KLDGKNLTAVIAPK 169 >gi|225028457|ref|ZP_03717649.1| hypothetical protein EUBHAL_02731 [Eubacterium hallii DSM 3353] gi|224954207|gb|EEG35416.1| hypothetical protein EUBHAL_02731 [Eubacterium hallii DSM 3353] Length = 164 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAREAELDLVKIAPNAKPPVCKIIDYGKYRYELARKEKEAKKKQKTIDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ FL G KVK++++FRGRE+ H + + +L E+ +++ +D +P Sbjct: 90 DKNDLNTKINQARKFLSKGDKVKVTLRFRGRELAHVNSSKVILEEFAEQLSDVAVVDKQP 149 Query: 121 KFEGRQMIMILSSK 134 KFEGR MIM L+ K Sbjct: 150 KFEGRSMIMFLTEK 163 >gi|153855816|ref|ZP_01996802.1| hypothetical protein DORLON_02823 [Dorea longicatena DSM 13814] gi|149751857|gb|EDM61788.1| hypothetical protein DORLON_02823 [Dorea longicatena DSM 13814] Length = 164 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEADLDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + + G+I+ I+ Sbjct: 90 ETNDLNTKVNNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAQMLGDIAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|312793383|ref|YP_004026306.1| translation initiation factor if-3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180523|gb|ADQ40693.1| translation initiation factor IF-3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 166 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|307611590|emb|CBX01272.1| translation initiation factor IF-3 [Legionella pneumophila 130b] Length = 126 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 80/125 (64%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EARKKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLLMVL 120 Query: 132 SSKCV 136 S K Sbjct: 121 SPKKT 125 >gi|15604388|ref|NP_220904.1| translation initiation factor IF-3 [Rickettsia prowazekii str. Madrid E] gi|6225540|sp|Q9ZD19|IF3_RICPR RecName: Full=Translation initiation factor IF-3 gi|3861080|emb|CAA14980.1| TRANSLATION INITIATION FACTOR IF-3 (infC) [Rickettsia prowazekii] Length = 185 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|320536886|ref|ZP_08036879.1| translation initiation factor IF-3 [Treponema phagedenis F0421] gi|320146269|gb|EFW37892.1| translation initiation factor IF-3 [Treponema phagedenis F0421] Length = 174 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ NLDLVE+ P VCKILD K R+ ++K +++KKQK +KE++M+P I Sbjct: 37 LRMAKDINLDLVEVAPQANPPVCKILDYGKYRFEMEKKLRDSKKKQKLQTLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ K K I FL G KVK++++FRGRE+ H +LG ++L N+ +R ++ +P Sbjct: 97 NDHDMNFKAKHIQKFLDGGDKVKVTIRFRGRELAHTNLGYDVLQNVLQRLSGDFSVEKQP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M L+ K Sbjct: 157 AMEGRTMSMTLAPKS 171 >gi|183598815|ref|ZP_02960308.1| hypothetical protein PROSTU_02248 [Providencia stuartii ATCC 25827] gi|188021024|gb|EDU59064.1| hypothetical protein PROSTU_02248 [Providencia stuartii ATCC 25827] Length = 143 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LAKAEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGMEVLNRIKADLDELASVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 127 SRIEGRQMIMVLAPKK 142 >gi|312135020|ref|YP_004002358.1| translation initiation factor if-3 [Caldicellulosiruptor owensensis OL] gi|311775071|gb|ADQ04558.1| translation initiation factor IF-3 [Caldicellulosiruptor owensensis OL] Length = 166 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGVVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 + +G+ + +++ K Sbjct: 151 RLDGKNLTAVIAPK 164 >gi|224476771|ref|YP_002634377.1| translation initiation factor IF-3 [Staphylococcus carnosus subsp. carnosus TM300] gi|254803492|sp|B9DNC6|IF3_STACT RecName: Full=Translation initiation factor IF-3 gi|222421378|emb|CAL28192.1| translation initiation factor IF-3 [Staphylococcus carnosus subsp. carnosus TM300] Length = 175 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVGLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ P Sbjct: 99 EEHDFQTKLKNGRKFLNKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQRP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|194476916|ref|YP_002049095.1| translation initiation factor IF-3 [Paulinella chromatophora] gi|171191923|gb|ACB42885.1| translation initiation factor IF-3 [Paulinella chromatophora] Length = 216 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEIAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L +LL + + E S P Sbjct: 107 DSHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTSLAEQLLMRLAKDLEEQSETQQLP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM+LS + Sbjct: 167 KREGRNMIMLLSPRKT 182 >gi|307102855|gb|EFN51121.1| hypothetical protein CHLNCDRAFT_141304 [Chlorella variabilis] Length = 380 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 5/138 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRP 58 + A+ +DL+ I P V +I++ K Y ++K A EA++KQ+ KEVK+RP Sbjct: 240 LAEARSLGMDLIMIVPDAAPPVVRIMEFSKYNYELEKAAKEAKRKQREAVVETKEVKLRP 299 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG--EISRI 116 D+HD QVK+KA FL G +VK++++FRGRE+ Q +GRE+ E G ++S I Sbjct: 300 ATDVHDYQVKVKAAQKFLGKGHRVKLTLQFRGREMEFQQIGREMFQRFVEDCGGSDVS-I 358 Query: 117 DCEPKFEGRQMIMILSSK 134 + P+ +GRQM M+LS K Sbjct: 359 EQPPQMQGRQMTMLLSRK 376 >gi|218245669|ref|YP_002371040.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801] gi|257058715|ref|YP_003136603.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802] gi|226707355|sp|B7JYL4|IF3_CYAP8 RecName: Full=Translation initiation factor IF-3 gi|218166147|gb|ACK64884.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801] gi|256588881|gb|ACU99767.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802] Length = 176 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LSLAQEKELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D V++ FL+ G KVK +V FRGREI H +L +ELL + + E++ I P Sbjct: 102 GESDYNVRVNQAKRFLKSGDKVKATVTFRGREIQHANLAQELLERMAKDLEELAEIQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M L+ K Sbjct: 162 KREGRNMMMFLTPKK 176 >gi|302035783|ref|YP_003796105.1| translation initiation factor IF-3 [Candidatus Nitrospira defluvii] gi|300603847|emb|CBK40179.1| Translation initiation factor IF-3 [Candidatus Nitrospira defluvii] Length = 168 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 89/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 AQE DLVE+ + P VC+I+D K ++ + K ++R+ QKST +KE+K+RP D Sbjct: 36 NKAQEGGYDLVEVAPTSQPPVCRIMDYGKYKFELSKKDHQSRRHQKSTQVKEIKLRPRTD 95 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL++K++ I FL DG K K+++ +RGRE+ +Q++GR +++++ + E ++ P+ Sbjct: 96 KHDLEIKIRQIKEFLADGNKTKVTLTYRGREMANQEMGRTMMASVIKECTEAGTVEFAPR 155 Query: 122 FEGRQMIMILSSK 134 EGR +IMIL+ K Sbjct: 156 MEGRSLIMILAPK 168 >gi|304570590|ref|YP_389129.2| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 194 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 58/130 (44%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ + P VC+++D K +Y QK EA+K+Q +KE+K+RP D H Sbjct: 60 AKEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEH 119 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q KLK I FL DG + K++V FRGREI+H+D G LL +E +I++++ EP+ E Sbjct: 120 DYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRAE 179 Query: 124 GRQMIMILSS 133 GR + M+L+ Sbjct: 180 GRTLHMLLTP 189 >gi|295109210|emb|CBL23163.1| bacterial translation initiation factor 3 (bIF-3) [Ruminococcus obeum A2-162] Length = 164 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 59/131 (45%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELSRKEKEAKKKQKTIDIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ A FL G +VK++++FRGRE+ H + +L + E +I+ ++ PK E Sbjct: 93 DLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMSSSKHVLDDFAELLTDIAVVEKAPKIE 152 Query: 124 GRQMIMILSSK 134 GR M M LS K Sbjct: 153 GRSMTMFLSEK 163 >gi|319760485|ref|YP_004124423.1| translation initiation factor IF-3 [Candidatus Blochmannia vafer str. BVAF] gi|318039199|gb|ADV33749.1| translation initiation factor IF-3 [Candidatus Blochmannia vafer str. BVAF] Length = 193 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 60/137 (43%), Positives = 85/137 (62%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI + P VCKI+D K Y K+ E +KKQK +KE+K RP Sbjct: 37 IKQAESVGLDLVEISPNSDPPVCKIMDYGKFLYEKSKSTKEQKKKQKIIHVKEIKFRPST 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q KL+ I FL +GCK+KI+++FRG E++H +G ++L I+ E++ I+ P Sbjct: 97 DEGDYQTKLRNIIKFLSEGCKIKITLRFRGGELIHHQIGMKVLYRIRNELHELATIEFFP 156 Query: 121 -KFEGRQMIMILSSKCV 136 K EGRQM MIL K + Sbjct: 157 KKIEGRQMTMILIPKKI 173 >gi|86158398|ref|YP_465183.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-C] gi|123723044|sp|Q2IJB8|IF3_ANADE RecName: Full=Translation initiation factor IF-3 gi|85774909|gb|ABC81746.1| bacterial translation initiation factor 3 (bIF-3) [Anaeromyxobacter dehalogenans 2CP-C] Length = 233 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP Sbjct: 47 LARAQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P Sbjct: 107 EEHDYDTKIKKVREFLAEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAP 166 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 167 RMEGRQMFMILAP 179 >gi|255526048|ref|ZP_05392971.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296187095|ref|ZP_06855493.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|255510234|gb|EET86551.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] gi|296048289|gb|EFG87725.1| translation initiation factor IF-3 [Clostridium carboxidivorans P7] Length = 200 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I + P VCKI+D K Y K +A+KKQK +KEV++ P I Sbjct: 65 LKMAEEKELDLVMISPNANPPVCKIMDFGKFVYEQAKKDKDAKKKQKVVTLKEVRLSPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K FL G KVK++V+FRGRE + GR++L R ++ I+ Sbjct: 125 EEHDVSIKANNGRKFLVAGDKVKVTVRFRGREADYSFTGRKILDAFYSRLEDVCIIEKHA 184 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIMIL+ K Sbjct: 185 KQEGRNMIMILAPKKA 200 >gi|313888399|ref|ZP_07822067.1| translation initiation factor IF-3 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845596|gb|EFR32989.1| translation initiation factor IF-3 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 222 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV + + P VC+I+D K RY +K EARKKQK +KE++ P I Sbjct: 81 IDLAISKKLDLVNVAPNAKPPVCRIMDYGKYRYEQEKKEKEARKKQKVINVKELRFSPNI 140 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K FL++G +VK+SV+FRGRE+ H DLGRE+L + E +D +P Sbjct: 141 EDHDLNTKANRAIDFLKNGDRVKVSVRFRGREMGHTDLGREVLDKFYDLISEYGVVDKKP 200 Query: 121 KFEGRQMIMILSSKC 135 K EGR ++M LS + Sbjct: 201 KMEGRSLVMFLSERK 215 >gi|302871994|ref|YP_003840630.1| translation initiation factor IF-3 [Caldicellulosiruptor obsidiansis OB47] gi|302574853|gb|ADL42644.1| translation initiation factor IF-3 [Caldicellulosiruptor obsidiansis OB47] Length = 166 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV+I P VCKI+D K ++ + K EA+K QK +KE+++ I Sbjct: 31 LRIAEEKKLDLVKIAPHANPPVCKIMDYGKYKFELAKKEKEAKKNQKVINVKEIRLTTTI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+K FL+DG KVK+S++FRGRE++H ++G E+++ E+ E ++ +P Sbjct: 91 EEHDFNVKVKNAIRFLQDGDKVKVSIRFRGREVLHPEIGEEIINKFIEKIKEYGIVEKKP 150 Query: 121 KFEGRQMIMILSSK 134 K +G+ + +++ K Sbjct: 151 KLDGKNLTAVIAPK 164 >gi|56707929|ref|YP_169825.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis SCHU S4] gi|89256699|ref|YP_514061.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica LVS] gi|110670400|ref|YP_666957.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC198] gi|115315106|ref|YP_763829.1| protein-synthesizing GTPase [Francisella tularensis subsp. holarctica OSU18] gi|167010451|ref|ZP_02275382.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FSC200] gi|194323752|ref|ZP_03057528.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida FTE] gi|208779843|ref|ZP_03247187.1| translation initiation factor IF-3 [Francisella novicida FTG] gi|224457009|ref|ZP_03665482.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] gi|254368006|ref|ZP_04984026.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica 257] gi|254370417|ref|ZP_04986422.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC033] gi|254373137|ref|ZP_04988626.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida GA99-3549] gi|290954130|ref|ZP_06558751.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica URFT1] gi|295312448|ref|ZP_06803220.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica URFT1] gi|56604421|emb|CAG45451.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis SCHU S4] gi|89144530|emb|CAJ79845.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica LVS] gi|110320733|emb|CAL08834.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC198] gi|115130005|gb|ABI83192.1| protein-synthesizing GTPase [Francisella tularensis subsp. holarctica OSU18] gi|134253816|gb|EBA52910.1| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica 257] gi|151568660|gb|EDN34314.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis FSC033] gi|151570864|gb|EDN36518.1| translation initiation factor IF-3 [Francisella novicida GA99-3549] gi|194322116|gb|EDX19598.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida FTE] gi|208744298|gb|EDZ90598.1| translation initiation factor IF-3 [Francisella novicida FTG] gi|282159112|gb|ADA78503.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis NE061598] gi|332184283|gb|AEE26537.1| Translation initiation factor 3 [Francisella cf. novicida 3523] gi|332678496|gb|AEE87625.1| Translation initiation factor 3 [Francisella cf. novicida Fx1] Length = 155 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 20 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 140 KLEGRQMIMVLGPKK 154 >gi|94986657|ref|YP_594590.1| translation initiation factor IF-3 [Lawsonia intracellularis PHE/MN1-00] gi|94730906|emb|CAJ54269.1| translation initiation factor 3 (IF-3) [Lawsonia intracellularis PHE/MN1-00] Length = 158 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVE+ ++ P VC+I+D K +Y QK EA+K+Q IKE+K+RP Sbjct: 20 IAIAKEHGLDLVEVAATADPPVCRIMDYGKFKYEAQKKKQEAKKRQTIVQIKEIKIRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ I FL +G +VK++V FRGREI+H+D G +L I E+ +++ EP Sbjct: 80 DEHDFETKVRHIKRFLEEGDRVKVTVFFRGREIVHKDRGIVILERIILETKEVGKVEQEP 139 Query: 121 KFEGRQMIMILSS 133 K EGR + M+L+ Sbjct: 140 KAEGRTLQMLLAP 152 >gi|33862392|ref|NP_893952.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9313] gi|39931215|sp|Q7TV76|IF3_PROMM RecName: Full=Translation initiation factor IF-3 gi|33640505|emb|CAE20294.1| Translatioin Initiation factor 3 [Prochlorococcus marinus str. MIT 9313] Length = 219 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|160915882|ref|ZP_02078090.1| hypothetical protein EUBDOL_01905 [Eubacterium dolichum DSM 3991] gi|158432358|gb|EDP10647.1| hypothetical protein EUBDOL_01905 [Eubacterium dolichum DSM 3991] Length = 192 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + +LDL+ + TP VCK+L+ K R+ QK A EA++ Q+ T +K +++ PVI Sbjct: 57 LEIAYDQDLDLLCVAPKATPPVCKVLNYGKHRFEQQKKAKEAKRNQQVTEVKPIRLSPVI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ ++ +P Sbjct: 117 DKHDFDTKMRHARKWVEDGMKVKVDMRFRGRLITRLEVGKKIMNSFIEEISDIANVEKKP 176 Query: 121 KFEGRQMIMILSSKC 135 EG M +L+ K Sbjct: 177 ILEGNTMSCVLAPKK 191 >gi|148268161|ref|YP_001247104.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH9] gi|150394228|ref|YP_001316903.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH1] gi|147741230|gb|ABQ49528.1| bacterial translation initiation factor 3 (bIF-3) [Staphylococcus aureus subsp. aureus JH9] gi|149946680|gb|ABR52616.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JH1] Length = 200 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 64 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 124 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 183 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 184 KMDGRQMFIMLAP 196 >gi|282882545|ref|ZP_06291166.1| translation initiation factor IF-3 [Peptoniphilus lacrimalis 315-B] gi|300813873|ref|ZP_07094178.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297687|gb|EFA90162.1| translation initiation factor IF-3 [Peptoniphilus lacrimalis 315-B] gi|300512060|gb|EFK39255.1| translation initiation factor IF-3 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 181 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ + LDLV + + P VCKI+D K RY + K EA+KKQK IKE+++ P I Sbjct: 46 LDMAEASKLDLVNVAPNAKPPVCKIMDYGKYRYELIKKEKEAKKKQKVINIKELRLTPNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K FL+ G +VK++V+FRGRE+ H D+GRE+L E E +D +P Sbjct: 106 ETHDLNTKANRAIDFLKSGDRVKVAVRFRGREMGHTDIGREVLDKFVELVSEYGVVDKKP 165 Query: 121 KFEGRQMIMILSSK 134 K EG+ MIM LS+K Sbjct: 166 KMEGKNMIMFLSAK 179 >gi|78183715|ref|YP_376149.1| translation initiation factor IF-3 [Synechococcus sp. CC9902] gi|123743576|sp|Q3B0M2|IF3_SYNS9 RecName: Full=Translation initiation factor IF-3 gi|78168009|gb|ABB25106.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus sp. CC9902] Length = 217 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++++E LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVSKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H L LL + + E + I P Sbjct: 107 DSHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAEVLLRRMAKDLEEKAEIQQSP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|149371735|ref|ZP_01891151.1| translation initiation factor IF-3 [unidentified eubacterium SCB49] gi|149355362|gb|EDM43922.1| translation initiation factor IF-3 [unidentified eubacterium SCB49] Length = 147 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 78/134 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 13 EMAEEQELDLVEISPNANPPVCKIMDYKKFVYEQKKREKVMKSKATKVIIKEIRFGPNTD 72 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K FL+DG K+K V F+GR I+++D G LL + + ++ +++ PK Sbjct: 73 DHDYEFKKKHAIKFLKDGAKLKAYVFFKGRSIIYKDQGEILLLKLAQELEDLGKVEQMPK 132 Query: 122 FEGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 133 LEGKRMIMFIAPKK 146 >gi|114776995|ref|ZP_01452015.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1] gi|114552516|gb|EAU54976.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1] Length = 178 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 77/130 (59%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ LDLV + + P VC+I+D K +Y K A A+K+Q IKEVK+R D H Sbjct: 46 AEAKGLDLVLMAAKSNPPVCRIMDYGKYKYEQSKKANAAKKRQHVMQIKEVKVRASTDQH 105 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL VK++ FL +G KVK+S++FRGRE+ H G + ++ E E + + P E Sbjct: 106 DLDVKMRHAKQFLSEGNKVKVSLRFRGREMAHTGQGLAQMKHVAELVAEFGKPEKMPNME 165 Query: 124 GRQMIMILSS 133 GRQMIMIL+ Sbjct: 166 GRQMIMILAP 175 >gi|319954102|ref|YP_004165369.1| bacterial translation initiation factor 3 (bif-3) [Cellulophaga algicola DSM 14237] gi|319422762|gb|ADV49871.1| bacterial translation initiation factor 3 (bIF-3) [Cellulophaga algicola DSM 14237] Length = 154 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI + P VCKI D +K Y +K + K +KE++ P Sbjct: 17 LNKAEELELDLVEISPNADPPVCKITDYKKFLYEQKKREKVMKAKATKVIVKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL+DG K+K V F+GR I+++D G LL + ++ +++ P Sbjct: 77 DDHDYEFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLKLASELEDLGKVEQMP 136 Query: 121 KFEGRQMIMILSSKC 135 + EG++M M ++ K Sbjct: 137 RLEGKRMTMFIAPKT 151 >gi|319790150|ref|YP_004151783.1| translation initiation factor IF-3 [Thermovibrio ammonificans HB-1] gi|317114652|gb|ADU97142.1| translation initiation factor IF-3 [Thermovibrio ammonificans HB-1] Length = 142 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 88/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVE+ + P VC+I+D K +Y +QK EA+KKQK+ +K VK+RP Sbjct: 7 LELARDKGLDLVEVSPNANPPVCRIMDFGKYKYQMQKKMHEAKKKQKTVEVKTVKVRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD+QV++K + F+ G KVK V FRGRE H ++G L I E +I+ ++ +P Sbjct: 67 DEHDMQVRIKQVRRFIEKGDKVKAVVMFRGREQAHLEIGEAQLMKIYEAVKDIAEMERKP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIMIL+ K Sbjct: 127 KKEGRDMIMILAPKK 141 >gi|218886085|ref|YP_002435406.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226707356|sp|B8DPN1|IF3_DESVM RecName: Full=Translation initiation factor IF-3 gi|218757039|gb|ACL07938.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 176 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 53/130 (40%), Positives = 84/130 (64%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ ++ P VC+++D + +Y QK EA+K Q IKE+K+RP D H Sbjct: 43 AKELGLDLVEVAATADPPVCRVMDYGRFKYEQQKKKAEAKKNQTVIQIKEIKVRPKTDDH 102 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D K++ I F+ +G + K++V FRGREI+H+D G+ +L I E +I+++D E + E Sbjct: 103 DYDTKVRHIRRFIEEGDRCKVTVFFRGREIVHKDRGQSILDRIVEDTKDIAKMDQEARAE 162 Query: 124 GRQMIMILSS 133 GR + M+L+ Sbjct: 163 GRTLFMMLAP 172 >gi|220903767|ref|YP_002479079.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868066|gb|ACL48401.1| translation initiation factor IF-3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 176 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 88/133 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVE+ S+ P VC+I+D K +Y QK EA+K+Q IKE+K+RP D Sbjct: 44 MAKEAGMDLVEVSSNSEPPVCRIMDYGKFKYEQQKKKQEAKKRQAVVQIKEIKVRPKTDD 103 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K++ I FL +G + KI+V FRGREI+H+D G +L + + +I+R+D EP+ Sbjct: 104 HDYETKVRHIRRFLEEGDRCKITVFFRGREIVHKDRGIAILERVVQDLADIARVDQEPRA 163 Query: 123 EGRQMIMILSSKC 135 EGR + M+L K Sbjct: 164 EGRTLQMMLVPKK 176 >gi|331090829|ref|ZP_08339675.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399688|gb|EGG79350.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 2_1_46FAA] Length = 164 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA+LDLV+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEADLDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKTVDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + E +++ ++ +P Sbjct: 90 ESNDLNTKVNNAKKFIEKGNKVKVTLRFRGREMAHVQTSKHILDDFAEMLKDVASVEKQP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|154490251|ref|ZP_02030512.1| hypothetical protein PARMER_00483 [Parabacteroides merdae ATCC 43184] gi|154089143|gb|EDN88187.1| hypothetical protein PARMER_00483 [Parabacteroides merdae ATCC 43184] Length = 204 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 75/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI + P VC+I D +K Y +K E + K +KE++ P Sbjct: 39 LKMAEDQGLDLVEISPNAAPPVCRITDYQKFLYQQKKRQKEQKAKSVKVIVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPKKA 174 >gi|225568223|ref|ZP_03777248.1| hypothetical protein CLOHYLEM_04297 [Clostridium hylemonae DSM 15053] gi|225162942|gb|EEG75561.1| hypothetical protein CLOHYLEM_04297 [Clostridium hylemonae DSM 15053] Length = 164 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA LDLV+I P VCKI+D K +Y + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEAELDLVKIAPKAQPPVCKIIDYGKYKYELARKEKEAKKKQKTVELKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H R +L + E+ +++ I+ Sbjct: 90 DTNDLNTKINNAKKFIGKGNKVKVTLRFRGREMAHVHQSRHILDDFAEQLADVATIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRSMSMVLTEK 163 >gi|33241247|ref|NP_876189.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931228|sp|Q7V9N2|IF3_PROMA RecName: Full=Translation initiation factor IF-3 gi|33238777|gb|AAQ00842.1| Translation initiation factor 3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 201 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ LDLV + P VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H +L LL+ + + E + + P Sbjct: 107 DEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLAESLLARMAKDLEEPAEVQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|153809789|ref|ZP_01962457.1| hypothetical protein RUMOBE_00170 [Ruminococcus obeum ATCC 29174] gi|149833967|gb|EDM89047.1| hypothetical protein RUMOBE_00170 [Ruminococcus obeum ATCC 29174] Length = 164 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID + Sbjct: 33 AQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELSRKEKEAKKKQKTIDIKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL+ K+ A FL G +VK++++FRGRE+ H + +L + E +++ ++ PK E Sbjct: 93 DLKTKVNAARKFLSKGDRVKVTLRFRGREMAHMASSKHVLDDFAELLADVAVVEKAPKIE 152 Query: 124 GRQMIMILSSK 134 GR M M LS K Sbjct: 153 GRSMTMFLSEK 163 >gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] gi|219871991|ref|YP_002476366.1| translation initiation factor IF-3 [Haemophilus parasuis SH0165] gi|167852279|gb|EDS23591.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] gi|219692195|gb|ACL33418.1| translation initiation factor IF-3 [Haemophilus parasuis SH0165] Length = 159 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 23 LAKADEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+V+FRGRE+ HQ++G ++L +K EI+ ++ P Sbjct: 83 DEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQEIGMDVLERVKNDLAEIAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ++M+L+ K Sbjct: 143 GKLEGRQVVMVLAPKK 158 >gi|220917091|ref|YP_002492395.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-1] gi|254803480|sp|B8J830|IF3_ANAD2 RecName: Full=Translation initiation factor IF-3 gi|219954945|gb|ACL65329.1| translation initiation factor IF-3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 230 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP Sbjct: 47 LARAQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P Sbjct: 107 EEHDYDTKIKKVRAFLGEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAP 166 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 167 RMEGRQMFMILAP 179 >gi|165975679|ref|YP_001651272.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149494|ref|YP_001968019.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251655|ref|ZP_07337828.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307245035|ref|ZP_07527130.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251753|ref|ZP_07533656.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253989|ref|ZP_07535838.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256249|ref|ZP_07538034.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258444|ref|ZP_07540183.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260681|ref|ZP_07542371.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262813|ref|ZP_07544438.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165875780|gb|ABY68828.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914625|gb|ACE60877.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649497|gb|EFL79680.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854059|gb|EFM86269.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860754|gb|EFM92764.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863052|gb|EFM94997.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865248|gb|EFM97146.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867486|gb|EFM99335.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869602|gb|EFN01389.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871828|gb|EFN03547.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 159 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 23 LARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL++I FL DG KVKI+V+FRGRE+ HQD+G ++L +K E++ ++ P Sbjct: 83 DEGDYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 143 GKLEGRQAVMVIAPKK 158 >gi|197122309|ref|YP_002134260.1| translation initiation factor IF-3 [Anaeromyxobacter sp. K] gi|238689844|sp|B4UAN5|IF3_ANASK RecName: Full=Translation initiation factor IF-3 gi|196172158|gb|ACG73131.1| translation initiation factor IF-3 [Anaeromyxobacter sp. K] Length = 232 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQE +DLVE+ P VCKI+D + +Y +K EA+KKQ +KEVK+RP Sbjct: 47 LARAQELGMDLVEVSPMAKPPVCKIMDYGRFKYLEKKKQNEAKKKQVVVQLKEVKLRPRT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+K + FL + K +I+V FRGRE+ H++LG+++L + E +++ I+ P Sbjct: 107 EEHDYDTKIKKVRAFLGEANKARITVMFRGREMSHRELGQKVLQRVIEDLRDVAVIESAP 166 Query: 121 KFEGRQMIMILSS 133 + EGRQM MIL+ Sbjct: 167 RMEGRQMFMILAP 179 >gi|157827551|ref|YP_001496615.1| translation initiation factor IF-3 [Rickettsia bellii OSU 85-389] gi|157802855|gb|ABV79578.1| translation initiation factor IF-3 [Rickettsia bellii OSU 85-389] Length = 147 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNAEPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+D+G EL I+ +++ID + Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKDVGEELFKRIEVGLEGLAKIDQQA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|228475216|ref|ZP_04059942.1| translation initiation factor IF-3 [Staphylococcus hominis SK119] gi|228270827|gb|EEK12229.1| translation initiation factor IF-3 [Staphylococcus hominis SK119] Length = 175 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|268592567|ref|ZP_06126788.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] gi|291311981|gb|EFE52434.1| translation initiation factor IF-3 [Providencia rettgeri DSM 1131] Length = 143 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LFKAEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGLEVLNRIKTDLDELASVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 127 SRIEGRQMIMVLAPKK 142 >gi|303252806|ref|ZP_07338966.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247208|ref|ZP_07529258.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648367|gb|EFL78563.1| translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856266|gb|EFM88419.1| Translation initiation factor IF-3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 159 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 23 LARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 82 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL++I FL DG +VKI+V+FRGRE+ HQD+G ++L +K E++ ++ P Sbjct: 83 DEGDYQIKLRSILRFLEDGDRVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAP 142 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 143 GKLEGRQAVMVIAPKK 158 >gi|172037491|ref|YP_001803992.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] gi|171698945|gb|ACB51926.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] Length = 179 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE +LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LNVAQERDLDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L +ELLS + E++ I P Sbjct: 102 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQELLSRMAADLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPKK 176 >gi|78220085|gb|ABB39434.1| bacterial translation initiation factor 3 (bIF-3) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 169 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 58/130 (44%), Positives = 85/130 (65%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+E LDLVE+ + P VC+++D K +Y QK EA+K+Q +KE+K+RP D H Sbjct: 35 AKEQGLDLVEVAAGAVPPVCRVMDYGKYKYEAQKKKQEAKKRQTVIQVKEIKVRPKTDEH 94 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D Q KLK I FL DG + K++V FRGREI+H+D G LL +E +I++++ EP+ E Sbjct: 95 DYQTKLKHIRRFLEDGDRCKVTVFFRGREIVHKDRGMMLLQRAQEDTKDIAKVEQEPRAE 154 Query: 124 GRQMIMILSS 133 GR + M+L+ Sbjct: 155 GRTLHMLLTP 164 >gi|18310876|ref|NP_562810.1| translation initiation factor IF-3 [Clostridium perfringens str. 13] gi|18145558|dbj|BAB81600.1| translation initiation factor IF-3 [Clostridium perfringens str. 13] Length = 134 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 81/134 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA EA LDLV I + P VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 1 MADEAELDLVMISPNAKPPVCKIMDYGKFIYEQSKKEKEAKKKQKVISVKEIRVSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HDL++K K FL G KVKI+V+FRGRE H +G ++L + + E+ ++ K Sbjct: 61 HDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAKL 120 Query: 123 EGRQMIMILSSKCV 136 EGR MIMIL+ K Sbjct: 121 EGRNMIMILAPKKA 134 >gi|223984491|ref|ZP_03634624.1| hypothetical protein HOLDEFILI_01918 [Holdemania filiformis DSM 12042] gi|223963562|gb|EEF67941.1| hypothetical protein HOLDEFILI_01918 [Holdemania filiformis DSM 12042] Length = 180 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + LDL+ + + P VCKI+D + R+ QK A EA++ Q T +K +++ PVI Sbjct: 45 LEKAYDYELDLLCVAPNGNPPVCKIVDYGRYRFESQKKAKEAKRNQHVTEVKPMRLSPVI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL+ ++ DG KVKI ++FRGR I ++G++++++ E+ +I+ ++ P Sbjct: 105 DTHDFDTKLRQARNWVEDGMKVKIDMRFRGRLITRLEVGKKVMNSFVEQMSDIASVEKAP 164 Query: 121 KFEGRQMIMILSSKC 135 EG M ++L+ K Sbjct: 165 ALEGNTMSVVLTPKK 179 >gi|223044119|ref|ZP_03614158.1| translation initiation factor IF-3 [Staphylococcus capitis SK14] gi|314933835|ref|ZP_07841200.1| translation initiation factor IF-3 [Staphylococcus caprae C87] gi|222442513|gb|EEE48619.1| translation initiation factor IF-3 [Staphylococcus capitis SK14] gi|313653985|gb|EFS17742.1| translation initiation factor IF-3 [Staphylococcus caprae C87] Length = 175 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKELRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEQFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|152979114|ref|YP_001344743.1| translation initiation factor IF-3 [Actinobacillus succinogenes 130Z] gi|150840837|gb|ABR74808.1| translation initiation factor IF-3 [Actinobacillus succinogenes 130Z] Length = 182 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 46 LSRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ I FL DG KVKI+V+FRGRE+ HQD+G ++L +K+ E++ ++ P Sbjct: 106 DEGDYQVKLRNILRFLEDGDKVKITVRFRGREMAHQDIGLDVLERVKQDTAEVAMVESAP 165 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 166 GKLEGRQAVMVIAPKK 181 >gi|218259670|ref|ZP_03475319.1| hypothetical protein PRABACTJOHN_00978 [Parabacteroides johnsonii DSM 18315] gi|218224963|gb|EEC97613.1| hypothetical protein PRABACTJOHN_00978 [Parabacteroides johnsonii DSM 18315] Length = 204 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 75/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDLVEI + P VC+I D +K Y +K E + K +KE++ P Sbjct: 39 LKMAEDQGLDLVEISPNAAPPVCRITDYQKFLYQQKKRQKEQKAKSVKVIVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL E +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFANDLEEYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPKKA 174 >gi|42523122|ref|NP_968502.1| translation initiation factor IF-3 [Bdellovibrio bacteriovorus HD100] gi|39575327|emb|CAE79495.1| translation initiation factor IF-3 [Bdellovibrio bacteriovorus HD100] Length = 178 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDL+EI + TP CKI+D K +Y +K A ARKKQ IKE++MRP Sbjct: 11 LRIAEDRGLDLLEIAPTATPPTCKIMDYGKWKYENKKKATAARKKQTVVTIKEIQMRPRT 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ FL +G KVK+S++F GRE+ HQ+LG +++ +++ ++ +P Sbjct: 71 DQHDFETKMNHARRFLLEGDKVKVSLRFMGREMAHQELGMDVMKKCIAFVDDLALVESQP 130 Query: 121 KFEGRQMIMILSS 133 K EG+ M ++L Sbjct: 131 KMEGKNMFLMLGP 143 >gi|305664644|ref|YP_003860931.1| translation initiation factor IF-3 [Maribacter sp. HTCC2170] gi|88707345|gb|EAQ99591.1| translation initiation factor IF-3 [Maribacter sp. HTCC2170] Length = 152 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E LDLVEI P VCKI+D +K Y +K + K +KE++ P Sbjct: 16 MAKAEEIGLDLVEISPKADPPVCKIIDYKKFLYEQKKREKIMKAKASKVVVKEIRFGPNT 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K K + FL+DG K+K V F+GR I+++D G LL + E+ +++ P Sbjct: 76 DDHDYQFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLKLASELEELGKVEQMP 135 Query: 121 KFEGRQMIMILSSKC 135 K EG++M M ++ K Sbjct: 136 KLEGKRMTMFIAPKT 150 >gi|225375382|ref|ZP_03752603.1| hypothetical protein ROSEINA2194_01007 [Roseburia inulinivorans DSM 16841] gi|225212871|gb|EEG95225.1| hypothetical protein ROSEINA2194_01007 [Roseburia inulinivorans DSM 16841] Length = 181 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KE+++ P I Sbjct: 47 MKLAEEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVVELKEIRLSPNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+DL K+ A FL G KVKI+++FRGRE+ H + + +L + E + + ++ P Sbjct: 107 DLNDLNTKMNAAKKFLSKGDKVKITLRFRGREMAHMNASKHILDDFAESLSDTAVVEKAP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+L+ K Sbjct: 167 KVEGRSISMVLAEKK 181 >gi|149196438|ref|ZP_01873493.1| initiation factor IF-3 [Lentisphaera araneosa HTCC2155] gi|149140699|gb|EDM29097.1| initiation factor IF-3 [Lentisphaera araneosa HTCC2155] Length = 174 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 1/131 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ-KSTGIKEVKMRPVIDL 62 A LDLVE+ P V +I+D K Y +K +ARKKQ + +KE+K I Sbjct: 39 ADSEGLDLVELAPDAKPPVVRIMDYGKFIYEKKKQQKDARKKQMNNNQVKELKFHVNIHD 98 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD Q KLK F+ G K+KI+++FR RE+ H +LG L+ I E GE I+ +PK Sbjct: 99 HDFQTKLKHASEFVAKGYKLKITLQFRAREMAHPELGDALMERIIETLGETVTIEAKPKL 158 Query: 123 EGRQMIMILSS 133 GR M M LS Sbjct: 159 MGRNMSMQLSP 169 >gi|153814480|ref|ZP_01967148.1| hypothetical protein RUMTOR_00693 [Ruminococcus torques ATCC 27756] gi|317500522|ref|ZP_07958745.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089378|ref|ZP_08338277.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847974|gb|EDK24892.1| hypothetical protein RUMTOR_00693 [Ruminococcus torques ATCC 27756] gi|316898111|gb|EFV20159.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 8_1_57FAA] gi|330404746|gb|EGG84284.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 3_1_46FAA] Length = 164 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I + P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 MKIAQEAELDLVKIAPAAKPPVCKIIDYGKYKYEQARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E +++ ++ Sbjct: 90 DTNDLNTKINNAKKFISKGNKVKVTLRFRGREMAHVQQSKHILDDFAETLADVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KMEGRAMSMVLAEK 163 >gi|261344016|ref|ZP_05971661.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] gi|282568409|gb|EFB73944.1| translation initiation factor IF-3 [Providencia rustigianii DSM 4541] Length = 144 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LFKAEEAGVDLVEISPNAEPPVCRIMDYGKHLYEKSKSQKEQKKKQKIVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K K++++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKVTLRFRGREMAHQQIGMEILNRIKADLEELAVVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIMI++ K Sbjct: 127 SRIEGRQMIMIMAPKK 142 >gi|160878605|ref|YP_001557573.1| translation initiation factor IF-3 [Clostridium phytofermentans ISDg] gi|160427271|gb|ABX40834.1| translation initiation factor IF-3 [Clostridium phytofermentans ISDg] Length = 164 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQ+ANLDLV+I + P VCKI+D K RY + + EA+KKQK T +KE+++ P I Sbjct: 30 LKMAQDANLDLVKIAPTAKPPVCKIVDYGKYRYELARKEKEAKKKQKVTDVKEIRLTPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K F+ G KVK+S++FRGRE+ H + +++L + E+ +++ ++ Sbjct: 90 DDNDLNTKANQARKFITKGDKVKVSLRFRGREMAHINSSKQILDSFFEKLQDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M L+ K Sbjct: 150 KMEGRSIFMFLTEK 163 >gi|269102905|ref|ZP_06155602.1| translation initiation factor 3 [Photobacterium damselae subsp. damselae CIP 102761] gi|268162803|gb|EEZ41299.1| translation initiation factor 3 [Photobacterium damselae subsp. damselae CIP 102761] Length = 137 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A EA +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP Sbjct: 1 MNAAHEAGVDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKKQKQIQIKEVKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE+ HQ +G ELL+ IK+ +++ ++ P Sbjct: 61 DEGDYQVKLRNLSRFLEEGNKGKVTLRFRGREMAHQSIGIELLNRIKDDLIDLAVVESFP 120 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQM M+L+ K Sbjct: 121 SRVEGRQMTMMLAPKK 136 >gi|72383053|ref|YP_292408.1| translation initiation factor IF-3 [Prochlorococcus marinus str. NATL2A] gi|123759845|sp|Q46IH3|IF3_PROMT RecName: Full=Translation initiation factor IF-3 gi|72002903|gb|AAZ58705.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus marinus str. NATL2A] Length = 202 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + TP VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMAKDLEEKAEVQQSP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|255531805|ref|YP_003092177.1| translation initiation factor IF-3 [Pedobacter heparinus DSM 2366] gi|255344789|gb|ACU04115.1| translation initiation factor IF-3 [Pedobacter heparinus DSM 2366] Length = 189 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 52 LALADELELDLVEISPNAVPPVCRIIDYSKFVYEQKKKQKEIKANAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL +G KV+ V F+GR I++++ G LL + +I +++ P Sbjct: 112 NDHDFQFKLKHAISFLENGEKVRAYVHFKGRAIVYKEQGEILLLKFAQALEDIGKVELLP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 172 KLEGKRMFLTLAPKVA 187 >gi|148264671|ref|YP_001231377.1| translation initiation factor IF-3 [Geobacter uraniireducens Rf4] gi|146398171|gb|ABQ26804.1| bacterial translation initiation factor 3 (bIF-3) [Geobacter uraniireducens Rf4] Length = 138 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M +A+ LDLVE+ + P VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 1 MALAESQQLDLVEVSPTAVPPVCRIMDYGKFKYQQSKKQQEAKKKQVQVQLKEVKLRPKT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDLQ K+K + FL +G K K++V FRGREI H DLG+ L +I+ I+ + Sbjct: 61 DEHDLQFKIKHVRRFLEEGNKAKVTVVFRGREITHMDLGQSALDKFAAELQDIALIEVKQ 120 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MI++ K Sbjct: 121 KMEGRSMFMIVAPKT 135 >gi|255080936|ref|XP_002504034.1| initiation factor [Micromonas sp. RCC299] gi|226519301|gb|ACO65292.1| initiation factor [Micromonas sp. RCC299] Length = 255 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 3/134 (2%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRPVI 60 +A+EA LDLV + P VC+I++ K +Y +K A E RKK +KE+KMR I Sbjct: 37 IAEEAGLDLVLVSPDANPPVCRIMNYSKFKYENEKKARETRKKAAASRVEVKELKMRYNI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRIDCE 119 D+HD V+L+A FL G +VK+ +FRGRE +DLGR++ + G ++ +D Sbjct: 97 DVHDYGVRLRAAQKFLGAGDRVKVICQFRGRENEFRDLGRDMFMRFVDDVGADLCNLDGS 156 Query: 120 PKFEGRQMIMILSS 133 P EG +M+M+LS Sbjct: 157 PSMEGNRMVMLLSP 170 >gi|124026795|ref|YP_001015910.1| translation initiation factor IF-3 [Prochlorococcus marinus str. NATL1A] gi|166198963|sp|A2C586|IF3_PROM1 RecName: Full=Translation initiation factor IF-3 gi|123961863|gb|ABM76646.1| Translation Initiation factor 3 [Prochlorococcus marinus str. NATL1A] Length = 202 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + TP VC+I++ K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LEVAKERELDLVLVSEKATPPVCRIMNYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD QV++ FL+ G KVK +V FRGREI H L LL + + E + + P Sbjct: 107 DQHDYQVRISQATRFLKAGDKVKCTVIFRGREIQHTALAETLLKRMSKDLEEKAEVQQSP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|40062535|gb|AAR37480.1| translation initiation factor IF-3 [uncultured marine bacterium 106] Length = 130 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 74/125 (59%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVE+ P VC+++D K +Y K AR+ QK +KEVKM+P I+ HD Q K Sbjct: 1 MDLVEVSPKAKPPVCRLMDYGKFKYQQSKQNHVARQNQKVVHLKEVKMKPKIEKHDFQFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ FL DG KVK+ V+F GR+I H+DLG ELL + G+ ++ EGR M Sbjct: 61 LRNALRFLEDGDKVKVGVRFMGRQIAHKDLGVELLEKFQAEIGDDGTVEQPISSEGRSMH 120 Query: 129 MILSS 133 MIL+ Sbjct: 121 MILAP 125 >gi|152993996|ref|YP_001359717.1| translation initiation factor IF-3 [Sulfurovum sp. NBC37-1] gi|151425857|dbj|BAF73360.1| translation initiation factor IF-3 [Sulfurovum sp. NBC37-1] Length = 183 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 75/133 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P V K++D K +Y ++K EARK QK +KEVK I Sbjct: 48 LKIAEDKGLDLVLVSPDAKPPVAKVMDYGKHKYQLEKKKKEARKNQKKIEVKEVKFSCKI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK+ V RGRE+ + + G E+L+ + +I++++ Sbjct: 108 ADNDIAYKVKHAREFLEKGKHVKLRVFLRGREMANPEWGVEVLNRVWPMLEDIAQLESPA 167 Query: 121 KFEGRQMIMILSS 133 K EGR + M ++ Sbjct: 168 KQEGRYINMYVTP 180 >gi|323464240|gb|ADX76393.1| translation initiation factor IF-3 [Staphylococcus pseudintermedius ED99] Length = 175 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA LD+V + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMADRLGLDVVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL G KVK+S++FRGR I H+++G+ +L E +++ I+ +P Sbjct: 99 EEHDFNTKLKNGRKFLTKGDKVKVSIRFRGRAITHKEIGQRVLERYAEACQDLATIEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFLMLAP 171 >gi|149276294|ref|ZP_01882438.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] gi|149232814|gb|EDM38189.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] Length = 189 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + P VC+I+D K Y +K E + K T IKE++ P Sbjct: 52 LALADELELDLVEISPNAVPPVCRIIDYSKFVYEQKKKQKEIKANAKQTVIKEIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL +G KV+ V F+GR I++++ G LL + +I +++ P Sbjct: 112 NDHDFQFKLKHAVSFLENGEKVRAYVHFKGRAIVYKEQGEILLLKFAQALEDIGKVELLP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L+ K Sbjct: 172 KLEGKRMFLTLAPKVA 187 >gi|33152810|ref|NP_874163.1| translation initiation factor IF-3 [Haemophilus ducreyi 35000HP] gi|39931235|sp|Q7VKS0|IF3_HAEDU RecName: Full=Translation initiation factor IF-3 gi|33149034|gb|AAP96552.1| translation initiation factor IF-3 [Haemophilus ducreyi 35000HP] Length = 192 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A++A LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 56 LSRAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D Q+KL+ I FL DG KVKI+V++RGRE+ HQ++G ++L +K E++ ++ P Sbjct: 116 DEGDYQIKLRNILRFLEDGDKVKITVRYRGREMAHQEIGLDVLERVKTDTSEVAIVESAP 175 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 176 GKLEGRQAVMVIAPKK 191 >gi|157964578|ref|YP_001499402.1| translation initiation factor IF-3 [Rickettsia massiliae MTU5] gi|157844354|gb|ABV84855.1| Translation initiation factor IF-3 [Rickettsia massiliae MTU5] Length = 193 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 56 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KLK I FL+DG KVKIS+ F+GREI+H+++G+ L I+ + +ID Sbjct: 116 SIGDFETKLKKIKEFLKDGDKVKISLWFKGREILHKEVGQALFKRIEIGLAGLVKIDQHA 175 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 176 KMEGKQMIMIVSP 188 >gi|296122748|ref|YP_003630526.1| translation initiation factor IF-3 [Planctomyces limnophilus DSM 3776] gi|296015088|gb|ADG68327.1| translation initiation factor IF-3 [Planctomyces limnophilus DSM 3776] Length = 145 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E +DLVE+ P VC+I+D K +Y +K KQ IKE+++RP Sbjct: 11 MRVALEVGMDLVEVAPGERPPVCRIMDYGKFKYEQKKK-HANSAKQHQVQIKEIRLRPKT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KVK+++ FRGRE H D G+E+L+NI ++ E +++ P Sbjct: 70 GEHDIEFKVKQAKEFLSQKDKVKLNIIFRGRENAHHDRGKEILANIIQQLAEHCKVEQMP 129 Query: 121 KFE-GRQMIMILSSKC 135 K E GR MI +L+ K Sbjct: 130 KLEGGRNMIAVLAPKT 145 >gi|91215265|ref|ZP_01252237.1| translation initiation factor IF-3 [Psychroflexus torquis ATCC 700755] gi|91186870|gb|EAS73241.1| translation initiation factor IF-3 [Psychroflexus torquis ATCC 700755] Length = 148 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLVEI P VCK++D +K Y +K + K +KE++ P Sbjct: 12 LAMAEEQELDLVEISPKADPPVCKVMDYKKFLYEQKKREKVLKAKTTQVVVKEIRFGPNT 71 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL+DG K+K V F+GR I+ +D G+ LL + + ++++++ P Sbjct: 72 DDHDYEFKKKNAEKFLKDGAKLKAFVFFKGRSIVFKDKGQILLLRLAQDLEDLAKVEQMP 131 Query: 121 KFEGRQMIMILSS 133 K EG++MIMIL+ Sbjct: 132 KLEGKRMIMILAP 144 >gi|157828566|ref|YP_001494808.1| translation initiation factor IF-3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933280|ref|YP_001650069.1| translation initiation factor IF-3 [Rickettsia rickettsii str. Iowa] gi|157801047|gb|ABV76300.1| translation initiation factor IF-3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908367|gb|ABY72663.1| bacterial protein translation initiation factor 3 (IF-3) [Rickettsia rickettsii str. Iowa] Length = 157 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIIVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 140 KMEGKQMIMIVSP 152 >gi|15892688|ref|NP_360402.1| translation initiation factor IF-3 [Rickettsia conorii str. Malish 7] gi|34580403|ref|ZP_00141883.1| translation initiation factor IF-3 [Rickettsia sibirica 246] gi|229586780|ref|YP_002845281.1| translation initiation factor IF-3 [Rickettsia africae ESF-5] gi|15619861|gb|AAL03303.1| translation initiation factor IF-3 [Rickettsia conorii str. Malish 7] gi|28261788|gb|EAA25292.1| translation initiation factor IF-3 [Rickettsia sibirica 246] gi|228021830|gb|ACP53538.1| Translation initiation factor IF-3 [Rickettsia africae ESF-5] Length = 157 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 140 KMEGKQMIMIVSP 152 >gi|313891935|ref|ZP_07825536.1| translation initiation factor IF-3 [Dialister microaerophilus UPII 345-E] gi|329121027|ref|ZP_08249658.1| translation initiation factor IF3 [Dialister micraerophilus DSM 19965] gi|313119578|gb|EFR42769.1| translation initiation factor IF-3 [Dialister microaerophilus UPII 345-E] gi|327471189|gb|EGF16643.1| translation initiation factor IF3 [Dialister micraerophilus DSM 19965] Length = 174 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVE+ + P VC+I++ K RY QK E +KKQK +KEVK+RP I Sbjct: 40 LAEADDRGLDLVEVAPNGRPPVCRIMNYGKYRYEQQKREKEEKKKQKVFQVKEVKLRPNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VKLK+ FL DG KVK+++ FRGRE+ H +LG +L + + G+ + P Sbjct: 100 EDHDFYVKLKSAQRFLSDGNKVKVTIMFRGREMTHPELGSNVLERVIKELGDKIICEKSP 159 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+++ K Sbjct: 160 KLEGRNMTMVIAPKA 174 >gi|288940716|ref|YP_003442956.1| translation initiation factor IF-3 [Allochromatium vinosum DSM 180] gi|288896088|gb|ADC61924.1| translation initiation factor IF-3 [Allochromatium vinosum DSM 180] Length = 177 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 62/135 (45%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+++D + + +K EA+KKQK IKEVK RP Sbjct: 42 IAMAEEAGLDLVEIVPTSEPPVCRLMDFGRFLFDQKKKKNEAKKKQKQVQIKEVKFRPGT 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL +G K K++++FRGRE H++LG ELL I+ E S ++ +P Sbjct: 102 DEGDYQVKLRNLTRFLNEGDKAKVTMRFRGREHAHRELGLELLRRIESDLAEFSIVEQQP 161 Query: 121 KFEGRQMIMILSSKC 135 EGRQM+M+L K Sbjct: 162 LMEGRQMVMVLGPKK 176 >gi|167757066|ref|ZP_02429193.1| hypothetical protein CLORAM_02615 [Clostridium ramosum DSM 1402] gi|237735863|ref|ZP_04566344.1| translation initiation factor IF-3 [Mollicutes bacterium D7] gi|167703241|gb|EDS17820.1| hypothetical protein CLORAM_02615 [Clostridium ramosum DSM 1402] gi|229381608|gb|EEO31699.1| translation initiation factor IF-3 [Coprobacillus sp. D7] Length = 184 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A LDLV + + P VC+I+D K R+ QK A E ++ K +KE ++ I Sbjct: 49 IDIAYGAGLDLVCVAPNGKPPVCRIMDFGKYRFEQQKKAKEMKRNSKVVALKETQLSVTI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L +G KVKI+++FRGR++ H DLG++++ + E+ +I+ Sbjct: 109 DVHDKNVKLKRTLKWLEEGNKVKIAIRFRGRQLAHMDLGKKVIDDFVAECAEVGQIEKPA 168 Query: 121 KFEGRQMIMILSSKC 135 K EGR + I++ K Sbjct: 169 KLEGRTLTAIIAPKK 183 >gi|169349799|ref|ZP_02866737.1| hypothetical protein CLOSPI_00537 [Clostridium spiroforme DSM 1552] gi|169293367|gb|EDS75500.1| hypothetical protein CLOSPI_00537 [Clostridium spiroforme DSM 1552] Length = 184 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV + + P VC+I+D K R+ QK A E ++ K +KE ++ I Sbjct: 49 IDIAYNEGLDLVCVAPNAKPPVCRIMDFGKYRFEQQKKAKEMKRNSKVVAVKETQLSVTI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L +G KVK++++FRGR++ H DLG++++ + E+ +I+ Sbjct: 109 DVHDKNVKLKRTLKWLEEGNKVKVAIRFRGRQLAHMDLGKKVIDDFVAECAEVGQIEKPA 168 Query: 121 KFEGRQMIMILSSKC 135 K EGR + I++ K Sbjct: 169 KLEGRTLTAIIAPKK 183 >gi|212711438|ref|ZP_03319566.1| hypothetical protein PROVALCAL_02511 [Providencia alcalifaciens DSM 30120] gi|212685894|gb|EEB45422.1| hypothetical protein PROVALCAL_02511 [Providencia alcalifaciens DSM 30120] Length = 144 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP Sbjct: 7 LAKAEEAGVDLVEISPNAEPPVCRIMDYGKYLYEKSKSQKEQKKKQKVVQVKEIKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL DG K KI+++FRGRE+ HQ +G E+L+ IK E++ ++ P Sbjct: 67 DEGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIGMEMLNRIKADLEELAIVESFP 126 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM++S K Sbjct: 127 SRIEGRQMIMVMSPKK 142 >gi|94985609|ref|YP_604973.1| translation initiation factor IF-3 [Deinococcus geothermalis DSM 11300] gi|122986589|sp|Q1IY80|IF3_DEIGD RecName: Full=Translation initiation factor IF-3 gi|94555890|gb|ABF45804.1| translation initiation factor IF-3 [Deinococcus geothermalis DSM 11300] Length = 204 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 67/120 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E LDLV + P VC++LD + RY Q+N E RK+ ++ +K +K R I Sbjct: 38 LAMAREKGLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRARAQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL +G KVK+++ FRGRE H +LG +L + E +I + P Sbjct: 98 DDHDFNTKTGHVRRFLEEGHKVKVTIMFRGRERTHPELGERILHRVAETLADIGAPEGMP 157 >gi|158333810|ref|YP_001514982.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] gi|226707352|sp|B0CD77|IF3_ACAM1 RecName: Full=Translation initiation factor IF-3 gi|158304051|gb|ABW25668.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] Length = 177 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A E NLDLV + P VC+++D K ++ +K A EA+KKQ ++ +KEVKMR I Sbjct: 43 MEIADERNLDLVLVSDKADPPVCRVMDYGKFKFEQEKKAREAKKKQHTSDVKEVKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +V++ FL+ G KVK +V FRGREI H L LL + + + I P Sbjct: 103 QTHDYEVRVNHAKRFLKSGDKVKATVTFRGREIQHSHLAEALLKKMANDLLDFAEIQQAP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIM LS K Sbjct: 163 KREGRNMIMYLSPKK 177 >gi|315122256|ref|YP_004062745.1| translation initiation factor IF-3 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495658|gb|ADR52257.1| translation initiation factor IF-3 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 161 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 91/134 (67%), Positives = 108/134 (80%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEANLDLVEIDSS P +CK+LDLRKL+YT+QKNA EARKKQKS KEVK+ P I Sbjct: 28 LKKAQEANLDLVEIDSSANPPICKMLDLRKLKYTMQKNAAEARKKQKSVDTKEVKLSPGI 87 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D +VKL++IDGFLR GCKVK+ V+FRGRE+M+ D G LL+ IK EISR+D EP Sbjct: 88 KSNDYEVKLRSIDGFLRGGCKVKVYVRFRGREMMYPDQGYNLLTKIKNHVSEISRVDYEP 147 Query: 121 KFEGRQMIMILSSK 134 KFEGRQMIMILS K Sbjct: 148 KFEGRQMIMILSPK 161 >gi|239637522|ref|ZP_04678494.1| translation initiation factor IF-3 [Staphylococcus warneri L37603] gi|239596740|gb|EEQ79265.1| translation initiation factor IF-3 [Staphylococcus warneri L37603] Length = 175 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVDLDLVIVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKTINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ L E +I+ I+ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRQLEKFAEECKDIATIEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++LS Sbjct: 159 KMEGRQMFLMLSP 171 >gi|157364201|ref|YP_001470968.1| translation initiation factor IF-3 [Thermotoga lettingae TMO] gi|157314805|gb|ABV33904.1| translation initiation factor IF-3 [Thermotoga lettingae TMO] Length = 183 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + + P V KI+D K Y I K EARKKQK IK++K R I Sbjct: 49 LEIARRKGLDLVLVSPNGDPPVVKIMDFGKYMYQISKRQKEARKKQKQQEIKQMKFRLKI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK I FL +G KVK+++ FRGREI + G+++L I +I+ ++ + Sbjct: 109 DEHDYQTKLKHIRRFLGNGDKVKVTIMFRGREITFTEKGKQILERIANDVSDIAAVETDA 168 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L K Sbjct: 169 KLEGRDMWMQLKPK 182 >gi|27468273|ref|NP_764910.1| translation initiation factor IF-3 [Staphylococcus epidermidis ATCC 12228] gi|57867163|ref|YP_188818.1| translation initiation factor IF-3 [Staphylococcus epidermidis RP62A] gi|242242944|ref|ZP_04797389.1| translation initiation factor IF-3 [Staphylococcus epidermidis W23144] gi|251811074|ref|ZP_04825547.1| translation initiation factor IF-3 [Staphylococcus epidermidis BCM-HMP0060] gi|282875899|ref|ZP_06284766.1| translation initiation factor IF-3 [Staphylococcus epidermidis SK135] gi|293366371|ref|ZP_06613050.1| translation initiation factor IF3 [Staphylococcus epidermidis M23864:W2(grey)] gi|29427435|sp|Q8CS75|IF3_STAES RecName: Full=Translation initiation factor IF-3 gi|71152152|sp|Q5HNM3|IF3_STAEQ RecName: Full=Translation initiation factor IF-3 gi|27315819|gb|AAO04954.1|AE016748_188 translation initiation factor IF-3 [Staphylococcus epidermidis ATCC 12228] gi|57637821|gb|AAW54609.1| translation initiation factor IF-3 [Staphylococcus epidermidis RP62A] gi|242233545|gb|EES35857.1| translation initiation factor IF-3 [Staphylococcus epidermidis W23144] gi|251805409|gb|EES58066.1| translation initiation factor IF-3 [Staphylococcus epidermidis BCM-HMP0060] gi|281294924|gb|EFA87451.1| translation initiation factor IF-3 [Staphylococcus epidermidis SK135] gi|291319496|gb|EFE59863.1| translation initiation factor IF3 [Staphylococcus epidermidis M23864:W2(grey)] gi|319400996|gb|EFV89215.1| translation initiation factor IF-3 [Staphylococcus epidermidis FRI909] gi|329724673|gb|EGG61179.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU144] gi|329733783|gb|EGG70109.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU045] gi|329737419|gb|EGG73673.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU028] Length = 175 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKELRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|220930059|ref|YP_002506968.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|220000387|gb|ACL76988.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 176 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 81/132 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 QMA NLDLV+I + P VCKI+D K + K EA+K QK +KEV++ I+ Sbjct: 42 QMAITKNLDLVKIVPNGAPPVCKIMDYSKYVFEQGKKEKEAKKNQKVVSLKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K+ FL+DG KVK+S+KFRGRE+ + G+++L E+ + +PK Sbjct: 102 EHDFDVKVKSAYKFLKDGDKVKVSIKFRGREMKYTSDGKDVLEKFTSVVSEVGVAERQPK 161 Query: 122 FEGRQMIMILSS 133 EG+ MI+IL+ Sbjct: 162 LEGKSMIIILNP 173 >gi|266625013|ref|ZP_06117948.1| translation initiation factor IF-3 [Clostridium hathewayi DSM 13479] gi|288863093|gb|EFC95391.1| translation initiation factor IF-3 [Clostridium hathewayi DSM 13479] Length = 164 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LQMAKEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H R +L + + +I+ ID Sbjct: 90 DTNDLNTKMGAARKFLEKGDKVKVTLRFRGREMAHMSKSRYILEDFAKELADIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L+ K Sbjct: 150 KVEGRSMVMFLTPK 163 >gi|253989347|ref|YP_003040703.1| translation initiation factor if-3 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780797|emb|CAQ83959.1| translation initiation factor if-3 [Photorhabdus asymbiotica] Length = 131 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 1/130 (0%) Query: 7 ANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 +DLVEI + P VC+I+D K Y K+ E +KKQK +KE+K RP D D Q Sbjct: 1 MGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSIKEQKKKQKVIQVKEIKFRPGTDEGDYQ 60 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGR 125 VKL+ + FL DG K KI+++FRGRE+ HQ +G E+L+ I++ E++ ++ P K EGR Sbjct: 61 VKLRNLVRFLEDGDKAKITLRFRGREMAHQQIGVEMLNRIRDDLDELAVVESFPSKIEGR 120 Query: 126 QMIMILSSKC 135 QMIM+L+ K Sbjct: 121 QMIMVLAPKK 130 >gi|319892727|ref|YP_004149602.1| Translation initiation factor 3 [Staphylococcus pseudintermedius HKU10-03] gi|317162423|gb|ADV05966.1| Translation initiation factor 3 [Staphylococcus pseudintermedius HKU10-03] Length = 177 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA LD+V + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 41 LEMADRLGLDVVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKIINVKEIRLSPTI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KLK FL G KVK+S++FRGR I H+++G+ +L E +++ I+ +P Sbjct: 101 EEHDFNTKLKNGRKFLTKGDKVKVSIRFRGRAITHKEIGQRVLERYAEACQDLATIEQKP 160 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 161 KMEGRQMFLMLAP 173 >gi|209695238|ref|YP_002263167.1| translation initiation factor IF-3 [Aliivibrio salmonicida LFI1238] gi|238054432|sp|B6EN33|IF3_ALISL RecName: Full=Translation initiation factor IF-3 gi|208009190|emb|CAQ79444.1| translation initiation factor IF-3 [Aliivibrio salmonicida LFI1238] Length = 183 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A +DLVEI + P VC+++D K + K A E +KKQK KE+K RP Sbjct: 47 LDVALTAGVDLVEISPNAEPPVCRVMDYGKFLFEKAKAAKEQKKKQKQVQTKEIKFRPGT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL +G KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 107 DIGDYQVKLRNLTGFLEEGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 166 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 167 TRIEGRQMIMVLAPKK 182 >gi|254877295|ref|ZP_05250005.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843316|gb|EET21730.1| translation initiation factor IF-3 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 179 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EAN+DLVE+ ++ P VC+++D K + K +A+K QK T IKE+K+RPV Sbjct: 44 LALAEEANVDLVEMVANANPPVCRLMDYGKFLFEQGKKKAQAKKNQKQTQIKEIKLRPVT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H +LG ++L + E ++ +P Sbjct: 104 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHNELGMQMLQRMASDAAEYGVVEHQP 163 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 164 KMEGRQMIMVLGPKK 178 >gi|67920432|ref|ZP_00513952.1| Initiation factor 3 [Crocosphaera watsonii WH 8501] gi|67857916|gb|EAM53155.1| Initiation factor 3 [Crocosphaera watsonii WH 8501] Length = 179 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV + + P VC+I+D K ++ +K A EA+KKQ + +KEVKMR I Sbjct: 42 LKVAQERELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQHTADVKEVKMRYKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD QV++ FL+ G KVK ++ FRGREI H +L ++LLS + E++ I P Sbjct: 102 SEHDYQVRVNQAKRFLKSGDKVKATITFRGREIQHSNLAQDLLSRMATDLKELAEIQQAP 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M+M++S K Sbjct: 162 KREGRNMMMLMSPKK 176 >gi|289550563|ref|YP_003471467.1| Translation initiation factor 3 [Staphylococcus lugdunensis HKU09-01] gi|315658057|ref|ZP_07910930.1| translation initiation factor IF3 [Staphylococcus lugdunensis M23590] gi|289180095|gb|ADC87340.1| Translation initiation factor 3 [Staphylococcus lugdunensis HKU09-01] gi|315496947|gb|EFU85269.1| translation initiation factor IF3 [Staphylococcus lugdunensis M23590] Length = 184 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 48 LEMAERVELDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 108 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKFADECKDIATVEQKP 167 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 168 KMDGRQMFIMLAP 180 >gi|308126053|ref|ZP_05778795.2| translation initiation factor IF-3 [Vibrio parahaemolyticus K5030] gi|308113199|gb|EFO50739.1| translation initiation factor IF-3 [Vibrio parahaemolyticus K5030] Length = 159 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 30 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 89 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P + EGRQ Sbjct: 90 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVEAFPSRIEGRQ 149 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 150 MIMVLAPKK 158 >gi|308802129|ref|XP_003078378.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] gi|116056830|emb|CAL53119.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] Length = 266 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 +++A E LDLV + + P V +I++ K +Y +K+A EARKK +KE+KMR Sbjct: 121 LEIAAERELDLVVMSADANPPVARIMNYSKFKYEQEKSAREARKKAAATRVDLKELKMRY 180 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD +V+L++ FL G KVK+ +FRGRE +++GRE+ + E GE+ ++ Sbjct: 181 NIDTHDYEVRLRSALKFLEGGDKVKVICQFRGRENDFREIGREMFARFVEDIGEVGVLEN 240 Query: 119 EPKFEGRQMIMILSS 133 P EG M MI+S Sbjct: 241 RPNMEGNSMTMIISP 255 >gi|307718473|ref|YP_003874005.1| translation initiation factor IF-3 [Spirochaeta thermophila DSM 6192] gi|306532198|gb|ADN01732.1| translation initiation factor IF-3 [Spirochaeta thermophila DSM 6192] gi|315187011|gb|EFU20768.1| bacterial translation initiation factor 3 (bIF-3) [Spirochaeta thermophila DSM 6578] Length = 172 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVE+ P VCKILD K ++ +K E +KKQK +KEV+M+P I Sbjct: 36 LRRAREKGLDLVEVAPQAKPPVCKILDYGKYKFEQEKKLKETKKKQKQNKLKEVRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K + I FL +G KVK++++FRGRE+ H ++GR +L I E + ++ P Sbjct: 96 DSHDLEFKTRHIREFLEEGNKVKVTIRFRGRELAHTEIGRGVLEKILELLEDGYTVEKTP 155 Query: 121 KFEGRQMIMILSSKC 135 EGR M M+L+ K Sbjct: 156 SMEGRFMSMVLAPKS 170 >gi|114568677|ref|YP_755357.1| translation initiation factor 3 [Maricaulis maris MCS10] gi|114339139|gb|ABI64419.1| bacterial translation initiation factor 3 (bIF-3) [Maricaulis maris MCS10] Length = 201 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 63/127 (49%), Positives = 93/127 (73%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ + P VCKI+D KL+Y QK EA+KKQK+ IKE+KMRP ID+HD QV Sbjct: 75 GLDLVEVSPNADPPVCKIVDYGKLKYQDQKKKAEAKKKQKTVEIKEIKMRPNIDIHDYQV 134 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 K KA+ F G KVK++++FRGRE+ HQ+ G ++++ +KE F E+++++ EPK EGR M Sbjct: 135 KTKAMHRFFEAGDKVKVTLRFRGREMAHQNRGMDIMNRVKEDFDEVAKVEFEPKLEGRLM 194 Query: 128 IMILSSK 134 +M+++ + Sbjct: 195 VMVMAPR 201 >gi|242373972|ref|ZP_04819546.1| translation initiation factor IF-3 [Staphylococcus epidermidis M23864:W1] gi|242348326|gb|EES39928.1| translation initiation factor IF-3 [Staphylococcus epidermidis M23864:W1] Length = 175 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKVINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRVLEKFVDECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++L+ Sbjct: 159 KMEGRQMFIMLAP 171 >gi|258424097|ref|ZP_05686979.1| translation initiation factor IF-3 [Staphylococcus aureus A9635] gi|257845718|gb|EEV69750.1| translation initiation factor IF-3 [Staphylococcus aureus A9635] Length = 186 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLAP 182 >gi|253580168|ref|ZP_04857435.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848687|gb|EES76650.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 164 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 83/131 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P ID + Sbjct: 33 AQEAGLDLVKIAPQAKPPVCKIIDYGKYRYELARKEKEAKKKQKTIDVKEVRLSPNIDTN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ A FL G +VK++++FRGRE+ H R +L + ++ +++ ++ PK E Sbjct: 93 DLNTKVNAARKFLSKGDRVKVTLRFRGREMAHMASSRHVLDDFAKQLADVATVEKAPKVE 152 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 153 GRSMTMFLTEK 163 >gi|126697165|ref|YP_001092051.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9301] gi|166198962|sp|A3PFC5|IF3_PROM0 RecName: Full=Translation initiation factor IF-3 gi|126544208|gb|ABO18450.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9301] Length = 190 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|260589751|ref|ZP_05855664.1| translation initiation factor IF-3 [Blautia hansenii DSM 20583] gi|260539991|gb|EEX20560.1| translation initiation factor IF-3 [Blautia hansenii DSM 20583] Length = 164 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ IKEV++ P I+ + Sbjct: 33 AAEAGLDLVKIAPTAKPPVCKIIDYGKYKYELARKEKEAKKKQKTIEIKEVRLSPNIEEN 92 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 DL K+ FL G KVK++++FRGRE+ H + +L E +++ ++ PK E Sbjct: 93 DLNTKVNNARKFLTKGNKVKVTLRFRGREMAHMQSSKCILEKFAEILSDVAVVEKAPKVE 152 Query: 124 GRQMIMILSSK 134 GR M M L+ K Sbjct: 153 GRSMTMFLTEK 163 >gi|320102028|ref|YP_004177619.1| translation initiation factor 3 (bIF-3) [Isosphaera pallida ATCC 43644] gi|319749310|gb|ADV61070.1| bacterial translation initiation factor 3 (bIF-3) [Isosphaera pallida ATCC 43644] Length = 172 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 87/135 (64%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+EA LDLVE+ + P VCKI+D K +Y +K A ++ K +KE+++RP Sbjct: 40 LELAREAGLDLVEVSPNERPPVCKIMDYGKFKYEQKKKA--SKNKPHQAVLKEIRVRPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K GFL D KV++ V+FRGRE+ H + GR++++ + + ++++I+ P Sbjct: 98 GEHDIEFKVKQARGFLADKDKVQLVVQFRGRELAHIEEGRKVMNEVLQMLEDVAKIERAP 157 Query: 121 KFEGRQMIMILSSKC 135 E R+MI I++ K Sbjct: 158 TMENRKMIAIVAPKV 172 >gi|330685702|gb|EGG97341.1| translation initiation factor IF-3 [Staphylococcus epidermidis VCU121] Length = 175 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVDLDLVIVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKTINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ L E +++ I+ +P Sbjct: 99 EEHDFQTKLKNGRKFLSKGDKCKVSIRFRGRAITHKEIGQRQLEKFAEECKDLATIEQKP 158 Query: 121 KFEGRQMIMILSS 133 K EGRQM ++LS Sbjct: 159 KMEGRQMFLMLSP 171 >gi|325954888|ref|YP_004238548.1| translation initiation factor IF-3 [Weeksella virosa DSM 16922] gi|323437506|gb|ADX67970.1| translation initiation factor IF-3 [Weeksella virosa DSM 16922] Length = 156 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I P VC++++ +K Y +K E + KQ+ +KE++ P Sbjct: 22 LELAEEQGLDLVMISEKAVPPVCRVVEYKKFLYEQKKREKELKAKQQKVVVKEIRFGPQT 81 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K FL +G K+K V F+GR I+ +D G LL + + ++ +++ P Sbjct: 82 DDHDFDFKKKHARSFLEEGSKLKAYVFFKGRSIIFKDQGEILLLRLAQELEDVGKVEQLP 141 Query: 121 KFEGRQMIMILSSKC 135 K EG++MIM+++ K Sbjct: 142 KLEGKRMIMMMAPKK 156 >gi|323704475|ref|ZP_08116053.1| translation initiation factor IF-3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535937|gb|EGB25710.1| translation initiation factor IF-3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 155 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E ++DLV+I P VCK++D K RY K E++KKQK IKE++M P I+ Sbjct: 21 KIALERHIDLVKIAPQANPPVCKLMDFGKYRYEQSKKEKESKKKQKVINIKEIRMTPAIE 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K+ FL+DG KVK++++FRGRE H +L ELL+ + E ++ P Sbjct: 81 EHDFGVKVKSAMKFLKDGDKVKVTIRFRGREASHTNLAEELLNRFAKSLEEYGNVEKAPN 140 Query: 122 FEGRQMIMILSSKCV 136 EGR ++MIL+ K V Sbjct: 141 MEGRNLMMILAPKNV 155 >gi|28493131|ref|NP_787292.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist] gi|28572755|ref|NP_789535.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27] gi|39931266|sp|Q83GT2|IF3_TROWT RecName: Full=Translation initiation factor IF-3 gi|39931269|sp|Q83HH0|IF3_TROW8 RecName: Full=Translation initiation factor IF-3 gi|28410888|emb|CAD67273.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27] gi|28476171|gb|AAO44261.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist] Length = 182 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 73/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVE+ P V KI+D K RY + A EAR++Q +KEV+ R I Sbjct: 29 LRLAGEVGLDLVEVSPFSKPPVVKIMDYGKFRYEASQKAKEARRRQSGVSVKEVRFRLKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D VKL+ FL+ G KVK+ + FRGRE +LG +LL + E D Sbjct: 89 CDNDYDVKLRKAISFLQAGDKVKVMILFRGREQSRPELGVKLLKKFADDISEFGSADSLS 148 Query: 121 KFEGRQMIMILSS 133 + +GR M +++S Sbjct: 149 RTDGRGMAIMVSP 161 >gi|257428462|ref|ZP_05604860.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 65-1322] gi|282908992|ref|ZP_06316810.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911308|ref|ZP_06319110.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WBG10049] gi|297590785|ref|ZP_06949423.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus MN8] gi|257275303|gb|EEV06790.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 65-1322] gi|282325003|gb|EFB55313.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327256|gb|EFB57551.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|297575671|gb|EFH94387.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus MN8] gi|312437861|gb|ADQ76932.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH60] Length = 186 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLAP 182 >gi|315634191|ref|ZP_07889480.1| translation initiation factor IF3 [Aggregatibacter segnis ATCC 33393] gi|315477441|gb|EFU68184.1| translation initiation factor IF3 [Aggregatibacter segnis ATCC 33393] Length = 154 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 1/127 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D D QVKL Sbjct: 27 DLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKL 86 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMI 128 +++ FL DG K KI+V+FRGRE+ HQD+G ++L +K +IS ++ P K EGRQ + Sbjct: 87 RSLIRFLEDGDKAKITVRFRGREMAHQDIGFDVLERVKNDLADISVVESAPGKLEGRQAV 146 Query: 129 MILSSKC 135 M+L+ K Sbjct: 147 MVLAPKK 153 >gi|253732332|ref|ZP_04866497.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734535|ref|ZP_04868700.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TCH130] gi|257794066|ref|ZP_05643045.1| translation initiation factor IF-3 [Staphylococcus aureus A9781] gi|258415770|ref|ZP_05682041.1| translation initiation factor IF-3 [Staphylococcus aureus A9763] gi|258421993|ref|ZP_05684913.1| translation initiation factor IF-3 [Staphylococcus aureus A9719] gi|297207606|ref|ZP_06924041.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911688|ref|ZP_07129132.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH70] gi|304380728|ref|ZP_07363397.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253723932|gb|EES92661.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727476|gb|EES96205.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TCH130] gi|257788038|gb|EEV26378.1| translation initiation factor IF-3 [Staphylococcus aureus A9781] gi|257839363|gb|EEV63836.1| translation initiation factor IF-3 [Staphylococcus aureus A9763] gi|257842037|gb|EEV66466.1| translation initiation factor IF-3 [Staphylococcus aureus A9719] gi|269941161|emb|CBI49548.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus TW20] gi|283470948|emb|CAQ50159.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ST398] gi|296887623|gb|EFH26521.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887109|gb|EFK82310.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus TCH70] gi|304340727|gb|EFM06658.1| translation initiation factor IF3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320140441|gb|EFW32295.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143979|gb|EFW35748.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA177] Length = 186 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 50 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 110 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 169 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 170 KMDGRQMFIMLAP 182 >gi|34540736|ref|NP_905215.1| translation initiation factor IF-3 [Porphyromonas gingivalis W83] gi|39931198|sp|Q7MVQ6|IF3_PORGI RecName: Full=Translation initiation factor IF-3 gi|34397050|gb|AAQ66114.1| translation initiation factor IF-3 [Porphyromonas gingivalis W83] Length = 201 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 76/135 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ +LDLVEI + P VC++ D +K Y ++K A E + K IKE++ P D Sbjct: 40 RIAESQDLDLVEISPNADPPVCRVTDYQKFVYQLKKKAKEQKAKSVKIVIKEIRFGPQTD 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL++G KVK V FRGR I+ ++ G LL + +R++ P Sbjct: 100 DHDYNFKLKHAKEFLQEGSKVKAYVFFRGRSILFKEQGEVLLLRFANDLEDFARVEQMPI 159 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 160 LEGKRMTIMLTPKSA 174 >gi|315181383|gb|ADT88296.1| translation initiation factor IF-3 [Vibrio furnissii NCTC 11218] Length = 166 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K EGRQ Sbjct: 97 KLRNLTSFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEFAVVESFPTKIEGRQ 156 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 157 MIMVLAPKK 165 >gi|56460506|ref|YP_155787.1| translation initiation factor IF-3 [Idiomarina loihiensis L2TR] gi|61213072|sp|Q5QYN5|IF3_IDILO RecName: Full=Translation initiation factor IF-3 gi|56179516|gb|AAV82238.1| Translation initiation factor 3 [Idiomarina loihiensis L2TR] Length = 181 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVE+ + P VC+++D K + K E +KKQK +KEVK RP Sbjct: 45 LDAAAEAGVDLVEMSPNAEPPVCRLMDYGKFLFEKSKEQKEQKKKQKQIQVKEVKFRPGT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL G K K++++FRGRE+ HQ+LG ELL+ +K EIS ++ P Sbjct: 105 DEGDYQVKLRNLRRFLEGGDKTKVTIRFRGREMAHQELGIELLNRVKNDLEEISIVESFP 164 Query: 121 KF-EGRQMIMILSS 133 + EGRQMIM+L+ Sbjct: 165 RRAEGRQMIMVLAP 178 >gi|114332290|ref|YP_748512.1| translation initiation factor IF-3 [Nitrosomonas eutropha C91] gi|114309304|gb|ABI60547.1| bacterial translation initiation factor 3 (bIF-3) [Nitrosomonas eutropha C91] Length = 162 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 87/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E+ +D+VEI S P VC+++D K Y K +A+ +QK +KE+K+RP D Sbjct: 19 ELAEESGVDIVEIAPSAEPPVCRLMDYGKYLYQESKKKHDAKLRQKQIQVKEIKLRPNTD 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D +KL+ + FL +G KVK++++FRGRE+ HQ+ G LL ++E E + ++ P+ Sbjct: 79 EGDYSIKLRNLINFLNEGDKVKVTLRFRGREMAHQEFGIRLLERVREELEEHAVVEQFPR 138 Query: 122 FEGRQMIMILSSKC 135 EGRQM+M+L+ + Sbjct: 139 LEGRQMVMVLAPRK 152 >gi|238924313|ref|YP_002937829.1| translation initiation factor IF-3 [Eubacterium rectale ATCC 33656] gi|238875988|gb|ACR75695.1| translation initiation factor IF-3 [Eubacterium rectale ATCC 33656] gi|291525083|emb|CBK90670.1| bacterial translation initiation factor 3 (bIF-3) [Eubacterium rectale DSM 17629] gi|291529178|emb|CBK94764.1| bacterial translation initiation factor 3 (bIF-3) [Eubacterium rectale M104/1] Length = 164 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A EA LDLV+I + P VCK++D K RY + +A+KKQK+ +KE+++ P I+ Sbjct: 31 KIADEAGLDLVKIAPNAKPPVCKVIDYGKYRYEQARKEKDAKKKQKTVELKEIRLSPNIE 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A FL G KVKI+++FRGRE+ H + + +L +I E +++ ++ PK Sbjct: 91 ANDLNTKMNAAKKFLAKGNKVKITLRFRGREMAHMNASKHILDDIAENLSDVAVVEKAPK 150 Query: 122 FEGRQMIMILSSK 134 EGR + M+L+ K Sbjct: 151 VEGRSIGMVLAEK 163 >gi|188586438|ref|YP_001917983.1| translation initiation factor 3 (bIF-3) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351125|gb|ACB85395.1| translation initiation factor 3 (bIF-3) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 153 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV + P VC+I+D K +Y K +A+KKQK+ +KEVK+RP I Sbjct: 18 LKIAEENNLDLVTVAPKAKPPVCRIMDYGKFKYEQNKKEKQAKKKQKTINVKEVKLRPNI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL FL+ KVK+++ FRGREI H + G+EL + + +I+ I+ +P Sbjct: 78 EEHDFNTKLNNARKFLKKEDKVKVTIMFRGREITHPENGKELCQKMAKEVEDIAVIEKKP 137 Query: 121 KFEGRQMIMILSSK 134 EG+ MIM+L+ + Sbjct: 138 SVEGKNMIMVLAPR 151 >gi|126215722|sp|Q4ULG2|IF3_RICFE RecName: Full=Translation initiation factor IF-3 Length = 185 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A+LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 49 LDMAERASLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ +ID Sbjct: 109 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGPIKIDQHA 168 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 169 KMEGKQMIMIVSP 181 >gi|52425109|ref|YP_088246.1| InfC protein [Mannheimia succiniciproducens MBEL55E] gi|52307161|gb|AAU37661.1| InfC protein [Mannheimia succiniciproducens MBEL55E] Length = 137 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A+E LDLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP Sbjct: 1 MSRAEEVELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ I FL DG KVKI+V+FRGRE+ HQD+G ++L +K+ EI+ ++ P Sbjct: 61 DEGDYQVKLRNIVRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKQDTAEIAMVESAP 120 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 121 GKLEGRQAVMVIAPKK 136 >gi|254457526|ref|ZP_05070954.1| translation initiation factor IF-3 [Campylobacterales bacterium GD 1] gi|207086318|gb|EDZ63602.1| translation initiation factor IF-3 [Campylobacterales bacterium GD 1] Length = 163 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 69/133 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E +DLV I + P V KI+D K RY +K E RK Q +KE+K+ I Sbjct: 29 MSKANELGMDLVLIAPTAKPPVAKIMDYGKYRYQEEKKLKEQRKNQVKIVVKEIKLSVKI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + G+E+L + ++ ++ P Sbjct: 89 AENDIAYKVKHAREFLEKGFHVKFRVFLRGREMAHPEAGKEVLLRVWPMVEDLGIMEKPP 148 Query: 121 KFEGRQMIMILSS 133 KFEGR M ++ Sbjct: 149 KFEGRYFNMYVTP 161 >gi|166032010|ref|ZP_02234839.1| hypothetical protein DORFOR_01712 [Dorea formicigenerans ATCC 27755] gi|166028463|gb|EDR47220.1| hypothetical protein DORFOR_01712 [Dorea formicigenerans ATCC 27755] Length = 164 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRISPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E E++ ++ Sbjct: 90 DTNDLNTKVNNAKKFIAKGNKVKVTLRFRGREMAHMQQSKHILDDFAEMLAEVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|167749029|ref|ZP_02421156.1| hypothetical protein ANACAC_03810 [Anaerostipes caccae DSM 14662] gi|317472572|ref|ZP_07931891.1| translation initiation factor IF-3 [Anaerostipes sp. 3_2_56FAA] gi|167651651|gb|EDR95780.1| hypothetical protein ANACAC_03810 [Anaerostipes caccae DSM 14662] gi|316899981|gb|EFV21976.1| translation initiation factor IF-3 [Anaerostipes sp. 3_2_56FAA] Length = 164 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A EA LDLV+I P VCKI++ K +Y + + EA+KKQK+ +KEV+M P ID Sbjct: 31 KKADEAELDLVKISPKAKPPVCKIINYGKYKYELARKEKEAKKKQKTVEVKEVRMSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ FL G +VK++++FRGRE+ H + + +L + +++ +D PK Sbjct: 91 TNDLNTKISHARKFLSKGARVKVTLRFRGRELAHVNSSKGILDEFAKALDDVATVDKRPK 150 Query: 122 FEGRQMIMILSSK 134 FEGR MIM L+ K Sbjct: 151 FEGRSMIMFLAPK 163 >gi|167758931|ref|ZP_02431058.1| hypothetical protein CLOSCI_01277 [Clostridium scindens ATCC 35704] gi|167663338|gb|EDS07468.1| hypothetical protein CLOSCI_01277 [Clostridium scindens ATCC 35704] Length = 164 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I P VCKI+D K RY + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPKAQPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL K+ F+ G KVK++++FRGRE+ H + +L + + +++ ++ Sbjct: 90 ETNDLNTKVNNAKKFISKGNKVKVTLRFRGREMAHMQQSKHILDDFAKLLEDVAVVEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|256822931|ref|YP_003146894.1| translation initiation factor IF-3 [Kangiella koreensis DSM 16069] gi|256796470|gb|ACV27126.1| translation initiation factor IF-3 [Kangiella koreensis DSM 16069] Length = 179 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA+ DLVE+ P VCK++D K + +K A+KKQK T +KE+K RP Sbjct: 43 LAQAKEASQDLVEVSPDADPPVCKVMDFGKFLFEQKKAKAAAKKKQKVTHVKEIKFRPGT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL DG K K++V+FRGRE+ HQ+LG ELL +++ E ++ P Sbjct: 103 DIGDYQVKLRNLIRFLEDGDKAKVTVRFRGREMAHQELGMELLKRVEKDLEEYGAVEHRP 162 Query: 121 KFEGRQMIMILSSKC 135 EGRQM M++ K Sbjct: 163 SMEGRQMTMVIGPKK 177 >gi|325279134|ref|YP_004251676.1| Translation initiation factor IF-3 [Odoribacter splanchnicus DSM 20712] gi|324310943|gb|ADY31496.1| Translation initiation factor IF-3 [Odoribacter splanchnicus DSM 20712] Length = 179 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A +DLVEI + P VC+I+D K Y ++K E + K +KE++ P Sbjct: 45 LAMAEAAGMDLVEISPNAEPPVCRIIDYSKFLYQLKKKQKEIKAKSVKVVVKEIRFGPQT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++G KV+ V F+GR I+ +D G +LLS E +++ P Sbjct: 105 DDHDFNFKLKHAKEFLQEGAKVRAYVFFKGRSILFKDQGADLLSRFIAELEEYGKVEAAP 164 Query: 121 KFEGRQMIMILSSKC 135 K EG++MI++L+ K Sbjct: 165 KLEGKKMIVVLAPKK 179 >gi|330752454|emb|CBL87404.1| translation initiation factor IF-3 [uncultured Flavobacteria bacterium] Length = 173 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 75/133 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + NLDLVEI P VCK++D +K Y +K + K +KE++ P Sbjct: 38 LAIANDQNLDLVEISPKAVPPVCKVMDYKKFLYEQKKREKALKSKAAKVVVKEIRFGPNT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K + FL +G K+K V F+GR I+ ++ G+ LL + + ++ +++ P Sbjct: 98 DDHDYNFKKKHAEKFLNEGAKLKAFVFFKGRSIIFKEQGQILLLRLAQDLEKLGKVEQMP 157 Query: 121 KFEGRQMIMILSS 133 K EG++MIM ++ Sbjct: 158 KLEGKRMIMFIAP 170 >gi|148982343|ref|ZP_01816720.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrionales bacterium SWAT-3] gi|145960523|gb|EDK25886.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrionales bacterium SWAT-3] Length = 156 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQD+G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKADTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 147 MIMVLAPKK 155 >gi|260434416|ref|ZP_05788386.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109] gi|260412290|gb|EEX05586.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109] Length = 217 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + LDLV + P VC+I+D K ++ +K A EA+KK T +KEVKMR I Sbjct: 47 LDVASDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRG EI H L LL + + E + I P Sbjct: 107 DQHDYDVRIGQAQRFLKAGDKVKCTVIFRGLEIQHTALAETLLRRMAKDLEEKAEIQQAP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM L+ + Sbjct: 167 KREGRNMIMFLTPRKT 182 >gi|157825815|ref|YP_001493535.1| translation initiation factor IF-3 [Rickettsia akari str. Hartford] gi|157799773|gb|ABV75027.1| translation initiation factor IF-3 [Rickettsia akari str. Hartford] Length = 147 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERVGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|254292437|ref|YP_003058460.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814] gi|254040968|gb|ACT57763.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814] Length = 179 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 73/134 (54%), Positives = 95/134 (70%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+ P+V KILD KLR+ QK A+KKQK+ +KE+KMRP I Sbjct: 46 LDAAREAGLDLVEVSGGSQPTVVKILDYGKLRFEEQKKRAAAKKKQKAADLKEIKMRPNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F DG KVK++++FRGRE+ HQ LG ELL +KE F EIS+++ EP Sbjct: 106 DTHDYEVKKKAMTRFFDDGDKVKVTLRFRGREMAHQQLGMELLQRVKEDFAEISKVETEP 165 Query: 121 KFEGRQMIMILSSK 134 K EGRQM M+LS + Sbjct: 166 KLEGRQMTMVLSPR 179 >gi|188994827|ref|YP_001929079.1| translation initiation factor IF-3 [Porphyromonas gingivalis ATCC 33277] gi|238691476|sp|B2RJD7|IF3_PORG3 RecName: Full=Translation initiation factor IF-3 gi|188594507|dbj|BAG33482.1| translation initiation factor IF-3 [Porphyromonas gingivalis ATCC 33277] Length = 212 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 76/135 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ +LDLVEI + P VC++ D +K Y ++K A E + K IKE++ P D Sbjct: 40 RIAESQDLDLVEISPNADPPVCRVTDYQKFVYQLKKKAKEQKAKSVKIVIKEIRFGPQTD 99 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KLK FL++G KVK V FRGR I+ ++ G LL + +R++ P Sbjct: 100 DHDYNFKLKHAKEFLQEGSKVKAYVFFRGRSILFKEQGEVLLLRFANDLEDFARVEQMPI 159 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 160 LEGKRMTIMLTPKSA 174 >gi|86134204|ref|ZP_01052786.1| translation initiation factor IF-3 [Polaribacter sp. MED152] gi|85821067|gb|EAQ42214.1| translation initiation factor IF-3 [Polaribacter sp. MED152] Length = 153 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 76/134 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E LDLVEI P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 EMAREQELDLVEISPKAKPPVCKIIDYKKFLYEQKKREKALKSKATKVTIKEIRFGPQTD 77 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K FL+DG K+K V F+GR I+ ++ G+ LL + + E +++ PK Sbjct: 78 EHDYEFKKKHAIKFLQDGAKLKAFVFFKGRSIIFKEQGQILLLKLAQELEEYGKVEQLPK 137 Query: 122 FEGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 138 LEGKRMIMFIAPKK 151 >gi|156974365|ref|YP_001445272.1| hypothetical protein VIBHAR_02080 [Vibrio harveyi ATCC BAA-1116] gi|156525959|gb|ABU71045.1| hypothetical protein VIBHAR_02080 [Vibrio harveyi ATCC BAA-1116] Length = 166 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE +++ ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDLAVVESFPSKIEGRQ 156 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 157 MIMVLAPKK 165 >gi|49483923|ref|YP_041147.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA252] gi|257431096|ref|ZP_05607473.1| infC, translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 68-397] gi|257433779|ref|ZP_05610137.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus E1410] gi|257436695|ref|ZP_05612739.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M876] gi|282904252|ref|ZP_06312140.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C160] gi|282906077|ref|ZP_06313932.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282914477|ref|ZP_06322263.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M899] gi|282919446|ref|ZP_06327181.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C427] gi|282924823|ref|ZP_06332489.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C101] gi|283958432|ref|ZP_06375883.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus A017934/97] gi|293510570|ref|ZP_06669275.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M809] gi|293537112|ref|ZP_06671792.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M1015] gi|56748918|sp|Q6GG25|IF3_STAAR RecName: Full=Translation initiation factor IF-3 gi|49242052|emb|CAG40751.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MRSA252] gi|257278044|gb|EEV08692.1| infC, translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 68-397] gi|257281872|gb|EEV12009.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus E1410] gi|257284046|gb|EEV14169.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M876] gi|282313189|gb|EFB43585.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C101] gi|282317256|gb|EFB47630.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C427] gi|282321658|gb|EFB51983.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M899] gi|282331369|gb|EFB60883.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282595870|gb|EFC00834.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus C160] gi|283790581|gb|EFC29398.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus A017934/97] gi|290919957|gb|EFD97025.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M1015] gi|291466461|gb|EFF08982.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus M809] gi|315195585|gb|EFU25972.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS00] Length = 175 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLAP 171 >gi|21283353|ref|NP_646441.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MW2] gi|49486507|ref|YP_043728.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650552|ref|YP_186565.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus COL] gi|82751269|ref|YP_417010.1| translation initiation factor IF-3 [Staphylococcus aureus RF122] gi|87160953|ref|YP_494322.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221786|ref|YP_001332608.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. Newman] gi|221142569|ref|ZP_03567062.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317176|ref|ZP_04840389.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006465|ref|ZP_05145066.2| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258438249|ref|ZP_05689533.1| translation initiation factor IF-3 [Staphylococcus aureus A9299] gi|258443707|ref|ZP_05692046.1| translation initiation factor IF-3 [Staphylococcus aureus A8115] gi|258445918|ref|ZP_05694094.1| translation initiation factor IF-3 [Staphylococcus aureus A6300] gi|258448401|ref|ZP_05696518.1| translation initiation factor IF-3 [Staphylococcus aureus A6224] gi|258451805|ref|ZP_05699827.1| translation initiation factor IF-3 [Staphylococcus aureus A5948] gi|258454293|ref|ZP_05702262.1| translation initiation factor IF-3 [Staphylococcus aureus A5937] gi|269203299|ref|YP_003282568.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ED98] gi|282893176|ref|ZP_06301410.1| translation initiation factor IF-3 [Staphylococcus aureus A8117] gi|282916940|ref|ZP_06324698.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus D139] gi|282920221|ref|ZP_06327946.1| translation initiation factor IF-3 [Staphylococcus aureus A9765] gi|282927811|ref|ZP_06335422.1| translation initiation factor IF-3 [Staphylococcus aureus A10102] gi|283770745|ref|ZP_06343637.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus H19] gi|284024729|ref|ZP_06379127.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 132] gi|294848702|ref|ZP_06789448.1| translation initiation factor IF-3 [Staphylococcus aureus A9754] gi|295405991|ref|ZP_06815799.1| translation initiation factor IF-3 [Staphylococcus aureus A8819] gi|296274892|ref|ZP_06857399.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MR1] gi|297245083|ref|ZP_06928960.1| translation initiation factor IF-3 [Staphylococcus aureus A8796] gi|54037390|sp|P65140|IF3_STAAN RecName: Full=Translation initiation factor IF-3 gi|54037391|sp|P65141|IF3_STAAW RecName: Full=Translation initiation factor IF-3 gi|54041112|sp|P65139|IF3_STAAM RecName: Full=Translation initiation factor IF-3 gi|56748907|sp|Q6G8P5|IF3_STAAS RecName: Full=Translation initiation factor IF-3 gi|71152151|sp|Q5HF92|IF3_STAAC RecName: Full=Translation initiation factor IF-3 gi|123740967|sp|Q2YTA9|IF3_STAAB RecName: Full=Translation initiation factor IF-3 gi|123749604|sp|Q2FG56|IF3_STAA3 RecName: Full=Translation initiation factor IF-3 gi|172048940|sp|A6QHL4|IF3_STAAE RecName: Full=Translation initiation factor IF-3 gi|21204793|dbj|BAB95489.1| translation initiation factor IF-3 infC [Staphylococcus aureus subsp. aureus MW2] gi|49244950|emb|CAG43411.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284738|gb|AAW36832.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus COL] gi|82656800|emb|CAI81229.1| translation initiation factor IF-3 [Staphylococcus aureus RF122] gi|87126927|gb|ABD21441.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374586|dbj|BAF67846.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. Newman] gi|257848293|gb|EEV72284.1| translation initiation factor IF-3 [Staphylococcus aureus A9299] gi|257851113|gb|EEV75056.1| translation initiation factor IF-3 [Staphylococcus aureus A8115] gi|257855160|gb|EEV78099.1| translation initiation factor IF-3 [Staphylococcus aureus A6300] gi|257858369|gb|EEV81254.1| translation initiation factor IF-3 [Staphylococcus aureus A6224] gi|257860517|gb|EEV83343.1| translation initiation factor IF-3 [Staphylococcus aureus A5948] gi|257863523|gb|EEV86282.1| translation initiation factor IF-3 [Staphylococcus aureus A5937] gi|262075589|gb|ACY11562.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ED98] gi|282319427|gb|EFB49779.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus D139] gi|282590321|gb|EFB95400.1| translation initiation factor IF-3 [Staphylococcus aureus A10102] gi|282594569|gb|EFB99554.1| translation initiation factor IF-3 [Staphylococcus aureus A9765] gi|282764494|gb|EFC04620.1| translation initiation factor IF-3 [Staphylococcus aureus A8117] gi|283460892|gb|EFC07982.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus H19] gi|294824728|gb|EFG41151.1| translation initiation factor IF-3 [Staphylococcus aureus A9754] gi|294968988|gb|EFG45009.1| translation initiation factor IF-3 [Staphylococcus aureus A8819] gi|297178163|gb|EFH37411.1| translation initiation factor IF-3 [Staphylococcus aureus A8796] gi|298694951|gb|ADI98173.1| Translation initiation factor 3 [Staphylococcus aureus subsp. aureus ED133] gi|302333346|gb|ADL23539.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751507|gb|ADL65684.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312830059|emb|CBX34901.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130686|gb|EFT86672.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS03] gi|315198623|gb|EFU28951.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus CGS01] gi|323440775|gb|EGA98484.1| translation initiation factor IF-3 [Staphylococcus aureus O11] gi|323442930|gb|EGB00553.1| translation initiation factor IF-3 [Staphylococcus aureus O46] gi|329314353|gb|AEB88766.1| Translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus T0131] gi|329727496|gb|EGG63952.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21172] gi|329728418|gb|EGG64855.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21189] gi|329733254|gb|EGG69591.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 21193] Length = 175 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLAP 171 >gi|226324557|ref|ZP_03800075.1| hypothetical protein COPCOM_02341 [Coprococcus comes ATCC 27758] gi|225207005|gb|EEG89359.1| hypothetical protein COPCOM_02341 [Coprococcus comes ATCC 27758] Length = 164 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++AQEA LDLV+I + P VCKI+D K RY + EA+KKQ++ +KEV++ P I Sbjct: 30 MKLAQEAELDLVKIAPTAKPPVCKIIDYGKYRYEQARKEKEAKKKQRTVEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H + +L + E+ +++ I+ Sbjct: 90 DTNDLNTKMNNARKFISKGNKVKVTLRFRGREMAHMQQSKHILDDFAEKMKDVAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 150 KLEGRSLSMVLTEK 163 >gi|269963855|ref|ZP_06178167.1| initiation factor IF3 [Vibrio harveyi 1DA3] gi|269831342|gb|EEZ85489.1| initiation factor IF3 [Vibrio harveyi 1DA3] Length = 166 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE + + ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDFAVVESFPSKIEGRQ 156 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 157 MIMVLAPKK 165 >gi|123969378|ref|YP_001010236.1| translation initiation factor IF-3 [Prochlorococcus marinus str. AS9601] gi|166198966|sp|A2BTL8|IF3_PROMS RecName: Full=Translation initiation factor IF-3 gi|123199488|gb|ABM71129.1| Translation Initiation factor 3 [Prochlorococcus marinus str. AS9601] Length = 190 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMANDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|189424929|ref|YP_001952106.1| translation initiation factor IF-3 [Geobacter lovleyi SZ] gi|189421188|gb|ACD95586.1| translation initiation factor IF-3 [Geobacter lovleyi SZ] Length = 157 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + TP VC+I+D K +Y K EA+KKQ +KEVK+RP Sbjct: 20 LEAAEARQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQEAKKKQVQVQVKEVKIRPKT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+K + FL +G K K+++ FRGREI HQD+GR ++ +I+ I+ P Sbjct: 80 DDHDLDFKVKHVRRFLEEGNKAKVTLVFRGREITHQDIGRAVIEKFASELADIAVIEVSP 139 Query: 121 KFEGRQMIMILSSKC 135 + +GRQM MI++ K Sbjct: 140 RVDGRQMFMIVAPKV 154 >gi|169656669|ref|YP_001428924.2| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|164551737|gb|ABU61968.2| translation initiation factor IF-3 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 173 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 38 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 98 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 158 KLEGRQMIMVLGPKK 172 >gi|304317240|ref|YP_003852385.1| translation initiation factor IF-3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778742|gb|ADL69301.1| translation initiation factor IF-3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 170 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 84/135 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E ++DLV+I P VCK++D K RY K E++KKQK IKE++M P I+ Sbjct: 36 KIALERHIDLVKIAPQANPPVCKLMDFGKYRYEQSKKEKESKKKQKVINIKEIRMTPAIE 95 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK++++FRGRE H +L ELL+ + E ++ P Sbjct: 96 EHDFGVKVKNAIKFLKDGDKVKVTIRFRGREAAHTNLAEELLNRFAKSVEEYGNVEKAPN 155 Query: 122 FEGRQMIMILSSKCV 136 EGR ++MILS K V Sbjct: 156 MEGRNLMMILSPKNV 170 >gi|293503555|ref|ZP_06667402.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 58-424] gi|295428252|ref|ZP_06820881.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|291095221|gb|EFE25486.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus 58-424] gi|295127652|gb|EFG57289.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus EMRSA16] Length = 177 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 41 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 101 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 160 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 161 KMDGRQMFIMLAP 173 >gi|171058429|ref|YP_001790778.1| initiation factor 3 [Leptothrix cholodnii SP-6] gi|170775874|gb|ACB34013.1| initiation factor 3 [Leptothrix cholodnii SP-6] Length = 135 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 88/132 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 M+ E ++DLVEI ++ P VC+++D K +Y QK A EA+ KQ IKEVK RP D Sbjct: 1 MSAENDVDLVEISATAQPPVCRLMDYGKFKYLEQKKAAEAKAKQHVIDIKEVKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K++ + FL +G K K+++++RGREI HQD+G LL I++ ++S ++ P+ Sbjct: 61 GDYQIKMRNLRRFLEEGDKGKVTLRYRGREITHQDIGMRLLERIRDELTDVSVVENMPRL 120 Query: 123 EGRQMIMILSSK 134 EGRQMIM+L K Sbjct: 121 EGRQMIMVLGPK 132 >gi|123967058|ref|YP_001012139.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9515] gi|166198965|sp|A2BZ21|IF3_PROM5 RecName: Full=Translation initiation factor IF-3 gi|123201424|gb|ABM73032.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9515] Length = 195 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 78/136 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + P Sbjct: 107 DKHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHSNLAETLLLRMANDLEEQSEVQQRP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|156346163|ref|XP_001621458.1| hypothetical protein NEMVEDRAFT_v1g231409 [Nematostella vectensis] gi|156207414|gb|EDO29358.1| predicted protein [Nematostella vectensis] Length = 177 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+A LDLV+I P VCK++D K +Y +K E +KKQ T IKE+K RP Sbjct: 42 LELAQQAELDLVQIS-DSDPIVCKLMDFGKFQYEQKKKQAEVKKKQHQTQIKEMKFRPAT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K++++FRGRE+ HQDLG +L+ I+ E ++ P Sbjct: 101 EEGDYQVKLRNLVRFLEAGDKAKVTLRFRGREMAHQDLGMQLMERIENDLQEQGVVEQRP 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM+M+++ K Sbjct: 161 KMEGRQMVMVIAPKK 175 >gi|239617823|ref|YP_002941145.1| translation initiation factor IF-3 [Kosmotoga olearia TBF 19.5.1] gi|239506654|gb|ACR80141.1| translation initiation factor IF-3 [Kosmotoga olearia TBF 19.5.1] Length = 184 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P V +I+D K +Y +K A EA+KK K +K++K R I Sbjct: 42 LDVAREKGLDLVLVSPNANPPVARIMDYGKYKYEKEKRAKEAKKKAKQVQLKQMKFRLRI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K+ I FL G KV++ + FRGRE+ D G++LL + E EI+ ID Sbjct: 102 EDHDFHTKVNRIRQFLSKGNKVRVVIMFRGREMAFTDQGKQLLDRVAEELKEIAEIDKSA 161 Query: 121 KFEGRQMIMILSSKC 135 K EGR M MIL K Sbjct: 162 KLEGRDMWMILRPKS 176 >gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio sp. AND4] gi|159175409|gb|EDP60206.1| 50S ribosomal protein L35 [Vibrio sp. AND4] Length = 166 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE + + ++ P + EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVDFAVVESFPSRIEGRQ 156 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 157 MIMVLAPKK 165 >gi|73662393|ref|YP_301174.1| translation initiation factor IF-3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123775365|sp|Q49YB2|IF3_STAS1 RecName: Full=Translation initiation factor IF-3 gi|72494908|dbj|BAE18229.1| translation initiation factor IF-3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 175 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ LD+V + + P V +I+D K ++ QK E +KKQK+ +KE+++ P I Sbjct: 39 LEMAERVGLDVVIMAPNAKPPVARIMDYGKYKFEQQKKEKEMKKKQKTINLKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L E+ +I+ ++ P Sbjct: 99 EEHDFQTKLKNGRKFLEKGDKCKVSIRFRGRAITHKEIGQRVLEKFAEQCKDIATVEQRP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++LS Sbjct: 159 KMDGRQMFIMLSP 171 >gi|238650229|ref|YP_002916080.1| translation initiation factor IF-3 [Rickettsia peacockii str. Rustic] gi|238624327|gb|ACR47033.1| translation initiation factor IF-3 [Rickettsia peacockii str. Rustic] Length = 157 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 65/132 (49%), Positives = 89/132 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 20 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIIVLKEMKFKPNI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 80 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 139 Query: 121 KFEGRQMIMILS 132 K EG+QMIMI+S Sbjct: 140 KMEGKQMIMIVS 151 >gi|325287304|ref|YP_004263094.1| translation initiation factor IF-3 [Cellulophaga lytica DSM 7489] gi|324322758|gb|ADY30223.1| translation initiation factor IF-3 [Cellulophaga lytica DSM 7489] Length = 139 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDLVEI P VCKI+D +K Y +K + K +KE++ P Sbjct: 3 LAKAEELELDLVEISPKADPPVCKIIDYKKFLYEQKKREKVMKAKASKVVVKEIRFGPQT 62 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL+DG K+K V F+GR I+++D G LL + + E+ +++ P Sbjct: 63 DDHDYEFKKKHAEKFLKDGAKLKAYVFFKGRSIVYKDQGEILLLRLAQELEELGKVEQMP 122 Query: 121 KFEGRQMIMILSSKC 135 K EG++M M L+ K Sbjct: 123 KLEGKRMTMFLAPKT 137 >gi|296110553|ref|YP_003620934.1| translation initiation factor IF-3 [Leuconostoc kimchii IMSNU 11154] gi|295832084|gb|ADG39965.1| translation initiation factor IF-3 [Leuconostoc kimchii IMSNU 11154] Length = 143 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A ++N DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDSNQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQLKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|153835372|ref|ZP_01988039.1| translation initiation factor IF-3 [Vibrio harveyi HY01] gi|148868120|gb|EDL67284.1| translation initiation factor IF-3 [Vibrio harveyi HY01] Length = 166 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 37 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 96 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQD+G ++L +KE E + ++ P K EGRQ Sbjct: 97 KLRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLHRLKEDTVEFAVVESFPSKIEGRQ 156 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 157 MIMVLAPKK 165 >gi|59711823|ref|YP_204599.1| protein chain initiation factor IF-3 [Vibrio fischeri ES114] gi|59479924|gb|AAW85711.1| protein chain initiation factor IF-3 [Vibrio fischeri ES114] Length = 156 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA +DLVEI + P V +++D K + K A E +KKQK IKE+K RP Sbjct: 20 LDAALEAGVDLVEISPNAEPPVGRVMDYGKFLFEKAKAAKEQKKKQKQVQIKEIKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P Sbjct: 80 DVGDYQVKLRNLTGFLEDGNKVKVTIRFRGREMAHQNIGVDVLNRLKADTEEFAVVESFP 139 Query: 121 -KFEGRQMIMILSSKC 135 + EGRQMIM+L+ K Sbjct: 140 TRIEGRQMIMVLAPKK 155 >gi|302386672|ref|YP_003822494.1| translation initiation factor IF-3 [Clostridium saccharolyticum WM1] gi|302197300|gb|ADL04871.1| translation initiation factor IF-3 [Clostridium saccharolyticum WM1] Length = 164 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA+EA LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LQMAKEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E+ +I+ ID Sbjct: 90 DTNDLNTKMGAARKFLEKGDKVKVTLRFRGREMAHMSKSKYILDDFAEKLADIATIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|157414243|ref|YP_001485109.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9215] gi|254525365|ref|ZP_05137417.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9202] gi|166918493|sp|A8G7E2|IF3_PROM2 RecName: Full=Translation initiation factor IF-3 gi|157388818|gb|ABV51523.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT 9215] gi|221536789|gb|EEE39242.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9202] Length = 190 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIANQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLAETLLLKMASDLEEQSEVQQKP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRK 181 >gi|292572144|gb|ADE30059.1| Translation initiation factorI F-3 [Rickettsia prowazekii Rp22] Length = 168 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 32 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G EL I+ + +ID Sbjct: 92 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHA 151 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 152 KMEGKQMIMIVSP 164 >gi|300173542|ref|YP_003772708.1| translation initiation factor IF-3 [Leuconostoc gasicomitatum LMG 18811] gi|299887921|emb|CBL91889.1| Translation initiation factor IF-3 [Leuconostoc gasicomitatum LMG 18811] Length = 143 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A ++N DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDSNQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELNDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 128 MDGRQMFLVLAPR 140 >gi|78780114|ref|YP_398226.1| translation initiation factor IF-3 [Prochlorococcus marinus str. MIT 9312] gi|123768927|sp|Q318A5|IF3_PROM9 RecName: Full=Translation initiation factor IF-3 gi|78713613|gb|ABB50790.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus marinus str. MIT 9312] Length = 190 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 79/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+++D K ++ +K A EARKK T +KEVKMR I Sbjct: 47 LEIASQRELDLVLVSEKANPPVCRVMDYGKYKFEQEKKAKEARKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S I +P Sbjct: 107 DKHDYDVRIGQATKFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEIQQKP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|251792478|ref|YP_003007204.1| translation initiation factor IF-3 [Aggregatibacter aphrophilus NJ8700] gi|247533871|gb|ACS97117.1| translation initiation factor IF-3 [Aggregatibacter aphrophilus NJ8700] Length = 159 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 61/127 (48%), Positives = 82/127 (64%), Gaps = 1/127 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLVEI + P VC+I++ K Y K A E +KKQK +KE+K RP D D QVKL Sbjct: 32 DLVEISPNAEPPVCRIMNYGKFLYEKSKTAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKL 91 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMI 128 +++ FL DG K KI+++FRGRE+ HQ +G E+L IK EIS ++ P K EGRQM+ Sbjct: 92 RSLIRFLEDGDKAKITLRFRGREMAHQQIGTEMLERIKNDLAEISVVESAPGKLEGRQMV 151 Query: 129 MILSSKC 135 M+L+ K Sbjct: 152 MVLAPKK 158 >gi|86147529|ref|ZP_01065840.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio sp. MED222] gi|218709222|ref|YP_002416843.1| translation initiation factor IF-3 [Vibrio splendidus LGP32] gi|85834697|gb|EAQ52844.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio sp. MED222] gi|218322241|emb|CAV18359.1| Translation initiation factor IF-3 [Vibrio splendidus LGP32] Length = 156 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQEIGVDVLNRLKVDTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 147 MIMVLAPKK 155 >gi|88195487|ref|YP_500291.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|123098027|sp|Q2FXP9|IF3_STAA8 RecName: Full=Translation initiation factor IF-3 gi|87203045|gb|ABD30855.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 175 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 39 LKMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 99 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 158 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 159 KMDGRQMFIMLAP 171 >gi|88859309|ref|ZP_01133949.1| protein chain initiation factor IF-3 [Pseudoalteromonas tunicata D2] gi|88818326|gb|EAR28141.1| protein chain initiation factor IF-3 [Pseudoalteromonas tunicata D2] Length = 188 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 53 MAEEAGVDLVEISPNAEPPVCKLMDYGKFLFEKSKEQKEQKKKQKQIQIKEIKFRPGTDD 112 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D VKL+++ FL G K KI+V+FRGRE+ HQ++G LL+ IK ++S ++ P + Sbjct: 113 GDYNVKLRSLRKFLEAGDKAKITVRFRGREMAHQEIGITLLNRIKTDLEDVSSLESFPSR 172 Query: 122 FEGRQMIMILSS 133 EGRQM+M+L+ Sbjct: 173 VEGRQMVMMLAP 184 >gi|221134665|ref|ZP_03560968.1| translation initiation factor IF-3 [Glaciecola sp. HTCC2999] Length = 135 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA +LDLVEI + P VCK++D K + K E +KKQK +KE+K RP D Sbjct: 1 MADTNSLDLVEISPNAEPPVCKVMDYGKFLFEKSKALKEQKKKQKQIQVKEIKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K K+++++RGRE+ HQ++G ELL ++ +IS + P + Sbjct: 61 GDYQVKLRNLRRFLEAGDKAKVTIRYRGREMAHQEIGIELLKRVRADLEDISNCEAFPHR 120 Query: 122 FEGRQMIMILSS 133 EGRQMIM+L+ Sbjct: 121 VEGRQMIMVLAP 132 >gi|170016925|ref|YP_001727844.1| translation initiation factor 3 [Leuconostoc citreum KM20] gi|169803782|gb|ACA82400.1| Translation initiation factor 3 (IF-3) [Leuconostoc citreum KM20] Length = 143 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A + + DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QIANDLDQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLGQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|332292753|ref|YP_004431362.1| translation initiation factor IF-3 [Krokinobacter diaphorus 4H-3-7-5] gi|332170839|gb|AEE20094.1| translation initiation factor IF-3 [Krokinobacter diaphorus 4H-3-7-5] Length = 151 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 76/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 LAAELELDLVEISPNAAPPVCKIIDYKKFVYEQKKREKVMKAKASKVIIKEIRFGPQTDD 77 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL++G K+K V F+GR I+++D G LL + + E+ +++ P+ Sbjct: 78 HDYEFKKKHAEKFLKEGAKLKAYVFFKGRSIIYKDQGEILLLRLAQELEELGKVEQLPRL 137 Query: 123 EGRQMIMILSSKC 135 EG++M M ++ K Sbjct: 138 EGKRMTMFIAPKK 150 >gi|260777880|ref|ZP_05886773.1| translation initiation factor 3 [Vibrio coralliilyticus ATCC BAA-450] gi|260605893|gb|EEX32178.1| translation initiation factor 3 [Vibrio coralliilyticus ATCC BAA-450] Length = 154 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QV Sbjct: 25 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQV 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE +++ ++ P K EGRQ Sbjct: 85 KLRNLTRFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTVDLAVVESFPKKIEGRQ 144 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 145 MIMVLAPKK 153 >gi|15924670|ref|NP_372204.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50] gi|15927259|ref|NP_374792.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus N315] gi|156979998|ref|YP_001442257.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu3] gi|262052252|ref|ZP_06024457.1| translation initiation factor IF-3 infC [Staphylococcus aureus 930918-3] gi|13701477|dbj|BAB42771.1| translation initiation factor IF-3 infC [Staphylococcus aureus subsp. aureus N315] gi|14247452|dbj|BAB57842.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu50] gi|156722133|dbj|BAF78550.1| translation initiation factor IF-3 [Staphylococcus aureus subsp. aureus Mu3] gi|259159853|gb|EEW44892.1| translation initiation factor IF-3 infC [Staphylococcus aureus 930918-3] gi|285817364|gb|ADC37851.1| Translation initiation factor IF-3 [Staphylococcus aureus 04-02981] Length = 172 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ +LDLV + + P V +I+D K ++ QK E +KKQK +KE+++ P I Sbjct: 36 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q KLK FL G K K+S++FRGR I H+++G+ +L + +I+ ++ +P Sbjct: 96 EEHDFQTKLKNGRKFLTKGDKCKVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKP 155 Query: 121 KFEGRQMIMILSS 133 K +GRQM ++L+ Sbjct: 156 KMDGRQMFIMLAP 168 >gi|326693742|ref|ZP_08230747.1| translation initiation factor 3 [Leuconostoc argentinum KCTC 3773] Length = 143 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 84/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + + DLV + ++ P V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 EIANDLDQDLVLVQANAEPPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GR++L + +I++++ K Sbjct: 68 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGRQVLDRMAAELDDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|219117177|ref|XP_002179383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409274|gb|EEC49206.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 186 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEAN-LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + A+E LDL+ ++++ P VCKI+D K RY ++K A E +K K T IKEVKM Sbjct: 52 LAKAKEMGGLDLILVNNNSDPPVCKIVDYSKYRYQLEKKAKEVKKNSKGTEIKEVKMSYK 111 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 ID+HD V+ K+ FL+ G +VK +V FRGRE+ H +LG +LL+ + E + + Sbjct: 112 IDVHDYSVRKKSASKFLKQGNRVKCTVMFRGREVQHDNLGFDLLNRLASELEEYCMTESK 171 Query: 120 PKFEGRQMIMILSSK 134 PK EGR + +IL+ + Sbjct: 172 PKREGRNLSLILTPR 186 >gi|309805195|ref|ZP_07699247.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 09V1-c] gi|308165429|gb|EFO67660.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 09V1-c] Length = 135 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 77/125 (61%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + P V +I++ K R+ QK E RK QK T +KE+++ P I+ +D K Sbjct: 1 MDLVLISPNAKPPVARIMNYGKYRFEQQKKEKENRKNQKVTAVKEIRLSPTIEGNDFDTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LK + FL G KV++S++FRGR I H +LG+E+L + E+ ++S + P EGR M Sbjct: 61 LKHVRNFLAKGAKVRVSIRFRGRAITHNELGKEVLEKMAEQAKDLSSVTASPTMEGRSMF 120 Query: 129 MILSS 133 +ILS Sbjct: 121 LILSP 125 >gi|330719623|gb|EGG98193.1| Translation initiation factor 3 [gamma proteobacterium IMCC2047] Length = 129 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 76/125 (60%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI P VCK++D K + +K RKK + T +KE+K RP + D QVK Sbjct: 1 MDLVEIAPDAQPPVCKVMDYGKKLFDEKKQQAANRKKARQTQVKEIKFRPGTEEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G K K++ +FRGRE+ HQ++G EL+ + + E ++ +PK EGRQ+ Sbjct: 61 LRNLIRFLTHGDKTKVTCRFRGREMAHQEIGLELMLRVAKDLEEYGTVELQPKPEGRQIT 120 Query: 129 MILSS 133 M+L+ Sbjct: 121 MVLAP 125 >gi|228469291|ref|ZP_04054317.1| translation initiation factor IF-3 [Porphyromonas uenonis 60-3] gi|228309190|gb|EEK17792.1| translation initiation factor IF-3 [Porphyromonas uenonis 60-3] Length = 209 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ LDLVEI + P VC++ D +K Y +K E + KQ +KE++ P D Sbjct: 47 RIAELQGLDLVEISPNAEPPVCRVTDYQKFLYQQKKRQKEQKAKQAKVVVKEIRFGPQTD 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KL+ +GFL+DG KVK V FRGR I+ +D G LL E++R++ P Sbjct: 107 DHDYNFKLRHAEGFLKDGFKVKAYVFFRGRSILFKDQGEILLLRFANDLEELARVESMPV 166 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 167 LEGKRMTIMLAPKPA 181 >gi|256422753|ref|YP_003123406.1| translation initiation factor IF-3 [Chitinophaga pinensis DSM 2588] gi|256037661|gb|ACU61205.1| translation initiation factor IF-3 [Chitinophaga pinensis DSM 2588] Length = 239 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVEI + P VC+I+D K Y +K E + K + +KE++ P Sbjct: 59 LRMAEEQGLDLVEISPNAVPPVCRIIDYNKFLYEKKKKEKEMKAKAHKSEVKEIRFTPNT 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K K + FL+DG KVK V+F+GR IM ++ G +L ER E+ ++ P Sbjct: 119 DDHDFDFKAKHAEKFLKDGNKVKTYVQFKGRAIMFKERGELILLKFAERLAEVGALEGMP 178 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI I + K Sbjct: 179 TMEGKRMIAIFAPKSA 194 >gi|84393194|ref|ZP_00991957.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio splendidus 12B01] gi|84376160|gb|EAP93045.1| bacterial protein translation initiation factor 3 (IF-3) [Vibrio splendidus 12B01] Length = 156 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QV Sbjct: 27 GMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQV 86 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQ 126 KL+ + GFL DG KVK++++FRGRE+ HQ++G ++L+ +K E + ++ P + EGRQ Sbjct: 87 KLRNLTGFLEDGNKVKVTIRFRGREMAHQEIGVDVLNRLKIDTEEFAVVESFPTRIEGRQ 146 Query: 127 MIMILSSKC 135 MIM+L+ K Sbjct: 147 MIMVLAPKK 155 >gi|257471182|ref|ZP_05635181.1| translation initiation factor IF-3 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311085870|gb|ADP65952.1| translation initiation factor IF-3 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 129 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 60/128 (46%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K Y K++ E +KKQK IKE+K RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P K EGRQM Sbjct: 61 LRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFPSKIEGRQM 120 Query: 128 IMILSSKC 135 IMIL+ K Sbjct: 121 IMILAPKK 128 >gi|239947716|ref|ZP_04699469.1| translation initiation factor IF-3 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921992|gb|EER22016.1| translation initiation factor IF-3 [Rickettsia endosymbiont of Ixodes scapularis] Length = 148 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+D KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDRDKVKISLWFKGREILHKEVGQELFKRIEVGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG QMIMI+S Sbjct: 131 KMEGNQMIMIVSP 143 >gi|254780320|ref|YP_003064733.1| translation initiation factor IF-3 [Candidatus Liberibacter asiaticus str. psy62] gi|254039997|gb|ACT56793.1| translation initiation factor IF-3 [Candidatus Liberibacter asiaticus str. psy62] Length = 136 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 136/136 (100%), Positives = 136/136 (100%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI Sbjct: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP Sbjct: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 Query: 121 KFEGRQMIMILSSKCV 136 KFEGRQMIMILSSKCV Sbjct: 121 KFEGRQMIMILSSKCV 136 >gi|269966329|ref|ZP_06180416.1| initiation factor IF3 [Vibrio alginolyticus 40B] gi|269829068|gb|EEZ83315.1| initiation factor IF3 [Vibrio alginolyticus 40B] Length = 129 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|91793062|ref|YP_562713.1| initiation factor 3 [Shewanella denitrificans OS217] gi|91715064|gb|ABE54990.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella denitrificans OS217] Length = 128 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/127 (45%), Positives = 81/127 (63%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + K E +KKQK +KE+K RP D +D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTDENDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL DG K KI+++FRGRE+ HQ+LG +LL+ IK + ++ PK EGRQ I Sbjct: 61 LRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKADLEVYAVVESFPKMEGRQAI 120 Query: 129 MILSSKC 135 M+L+ K Sbjct: 121 MVLAPKK 127 >gi|89094704|ref|ZP_01167640.1| translation initiation factor IF-3 [Oceanospirillum sp. MED92] gi|89081050|gb|EAR60286.1| translation initiation factor IF-3 [Oceanospirillum sp. MED92] Length = 167 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLV+I P VCK++D K Y ++K EA+KKQ IKEVK RP Sbjct: 32 LEAAQEAGLDLVKIS-EADPIVCKVMDYGKHLYELKKQKNEAKKKQHQVQIKEVKFRPNT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K KI++++RGRE+ HQ+LG +LL I++ E+ ++ P Sbjct: 91 EEGDYQVKLRNLIRFLEAGDKAKITLRYRGREMAHQELGMQLLQRIEKELEEMITVEQRP 150 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M+++ K Sbjct: 151 KMEGRQLVMVIAPKK 165 >gi|307297789|ref|ZP_07577595.1| translation initiation factor IF-3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917049|gb|EFN47431.1| translation initiation factor IF-3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 175 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 81/136 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y K EA+KK K + +KE+K R I Sbjct: 24 LRIAREKGLDLVLVAPAANPPVARIMDYGKYKYEKDKRKKEAKKKTKQSQLKEMKFRIRI 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K I FL G KV++ + FRGREI+ D GRE+L + ++ +IS ID P Sbjct: 84 DEHDFQTKTNRIKEFLEKGSKVRVVIMFRGREIVFSDKGREILERVADQLQQISDIDRPP 143 Query: 121 KFEGRQMIMILSSKCV 136 K EGR M MIL K Sbjct: 144 KLEGRDMWMILKPKTT 159 >gi|116618538|ref|YP_818909.1| translation initiation factor 3 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097385|gb|ABJ62536.1| bacterial translation initiation factor 3 (bIF-3) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 143 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A +A++DLV + ++ V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 8 QLANDADMDLVLVQANAEVPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GRE+L + E +I++++ K Sbjct: 68 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGREVLDRMAEELNDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 128 MDGRQMFLVLAPR 140 >gi|118497780|ref|YP_898830.1| translation initiation factor IF-3 [Francisella tularensis subsp. novicida U112] gi|134301673|ref|YP_001121641.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis WY96-3418] gi|254374590|ref|ZP_04990071.1| hypothetical protein FTDG_00764 [Francisella novicida GA99-3548] gi|254874734|ref|ZP_05247444.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] gi|118423686|gb|ABK90076.1| translation initiation factor IF-3 [Francisella novicida U112] gi|134049450|gb|ABO46521.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis WY96-3418] gi|151572309|gb|EDN37963.1| hypothetical protein FTDG_00764 [Francisella novicida GA99-3548] gi|254840733|gb|EET19169.1| translation initiation factor IF-3 [Francisella tularensis subsp. tularensis MA00-2987] Length = 178 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 91/135 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 43 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 103 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 163 KLEGRQMIMVLGPKK 177 >gi|54113443|gb|AAV29355.1| NT02FT0733 [synthetic construct] Length = 155 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 20 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L + E ++ +P Sbjct: 80 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQP 139 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMI +L K Sbjct: 140 KLEGRQMIKVLGPKK 154 >gi|150016445|ref|YP_001308699.1| translation initiation factor IF-3 [Clostridium beijerinckii NCIMB 8052] gi|149902910|gb|ABR33743.1| translation initiation factor IF-3 [Clostridium beijerinckii NCIMB 8052] Length = 185 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 81/135 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E ++DLV + + P VC+I+D K Y K +A+KKQK IKEV+ I+ Sbjct: 51 KLAEEKDMDLVMMSPTAKPPVCRIMDYGKYVYEQSKKEKDAKKKQKIISIKEVRCSLTIE 110 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ +K K FL +G KVKI+V+FRGRE+ +G+++L N + ++ ++ PK Sbjct: 111 EHDIDIKAKNARKFLLEGDKVKITVRFRGREMELAHMGQKILDNFAAKLEDVCLVEKRPK 170 Query: 122 FEGRQMIMILSSKCV 136 EGR M M+L K Sbjct: 171 REGRNMTMVLGPKKA 185 >gi|160940543|ref|ZP_02087887.1| hypothetical protein CLOBOL_05438 [Clostridium bolteae ATCC BAA-613] gi|158436503|gb|EDP14270.1| hypothetical protein CLOBOL_05438 [Clostridium bolteae ATCC BAA-613] Length = 164 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MAQEA LDLV+I + P VCKI+D K RY + + EA+KKQK IKEV++ P I Sbjct: 30 LRMAQEAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + E +I+ ID Sbjct: 90 DTNDLNTKVGAARKFLEKGDKVKVTLRFRGREMAHMFKSKYILDDFAESLKDIAVIDKPS 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M+M L++K Sbjct: 150 KVEGRSMVMFLTAK 163 >gi|15606839|ref|NP_214219.1| initiation factor IF-3 [Aquifex aeolicus VF5] gi|6016323|sp|O67653|IF3_AQUAE RecName: Full=Translation initiation factor IF-3 gi|2984082|gb|AAC07621.1| initiation factor IF-3 [Aquifex aeolicus VF5] Length = 175 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 +++A+E LDLVEI P VCKI+D K +Y ++K EARKKQ +K+++M+ Sbjct: 37 LKIAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREARKKQREHQIEVKDIRMKV 96 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDLQVKLK + FL +G KVK+ ++FRGRE ++ +LG++L I +I+ ++ Sbjct: 97 RIDEHDLQVKLKHMREFLEEGDKVKVWLRFRGRENIYPELGKKLAERIINELSDIAEVEV 156 Query: 119 EPKFEGRQMIMILSSK 134 +PK EG MI +L+ K Sbjct: 157 QPKKEGNFMIFVLAPK 172 >gi|162452762|ref|YP_001615129.1| translation initiation factor IF-3 [Sorangium cellulosum 'So ce 56'] gi|189028357|sp|A9F8E5|IF3_SORC5 RecName: Full=Translation initiation factor IF-3 gi|161163344|emb|CAN94649.1| translation initiation factor IF-3 [Sorangium cellulosum 'So ce 56'] Length = 241 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 83/136 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE++ P VCKILD K +Y +K A EA++KQ IKE+K+RP Sbjct: 47 LRRAQEKGLDLVEVNPKADPPVCKILDFGKYKYDEKKKAREAKRKQSVVEIKEIKLRPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K +A FL G KVK +V+FRGREI H + +E L I + EI+ ++ P Sbjct: 107 DDHDLEFKTRAAHRFLGAGHKVKFTVRFRGREITHPEKAQEQLDWIVQHCEEIANVEVRP 166 Query: 121 KFEGRQMIMILSSKCV 136 E R M ++++ K Sbjct: 167 MMEQRTMTLMMAPKPA 182 >gi|90417312|ref|ZP_01225238.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2207] gi|90330897|gb|EAS46160.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2207] Length = 155 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDLVEI P VCKI+D K + I+K +KKQK T +KE+K RP Sbjct: 18 LEAAQKETLDLVEISPDAEPPVCKIMDYGKHVFDIKKKVALQKKKQKQTQVKEMKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ + FL +G K KIS++FRGRE+ HQ LG +++ I+ E+++++ P Sbjct: 78 DQGDYDIKLRNLVRFLENGDKAKISLRFRGREMAHQQLGMDMMKRIEADLAELAQVEQFP 137 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+LS + Sbjct: 138 KMEGRQMIMVLSPRS 152 >gi|332534270|ref|ZP_08410114.1| translation initiation factor 3 [Pseudoalteromonas haloplanktis ANT/505] gi|332036266|gb|EGI72738.1| translation initiation factor 3 [Pseudoalteromonas haloplanktis ANT/505] Length = 186 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VC+I+D K + K E +KKQK IKE+K RP D Sbjct: 51 MADAAGVDLVEISPNAEPPVCRIMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 111 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKADLEELAVVESFPNR 170 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 171 VEGRQMVMMMAP 182 >gi|325263822|ref|ZP_08130555.1| translation initiation factor IF-3 [Clostridium sp. D5] gi|324030860|gb|EGB92142.1| translation initiation factor IF-3 [Clostridium sp. D5] Length = 164 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV+I P VCKI+D K +Y + EA+KKQK+ +KEV++ P I Sbjct: 30 LKMAMDAELDLVKIAPMAKPPVCKIIDYGKYKYEQTRKDKEAKKKQKTVDLKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F+ G KVK++++FRGRE+ H R +L + + +I+ I+ Sbjct: 90 DTNDLNTKVNNAKKFIAKGNKVKVTLRFRGREMAHIQQSRHILDDFAKELLDIAVIEKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L+ K Sbjct: 150 KLEGRSMSMVLTEK 163 >gi|262394486|ref|YP_003286340.1| translation initiation factor 3 [Vibrio sp. Ex25] gi|262338080|gb|ACY51875.1| translation initiation factor 3 [Vibrio sp. Ex25] Length = 129 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E++ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAELAVVESFPKKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|227431923|ref|ZP_03913945.1| translation initiation factor IF3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352327|gb|EEJ42531.1| translation initiation factor IF3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 153 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A +A++DLV + ++ V KI+D K ++ QK E RK QK +KEV+M PVID Sbjct: 18 QLANDADMDLVLVQANAEVPVAKIMDWGKAKFEAQKKQKEQRKNQKIVQVKEVRMSPVID 77 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR I HQD+GRE+L + E +I++++ K Sbjct: 78 SGDFETRKKAAIKFLSQGNKVKLNLRFRGRMITHQDIGREVLDRMAEELNDIAKVEQRAK 137 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ + Sbjct: 138 MDGRQMFLVLAPR 150 >gi|149191775|ref|ZP_01870013.1| initiation factor IF3 [Vibrio shilonii AK1] gi|148834355|gb|EDL51354.1| initiation factor IF3 [Vibrio shilonii AK1] Length = 129 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 59/128 (46%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG KVK++++FRGRE+ HQD+G ++L+ +KE +++ ++ P + EGRQM Sbjct: 61 LRNLTRFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVDLAVVESFPTRIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|307721909|ref|YP_003893049.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas autotrophica DSM 16294] gi|306980002|gb|ADN10037.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas autotrophica DSM 16294] Length = 172 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 69/135 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E LDLV I + P V KI+D K +Y +K E RK Q +KE+K+ I Sbjct: 38 MTKANEMGLDLVLIAPNAKPPVAKIMDYGKFKYQEEKKLKEQRKNQVKIVVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + +E+L + +I+ ++ P Sbjct: 98 AENDIAYKVKHAREFLEKGFHVKFRVFLRGREMAHPEAAKEVLMQVWPMVEDIAVMEKPP 157 Query: 121 KFEGRQMIMILSSKC 135 KFEGR M + K Sbjct: 158 KFEGRYYNMYVVPKK 172 >gi|169634341|ref|YP_001708077.1| translation initiation factor IF-3 [Acinetobacter baumannii SDF] gi|169797156|ref|YP_001714949.1| translation initiation factor IF-3 [Acinetobacter baumannii AYE] gi|238688030|sp|B0V5P1|IF3_ACIBY RecName: Full=Translation initiation factor IF-3 gi|238688266|sp|B0VV99|IF3_ACIBS RecName: Full=Translation initiation factor IF-3 gi|169150083|emb|CAM87977.1| protein chain initiation factor IF-3 [Acinetobacter baumannii AYE] gi|169153133|emb|CAP02212.1| protein chain initiation factor IF-3 [Acinetobacter baumannii] Length = 183 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A+LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 47 LRAAEDADLDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E+ ++ P Sbjct: 107 DVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAELGVVEQAP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+L K Sbjct: 167 KMEGRQMGMLLGPKK 181 >gi|332297585|ref|YP_004439507.1| Translation initiation factor IF-3 [Treponema brennaborense DSM 12168] gi|332180688|gb|AEE16376.1| Translation initiation factor IF-3 [Treponema brennaborense DSM 12168] Length = 173 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLVE+ P VCKILD K R+ +K +++K QK +KE++M+P I Sbjct: 37 LKMAKERELDLVEVAPQANPPVCKILDYGKYRFEQEKKLRDSKKNQKLLKLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL K K + FL +G KVK++++FRGRE+ H +LG ++L + +R + ++ +P Sbjct: 97 GAGDLDFKSKHVQEFLAEGNKVKVTIRFRGRELAHTELGYDVLKEVLKRLDDEYVVEKQP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR M M LS K Sbjct: 157 AMEGRFMSMTLSPKA 171 >gi|323499330|ref|ZP_08104307.1| translation initiation factor 3 [Vibrio sinaloensis DSM 21326] gi|323315718|gb|EGA68752.1| translation initiation factor 3 [Vibrio sinaloensis DSM 21326] Length = 129 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL DG KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEDGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|33862192|ref|NP_893753.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931213|sp|Q7TU24|IF3_PROMP RecName: Full=Translation initiation factor IF-3 gi|33634410|emb|CAE20095.1| Translation Initiation factor 3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 190 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLV + P VC+I+D K ++ +K A E +KK T +KEVKMR I Sbjct: 47 LEIAHQRGLDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKETKKKSHQTEVKEVKMRYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V++ FL+ G KVK +V FRGREI H +L LL + E S + P Sbjct: 107 DKHDYDVRIGQAVRFLKSGDKVKCTVFFRGREIQHSNLAETLLLKMANDLEEQSEVQQRP 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR MIM LS + Sbjct: 167 KREGRNMIMFLSPRKT 182 >gi|86131541|ref|ZP_01050139.1| translation initiation factor IF-3 [Dokdonia donghaensis MED134] gi|85817986|gb|EAQ39154.1| translation initiation factor IF-3 [Dokdonia donghaensis MED134] Length = 151 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 76/133 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A E LDLVEI + P VCKI+D +K Y +K + K IKE++ P D Sbjct: 18 LASELELDLVEISPNAAPPVCKIIDYKKFVYEQKKREKIMKAKASKVIIKEIRFGPNTDD 77 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + K K + FL++G K+K V F+GR I+++D G LL + + E+ +++ P+ Sbjct: 78 HDYEFKKKHAEKFLKEGAKLKAYVFFKGRSIIYKDKGEILLLKLAQELEELGKVEQLPRL 137 Query: 123 EGRQMIMILSSKC 135 EG++M M ++ K Sbjct: 138 EGKRMTMFIAPKK 150 >gi|150024984|ref|YP_001295810.1| translation initiation factor IF-3 [Flavobacterium psychrophilum JIP02/86] gi|149771525|emb|CAL42994.1| Translation initiation factor IF-3 [Flavobacterium psychrophilum JIP02/86] Length = 137 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A + LDLVEI + P VCKI+D +K Y +K E + K +KE++ P Sbjct: 1 MKLADQLELDLVEISPNAEPPVCKIMDYKKFVYMQKKREKELKAKSTQIVVKEIRFGPQT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+++D G+ LL + E +++ P Sbjct: 61 DEHDYEFKRKNAEKFLKEGSKLKAFVFFKGRSIIYKDQGQILLLRLATDLEEHGKVEAMP 120 Query: 121 KFEGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 121 VLEGKRMIMFIAPKK 135 >gi|116515020|ref|YP_802649.1| hypothetical protein BCc_079 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256874|gb|ABJ90556.1| initiation factor IF-3 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 178 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ DLVEI + P VC+I++ K Y K + +KKQK IKEVK RP Sbjct: 43 LEEAKICGFDLVEISPNSKPPVCRIMNYGKFLYEKSKALKKQKKKQKIIQIKEVKFRPNT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL+ G KVKI+++FRGRE+ HQ++G +L ++ ++ I+ P Sbjct: 103 DKGDYQVKLRNLIRFLKCGNKVKITLRFRGREMAHQNIGINMLHRLEHDLSYLAIIESFP 162 Query: 121 K-FEGRQMIMILSSKC 135 K EGRQM MILS K Sbjct: 163 KRIEGRQMTMILSPKK 178 >gi|150389420|ref|YP_001319469.1| translation initiation factor IF-3 [Alkaliphilus metalliredigens QYMF] gi|149949282|gb|ABR47810.1| translation initiation factor IF-3 [Alkaliphilus metalliredigens QYMF] Length = 142 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 91/136 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A E NLDLV+I P VCKI+D K +Y + K EA+KKQK +KEV++ P I Sbjct: 7 LQIASEKNLDLVKISPQAKPPVCKIMDYGKFKYELAKKDKEAKKKQKVVTVKEVRLSPNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD++VK K FL G KVK++++FRGRE+ + + GR++++ K+ E+S ++ P Sbjct: 67 EAHDVEVKCKRALKFLESGDKVKVTLRFRGRELGNIEAGRKVINQFKDMLTEVSTVEKYP 126 Query: 121 KFEGRQMIMILSSKCV 136 K EGRQMIM+L+ K Sbjct: 127 KMEGRQMIMVLAPKNA 142 >gi|77360340|ref|YP_339915.1| translation initiation factor IF-3 [Pseudoalteromonas haloplanktis TAC125] gi|123589504|sp|Q3IL80|IF3_PSEHT RecName: Full=Translation initiation factor IF-3 gi|76875251|emb|CAI86472.1| protein chain initiation factor IF-3 [Pseudoalteromonas haloplanktis TAC125] Length = 181 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VC+I+D K + K E +KKQK IKE+K RP D Sbjct: 46 MADAAGVDLVEISPNAEPPVCRIMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 105 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 106 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKGDLEELAVVESFPNR 165 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 166 VEGRQMVMMMAP 177 >gi|325971718|ref|YP_004247909.1| translation initiation factor IF-3 [Spirochaeta sp. Buddy] gi|324026956|gb|ADY13715.1| Translation initiation factor IF-3 [Spirochaeta sp. Buddy] Length = 184 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 3/137 (2%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A+ LDLVE+ + P VCK+LD K RY +K +A+K Q +KE++M+P I+ Sbjct: 38 LAESVGLDLVEVSPNANPPVCKVLDFGKYRYEQEKRLRDAKKNQSVVKMKEIRMQPKIER 97 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR---IDCE 119 HDL+ K K I FL +G KVK+S++FRGRE+ H +LG+ +L I + E +D + Sbjct: 98 HDLETKSKFIGEFLAEGNKVKVSIRFRGRELAHTELGKVVLDKILAQLTENGVGFNLDRD 157 Query: 120 PKFEGRQMIMILSSKCV 136 EG+ M MI+S V Sbjct: 158 ALMEGKMMSMIVSPAKV 174 >gi|313887206|ref|ZP_07820902.1| translation initiation factor IF-3 [Porphyromonas asaccharolytica PR426713P-I] gi|332300494|ref|YP_004442415.1| Translation initiation factor IF-3 [Porphyromonas asaccharolytica DSM 20707] gi|312923435|gb|EFR34248.1| translation initiation factor IF-3 [Porphyromonas asaccharolytica PR426713P-I] gi|332177557|gb|AEE13247.1| Translation initiation factor IF-3 [Porphyromonas asaccharolytica DSM 20707] Length = 209 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 77/135 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+ LDLVEI + P VC++ + +K Y +K E + KQ +KE++ P D Sbjct: 47 RIAELQGLDLVEISPNAEPPVCRVTNYQKFLYQQKKRQKEQKAKQAKVVVKEIRFGPQTD 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD KL+ +GFL+DG KVK V FRGR I+ +D G LL +++R++ P Sbjct: 107 DHDYNFKLRHAEGFLKDGFKVKAYVFFRGRSILFKDQGEILLLRFANDLEDLARVESMPV 166 Query: 122 FEGRQMIMILSSKCV 136 EG++M ++L+ K Sbjct: 167 LEGKRMTIMLAPKPA 181 >gi|222099843|ref|YP_002534411.1| Translation initiation factor IF-3 [Thermotoga neapolitana DSM 4359] gi|221572233|gb|ACM23045.1| Translation initiation factor IF-3 [Thermotoga neapolitana DSM 4359] Length = 177 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLV + + P V +I+D K +Y + K E +K K+ +K++K R I Sbjct: 44 LDLAREKGLDLVLVAPNADPPVARIMDYGKYKYQLTKKQKENKK--KAVQLKQMKFRLKI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K++ I FL +G KV++ V F GRE+M D G+E+L + + +++ ++ P Sbjct: 102 DEHDYQTKVRHIRRFLEEGHKVRVVVMFIGREMMFTDKGKEILERVIKDTEDLAVVESPP 161 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 162 KVEGRDMWMVLKPK 175 >gi|150007316|ref|YP_001302059.1| translation initiation factor IF-3 [Parabacteroides distasonis ATCC 8503] gi|255014059|ref|ZP_05286185.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_7] gi|256839605|ref|ZP_05545114.1| translation initiation factor IF-3 [Parabacteroides sp. D13] gi|298375302|ref|ZP_06985259.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_19] gi|166198961|sp|A6L9S3|IF3_PARD8 RecName: Full=Translation initiation factor IF-3 gi|149935740|gb|ABR42437.1| translation initiation factor IF-3 [Parabacteroides distasonis ATCC 8503] gi|256738535|gb|EEU51860.1| translation initiation factor IF-3 [Parabacteroides sp. D13] gi|298267802|gb|EFI09458.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_19] Length = 208 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL + +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPKKA 174 >gi|218283436|ref|ZP_03489444.1| hypothetical protein EUBIFOR_02033 [Eubacterium biforme DSM 3989] gi|218215865|gb|EEC89403.1| hypothetical protein EUBIFOR_02033 [Eubacterium biforme DSM 3989] Length = 199 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + NLDL+ + P+VCK+LD + + QK A EA++KQ +K +++ P+I Sbjct: 64 LDIAYKQNLDLLCVAPKARPAVCKVLDYGRYHFEQQKKAKEAKRKQHVVEVKSLRLSPII 123 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ ++ G KVKI ++FRGR I ++GR+++++ E E++ ++ +P Sbjct: 124 DTHDFETKVRQTSKWIEAGMKVKIDMRFRGRLITRLEVGRKIMNDFIEAMSEVAIVEKKP 183 Query: 121 KFEGRQMIMILSSKC 135 EG M +L+ K Sbjct: 184 SMEGNTMSTVLAPKK 198 >gi|297569215|ref|YP_003690559.1| translation initiation factor IF-3 [Desulfurivibrio alkaliphilus AHT2] gi|296925130|gb|ADH85940.1| translation initiation factor IF-3 [Desulfurivibrio alkaliphilus AHT2] Length = 180 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E+ LDLVE+ + P VC+I+D K RY + K +A+KKQ +KE+K+RP Sbjct: 45 LMKAEESGLDLVEVSPTAKPPVCRIMDYGKYRYELSKKQQDAKKKQAVVEVKEIKLRPKT 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCE 119 + HDL K+K I FL KVK++++FRGREI++ D LG E+L+ I + E++ + Sbjct: 105 EKHDLDFKIKNIKKFLDQNNKVKVTLRFRGREIVYADTLGVEVLNRIAQELTEVATVLQA 164 Query: 120 PKFEGRQMIMILSS 133 PK EGRQM M++ Sbjct: 165 PKMEGRQMTMLVGP 178 >gi|224438524|ref|ZP_03659444.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] gi|313144951|ref|ZP_07807144.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] gi|313129982|gb|EFR47599.1| translation initiation factor IF-3 [Helicobacter cinaedi CCUG 18818] Length = 174 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 71/135 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLV I + P VCKI+D K RY +K EARKKQK IKE+K+ I Sbjct: 36 LNLANQAGLDLVLISPNAKPPVCKIMDYGKFRYQAEKKQKEARKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V + RE+ G + L + +I+ D EP Sbjct: 96 AQNDINYKVKHAIEFLESGKHVKFKVFLKQRELSIPQAGMDTLHKVAAMLEDIAVADKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EG+ + ++ K Sbjct: 156 KLEGKYLNVLYVPKK 170 >gi|120434968|ref|YP_860654.1| translation initiation factor IF-3 [Gramella forsetii KT0803] gi|117577118|emb|CAL65587.1| translation initiation factor IF-3 [Gramella forsetii KT0803] Length = 147 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 73/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLVEI + P V K +D +K Y +K + K +KE++ P Sbjct: 10 LSIAQELGLDLVEISPNAKPPVVKAMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL+DG K+K V F+GR I+ +D G LL + + E +++ P Sbjct: 70 DDHDYEFKKRNAEKFLKDGAKLKAFVFFKGRSIVFKDKGEILLLRLAQDLEEHGKVEQMP 129 Query: 121 KFEGRQMIMILSS 133 K EG++M M LS Sbjct: 130 KLEGKRMTMFLSP 142 >gi|67459152|ref|YP_246776.1| translation initiation factor IF-3 [Rickettsia felis URRWXCal2] gi|67004685|gb|AAY61611.1| Translation initiation factor IF-3 [Rickettsia felis URRWXCal2] Length = 147 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ A+LDLVEI + P VCKILD K +Y +K EARKKQK +KE+K +P I Sbjct: 11 LDMAERASLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGQELFKRIEVGLEGPIKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIVSP 143 >gi|82523877|emb|CAI78600.1| translation initiation factor IF-3 [uncultured delta proteobacterium] Length = 141 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E +D+VE+ ++ TP VCKI+D K +Y K EA+KKQ +KEVK+RP Sbjct: 7 LEKAGEIGVDIVEVAANATPPVCKIMDYGKFKYEQNKQQQEAKKKQTIIQVKEVKIRPKT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD Q K++ I+ FL D +VK+++ FRGREI + LG ++L I E + ID P Sbjct: 67 EEHDYQFKMRHIERFLADKNRVKVTIMFRGREIAYPQLGSKILDRIAEELKDQVNIDSHP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGR MIM +SSK Sbjct: 127 KMEGRNMIMYISSKT 141 >gi|328947928|ref|YP_004365265.1| Translation initiation factor IF-3 [Treponema succinifaciens DSM 2489] gi|328448252|gb|AEB13968.1| Translation initiation factor IF-3 [Treponema succinifaciens DSM 2489] Length = 176 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLVE+ + P VCKILD K ++ +K +++K QK +KE++M+P I Sbjct: 37 LRMAKDRDLDLVEVSPNANPPVCKILDFGKYKFEQEKKLRDSKKNQKVLKLKEIRMQPKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS-RIDCE 119 DL K K + FL +G KVK++++FRGRE+ H +LG ++L +++R E S I+ Sbjct: 97 GAGDLDTKAKHVQEFLNEGDKVKVTIRFRGRELAHTELGYDVLKEVEKRLVEGSYAIEKP 156 Query: 120 PKFEGRQMIMILSSKC 135 EGR M M L+SK Sbjct: 157 AAMEGRFMSMTLNSKV 172 >gi|169824392|ref|YP_001692003.1| translation initiation factor IF-3 [Finegoldia magna ATCC 29328] gi|167831197|dbj|BAG08113.1| translation initiation factor IF-3 [Finegoldia magna ATCC 29328] Length = 192 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 54 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 114 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 173 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 174 SMEGRMMIMFMGP 186 >gi|325662120|ref|ZP_08150738.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085917|ref|ZP_08335000.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471569|gb|EGC74789.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406840|gb|EGG86345.1| translation initiation factor IF-3 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 164 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A EA LDLV+I + P VCKI+D K +Y + + EA+KKQK+ +KEV++ P I Sbjct: 30 MKLAAEAELDLVKIAPTAKPPVCKIIDYGKYKYELTRKEKEAKKKQKTVDVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ F++ G KVK++++FRGRE+ H + +L + + +I+ ++ Sbjct: 90 DTNDLNTKVNNAKKFIQKGNKVKVTLRFRGREMAHMQTSKHILDDFADMLKDIAVVEKPT 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + M+L+ K Sbjct: 150 KLEGRSISMVLTEK 163 >gi|153839386|ref|ZP_01992053.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ3810] gi|260878404|ref|ZP_05890759.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AN-5034] gi|260896983|ref|ZP_05905479.1| translation initiation factor IF-3 [Vibrio parahaemolyticus Peru-466] gi|260901782|ref|ZP_05910177.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ4037] gi|149747081|gb|EDM58069.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ3810] gi|308087792|gb|EFO37487.1| translation initiation factor IF-3 [Vibrio parahaemolyticus Peru-466] gi|308091341|gb|EFO41036.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AN-5034] gi|308108050|gb|EFO45590.1| translation initiation factor IF-3 [Vibrio parahaemolyticus AQ4037] gi|328472988|gb|EGF43836.1| translation initiation factor 3 [Vibrio parahaemolyticus 10329] Length = 129 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 60/128 (46%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P + EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTAEIAVVEAFPSRIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|196233282|ref|ZP_03132127.1| translation initiation factor IF-3 [Chthoniobacter flavus Ellin428] gi|196222587|gb|EDY17112.1| translation initiation factor IF-3 [Chthoniobacter flavus Ellin428] Length = 185 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE+ +S P VC+I+D K +Y K+ E K+ S+ +KE+K R I Sbjct: 21 IRKAQEMGLDLVEVAASANPPVCRIVDFGKFKYEAAKHEKE--KRNVSSKLKEIKFRVNI 78 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ + FL G KV++ ++FRGRE+ HQ+LG +L++ +K ++ ++ EP Sbjct: 79 DEHDYETKMRHAEEFLDKGNKVRVQLQFRGREMAHQELGMQLMARVKTDLVTMAHVEMEP 138 Query: 121 KFEGRQMIMILSS 133 K G+ + M L+ Sbjct: 139 KLLGKSVTMTLAP 151 >gi|221066195|ref|ZP_03542300.1| translation initiation factor IF-3 [Comamonas testosteroni KF-1] gi|220711218|gb|EED66586.1| translation initiation factor IF-3 [Comamonas testosteroni KF-1] Length = 185 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL +G K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLAEGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMVAP 156 >gi|119487595|ref|ZP_01621205.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] gi|119455764|gb|EAW36900.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106] Length = 178 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLV + + P VC+ILD K +Y Q + E ++ + +KE+KMR I Sbjct: 44 LSIAQEKELDLVLVSDTANPPVCRILDYGKYKY-QQLKSKENNRQSSKSQLKELKMRYKI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V++ FL+ G VK +V RGRE +H L ++LL + E ++I P Sbjct: 103 EDHDYSVRVNHAKRFLKSGNPVKATVTMRGRENLHGGLAKDLLDRMATDLEEFAQIQQSP 162 Query: 121 KFEGRQMIMILSSKCV 136 K EG ++ M+L+ + Sbjct: 163 KREGSRITMLLTPRKA 178 >gi|295115131|emb|CBL35978.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SM4/1] Length = 164 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+EA LDLV+I + P VCKI+D K RY + EA+KKQK +KEV++ P ID Sbjct: 31 KLAREAELDLVKIAPTAKPPVCKIIDYGKFRYEQARKEKEAKKKQKVIEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ A F+ G KVKI+++FRGRE+ H + +L + E+ +I+ +D K Sbjct: 91 DNDLNTKVSAARKFIEKGNKVKITLRFRGREMAHMSKTKYILDDFAEKLSDIAVVDKPSK 150 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 151 VEGRSIVMFLTAK 163 >gi|157803732|ref|YP_001492281.1| translation initiation factor IF-3 [Rickettsia canadensis str. McKiel] gi|157784995|gb|ABV73496.1| translation initiation factor IF-3 [Rickettsia canadensis str. McKiel] Length = 147 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 87/133 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLVEI + P VCKILD K +Y +K EARKK K +KE+K +P I Sbjct: 11 LDMADKVGLDLVEISPNAEPPVCKILDFGKFKYESKKRLHEARKKHKIVVLKEMKFKPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D + KL+ I FL+DG KVKIS+ F+GREI+H+++G+EL I+ + +ID Sbjct: 71 SIGDFETKLRKIKEFLKDGNKVKISLWFKGREILHKEVGQELFKRIEIGLEGLVKIDQHA 130 Query: 121 KFEGRQMIMILSS 133 K EG+QMIMI+S Sbjct: 131 KMEGKQMIMIISP 143 >gi|269468319|gb|EEZ79995.1| translation initiation factor 3 [uncultured SUP05 cluster bacterium] gi|269468340|gb|EEZ80014.1| translation initiation factor 3, IF-3 [uncultured SUP05 cluster bacterium] Length = 136 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 86/133 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA++A LDLVE+ + P VCKI+D K Y +K + +KKQK T +K +K RP + Sbjct: 1 MAKDAGLDLVEVSPNAEPPVCKIMDFGKFLYEQKKQLSDQKKKQKKTQVKTIKYRPGTEE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D Q+K + + FL +G KVK+S+ FRGRE+ H++LG E+L I++ E + ++ + K Sbjct: 61 GDYQIKFRNLVKFLDNGDKVKVSIWFRGREMQHRELGMEMLDRIEKDTEEFANVEQKAKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 121 EGRQLGMMLAPKS 133 >gi|291277002|ref|YP_003516774.1| translation initiation factor IF-3 [Helicobacter mustelae 12198] gi|290964196|emb|CBG40042.1| translation initiation factor IF-3 [Helicobacter mustelae 12198] Length = 185 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 71/134 (52%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLV I + P VCK++D K RY ++K EARKKQK IKE+K+ I Sbjct: 37 KIANSKGLDLVLISPNANPPVCKVMDYGKYRYQLEKKQKEARKKQKQIEIKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F+ + VK V +GRE G E+L I +I+ + EP+ Sbjct: 97 QNDINYKVKHAREFIAEQKHVKFKVVLKGRETSDPQGGFEVLRRIAGMVEDIATPEKEPR 156 Query: 122 FEGRQMIMILSSKC 135 EGR +I + K Sbjct: 157 VEGRYVIWLFVPKK 170 >gi|218459867|ref|ZP_03499958.1| translation initiation factor IF-3 [Rhizobium etli Kim 5] Length = 122 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 90/122 (73%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 EI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP ID HD +VK+KA+ Sbjct: 1 EISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEVKMKAM 60 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 F +G KVK+++KFRGRE+ HQ+LG +LL +K EI++++ EPK EGRQM+M+L+ Sbjct: 61 GRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEPKLEGRQMMMVLA 120 Query: 133 SK 134 K Sbjct: 121 PK 122 >gi|86608017|ref|YP_476779.1| translation initiation factor IF-3 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556559|gb|ABD01516.1| translation initiation factor IF-3 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 185 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + P VC+I+D K ++ +K EARKKQ + IKEVK R I Sbjct: 49 LRLAEEKDLDLVLVSEKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V+L++ FL DG KVK +V FRGRE H +LG ELL + + E++ + P Sbjct: 109 GEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKDLQEVAEMQQPP 168 Query: 121 KFEGRQMIMILSSKC 135 + EGR + MILS K Sbjct: 169 QKEGRNITMILSPKK 183 >gi|262382111|ref|ZP_06075249.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_33B] gi|262297288|gb|EEY85218.1| translation initiation factor IF-3 [Bacteroides sp. 2_1_33B] Length = 208 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL + +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPKKA 174 >gi|303271103|ref|XP_003054913.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462887|gb|EEH60165.1| predicted protein [Micromonas pusilla CCMP1545] Length = 175 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRPV 59 ++A EA LDLV P VC+I++ K +Y +K E RK+ +KE+KMR Sbjct: 37 EIADEAGLDLVMFSPEANPPVCRIMNYSKYKYEQEKKQRETRKRAAATRIEVKELKMRYN 96 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRI 116 ID HD V+LKA FL G +VK+ +FRGRE +D+GR++ + ++ + Sbjct: 97 IDSHDYMVRLKAAKKFLDGGDRVKLVCQFRGRENEFRDMGRDMFMKFVDDCNSDEDLCTL 156 Query: 117 DCEPKFEGRQMIMILSS 133 + P EG +M+M+L Sbjct: 157 EGNPSMEGNRMVMVLGP 173 >gi|299533557|ref|ZP_07046933.1| translation initiation factor IF-3 [Comamonas testosteroni S44] gi|298718463|gb|EFI59444.1| translation initiation factor IF-3 [Comamonas testosteroni S44] Length = 185 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 24 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 84 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 143 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 144 KLEGRQMIMMVAP 156 >gi|259500520|ref|ZP_05743422.1| initiation factor IF3 [Lactobacillus iners DSM 13335] gi|302191210|ref|ZP_07267464.1| translation initiation factor IF-3 [Lactobacillus iners AB-1] gi|309803158|ref|ZP_07697255.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 11V1-d] gi|309807122|ref|ZP_07701099.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 03V1-b] gi|309808034|ref|ZP_07701953.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 01V1-a] gi|309810188|ref|ZP_07704033.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 2503V10-D] gi|312871792|ref|ZP_07731880.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 3008A-a] gi|312873026|ref|ZP_07733086.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2062A-h1] gi|312874179|ref|ZP_07734213.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2052A-d] gi|312875675|ref|ZP_07735676.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2053A-b] gi|315653645|ref|ZP_07906565.1| translation initiation factor IF3 [Lactobacillus iners ATCC 55195] gi|325912167|ref|ZP_08174565.1| translation initiation factor IF-3 [Lactobacillus iners UPII 143-D] gi|325912704|ref|ZP_08175087.1| translation initiation factor IF-3 [Lactobacillus iners UPII 60-B] gi|329920067|ref|ZP_08276898.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 1401G] gi|259167904|gb|EEW52399.1| initiation factor IF3 [Lactobacillus iners DSM 13335] gi|308164666|gb|EFO66916.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 11V1-d] gi|308166473|gb|EFO68675.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 03V1-b] gi|308168717|gb|EFO70816.1| translation initiation factor IF-3 [Lactobacillus iners LactinV 01V1-a] gi|308169460|gb|EFO71508.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 2503V10-D] gi|311088929|gb|EFQ47372.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2053A-b] gi|311090249|gb|EFQ48659.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2052A-d] gi|311091548|gb|EFQ49932.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 2062A-h1] gi|311092734|gb|EFQ51090.1| translation initiation factor IF-3 [Lactobacillus iners LEAF 3008A-a] gi|315489007|gb|EFU78649.1| translation initiation factor IF3 [Lactobacillus iners ATCC 55195] gi|325476117|gb|EGC79285.1| translation initiation factor IF-3 [Lactobacillus iners UPII 143-D] gi|325478125|gb|EGC81254.1| translation initiation factor IF-3 [Lactobacillus iners UPII 60-B] gi|328936521|gb|EGG32965.1| translation initiation factor IF-3 [Lactobacillus iners SPIN 1401G] Length = 134 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 77/125 (61%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + P V +I++ K R+ QK E RK QK T +KE+++ P I+ +D K Sbjct: 1 MDLVLISPNAKPPVARIMNYGKYRFEQQKKEKENRKNQKVTAVKEIRLSPTIEGNDFDTK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LK + FL G KV++S++FRGR I H +LG+E+L + E+ ++S + P EGR M Sbjct: 61 LKHVRNFLAKGAKVRVSIRFRGRAITHNELGKEVLEKMAEQAKDLSSVTASPTMEGRSMF 120 Query: 129 MILSS 133 +ILS Sbjct: 121 LILSP 125 >gi|50086066|ref|YP_047576.1| translation initiation factor IF-3 [Acinetobacter sp. ADP1] gi|61213106|sp|Q6F861|IF3_ACIAD RecName: Full=Translation initiation factor IF-3 gi|49532042|emb|CAG69754.1| protein chain initiation factor IF-3 [Acinetobacter sp. ADP1] Length = 183 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 87/135 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 47 LRAAEEVELDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E ++ P Sbjct: 107 DVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP 166 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+L K Sbjct: 167 KMEGRQMGMLLGPKK 181 >gi|301310684|ref|ZP_07216623.1| translation initiation factor IF-3 [Bacteroides sp. 20_3] gi|300832258|gb|EFK62889.1| translation initiation factor IF-3 [Bacteroides sp. 20_3] Length = 208 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 76/136 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLVEI + P VC+++D +K Y +K E + K +KE++ P Sbjct: 39 LKIAEEQGMDLVEISPNAAPPVCRVIDYQKFLYQQKKRQKEQKAKSVKVVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G KVK V F+GR I+ ++ G LL + +++ P Sbjct: 99 DDHDYNFKLKHAKGFLEEGSKVKAYVFFKGRSILFKEQGEVLLLRFANDLEDYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI++L+ K Sbjct: 159 VLEGKRMIIMLTPKKA 174 >gi|295135445|ref|YP_003586121.1| translation initiation factor IF-3 [Zunongwangia profunda SM-A87] gi|294983460|gb|ADF53925.1| translation initiation factor IF-3 [Zunongwangia profunda SM-A87] Length = 148 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 71/133 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI P V K +D +K Y +K + K +KE++ P Sbjct: 10 LAIAEDLGLDLVEISPDAKPPVVKAMDYKKFLYEQKKREKAMKAKASKVVVKEIRFGPNT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + + FL+DG K+K V F+GR I+ +D G LL + E +++ P Sbjct: 70 DDHDYEFKKRNAEKFLKDGAKLKAFVFFKGRSIVFKDKGEILLLRLATDLEEFGKVEQMP 129 Query: 121 KFEGRQMIMILSS 133 K EG++M M ++ Sbjct: 130 KLEGKRMTMFMAP 142 >gi|254369558|ref|ZP_04985569.1| hypothetical protein FTAG_01445 [Francisella tularensis subsp. holarctica FSC022] gi|157122512|gb|EDO66647.1| hypothetical protein FTAG_01445 [Francisella tularensis subsp. holarctica FSC022] Length = 178 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 92/135 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+EA++DLVE+ ++ P VC+++D K + K +A+K QK T +KEVK+RPV Sbjct: 43 LALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ + FL G KVK++++FRGRE+ H++LG E+L ++ E ++ +P Sbjct: 103 DVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQHMANDAAEYGVVEHQP 162 Query: 121 KFEGRQMIMILSSKC 135 K EGRQMIM+L K Sbjct: 163 KLEGRQMIMVLGPKK 177 >gi|302391180|ref|YP_003827000.1| bacterial translation initiation factor 3 (bIF-3) [Acetohalobium arabaticum DSM 5501] gi|302203257|gb|ADL11935.1| bacterial translation initiation factor 3 (bIF-3) [Acetohalobium arabaticum DSM 5501] Length = 174 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVE+ + P VC+ILD K +Y K A +A++ Q +KEV+M I Sbjct: 37 LDIAKDRGLDLVEVAPNAEPPVCRILDYGKYKYEQAKKAQKAKQNQNVMNVKEVQMSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD VK+ + FL++ KVK+ +KFRGREI H+DLG +L+ + ++++++ +P Sbjct: 97 EEHDFNVKVNMGERFLKNKDKVKVKIKFRGREITHKDLGYDLMEDYYSELEDLAKMETKP 156 Query: 121 KFEGRQMIMILSS 133 K EGR M+MIL+ Sbjct: 157 KMEGRNMLMILTP 169 >gi|260770314|ref|ZP_05879247.1| translation initiation factor 3 [Vibrio furnissii CIP 102972] gi|260615652|gb|EEX40838.1| translation initiation factor 3 [Vibrio furnissii CIP 102972] Length = 129 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K EGRQM Sbjct: 61 LRNLTSFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEFAVVESFPTKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|225013013|ref|ZP_03703429.1| initiation factor 3 [Flavobacteria bacterium MS024-2A] gi|225002829|gb|EEG40809.1| initiation factor 3 [Flavobacteria bacterium MS024-2A] Length = 152 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ LDLVEI + +P VCKIL+ +K Y +K + K +KE++ P Sbjct: 17 LVIAESLELDLVEISPNASPPVCKILEYKKFLYEQKKREKALKAKTSKIILKEIRFGPQT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ P Sbjct: 77 DEHDYEFKKKHAEKFLKEGAKLKAFVFFKGRSIVFKEQGQILLLRLAQDLEELGKVEQMP 136 Query: 121 KFEGRQMIMILSSKC 135 EG++M +++S K Sbjct: 137 ILEGKKMSILISPKK 151 >gi|300933423|ref|ZP_07148679.1| translation initiation factor IF-3 [Corynebacterium resistens DSM 45100] Length = 126 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 46/120 (38%), Positives = 66/120 (55%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 + + P V KI+D K +Y + A EARK Q+ T +KE K RP ID HD + K + Sbjct: 1 MAPNAKPPVAKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKNNVV 60 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL G KVK+++ FRGRE +LG LL + + E +++ K +GR M M+L Sbjct: 61 RFLEKGSKVKVTIMFRGREQSRPELGFRLLERLAQDVEEYGQVETRAKQDGRNMTMVLGP 120 >gi|315651590|ref|ZP_07904607.1| translation initiation factor IF3 [Eubacterium saburreum DSM 3986] gi|315486149|gb|EFU76514.1| translation initiation factor IF3 [Eubacterium saburreum DSM 3986] Length = 165 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 83/135 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A+EA LDLV I + P VCKI+D K RY + + EA+KKQK+ IKEV++ P ID Sbjct: 31 EKAEEAGLDLVLIAPTAKPPVCKIIDYGKFRYELARKDKEAKKKQKTIEIKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ + FL G KVK++++FRGRE+ + +L + E +++ ID K Sbjct: 91 TNDLNTKVGSARKFLEKGNKVKVTLRFRGREMARMFKSKYILDDFAEALSDVATIDKPSK 150 Query: 122 FEGRQMIMILSSKCV 136 EGR ++M LS+K Sbjct: 151 AEGRSLVMFLSAKKA 165 >gi|264679165|ref|YP_003279072.1| translation initiation factor IF-3 [Comamonas testosteroni CNB-2] gi|262209678|gb|ACY33776.1| translation initiation factor IF-3 [Comamonas testosteroni CNB-2] Length = 210 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 89/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E ++DLVEI ++ +P VC+++D K +Y QK A EA+ KQ IKEVK RP Sbjct: 49 LRMAGELDVDLVEIAANASPPVCRLMDYGKFKYQEQKKAAEAKAKQTVIEIKEVKFRPGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D +KL+ I FL DG K KI+++FRGREI HQ LG LL+ +++ + +++ P Sbjct: 109 DDGDYNIKLRNIRRFLADGDKCKITLRFRGREITHQQLGLNLLNRLRDDLADSIQVEQFP 168 Query: 121 KFEGRQMIMILSS 133 K EGRQMIM+++ Sbjct: 169 KLEGRQMIMMVAP 181 >gi|152989861|ref|YP_001355583.1| translation initiation factor IF-3 [Nitratiruptor sp. SB155-2] gi|166198959|sp|A6Q167|IF3_NITSB RecName: Full=Translation initiation factor IF-3 gi|151421722|dbj|BAF69226.1| translation initiation factor IF-3 [Nitratiruptor sp. SB155-2] Length = 177 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I + P VCKI+D K +Y +K EA+KKQ +KE+K+ I Sbjct: 38 LKIAEQKGLDLVLIAPNANPPVCKIMDYGKFKYQQEKKLKEAKKKQTKIEVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V RGRE+ H + G E+L I +I ++ +P Sbjct: 98 AQNDIDYKVKHAREFLEKGKHVKFRVFLRGREMAHPEAGVEVLEKIIPLIEDIGVVEKKP 157 Query: 121 KFEGRQMIMILSSKC 135 EGR + M++ K Sbjct: 158 HLEGRYVNMLVIPKK 172 >gi|87308766|ref|ZP_01090905.1| translation initiation factor [Blastopirellula marina DSM 3645] gi|87288477|gb|EAQ80372.1| translation initiation factor [Blastopirellula marina DSM 3645] Length = 154 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ LDLVE+ P VC+I+D K +Y K + KE+++RP Sbjct: 20 LNKARAVGLDLVEVAPLAAPPVCRIMDYGKYKYQQNKKQH--KSHSHHAKTKEIRLRPKT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL+ KV++S++FRGRE+ H D G ++ + E +++ P Sbjct: 78 GDHDIEFKVKQAITFLKHKDKVQVSIQFRGREMAHVDEGHRVMKQVIALLEEFGKVESTP 137 Query: 121 KFEGRQMIMILSSKC 135 K GR+M+ ++ K Sbjct: 138 KQMGRRMMCTIAPKT 152 >gi|323484404|ref|ZP_08089770.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14163] gi|323692415|ref|ZP_08106651.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14673] gi|323402182|gb|EGA94514.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14163] gi|323503555|gb|EGB19381.1| translation initiation factor IF-3 [Clostridium symbiosum WAL-14673] Length = 164 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++A LDLV+I + P VCKI+D K RY + + EA+KKQK +KEV++ P I Sbjct: 30 LKLAKDAELDLVKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKVIEVKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A F+ G KVK++++FRGRE+ H + +L + E+ +I+ +D Sbjct: 90 DDNDLNTKINAARKFIEKGNKVKVTLRFRGREMAHMFKSKYILDDFAEKLADIATVDKPA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR +++ L++K Sbjct: 150 KVEGRSIVLFLTAK 163 >gi|7387793|sp|Q9X1S6|IF3_THEMA RecName: Full=Translation initiation factor IF-3 Length = 172 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y + K E +K K +K++K R I Sbjct: 39 LELAREKGLDLVLVAPNENPPVARIMDYGKYKYQLTKKQKENKK--KPVQMKQMKFRLKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 97 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 156 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 157 KMEGRDMWMVLKPK 170 >gi|325283367|ref|YP_004255908.1| Translation initiation factor IF-3 [Deinococcus proteolyticus MRP] gi|324315176|gb|ADY26291.1| Translation initiation factor IF-3 [Deinococcus proteolyticus MRP] Length = 226 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 70/120 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLV + P VCK+LD + RY Q+N E RK+ +S +K +K R I Sbjct: 50 LRMAREKNLDLVMVSPQAVPPVCKLLDYGRFRYEQQQNEKENRKRARSQEVKSIKYRVKI 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL G KVK+++ FRGRE H +LG +L + E +I + +P Sbjct: 110 DDNDFKTKTNHVRRFLEAGHKVKVTIMFRGRERTHPELGERILVRVAETLQDIGAPESKP 169 >gi|300855256|ref|YP_003780240.1| putative translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] gi|300435371|gb|ADK15138.1| predicted translation initiation factor IF-3 [Clostridium ljungdahlii DSM 13528] Length = 170 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+E +DLV + P VCKI++ K Y K A +A+K QK +KEV++ I Sbjct: 36 LNMAREQGMDLVAVSPQAKPPVCKIMNYSKFLYEQSKKAKQAKKNQKIVELKEVRLSATI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D+++K FL G KVK+S++FRGR+ + LGR++ + E S ++ P Sbjct: 96 EENDIEIKANNARKFLAKGNKVKVSIRFRGRQNNYTSLGRKVFDTFLSKLDESSVVERAP 155 Query: 121 KFEGRQMIMILSSKC 135 K EG M MIL+ K Sbjct: 156 KLEGNNMFMILAPKK 170 >gi|226355497|ref|YP_002785237.1| translation initiation factor IF-3 [Deinococcus deserti VCD115] gi|259491504|sp|C1D0V9|IF3_DEIDV RecName: Full=Translation initiation factor IF-3 gi|226317487|gb|ACO45483.1| putative translation initiation factor IF-3 [Deinococcus deserti VCD115] Length = 210 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 68/120 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E LDLV + P VC++LD + RY Q+N E RK+ +S +K +K R I Sbjct: 38 MNMAREKGLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRVRSQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K + FL DG KVK+++ FRGRE H +LG +L + E ++ + P Sbjct: 98 DDHDFKTKTGHVRRFLDDGHKVKVTIMFRGRERTHPELGERILVRVAEALADVGTPEGMP 157 >gi|118602648|ref|YP_903863.1| translation initiation factor 3 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567587|gb|ABL02392.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 155 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 86/134 (64%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A +A LDLVE+ + P VCKI+D K Y +++ EA+KKQK +K +K RP + Sbjct: 19 QKATQAELDLVEVSPNAQPPVCKIMDFGKFLYELKQQKKEAKKKQKRNTVKTIKYRPGTE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D Q+K K + FL +G KVK+S+ FRGREI H++LG E+L I++ E + ++ + K Sbjct: 79 ESDYQIKFKNLVKFLDNGDKVKVSIWFRGREIQHKELGMEMLDRIEKDTEEFANVEQKAK 138 Query: 122 FEGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 139 LEGRQLGMMLAPKS 152 >gi|88803833|ref|ZP_01119356.1| translation initiation factor IF-3 [Polaribacter irgensii 23-P] gi|88780361|gb|EAR11543.1| translation initiation factor IF-3 [Polaribacter irgensii 23-P] Length = 152 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 75/134 (55%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA LDLVEI P VCKI+D +K Y +K + K +KE++ P D Sbjct: 17 EMAIAQELDLVEISPKAKPPVCKIIDYKKFLYEQKKREKSLKSKATKVIVKEIRFGPQTD 76 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K FL++G K+K V F+GR I+ ++ G+ LL + + E+ +++ PK Sbjct: 77 EHDYEFKKKHALKFLQEGAKLKAFVFFKGRSIIFKEQGQILLLKLAQELEEVGKVEQLPK 136 Query: 122 FEGRQMIMILSSKC 135 EG++MIM ++ K Sbjct: 137 LEGKRMIMFIAPKK 150 >gi|15902905|ref|NP_358455.1| translation initiation factor IF-3 [Streptococcus pneumoniae R6] gi|182683905|ref|YP_001835652.1| translation initiation factor IF-3 [Streptococcus pneumoniae CGSP14] gi|15458465|gb|AAK99665.1| Translation initiation factor IF-3 [Streptococcus pneumoniae R6] gi|182629239|gb|ACB90187.1| translation initiation factor IF-3 [Streptococcus pneumoniae CGSP14] Length = 195 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 60 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 119 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 120 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 179 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 180 DGRQMFMQLAP 190 >gi|193215697|ref|YP_001996896.1| translation initiation factor IF-3 [Chloroherpeton thalassium ATCC 35110] gi|193089174|gb|ACF14449.1| translation initiation factor IF-3 [Chloroherpeton thalassium ATCC 35110] Length = 222 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 74/133 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ+ LDL+EI + P VC+I+D K Y K E +KKQK++ +KEV+ P Sbjct: 40 LRQAQKEGLDLIEIQPNAKPPVCRIVDYGKFLYEQDKRDKEQKKKQKASSVKEVRFHPNT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K + FL+ G KV+ +V F GR I++ D G LL + ER +++ + Sbjct: 100 DTHDFDFKAAHAEEFLKKGDKVRATVVFLGRSIIYTDQGYALLERLSERLSSVAKPEGPA 159 Query: 121 KFEGRQMIMILSS 133 K EG+ + + + Sbjct: 160 KLEGKNLYVFYAP 172 >gi|148358549|ref|YP_001249756.1| translational initiation factor IF-3 [Legionella pneumophila str. Corby] gi|148280322|gb|ABQ54410.1| translational initiation factor IF-3 [Legionella pneumophila str. Corby] Length = 129 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 83/128 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I+D K + + K EA+KKQK +KE+K RP + D QVK Sbjct: 1 MDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEAKKKQKQIQVKELKFRPTTEDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++ Sbjct: 61 LRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLL 120 Query: 129 MILSSKCV 136 M+LS K Sbjct: 121 MVLSPKKT 128 >gi|315126514|ref|YP_004068517.1| translation initiation factor IF-3 [Pseudoalteromonas sp. SM9913] gi|315015028|gb|ADT68366.1| translation initiation factor IF-3 [Pseudoalteromonas sp. SM9913] Length = 189 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 54 MADAAGVDLVEISPNAEPPVCKVMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 113 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ IK E++ ++ P + Sbjct: 114 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRIKTDLEELAVVESFPNR 173 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 174 VEGRQMVMMMAP 185 >gi|86606784|ref|YP_475547.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab] gi|86555326|gb|ABD00284.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab] Length = 185 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +LDLV + P VC+I+D K ++ +K EARKKQ + IKEVK R I Sbjct: 49 LRLAEEKDLDLVLVSDKADPPVCRIMDYGKFKFEKEKKEREARKKQHTAEIKEVKFRYNI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V+L++ FL DG KVK +V FRGRE H +LG ELL + + ++ + P Sbjct: 109 GEHDYHVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLQRLFKDLEGVAEMQQPP 168 Query: 121 KFEGRQMIMILSSKC 135 + EGR + MILS K Sbjct: 169 QKEGRNITMILSPKK 183 >gi|262369845|ref|ZP_06063172.1| chain initiation factor IF-3 [Acinetobacter johnsonii SH046] gi|262314884|gb|EEY95924.1| chain initiation factor IF-3 [Acinetobacter johnsonii SH046] Length = 165 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI ++ P VCKI+D K + +++ EA+KKQ +KE+K+RP Sbjct: 29 LRAAESVELDLVEIVANAEPPVCKIMDFNKHLFDLKQKQKEAKKKQHQVQVKEIKLRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+AI FL +G KVKI+++FRGRE+ HQ LG L ++ ++ ++ P Sbjct: 89 DVGDYNVKLRAITKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKVEADVADLGVVEQAP 148 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+L K Sbjct: 149 KMEGRQMGMLLGPKK 163 >gi|182416356|ref|YP_001821422.1| translation initiation factor IF-3 [Opitutus terrae PB90-1] gi|177843570|gb|ACB77822.1| translation initiation factor IF-3 [Opitutus terrae PB90-1] Length = 221 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVE+ + TP VC+I+D K Y QK + K ++ IKE++ I Sbjct: 57 INLALENGLDLVEVAPNATPPVCRIMDFGKYVYEEQKKHTHS--KSTASKIKEIEFSARI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D KL+ + FL G KVK+ +KFRGRE+ H ++G ++ + D +P Sbjct: 115 AENDFFTKLRHAEQFLSHGNKVKLRLKFRGREMAHTEIGFNVMKRAVIELAGMGHPDADP 174 Query: 121 KFEGRQMIMILSS 133 K GR + ++LS Sbjct: 175 KLIGRNIHVMLSP 187 >gi|255320852|ref|ZP_05362026.1| translation initiation factor IF-3 [Acinetobacter radioresistens SK82] gi|262380255|ref|ZP_06073410.1| translation initiation factor IF-3 [Acinetobacter radioresistens SH164] gi|255302021|gb|EET81264.1| translation initiation factor IF-3 [Acinetobacter radioresistens SK82] gi|262298449|gb|EEY86363.1| translation initiation factor IF-3 [Acinetobacter radioresistens SH164] Length = 137 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 63/135 (46%), Positives = 90/135 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E++LDLVEI ++ P VCKI+D K + +++ +A+KKQ +KE+K+RP Sbjct: 1 MRAAEESDLDLVEIVANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPAT 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ EI ++ P Sbjct: 61 DVGDYQVKLRAIIKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAEIGVVEQAP 120 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+L K Sbjct: 121 KMEGRQMGMLLGPKK 135 >gi|281412638|ref|YP_003346717.1| translation initiation factor IF-3 [Thermotoga naphthophila RKU-10] gi|281373741|gb|ADA67303.1| translation initiation factor IF-3 [Thermotoga naphthophila RKU-10] Length = 170 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y + K E +K K +K++K R I Sbjct: 37 LELAREKGLDLVLVAPNENPPVARIMDYGKYKYQLTKKQKENKK--KPVQMKQMKFRLKI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 95 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 154 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 155 KMEGRDMWMVLKPK 168 >gi|262374877|ref|ZP_06068111.1| translation initiation factor IF-3 [Acinetobacter lwoffii SH145] gi|262309890|gb|EEY91019.1| translation initiation factor IF-3 [Acinetobacter lwoffii SH145] Length = 165 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI ++ P VCKI+D K + +++ EA+KKQ +KE+K+RP Sbjct: 29 LRAAESVELDLVEIVANAEPPVCKIMDFNKHLFDLKQKQKEAKKKQHQVQVKEIKLRPGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ E ++ P Sbjct: 89 DVGDYNVKLRAIIKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAEFGTVEQMP 148 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+L K Sbjct: 149 KMEGRQMGMLLGPKK 163 >gi|150020815|ref|YP_001306169.1| translation initiation factor IF-3 [Thermosipho melanesiensis BI429] gi|149793336|gb|ABR30784.1| translation initiation factor IF-3 [Thermosipho melanesiensis BI429] Length = 141 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + + P V KI+D K +Y + K +A+K QK +K++K R I Sbjct: 7 LELAYSQKLDLILVAPNAKPPVAKIMDYGKYKYELSKKEKKAKKNQKIIEVKQMKFRIKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I F+ G KV++ + FRGRE+ D G+E+L IKE +I+ ++ +P Sbjct: 67 DEHDYQTKVKHIKRFIESGNKVRVVIMFRGRELAFADKGKEILDRIKEDLRDIAVVEKQP 126 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 127 KLEGRDMWMMLKPK 140 >gi|15601864|ref|NP_232684.1| initiation factor IF3 [Vibrio cholerae O1 biovar eltor str. N16961] gi|121730171|ref|ZP_01682565.1| initiation factor IF3 [Vibrio cholerae V52] gi|147672230|ref|YP_001215777.1| initiation factor IF3 [Vibrio cholerae O395] gi|153803274|ref|ZP_01957860.1| initiation factor IF3 [Vibrio cholerae MZO-3] gi|227811911|ref|YP_002811921.1| initiation factor IF3 [Vibrio cholerae M66-2] gi|229506558|ref|ZP_04396067.1| translation initiation factor 3 [Vibrio cholerae BX 330286] gi|229510646|ref|ZP_04400126.1| translation initiation factor 3 [Vibrio cholerae B33] gi|229514760|ref|ZP_04404221.1| translation initiation factor 3 [Vibrio cholerae TMA 21] gi|229517223|ref|ZP_04406668.1| translation initiation factor 3 [Vibrio cholerae RC9] gi|229522961|ref|ZP_04412375.1| translation initiation factor 3 [Vibrio cholerae TM 11079-80] gi|229526101|ref|ZP_04415505.1| translation initiation factor 3 [Vibrio cholerae bv. albensis VL426] gi|229527752|ref|ZP_04417143.1| translation initiation factor 3 [Vibrio cholerae 12129(1)] gi|229606037|ref|YP_002876741.1| translation initiation factor 3 [Vibrio cholerae MJ-1236] gi|254284960|ref|ZP_04959926.1| initiation factor IF3 [Vibrio cholerae AM-19226] gi|254850513|ref|ZP_05239863.1| translation initiation factor IF-3 [Vibrio cholerae MO10] gi|255745913|ref|ZP_05419860.1| translation initiation factor 3 [Vibrio cholera CIRS 101] gi|261212791|ref|ZP_05927075.1| translation initiation factor 3 [Vibrio sp. RC341] gi|262163530|ref|ZP_06031276.1| translation initiation factor 3 [Vibrio cholerae INDRE 91/1] gi|262168211|ref|ZP_06035909.1| translation initiation factor 3 [Vibrio cholerae RC27] gi|297579609|ref|ZP_06941536.1| initiation factor IF3 [Vibrio cholerae RC385] gi|298500134|ref|ZP_07009940.1| translation initiation factor IF-3 [Vibrio cholerae MAK 757] gi|121628090|gb|EAX60630.1| initiation factor IF3 [Vibrio cholerae V52] gi|124121214|gb|EAY39957.1| initiation factor IF3 [Vibrio cholerae MZO-3] gi|146314613|gb|ABQ19153.1| initiation factor IF3 [Vibrio cholerae O395] gi|150424963|gb|EDN16740.1| initiation factor IF3 [Vibrio cholerae AM-19226] gi|227011053|gb|ACP07264.1| initiation factor IF3 [Vibrio cholerae M66-2] gi|227014956|gb|ACP11165.1| initiation factor IF3 [Vibrio cholerae O395] gi|229334114|gb|EEN99599.1| translation initiation factor 3 [Vibrio cholerae 12129(1)] gi|229336259|gb|EEO01277.1| translation initiation factor 3 [Vibrio cholerae bv. albensis VL426] gi|229340178|gb|EEO05186.1| translation initiation factor 3 [Vibrio cholerae TM 11079-80] gi|229345259|gb|EEO10232.1| translation initiation factor 3 [Vibrio cholerae RC9] gi|229348740|gb|EEO13698.1| translation initiation factor 3 [Vibrio cholerae TMA 21] gi|229353091|gb|EEO18031.1| translation initiation factor 3 [Vibrio cholerae B33] gi|229356909|gb|EEO21827.1| translation initiation factor 3 [Vibrio cholerae BX 330286] gi|229372523|gb|ACQ62945.1| translation initiation factor 3 [Vibrio cholerae MJ-1236] gi|254846218|gb|EET24632.1| translation initiation factor IF-3 [Vibrio cholerae MO10] gi|255735667|gb|EET91065.1| translation initiation factor 3 [Vibrio cholera CIRS 101] gi|260837856|gb|EEX64533.1| translation initiation factor 3 [Vibrio sp. RC341] gi|262023454|gb|EEY42157.1| translation initiation factor 3 [Vibrio cholerae RC27] gi|262028097|gb|EEY46756.1| translation initiation factor 3 [Vibrio cholerae INDRE 91/1] gi|297535255|gb|EFH74089.1| initiation factor IF3 [Vibrio cholerae RC385] gi|297542115|gb|EFH78166.1| translation initiation factor IF-3 [Vibrio cholerae MAK 757] Length = 129 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDVGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K E RQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTKIEARQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|54309338|ref|YP_130358.1| putative initiation factor IF3 [Photobacterium profundum SS9] gi|90410626|ref|ZP_01218642.1| putative initiation factor [Photobacterium profundum 3TCK] gi|46913774|emb|CAG20556.1| putative initiation factor IF3 [Photobacterium profundum SS9] gi|90328867|gb|EAS45151.1| putative initiation factor [Photobacterium profundum 3TCK] Length = 129 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKYLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDEGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G K K++++FRGRE+ HQ+LG +LL+ IK +++ + P + EGRQM Sbjct: 61 LRNLIRFLEEGNKGKVTLRFRGREMAHQNLGIDLLNRIKAELEDLAVCESFPHRVEGRQM 120 Query: 128 IMILSSKC 135 M+L+ K Sbjct: 121 TMMLAPKK 128 >gi|258623265|ref|ZP_05718272.1| initiation factor IF3 [Vibrio mimicus VM573] gi|258625494|ref|ZP_05720386.1| initiation factor IF3 [Vibrio mimicus VM603] gi|262164340|ref|ZP_06032078.1| translation initiation factor 3 [Vibrio mimicus VM223] gi|262173543|ref|ZP_06041220.1| translation initiation factor 3 [Vibrio mimicus MB-451] gi|262403447|ref|ZP_06080005.1| translation initiation factor 3 [Vibrio sp. RC586] gi|258582200|gb|EEW07057.1| initiation factor IF3 [Vibrio mimicus VM603] gi|258584451|gb|EEW09193.1| initiation factor IF3 [Vibrio mimicus VM573] gi|261890901|gb|EEY36888.1| translation initiation factor 3 [Vibrio mimicus MB-451] gi|262026720|gb|EEY45387.1| translation initiation factor 3 [Vibrio mimicus VM223] gi|262349951|gb|EEY99086.1| translation initiation factor 3 [Vibrio sp. RC586] Length = 129 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K E RQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTKIEARQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|332968644|gb|EGK07697.1| translation initiation factor IF3 [Psychrobacter sp. 1501(2011)] Length = 167 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 65/132 (49%), Positives = 88/132 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ P VCKI+D ++ Y ++ A EA+K QK T +KE+K+RP D Sbjct: 32 KAARDDNLDLVELVPDAKPPVCKIMDYKRYLYDQKQKAKEAKKNQKQTQLKEMKLRPSTD 91 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ I FL D KVK++++FRGRE+ HQDLGR+ L I E EIS ++ PK Sbjct: 92 EADYQVKLRKIISFLEDQDKVKVTIRFRGREMAHQDLGRQQLERIIEDTAEISNVEQHPK 151 Query: 122 FEGRQMIMILSS 133 EGRQM M+L Sbjct: 152 MEGRQMGMLLGP 163 >gi|229827027|ref|ZP_04453096.1| hypothetical protein GCWU000182_02411 [Abiotrophia defectiva ATCC 49176] gi|229788645|gb|EEP24759.1| hypothetical protein GCWU000182_02411 [Abiotrophia defectiva ATCC 49176] Length = 164 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 86/135 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA EA LDLV+I + P VCKI+D RK RY K EA+KKQK T +KE+++ P I Sbjct: 30 MKMAIEAELDLVKIAPTAKPPVCKIIDYRKYRYEQAKREKEAKKKQKVTEVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K FL G KVK++++FRGRE+ H +++L E+ G+I+ ++ + Sbjct: 90 DDNDLNTKANQAKKFLDKGDKVKVTLRFRGREMAHISSNKQILDVFLEKLGDIASVEKQA 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+++ K Sbjct: 150 KLEGRSMSMVVTGKK 164 >gi|331001967|ref|ZP_08325487.1| translation initiation factor IF-3 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411763|gb|EGG91168.1| translation initiation factor IF-3 [Lachnospiraceae oral taxon 107 str. F0167] Length = 165 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 83/135 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A+EA LDLV I + P VCKI+D K RY I + EA+KKQK+ IKEV++ P ID Sbjct: 31 EKAEEAGLDLVLIAPTAKPPVCKIIDYGKFRYEIARKDKEAKKKQKTIEIKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ + FL G KVK++++FRGRE+ + +L + E E++ ID K Sbjct: 91 TNDLNTKVSSARKFLEKGNKVKVTLRFRGREMARMFKSKYILDDFAEALSEVATIDKPSK 150 Query: 122 FEGRQMIMILSSKCV 136 EGR ++M LS+K Sbjct: 151 AEGRSLVMFLSAKKA 165 >gi|312866032|ref|ZP_07726253.1| translation initiation factor IF-3 [Streptococcus downei F0415] gi|311098436|gb|EFQ56659.1| translation initiation factor IF-3 [Streptococcus downei F0415] Length = 162 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 83/130 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A +AN+DLV I TP V KI+D K ++ QK E RKKQ + +KE+++ PVID Sbjct: 20 ADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSTVTVKEIRLSPVIDKG 79 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D + KL+ FL+ G KVK+S++FRGR I H+D+G ++L++ E +I+ I+ K + Sbjct: 80 DFETKLRNGRKFLQKGNKVKVSIRFRGRMITHKDIGAQVLADFAEATQDIAIIEQRAKMD 139 Query: 124 GRQMIMILSS 133 GRQM M L+ Sbjct: 140 GRQMFMQLAP 149 >gi|119472428|ref|ZP_01614546.1| translation initiation factor IF-3 [Alteromonadales bacterium TW-7] gi|119444950|gb|EAW26248.1| translation initiation factor IF-3 [Alteromonadales bacterium TW-7] Length = 186 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA A +DLVEI + P VCK++D K + K E +KKQK IKE+K RP D Sbjct: 51 MADAAGVDLVEISPNAEPPVCKVMDYGKFIFEKSKELKEQKKKQKQIQIKEIKFRPGTDE 110 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL G K KI+++FRGRE+ HQ++G ELL+ +K +++ ++ P + Sbjct: 111 GDYQVKLRNLRKFLEAGDKAKITIRFRGREMAHQEIGIELLNRVKGDLEDLAVVESFPNR 170 Query: 122 FEGRQMIMILSS 133 EGRQM+M+++ Sbjct: 171 VEGRQMVMMMAP 182 >gi|218134265|ref|ZP_03463069.1| hypothetical protein BACPEC_02158 [Bacteroides pectinophilus ATCC 43243] gi|217991640|gb|EEC57646.1| hypothetical protein BACPEC_02158 [Bacteroides pectinophilus ATCC 43243] Length = 164 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +DLV+ + P VCK+++ K +Y K EA+KKQK IKEV++ P I Sbjct: 30 LKIAKEQGVDLVKFVPNANPPVCKLVNYSKFKYEQAKREKEAKKKQKVVEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G +VK++++FRGRE+ H + + +L ++ +++ ++ P Sbjct: 90 DANDLNTKISAARKFLEKGNRVKVTLRFRGREMAHVEASKHILIEFAQKLEDVAVVEKLP 149 Query: 121 KFEGRQMIMILSSK 134 K EGR M M L+ K Sbjct: 150 KLEGRSMTMFLTEK 163 >gi|149276634|ref|ZP_01882777.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] gi|149232303|gb|EDM37679.1| translation initiation factor IF-3 [Pedobacter sp. BAL39] Length = 189 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLVEI + P VC+I+D K Y +K E + K K T IK+++ P Sbjct: 52 LELAEEQALDLVEISPNAVPPVCRIIDYSKFLYEQKKKQKEIKAKAKQTIIKDIRFGPNT 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK FL+ G KV+ V F+GR I++++ G LL + E +++ P Sbjct: 112 DDHDFQFKLKHATAFLQAGEKVRAYVHFKGRAIVYKERGEILLLKFAQALEEFGKVELFP 171 Query: 121 KFEGRQMIMILSSKCV 136 K EG++M + L K Sbjct: 172 KLEGKRMFLTLGPKAA 187 >gi|254508868|ref|ZP_05120977.1| translation initiation factor IF-3 [Vibrio parahaemolyticus 16] gi|323493466|ref|ZP_08098588.1| translation initiation factor 3 [Vibrio brasiliensis LMG 20546] gi|219548182|gb|EED25198.1| translation initiation factor IF-3 [Vibrio parahaemolyticus 16] gi|323312289|gb|EGA65431.1| translation initiation factor 3 [Vibrio brasiliensis LMG 20546] Length = 129 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE EI+ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTVEIAVVESFPKKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|15644338|ref|NP_229390.1| translation initiation factor IF-3 [Thermotoga maritima MSB8] gi|170289042|ref|YP_001739280.1| initiation factor 3 [Thermotoga sp. RQ2] gi|4982161|gb|AAD36657.1|AE001804_1 translation initiation factor IF-3 [Thermotoga maritima MSB8] gi|170176545|gb|ACB09597.1| initiation factor 3 [Thermotoga sp. RQ2] Length = 144 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V +I+D K +Y + K E +K K +K++K R I Sbjct: 11 LELAREKGLDLVLVAPNENPPVARIMDYGKYKYQLTKKQKENKK--KPVQMKQMKFRLKI 68 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL DG KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 69 DEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLATVESPP 128 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 129 KMEGRDMWMVLKPK 142 >gi|307244251|ref|ZP_07526366.1| translation initiation factor IF-3 [Peptostreptococcus stomatis DSM 17678] gi|306492401|gb|EFM64439.1| translation initiation factor IF-3 [Peptostreptococcus stomatis DSM 17678] Length = 152 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A NLDL I + P VCKI+D K +Y + EA+KKQK +KEV++RP I Sbjct: 19 ELASSKNLDLAMISPNAKPPVCKIMDYGKYKYEQARKEKEAKKKQKVINVKEVRLRPGIG 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ + E + PK Sbjct: 79 DHDLNTKANQAAKFLQKGDKVKVELRFRGRELGHKDIGKEVMLKFIDLLSEFGEPNKAPK 138 Query: 122 FEGRQMIMILSSKC 135 FEG M+ I+ K Sbjct: 139 FEGNNMVAIIDPKK 152 >gi|299117169|emb|CBN75133.1| conserved unknown protein [Ectocarpus siliculosus] Length = 288 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A + LDLV I P V KI+D K +Y + + + K K+T +KEVKM I Sbjct: 153 LQRASDEGLDLVMITKDAQPPVVKIIDYGKFKYKRDRRKKDNKAKHKATEMKEVKMSYKI 212 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD V+L+ F++ G +V+I V FRGRE H DLG LL + ++ ++ Sbjct: 213 ETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALVE-PK 271 Query: 121 KFEGRQMIMILSSKCV 136 + EG ++ MI+ K Sbjct: 272 RREGNRLSMIVFPKPT 287 >gi|88800312|ref|ZP_01115878.1| translation initiation factor IF-3 [Reinekea sp. MED297] gi|88776889|gb|EAR08098.1| translation initiation factor IF-3 [Reinekea sp. MED297] Length = 153 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 87/133 (65%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLV+I + P V KI+DL K Y +K A+KKQ +KEVK RP Sbjct: 18 IEKAQEAGLDLVQIS-NADPVVAKIMDLGKKLYEEKKAKAAAKKKQSQVQVKEVKFRPNT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D VKL+ + FL +G K K++++FRGRE+ HQ+LG ELL ++ +I++++ P Sbjct: 77 DIGDYNVKLRNLSRFLEEGNKAKVTLRFRGREMAHQELGMELLKRVETDLEDIAQVELRP 136 Query: 121 KFEGRQMIMILSS 133 K EGRQ+ M+L+ Sbjct: 137 KMEGRQLTMVLAP 149 >gi|255280783|ref|ZP_05345338.1| translation initiation factor IF-3 [Bryantella formatexigens DSM 14469] gi|255268720|gb|EET61925.1| translation initiation factor IF-3 [Bryantella formatexigens DSM 14469] Length = 164 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 85/134 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M++A+EA LDLV++ P VCKI+D K RY + + EA+KKQK+ IKEV++ P I Sbjct: 30 MKLAREAELDLVKVAPMAKPPVCKIIDYGKYRYEMARKEKEAKKKQKTIEIKEVRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+ A FL G KVK++++FRGRE+ H + +L + + +I+ +D Sbjct: 90 DANDLNTKIGAARKFLSKGNKVKVTLRFRGREMAHMQSSKHILDDFAKELEDIASVDKAA 149 Query: 121 KFEGRQMIMILSSK 134 K EGR + MIL+ K Sbjct: 150 KVEGRSLTMILTEK 163 >gi|33519812|ref|NP_878644.1| translation initiation factor IF-3 [Candidatus Blochmannia floridanus] gi|39931240|sp|Q7VR70|IF3_BLOFL RecName: Full=Translation initiation factor IF-3 gi|33504157|emb|CAD83419.1| translation initiation factor IF-3 [Candidatus Blochmannia floridanus] Length = 175 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++ LDLVEI + P VCKI++ K Y K+ E +KKQK IKE+K RP Sbjct: 37 IKQAEDLELDLVEISPNSDPPVCKIMNYGKFLYEKNKSTKEQKKKQKIIHIKEIKFRPGT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ I FL DG K+KI+++FRG E++HQ +G +L I + ++ ++ P Sbjct: 97 DEGDYQVKLRNIIKFLNDGYKIKITLRFRGGELIHQQIGVRVLHRISQDLHDLMTVEIFP 156 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQM MIL+ K Sbjct: 157 NKVEGRQMTMILAPKK 172 >gi|323143350|ref|ZP_08078038.1| translation initiation factor IF-3 [Succinatimonas hippei YIT 12066] gi|322416868|gb|EFY07514.1| translation initiation factor IF-3 [Succinatimonas hippei YIT 12066] Length = 156 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 5/138 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++A +DLVEI + P VC++++ K Y + +KKQK +KE+K RP Sbjct: 20 LRMAEDAGVDLVEISPNADPPVCRLIEYGKYLYEKS--KDQKKKKQKVVQVKEIKFRPGT 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF---GEISRID 117 D D QVKL+ + FL DG K K++++FRGRE+ HQ LG ++L ++ ++ ++ Sbjct: 78 DEGDYQVKLRNLIRFLEDGNKAKVTLRFRGRELAHQHLGLDVLKRVENDLCTERGLATVE 137 Query: 118 CEPKFEGRQMIMILSSKC 135 + EGRQ M+L+ K Sbjct: 138 SASRVEGRQATMVLAPKK 155 >gi|320335393|ref|YP_004172104.1| translation initiation factor IF-3 [Deinococcus maricopensis DSM 21211] gi|319756682|gb|ADV68439.1| Translation initiation factor IF-3 [Deinococcus maricopensis DSM 21211] Length = 198 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 71/120 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA++ +LDLV + + P VCK++D + RY Q+N E RK+ ++ +K +K R I Sbjct: 37 MAMARQKSLDLVMVGPTAVPPVCKLMDYGRFRYEQQQNEKENRKRARAHEVKAIKFRVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL++G KVK+++ FRGRE H +LG +L + E +I + P Sbjct: 97 DDNDFKTKTNHVRRFLQEGHKVKVTIMFRGRERTHPELGERILHRVAETLADIGAPESTP 156 >gi|302380600|ref|ZP_07269065.1| translation initiation factor IF-3 [Finegoldia magna ACS-171-V-Col3] gi|303233987|ref|ZP_07320636.1| translation initiation factor IF-3 [Finegoldia magna BVS033A4] gi|302311543|gb|EFK93559.1| translation initiation factor IF-3 [Finegoldia magna ACS-171-V-Col3] gi|302494912|gb|EFL54669.1| translation initiation factor IF-3 [Finegoldia magna BVS033A4] Length = 168 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 30 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 90 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 149 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 150 SMEGRMMIMFMGP 162 >gi|168188009|ref|ZP_02622644.1| translation initiation factor IF-3 [Clostridium botulinum C str. Eklund] gi|169294161|gb|EDS76294.1| translation initiation factor IF-3 [Clostridium botulinum C str. Eklund] Length = 134 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 79/134 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV I S+ TP VCKI+D K Y K EA+KKQK +KE+++ P I+ Sbjct: 1 MAEEKELDLVMIASNSTPPVCKIMDYGKYLYEQTKKVKEAKKKQKVINVKEIRLSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD+++K FL KVK++V+FRGRE + G+++L ++ I+ K Sbjct: 61 HDVEIKANRTRKFLEAENKVKVTVRFRGREADYSYKGKKILDQFVSEIEDVCVIEKPAKL 120 Query: 123 EGRQMIMILSSKCV 136 EGR MI+IL+ K Sbjct: 121 EGRNMILILAPKRA 134 >gi|118444421|ref|YP_877834.1| translation initiation factor IF-3 [Clostridium novyi NT] gi|118134877|gb|ABK61921.1| translation initiation factor IF-3 [Clostridium novyi NT] Length = 134 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 80/134 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E LDLV I S+ TP VCKI+D K Y K EA+KKQK IKE+++ P I+ Sbjct: 1 MAEEKELDLVMIASNSTPPVCKIMDYGKYLYEQTKKVKEAKKKQKVINIKEIRLSPTIEK 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD+++K FL+ KVK++V+FRGRE + G+++L ++ I+ K Sbjct: 61 HDIEIKANRTRKFLQAENKVKVTVRFRGREADYSYKGKKILDQFVSEIEDVCVIEKPAKL 120 Query: 123 EGRQMIMILSSKCV 136 EGR MI+IL+ K Sbjct: 121 EGRNMILILAPKRA 134 >gi|223936228|ref|ZP_03628141.1| translation initiation factor IF-3 [bacterium Ellin514] gi|223895090|gb|EEF61538.1| translation initiation factor IF-3 [bacterium Ellin514] Length = 198 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ +DLVEI + TP VC+++D K RY K E++K Q + +KE+++ P I Sbjct: 20 LNMARANTVDLVEIAPNATPPVCRLVDFGKFRYEQAKKDKESKKHQHANKVKEIQLSPKI 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD VKL FL + KVK+ +KFRGRE+ H + G +L++ + + D P Sbjct: 80 DPHDFGVKLNHAVDFLCEDMKVKVVLKFRGREMAHTEYGFQLINKMIKEVTPYGHPDANP 139 Query: 121 KFEGRQMIMILSS 133 K G+ + ++LS Sbjct: 140 KLIGKAINLMLSP 152 >gi|27365717|ref|NP_761245.1| translation initiation factor 3 [Vibrio vulnificus CMCP6] gi|37680128|ref|NP_934737.1| translation initiation factor 3 [Vibrio vulnificus YJ016] gi|320156123|ref|YP_004188502.1| translation initiation factor 3 [Vibrio vulnificus MO6-24/O] gi|27361866|gb|AAO10772.1| Translation initiation factor 3 [Vibrio vulnificus CMCP6] gi|37198874|dbj|BAC94708.1| translation initiation factor 3 [Vibrio vulnificus YJ016] gi|319931435|gb|ADV86299.1| translation initiation factor 3 [Vibrio vulnificus MO6-24/O] Length = 129 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 83/128 (64%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L +K E + ++ P K EGRQM Sbjct: 61 LRNLIRFLEEGNKVKVTIRFRGREMAHQEIGVDVLERLKVDTVEHAVVESFPTKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|297588370|ref|ZP_06947013.1| translation initiation factor IF3 [Finegoldia magna ATCC 53516] gi|297573743|gb|EFH92464.1| translation initiation factor IF3 [Finegoldia magna ATCC 53516] Length = 168 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ +LDLV + + P VCKILD K +Y K EA+K QK +KE+++ P I Sbjct: 30 LKMAEDKHLDLVNVAPNAKPPVCKILDYGKYKYDALKKEKEAKKNQKVINVKEIRLSPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+VK FL + +VK+SV+FRGRE+ H+DLG+E+L E ++ +I+ +P Sbjct: 90 EKHDLEVKANQASKFLSNENRVKVSVRFRGRELGHKDLGKEVLDKFYELTKDVGQIEKKP 149 Query: 121 KFEGRQMIMILSS 133 EGR MIM + Sbjct: 150 SMEGRMMIMFMGP 162 >gi|227537392|ref|ZP_03967441.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33300] gi|300772849|ref|ZP_07082718.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33861] gi|227242770|gb|EEI92785.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33300] gi|300759020|gb|EFK55847.1| translation initiation factor IF3 [Sphingobacterium spiritivorum ATCC 33861] Length = 177 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 72/131 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A E LDLVEI + P VCKI+D K Y +K E + K T IKE++ P Sbjct: 37 LELADELELDLVEISPNAVPPVCKIIDYSKFIYEQKKKQKEIKANAKQTVIKEIRFGPNT 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD KLK FL G KV+ V F+GR I+H+++G LL + + +++ P Sbjct: 97 SEHDFDFKLKHAMRFLESGEKVRAYVHFKGRAIVHKEMGEILLLRFAQALEDYGKVELLP 156 Query: 121 KFEGRQMIMIL 131 K EG++M + + Sbjct: 157 KLEGKRMFLTI 167 >gi|188587762|ref|YP_001921630.1| translation initiation factor IF-3 [Clostridium botulinum E3 str. Alaska E43] gi|251779042|ref|ZP_04821962.1| translation initiation factor IF-3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498043|gb|ACD51179.1| translation initiation factor IF-3 [Clostridium botulinum E3 str. Alaska E43] gi|243083357|gb|EES49247.1| translation initiation factor IF-3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 173 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+E LDLV I + P VCKI+D K Y K EA+KKQK +KEV++ I Sbjct: 38 MRMAEEQELDLVMISPNANPPVCKIMDFGKFIYEQSKKEKEAKKKQKVVSVKEVRVSLTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL DG KVKI+V+FRGRE+ +G +L N ++ ++ +I+ P Sbjct: 98 EEHDISIKAKNARKFLLDGDKVKITVRFRGREMELTHIGARILDNFAKKLEDVCQIEKHP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+L K Sbjct: 158 KKEGRNMTMVLGPKK 172 >gi|212550460|ref|YP_002308777.1| translation initiation factor IF-3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229485920|sp|B6YQ94|IF3_AZOPC RecName: Full=Translation initiation factor IF-3 gi|212548698|dbj|BAG83366.1| translation initiation factor IF-3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 183 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 74/136 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA E LDL+EI + P VCKI D +K + +K+ E + K +KE++ P Sbjct: 39 LRMAGELELDLIEISPTAVPPVCKIFDYQKFIFQQKKHQKEQKVKLSKIVVKEIRFGPQT 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL +G KVK V FRGR I+ ++ G LL + +++ P Sbjct: 99 DEHDYSFKLKHAKSFLEEGNKVKAYVFFRGRSILFKEQGEILLLRFANDLEDYGKVEQLP 158 Query: 121 KFEGRQMIMILSSKCV 136 EG++MI+ L+ K V Sbjct: 159 ILEGKKMIITLAPKKV 174 >gi|237668334|ref|ZP_04528318.1| translation initiation factor IF-3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656682|gb|EEP54238.1| translation initiation factor IF-3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 173 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 80/135 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCK++D K Y K EA+KKQK IKE+++ I+ Sbjct: 39 RLADENELDLVMISPNAKPPVCKVMDYGKFVYEQSKKEKEAKKKQKVISIKEIRVSLTIE 98 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD+ +K K FL DG KVKI+V+FRGRE+ +G +L+N + ++S I+ PK Sbjct: 99 EHDIDIKAKNARKFLLDGDKVKITVRFRGREMELGHIGERILNNFTAKLEDVSIIEKRPK 158 Query: 122 FEGRQMIMILSSKCV 136 EGR M ++L K Sbjct: 159 REGRSMTLVLGPKKA 173 >gi|301167261|emb|CBW26843.1| translation initiation factor if-3 [Bacteriovorax marinus SJ] Length = 198 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 82/133 (61%), Gaps = 1/133 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A + LDLVE+ + P V K++D K +Y QK A EA+KKQ +KE++ RP I+ Sbjct: 46 DIASDLGLDLVEVSPTAKPPVVKVIDYGKFKYDQQKKANEAKKKQAQVSLKEIQFRPNIE 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS-RIDCEP 120 HDL+ KLK + FL G K+K+ ++FRGRE+ ++DLG +I E+ +++ EP Sbjct: 106 AHDLETKLKRAEKFLGQGDKIKMVMQFRGREMAYKDLGLSKFKDILATVEEMGSQVESEP 165 Query: 121 KFEGRQMIMILSS 133 K G ++I I++ Sbjct: 166 KMMGNRIITIVAP 178 >gi|304310699|ref|YP_003810297.1| Translation initiation factor IF-3 [gamma proteobacterium HdN1] gi|301796432|emb|CBL44640.1| Translation initiation factor IF-3 [gamma proteobacterium HdN1] Length = 183 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 85/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A EA LDLVEI + P VC+++D K + +K EA+KKQK +KE+K RPV Sbjct: 47 LDAAYEAELDLVEIAADAVPPVCRVMDYGKHIFEEKKQKNEAKKKQKQIQVKEIKFRPVT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+ + FL DG K KI+++FRGRE+ HQ+L LL ++ E ++ +P Sbjct: 107 DEGDYQVKLRNLKRFLSDGDKAKITMRFRGREVTHQELAITLLRRVEADLEEFGAVEQQP 166 Query: 121 KFEGRQMIMILSSKC 135 + EGRQM+M++ K Sbjct: 167 EMEGRQMVMVMGPKK 181 >gi|40062681|gb|AAR37594.1| translation initiation factor IF-3 [uncultured marine bacterium 314] Length = 181 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 63/133 (47%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDL+EI P VCKI D+ K RY +QK A +A+KKQK +KE+K+RPV Sbjct: 48 VEMAKQEGLDLIEISPKANPPVCKITDIGKYRYDLQKKANKAKKKQKIVNLKEIKLRPVT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD KLK FL G KVK +V+F+GRE+ H LG+EL+ I + +I+ +P Sbjct: 108 DIHDYNFKLKNAQKFLEKGDKVKFTVRFKGREMQHTHLGKELMKRIINDTANLGKIEVDP 167 Query: 121 KFEGRQMIMILSS 133 K EGRQ+IMI+ Sbjct: 168 KLEGRQIIMIIQP 180 >gi|39931265|sp|Q83C11|IF3_COXBU RecName: Full=Translation initiation factor IF-3 Length = 185 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+I++ K ++ K +KKQ+ +KEVK RP Sbjct: 36 LTMAEEAGLDLVEISPTAKPPVCRIMNFGKYQFEQSKRKAAQKKKQRLVHLKEVKFRPGT 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ I FL G KVK+S++FRGRE+ H++LG ELL +K G I ++ EP Sbjct: 96 DVGDYQVKLRKIATFLDRGDKVKVSLRFRGREMQHRELGLELLGRVKRDLGNI-VVEQEP 154 Query: 121 KFEGRQMIMIL 131 + EGRQM M++ Sbjct: 155 RLEGRQMTMVV 165 >gi|168701960|ref|ZP_02734237.1| translation initiation factor IF-3 [Gemmata obscuriglobus UQM 2246] Length = 203 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 3/135 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+EA LDLVE+ P VCKI+D K +Y K + + +QK +KE+++RP Sbjct: 29 LEMAREAGLDLVEVADREKPPVCKIMDYGKFKYAQSKKSHQKTHQQK---LKEIRVRPKT 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K FL KV+++V FRGRE+ H + G+ +++ + E +++ Sbjct: 86 GDHDIETKIKQAKMFLEHNDKVQVNVLFRGREMQHIEEGQRVMNQVLEALVNDCKLEMPA 145 Query: 121 KFEGRQMIMILSSKC 135 K EG++M+ +L+ K Sbjct: 146 KMEGKRMVALLAPKA 160 >gi|149177025|ref|ZP_01855633.1| translation initiation factor IF-3 [Planctomyces maris DSM 8797] gi|148844090|gb|EDL58445.1| translation initiation factor IF-3 [Planctomyces maris DSM 8797] Length = 131 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 2/131 (1%) Query: 6 EANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDL 65 EANLDLVE+ S P VC+I+D KL+Y +K + K Q +KE++MRP I HD+ Sbjct: 2 EANLDLVEVASDAKPPVCRIMDYGKLKYERKKKTSKNTK-QHQVQLKEIRMRPKIGKHDI 60 Query: 66 QVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE-G 124 + KLK+ FL KVK ++ FRGRE H +LGR +L +I+E+ EI++++ G Sbjct: 61 EFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGDIQEQLSEIAKVEQAATMASG 120 Query: 125 RQMIMILSSKC 135 R MIM+L+ + Sbjct: 121 RNMIMVLAPRS 131 >gi|237744050|ref|ZP_04574531.1| translation initiation factor IF-3 [Fusobacterium sp. 7_1] gi|229431279|gb|EEO41491.1| translation initiation factor IF-3 [Fusobacterium sp. 7_1] Length = 188 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 54 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E++ ++ Sbjct: 114 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEVAEVEK-- 171 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 172 KYADKQKHLILSPKKI 187 >gi|29654623|ref|NP_820315.1| translation initiation factor IF-3 [Coxiella burnetii RSA 493] gi|153207432|ref|ZP_01946132.1| translation initiation factor IF-3 [Coxiella burnetii 'MSU Goat Q177'] gi|154705918|ref|YP_001424762.1| translation initiation factor IF-3 [Coxiella burnetii Dugway 5J108-111] gi|161830327|ref|YP_001597174.1| translation initiation factor IF-3 [Coxiella burnetii RSA 331] gi|212212293|ref|YP_002303229.1| translation initiation factor IF-3 [Coxiella burnetii CbuG_Q212] gi|212218738|ref|YP_002305525.1| translation initiation factor IF-3 [Coxiella burnetii CbuK_Q154] gi|29541891|gb|AAO90829.1| bacterial protein translation initiation factor 3 (IF-3) [Coxiella burnetii RSA 493] gi|120576563|gb|EAX33187.1| translation initiation factor IF-3 [Coxiella burnetii 'MSU Goat Q177'] gi|154355204|gb|ABS76666.1| bacterial protein translation initiation factor 3 (IF-3) [Coxiella burnetii Dugway 5J108-111] gi|161762194|gb|ABX77836.1| translation initiation factor IF-3 [Coxiella burnetii RSA 331] gi|212010703|gb|ACJ18084.1| bacterial protein translation initiation factor 3 [Coxiella burnetii CbuG_Q212] gi|212013000|gb|ACJ20380.1| bacterial protein translation initiation factor 3 [Coxiella burnetii CbuK_Q154] Length = 169 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVEI + P VC+I++ K ++ K +KKQ+ +KEVK RP Sbjct: 20 LTMAEEAGLDLVEISPTAKPPVCRIMNFGKYQFEQSKRKAAQKKKQRLVHLKEVKFRPGT 79 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+ D QVKL+ I FL G KVK+S++FRGRE+ H++LG ELL +K G I ++ EP Sbjct: 80 DVGDYQVKLRKIATFLDRGDKVKVSLRFRGREMQHRELGLELLGRVKRDLGNI-VVEQEP 138 Query: 121 KFEGRQMIMIL 131 + EGRQM M++ Sbjct: 139 RLEGRQMTMVV 149 >gi|261250894|ref|ZP_05943468.1| translation initiation factor 3 [Vibrio orientalis CIP 102891] gi|260937767|gb|EEX93755.1| translation initiation factor 3 [Vibrio orientalis CIP 102891] Length = 129 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K+A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKSAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE E++ ++ P K EGRQM Sbjct: 61 LRNLTRFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTVELAVVESFPKKIEGRQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMVLAPKK 128 >gi|19703670|ref|NP_603232.1| translation initiation factor IF-3 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327259|ref|ZP_06869814.1| translation initiation factor IF3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22095767|sp|Q8R5Y3|IF3_FUSNN RecName: Full=Translation initiation factor IF-3 gi|19713790|gb|AAL94531.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155616|gb|EFG96378.1| translation initiation factor IF3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 188 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 54 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 113 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E + ++ Sbjct: 114 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFSETAEVEK-- 171 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K V Sbjct: 172 KYADKQKHLILSPKKV 187 >gi|291563634|emb|CBL42450.1| bacterial translation initiation factor 3 (bIF-3) [butyrate-producing bacterium SS3/4] Length = 164 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 88/133 (66%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++A LDLV+I + P VCKI+D K +Y + + EA+KKQK+ +KEV++ P ID Sbjct: 31 KMARDAELDLVKIAPAAKPPVCKIIDYGKYKYEMIRKEKEAKKKQKTIEVKEVRLSPNID 90 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DL K+ + F+ G KVK++++FRGRE+ H + + +L + E+ +I+ +D K Sbjct: 91 TNDLNTKIGSARKFIEKGNKVKVTLRFRGREMAHMNQTKYILDDFAEKLSDIAVVDKPSK 150 Query: 122 FEGRQMIMILSSK 134 EGR ++M L++K Sbjct: 151 VEGRSLVMFLTAK 163 >gi|257455910|ref|ZP_05621127.1| translation initiation factor IF-3 [Enhydrobacter aerosaccus SK60] gi|257446656|gb|EEV21682.1| translation initiation factor IF-3 [Enhydrobacter aerosaccus SK60] Length = 143 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A++A LDLVEI P V K++D RK Y ++ A EA+K QK T +KE+K+RP Sbjct: 7 LQAARDAELDLVEIVPDAQPPVAKVMDYRKYLYDQKQKAKEAKKNQKQTQLKEIKLRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL D KVK++++FRGRE+ HQ +G + L + +++ ++ +P Sbjct: 67 EEADYQVKLRKIREFLEDQDKVKVTIRFRGREMAHQQIGLQQLEKVIADTTDVANVEQQP 126 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 127 KVEGRQMGMLLGP 139 >gi|322385726|ref|ZP_08059370.1| translation initiation factor IF3 [Streptococcus cristatus ATCC 51100] gi|321270464|gb|EFX53380.1| translation initiation factor IF3 [Streptococcus cristatus ATCC 51100] Length = 176 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 101 GDFDTKLRNARKFLGKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 161 DGRQMFMQMAP 171 >gi|148653934|ref|YP_001281027.1| translation initiation factor IF-3 [Psychrobacter sp. PRwf-1] gi|148573018|gb|ABQ95077.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter sp. PRwf-1] Length = 167 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 62/132 (46%), Positives = 86/132 (65%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A++ NLDLVE+ P VCKI+D ++ Y ++ A EA+K QK T +KE+K+RP D Sbjct: 32 KAARDDNLDLVELVPDAKPPVCKIMDYKRYLYDQKQKAKEAKKNQKQTQLKEMKLRPSTD 91 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D QVKL+ I FL D KVK++++FRGRE+ H +LGR+ L I EIS ++ PK Sbjct: 92 EADYQVKLRKIISFLEDQDKVKVTIRFRGREMAHTELGRQQLERIIADTAEISNVEQHPK 151 Query: 122 FEGRQMIMILSS 133 EGRQM M+L Sbjct: 152 MEGRQMGMLLGP 163 >gi|260774299|ref|ZP_05883214.1| translation initiation factor 3 [Vibrio metschnikovii CIP 69.14] gi|260611260|gb|EEX36464.1| translation initiation factor 3 [Vibrio metschnikovii CIP 69.14] Length = 129 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKE+K RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQVQIKEIKFRPGTDIGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L+ + FL +G KVK++++FRGRE+ HQ++G ++L+ +KE +I+ ++ P + E RQM Sbjct: 61 LRNLTSFLEEGNKVKVTIRFRGREMAHQEIGVDVLNRLKEDTADIAVVESFPSRIEARQM 120 Query: 128 IMILSSKC 135 IM+L+ K Sbjct: 121 IMMLAPKK 128 >gi|169334529|ref|ZP_02861722.1| hypothetical protein ANASTE_00932 [Anaerofustis stercorihominis DSM 17244] gi|169259246|gb|EDS73212.1| hypothetical protein ANASTE_00932 [Anaerofustis stercorihominis DSM 17244] Length = 150 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + NLDLV++ P VCKILD K +Y + E +K QK IKE++ + Sbjct: 11 LKQADQRNLDLVKVSPEAKPPVCKILDYGKFKYEQNRKEKENKKNQKVVNIKEIRTSVRV 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+VK K FL G KVK+SV+FRGRE+ + + G+E+L E+ I+ +P Sbjct: 71 QDHDLEVKAKNCRKFLSAGDKVKVSVRFRGREMAYVNRGKEVLLKFASMVDEVGTIETKP 130 Query: 121 KFEGRQMIMILSS 133 K EGR M LS Sbjct: 131 KLEGRNYTMTLSP 143 >gi|313203699|ref|YP_004042356.1| bacterial translation initiation factor 3 (bif-3) [Paludibacter propionicigenes WB4] gi|312443015|gb|ADQ79371.1| bacterial translation initiation factor 3 (bIF-3) [Paludibacter propionicigenes WB4] Length = 206 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVEI + P VCKI+D +K Y I+K EA+ K +KE++ P Sbjct: 70 IRIADQLELDLVEISPNAVPPVCKIVDYQKFLYQIKKREKEAKAKTAKVVLKEIRFGPQT 129 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK FL++GCKVK V F+GR I+ ++ G LL + +++D P Sbjct: 130 DDHDYNFKLKHAQEFLKEGCKVKAYVFFKGRSILFKEQGEVLLLRFASDLEDYAKVDQLP 189 Query: 121 KFEGRQMIMILSSKC 135 + EG++MI++ S K Sbjct: 190 QLEGKRMIIMFSPKK 204 >gi|187932865|ref|YP_001886668.1| translation initiation factor IF-3 [Clostridium botulinum B str. Eklund 17B] gi|187721018|gb|ACD22239.1| translation initiation factor IF-3 [Clostridium botulinum B str. Eklund 17B] Length = 173 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA+E LDLV I + P VCKI+D K Y K EA+KKQK +KEV++ I Sbjct: 38 MRMAEEQELDLVMISPNANPPVCKIMDFGKFIYEQSKKEKEAKKKQKVVSVKEVRVSLTI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+ +K K FL DG KVKI+V+FRGRE+ +G +L N ++ ++ +I+ P Sbjct: 98 EEHDIFIKAKNARKFLLDGDKVKITVRFRGREMELTHIGARILDNFAKKLEDVCQIEKHP 157 Query: 121 KFEGRQMIMILSSKC 135 K EGR M M+L K Sbjct: 158 KKEGRNMTMVLGPKK 172 >gi|152996609|ref|YP_001341444.1| translation initiation factor IF-3 [Marinomonas sp. MWYL1] gi|150837533|gb|ABR71509.1| translation initiation factor IF-3 [Marinomonas sp. MWYL1] Length = 177 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA LDLV+I P VCKI+D K + +K +K K +KE+K RP Sbjct: 42 LKAAQEATLDLVQIA-DSDPIVCKIMDYGKHIFEAKKAKAAQKKNAKQIQVKEMKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K+S+++RGRE+ HQ+LG +L++ + + ++ Sbjct: 101 EEGDYQVKLRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMNRVAADLEDYGVVEQAA 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+ M+L K Sbjct: 161 KMEGRQLTMVLGPKK 175 >gi|32265942|ref|NP_859974.1| translation initiation factor IF-3 [Helicobacter hepaticus ATCC 51449] gi|39931233|sp|Q7VJ08|IF3_HELHP RecName: Full=Translation initiation factor IF-3 gi|32261991|gb|AAP77040.1| translation initiation factor IF3 [Helicobacter hepaticus ATCC 51449] Length = 174 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A +A LDLV I + P VCKI+D K RY +K EARKKQK IKE+K+ I Sbjct: 36 LNLAHKAGLDLVLISPNAKPPVCKIMDYGKFRYQAEKKQKEARKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V + RE+ D G + L + +I+ + EP Sbjct: 96 AQNDINYKVKHAIEFLESGKHVKFKVFLKQRELNIPDAGMDTLGKVAVMLEDIAIAEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EG+ + ++ K Sbjct: 156 KLEGKHLNVLYVPKK 170 >gi|125718311|ref|YP_001035444.1| translation initiation factor IF-3 [Streptococcus sanguinis SK36] gi|323351272|ref|ZP_08086928.1| translation initiation factor IF3 [Streptococcus sanguinis VMC66] gi|125498228|gb|ABN44894.1| Translation initiation factor IF-3, putative [Streptococcus sanguinis SK36] gi|322122496|gb|EFX94207.1| translation initiation factor IF3 [Streptococcus sanguinis VMC66] gi|324991555|gb|EGC23488.1| translation initiation factor IF3 [Streptococcus sanguinis SK353] gi|324993916|gb|EGC25835.1| translation initiation factor IF3 [Streptococcus sanguinis SK405] gi|324994765|gb|EGC26678.1| translation initiation factor IF3 [Streptococcus sanguinis SK678] gi|325687204|gb|EGD29226.1| translation initiation factor IF3 [Streptococcus sanguinis SK72] gi|325690865|gb|EGD32866.1| translation initiation factor IF3 [Streptococcus sanguinis SK115] gi|325694910|gb|EGD36815.1| translation initiation factor IF3 [Streptococcus sanguinis SK150] gi|325696067|gb|EGD37958.1| translation initiation factor IF3 [Streptococcus sanguinis SK160] gi|327461073|gb|EGF07406.1| translation initiation factor IF3 [Streptococcus sanguinis SK1057] gi|327463178|gb|EGF09499.1| translation initiation factor IF3 [Streptococcus sanguinis SK1] gi|327470710|gb|EGF16166.1| translation initiation factor IF3 [Streptococcus sanguinis SK330] gi|327474787|gb|EGF20192.1| translation initiation factor IF3 [Streptococcus sanguinis SK408] gi|328946544|gb|EGG40683.1| translation initiation factor IF3 [Streptococcus sanguinis SK1087] gi|332359451|gb|EGJ37271.1| translation initiation factor IF3 [Streptococcus sanguinis SK355] gi|332362512|gb|EGJ40312.1| translation initiation factor IF3 [Streptococcus sanguinis SK1056] gi|332367205|gb|EGJ44941.1| translation initiation factor IF3 [Streptococcus sanguinis SK1059] Length = 176 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G K+K+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 101 GDFDTKLRNARKFLEKGNKIKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 161 DGRQMFMQMAP 171 >gi|298530061|ref|ZP_07017463.1| translation initiation factor IF-3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509435|gb|EFI33339.1| translation initiation factor IF-3 [Desulfonatronospira thiodismutans ASO3-1] Length = 162 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 91/133 (68%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MAQ + DLVE+ + P VC+I+D K +Y QK EA+KKQ +KE+K+RP Sbjct: 24 LDMAQSSGFDLVEVAPNADPPVCRIMDFGKYQYQQQKKKQEAKKKQSRVQVKEIKVRPKT 83 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL K++ I F+ +G +VK+SV FRGRE+ H+D G ++L+ + E+ +++R++ EP Sbjct: 84 DVNDLNTKVRHIRKFIEEGDRVKVSVFFRGREMAHKDRGADILNKVVEQTSDVARVEQEP 143 Query: 121 KFEGRQMIMILSS 133 ++EGR M ++LS Sbjct: 144 RYEGRTMHLLLSP 156 >gi|293365204|ref|ZP_06611921.1| translation initiation factor IF3 [Streptococcus oralis ATCC 35037] gi|306825434|ref|ZP_07458774.1| translation initiation factor IF3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306829311|ref|ZP_07462501.1| translation initiation factor IF3 [Streptococcus mitis ATCC 6249] gi|315612967|ref|ZP_07887878.1| translation initiation factor IF3 [Streptococcus sanguinis ATCC 49296] gi|331266580|ref|YP_004326210.1| translation initiation factor IF-3 [Streptococcus oralis Uo5] gi|291316654|gb|EFE57090.1| translation initiation factor IF3 [Streptococcus oralis ATCC 35037] gi|304428397|gb|EFM31487.1| translation initiation factor IF3 [Streptococcus mitis ATCC 6249] gi|304432372|gb|EFM35348.1| translation initiation factor IF3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|315315077|gb|EFU63118.1| translation initiation factor IF3 [Streptococcus sanguinis ATCC 49296] gi|326683252|emb|CBZ00870.1| translation initiation factor IF-3 [Streptococcus oralis Uo5] Length = 185 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|307703742|ref|ZP_07640683.1| translation initiation factor IF-3 [Streptococcus oralis ATCC 35037] gi|322374507|ref|ZP_08049021.1| translation initiation factor IF-3 [Streptococcus sp. C300] gi|307622577|gb|EFO01573.1| translation initiation factor IF-3 [Streptococcus oralis ATCC 35037] gi|321280007|gb|EFX57046.1| translation initiation factor IF-3 [Streptococcus sp. C300] Length = 176 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|15900836|ref|NP_345440.1| translation initiation factor IF-3 [Streptococcus pneumoniae TIGR4] gi|116515644|ref|YP_816329.1| translation initiation factor IF-3 [Streptococcus pneumoniae D39] gi|169832624|ref|YP_001694404.1| translation initiation factor IF-3 [Streptococcus pneumoniae Hungary19A-6] gi|172079515|ref|ZP_02707981.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1873-00] gi|183603128|ref|ZP_02710419.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1087-00] gi|183603354|ref|ZP_02714421.2| translation initiation factor IF-3 [Streptococcus pneumoniae SP195] gi|183603475|ref|ZP_02715191.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC0288-04] gi|183603789|ref|ZP_02721557.2| translation initiation factor IF-3 [Streptococcus pneumoniae MLV-016] gi|221231722|ref|YP_002510874.1| translation initiation factor IF-3 [Streptococcus pneumoniae ATCC 700669] gi|225854463|ref|YP_002735975.1| translation initiation factor IF-3 [Streptococcus pneumoniae JJA] gi|225856617|ref|YP_002738128.1| translation initiation factor IF-3 [Streptococcus pneumoniae P1031] gi|225858752|ref|YP_002740262.1| translation initiation factor IF-3 [Streptococcus pneumoniae 70585] gi|225861154|ref|YP_002742663.1| translation initiation factor IF-3 [Streptococcus pneumoniae Taiwan19F-14] gi|237650891|ref|ZP_04525143.1| translation initiation factor IF-3 [Streptococcus pneumoniae CCRI 1974] gi|289167802|ref|YP_003446071.1| translation initiation factor IF-3 [Streptococcus mitis B6] gi|298229847|ref|ZP_06963528.1| translation initiation factor IF-3 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254546|ref|ZP_06978132.1| translation initiation factor IF-3 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503031|ref|YP_003724971.1| translation initiation factor IF-3 [Streptococcus pneumoniae TCH8431/19A] gi|303254427|ref|ZP_07340533.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS455] gi|303259871|ref|ZP_07345846.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP-BS293] gi|303264707|ref|ZP_07350625.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS397] gi|303267236|ref|ZP_07353101.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS457] gi|303269522|ref|ZP_07355287.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS458] gi|307127490|ref|YP_003879521.1| translation initiation factor IF-3 [Streptococcus pneumoniae 670-6B] gi|307708591|ref|ZP_07645055.1| translation initiation factor IF-3 [Streptococcus mitis NCTC 12261] gi|54037393|sp|P65145|IF3_STRR6 RecName: Full=Translation initiation factor IF-3 gi|54041114|sp|P65144|IF3_STRPN RecName: Full=Translation initiation factor IF-3 gi|122278785|sp|Q04KW9|IF3_STRP2 RecName: Full=Translation initiation factor IF-3 gi|238688289|sp|B1IBB9|IF3_STRPI RecName: Full=Translation initiation factor IF-3 gi|254803494|sp|C1C6T6|IF3_STRP7 RecName: Full=Translation initiation factor IF-3 gi|254803495|sp|B8ZP56|IF3_STRPJ RecName: Full=Translation initiation factor IF-3 gi|254803497|sp|C1CDV4|IF3_STRZJ RecName: Full=Translation initiation factor IF-3 gi|254803498|sp|C1CK40|IF3_STRZP RecName: Full=Translation initiation factor IF-3 gi|254803499|sp|C1CRU1|IF3_STRZT RecName: Full=Translation initiation factor IF-3 gi|14972433|gb|AAK75080.1| translation initiation factor IF-3 [Streptococcus pneumoniae TIGR4] gi|116076220|gb|ABJ53940.1| translation initiation factor IF-3 [Streptococcus pneumoniae D39] gi|168995126|gb|ACA35738.1| translation initiation factor IF-3 [Streptococcus pneumoniae Hungary19A-6] gi|172043479|gb|EDT51525.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1873-00] gi|183570945|gb|EDT91473.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC1087-00] gi|183571413|gb|EDT91941.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP195] gi|183574728|gb|EDT95256.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC0288-04] gi|183578415|gb|EDT98943.1| translation initiation factor IF-3 [Streptococcus pneumoniae MLV-016] gi|220674182|emb|CAR68710.1| translation initiation factor IF-3 [Streptococcus pneumoniae ATCC 700669] gi|225720905|gb|ACO16759.1| translation initiation factor IF-3 [Streptococcus pneumoniae 70585] gi|225722553|gb|ACO18406.1| translation initiation factor IF-3 [Streptococcus pneumoniae JJA] gi|225724878|gb|ACO20730.1| translation initiation factor IF-3 [Streptococcus pneumoniae P1031] gi|225727713|gb|ACO23564.1| translation initiation factor IF-3 [Streptococcus pneumoniae Taiwan19F-14] gi|288907369|emb|CBJ22206.1| translation initiation factor IF-3 [Streptococcus mitis B6] gi|298238626|gb|ADI69757.1| translation initiation factor IF-3 [Streptococcus pneumoniae TCH8431/19A] gi|301794097|emb|CBW36503.1| translation initiation factor IF-3 [Streptococcus pneumoniae INV104] gi|301799935|emb|CBW32518.1| translation initiation factor IF-3 [Streptococcus pneumoniae OXC141] gi|301801802|emb|CBW34513.1| translation initiation factor IF-3 [Streptococcus pneumoniae INV200] gi|302598594|gb|EFL65634.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS455] gi|302639076|gb|EFL69536.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP-BS293] gi|302640958|gb|EFL71340.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS458] gi|302643245|gb|EFL73527.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS457] gi|302645794|gb|EFL76023.1| translation initiation factor IF-3 [Streptococcus pneumoniae BS397] gi|306484552|gb|ADM91421.1| translation initiation factor IF-3 [Streptococcus pneumoniae 670-6B] gi|307615340|gb|EFN94549.1| translation initiation factor IF-3 [Streptococcus mitis NCTC 12261] Length = 185 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|283769359|ref|ZP_06342258.1| translation initiation factor IF-3 [Bulleidia extructa W1219] gi|283104016|gb|EFC05400.1| translation initiation factor IF-3 [Bulleidia extructa W1219] Length = 182 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A + +LDL+ + ++ P V +ILD + + K EA++ Q T +K +++ PVI Sbjct: 46 LQAAYDQDLDLLLVSANANPPVARILDYGRYHFEDLKKKREAKRNQSVTEVKPLRLSPVI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK +L DG KV+I ++FRGR I Q++GRE++ ++ +I+ + Sbjct: 106 DQHDFETKLKKSREWLEDGLKVRIDMRFRGRMITRQEIGREVIERFTQQISDIADVSKPA 165 Query: 121 KFEGRQMIMILSSKC 135 K EG + ++ S K Sbjct: 166 KLEGNTLSVVYSPKK 180 >gi|254519562|ref|ZP_05131618.1| translation initiation factor IF-3 [Clostridium sp. 7_2_43FAA] gi|226913311|gb|EEH98512.1| translation initiation factor IF-3 [Clostridium sp. 7_2_43FAA] Length = 153 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 79/135 (58%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VC+I+DL K Y K EA+KKQK T +KE++ I+ Sbjct: 19 RIADEKELDLVMISPNANPPVCRIMDLGKYIYEQSKKEKEAKKKQKITTLKEIRCSLTIE 78 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ +K K FL DG KVKI+V+F+GRE +G+++L N + ++ ++ K Sbjct: 79 ENDIAIKAKNAKKFLLDGDKVKITVRFKGREAQLGHIGQKILDNFVSKLEDVCVVEKPAK 138 Query: 122 FEGRQMIMILSSKCV 136 EGR M M+L K Sbjct: 139 HEGRNMTMVLGPKKA 153 >gi|157150634|ref|YP_001450321.1| translation initiation factor IF-3 [Streptococcus gordonii str. Challis substr. CH1] gi|262282400|ref|ZP_06060168.1| translation initiation factor IF-3 [Streptococcus sp. 2_1_36FAA] gi|157075428|gb|ABV10111.1| translation initiation factor IF-3 [Streptococcus gordonii str. Challis substr. CH1] gi|262261691|gb|EEY80389.1| translation initiation factor IF-3 [Streptococcus sp. 2_1_36FAA] Length = 176 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 78/131 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +++ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDVAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|319939329|ref|ZP_08013689.1| translation initiation factor IF-3 [Streptococcus anginosus 1_2_62CV] gi|319811315|gb|EFW07610.1| translation initiation factor IF-3 [Streptococcus anginosus 1_2_62CV] Length = 176 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 IADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ + +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAQATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|111658040|ref|ZP_01408742.1| hypothetical protein SpneT_02000773 [Streptococcus pneumoniae TIGR4] gi|148984701|ref|ZP_01817969.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP3-BS71] gi|148988399|ref|ZP_01819846.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP6-BS73] gi|148992906|ref|ZP_01822525.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP9-BS68] gi|148998606|ref|ZP_01826046.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP11-BS70] gi|149002509|ref|ZP_01827443.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS69] gi|149006365|ref|ZP_01830077.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP18-BS74] gi|149010395|ref|ZP_01831766.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP19-BS75] gi|149019550|ref|ZP_01834869.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP23-BS72] gi|303262285|ref|ZP_07348229.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS292] gi|307067616|ref|YP_003876582.1| hypothetical protein SPAP_0991 [Streptococcus pneumoniae AP200] gi|307704689|ref|ZP_07641588.1| translation initiation factor IF-3 [Streptococcus mitis SK597] gi|307706457|ref|ZP_07643266.1| translation initiation factor IF-3 [Streptococcus mitis SK321] gi|307709140|ref|ZP_07645599.1| translation initiation factor IF-3 [Streptococcus mitis SK564] gi|322376453|ref|ZP_08050946.1| translation initiation factor IF-3 [Streptococcus sp. M334] gi|147755604|gb|EDK62651.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP11-BS70] gi|147759446|gb|EDK66438.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS69] gi|147762142|gb|EDK69104.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP18-BS74] gi|147764876|gb|EDK71805.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP19-BS75] gi|147923092|gb|EDK74207.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP3-BS71] gi|147926080|gb|EDK77154.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP6-BS73] gi|147928358|gb|EDK79374.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP9-BS68] gi|147930925|gb|EDK81905.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP23-BS72] gi|302636608|gb|EFL67099.1| translation initiation factor IF-3 [Streptococcus pneumoniae SP14-BS292] gi|306409153|gb|ADM84580.1| hypothetical protein SPAP_0991 [Streptococcus pneumoniae AP200] gi|307618167|gb|EFN97325.1| translation initiation factor IF-3 [Streptococcus mitis SK321] gi|307620086|gb|EFN99203.1| translation initiation factor IF-3 [Streptococcus mitis SK564] gi|307621736|gb|EFO00774.1| translation initiation factor IF-3 [Streptococcus mitis SK597] gi|321282260|gb|EFX59267.1| translation initiation factor IF-3 [Streptococcus sp. M334] gi|327389237|gb|EGE87582.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA04375] gi|332073292|gb|EGI83771.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA17570] gi|332075575|gb|EGI86043.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA17545] gi|332076233|gb|EGI86699.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA41301] gi|332201425|gb|EGJ15495.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA47368] gi|332202814|gb|EGJ16883.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA41317] gi|332204962|gb|EGJ19027.1| translation initiation factor IF-3 [Streptococcus pneumoniae GA47901] Length = 176 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 41 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|213027934|ref|ZP_03342381.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 138 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 1/124 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA +DLVEI + P VC+I+D K Y K++ E +KKQK +KE+K RP Sbjct: 15 LEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K E++ ++ P Sbjct: 75 DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVESFP 134 Query: 121 -KFE 123 K E Sbjct: 135 TKIE 138 >gi|88706033|ref|ZP_01103741.1| translation initiation factor IF-3 [Congregibacter litoralis KT71] gi|88699747|gb|EAQ96858.1| translation initiation factor IF-3 [Congregibacter litoralis KT71] Length = 155 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 79/127 (62%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV I P VCK++D K + +K +KKQK T +KE+K RP + D QV Sbjct: 25 GMDLVLIADQSDPMVCKVMDYGKHIFEAKKQKNAQKKKQKRTQLKEMKFRPGTEEGDYQV 84 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQM Sbjct: 85 KLRNLVRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQM 144 Query: 128 IMILSSK 134 M+++ K Sbjct: 145 TMVIAPK 151 >gi|89891845|ref|ZP_01203346.1| translation initiation factor 3 [Flavobacteria bacterium BBFL7] gi|89515750|gb|EAS18551.1| translation initiation factor 3 [Flavobacteria bacterium BBFL7] Length = 130 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 46/129 (35%), Positives = 69/129 (53%) Query: 7 ANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 LDLVEI P V KI+D +K Y +K + IKE++ P D HD + Sbjct: 1 MELDLVEISPKADPPVAKIMDYKKFVYEQKKREKVMKANASKVVIKEIRFGPNTDDHDYE 60 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 K K + FL++G K+K V F+GR I+++D G LL + E+ +++ PK EG++ Sbjct: 61 FKRKHAEKFLKEGAKLKAYVFFKGRSIIYKDQGEILLLRLARDLEELGKVEQMPKLEGKR 120 Query: 127 MIMILSSKC 135 M M L+ K Sbjct: 121 MNMFLAPKK 129 >gi|146297791|ref|YP_001192382.1| initiation factor 3 [Flavobacterium johnsoniae UW101] gi|146152209|gb|ABQ03063.1| bacterial translation initiation factor 3 (bIF-3) [Flavobacterium johnsoniae UW101] Length = 129 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 72/127 (56%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VCKI+D +K Y +K + K +KE++ P D HD + K Sbjct: 1 MDLVEISPNAEPPVCKIMDYKKFVYEQKKRDKALKAKSSQVVVKEIRFGPQTDEHDYEFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 K + FL++G K+K V F+GR I+++D G+ LL + E +++ P EG++MI Sbjct: 61 RKNAEKFLKEGAKLKAFVFFKGRSIIYKDQGQILLLRLATDLEEYGKVEAMPVLEGKRMI 120 Query: 129 MILSSKC 135 M ++ K Sbjct: 121 MFIAPKK 127 >gi|206900270|ref|YP_002251027.1| translation initiation factor IF-3 [Dictyoglomus thermophilum H-6-12] gi|206739373|gb|ACI18431.1| translation initiation factor IF-3 [Dictyoglomus thermophilum H-6-12] Length = 168 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-GIKEVKMRPV 59 +++A+E NLDLVE+ + P VC+I+D K +Y + + EA+K QK +KE+K+RP Sbjct: 18 LKIAREKNLDLVEVAPNANPPVCRIMDFGKFKYELARKEKEAKKNQKIASEVKEIKIRPN 77 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I+ HD QVKL+ I FL G KV++ + F+GR++++ + G +LL I + ++ + + Sbjct: 78 IEEHDYQVKLRKIREFLEKGYKVRLIILFKGRQLIYNEWGDKLLERILQDISDLGTAEKK 137 Query: 120 PKFEGRQMIMILSS 133 + G +I +L Sbjct: 138 GQQVGSSLITMLVP 151 >gi|194397268|ref|YP_002037594.1| translation initiation factor IF-3 [Streptococcus pneumoniae G54] gi|238690817|sp|B5E478|IF3_STRP4 RecName: Full=Translation initiation factor IF-3 gi|194356935|gb|ACF55383.1| translation initiation factor IF-3 [Streptococcus pneumoniae G54] Length = 185 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|94264274|ref|ZP_01288068.1| Initiation factor 3 [delta proteobacterium MLMS-1] gi|93455319|gb|EAT05526.1| Initiation factor 3 [delta proteobacterium MLMS-1] Length = 142 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A+ + LDLVE+ + P VC+I+D K RY K +A+KKQ +KE+K+RP + H Sbjct: 10 AEASGLDLVEVSPTAKPPVCRIMDYGKYRYEQSKKQQDAKKKQTVVEVKEIKLRPKTEKH 69 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMH-QDLGRELLSNIKERFGEISRIDCEPKF 122 DL K+K I FL KVK++++FRGREI++ LG E+L+ I E + PK Sbjct: 70 DLDFKIKNIKKFLLQKNKVKVTLRFRGREIVYATTLGAEILNRIAGELTEEGTLLQAPKM 129 Query: 123 EGRQMIMILSSKC 135 EGRQM M++ K Sbjct: 130 EGRQMTMLVGPKA 142 >gi|224542061|ref|ZP_03682600.1| hypothetical protein CATMIT_01235 [Catenibacterium mitsuokai DSM 15897] gi|224524994|gb|EEF94099.1| hypothetical protein CATMIT_01235 [Catenibacterium mitsuokai DSM 15897] Length = 183 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A +A LDLV + P+VC+I+D K R+ QK E +K K IKE ++ P I Sbjct: 47 MNRAYDAGLDLVCVAPKAKPAVCRIMDYGKYRFEQQKKQKEMKKNSKVVAIKETQLSPTI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK +L+DG KVK++++FRGR++ H DLG++++ + E ++ Sbjct: 107 DVHDKNVKLKRTLKWLQDGDKVKVAIRFRGRQMAHVDLGQKIMDDFIAECSEYCVVEKPA 166 Query: 121 KFEGRQMIMILSSKCV 136 K EGR + +L+ K Sbjct: 167 KLEGRTLTAMLAPKKA 182 >gi|289548452|ref|YP_003473440.1| translation initiation factor IF-3 [Thermocrinis albus DSM 14484] gi|289182069|gb|ADC89313.1| translation initiation factor IF-3 [Thermocrinis albus DSM 14484] Length = 171 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 +++A+E LDLVE+ + P VCK+LD K Y ++K EARKKQ S +K++ M P Sbjct: 34 LKIAEERGLDLVEVAPNANPPVCKLLDYGKFLYELRKKEKEARKKQKEHSMEVKDIMMNP 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL DG KV++ ++FRGRE +H +LG L+ I E ++S+++ Sbjct: 94 RIDEHDLKVKLKHMREFLEDGDKVRVRIRFRGRENLHPELGDRLVQRILEELSDVSQLES 153 Query: 119 EPKFEGRQMIMILSSKC 135 PK EG + L K Sbjct: 154 PPKKEGNFLSFALLPKK 170 >gi|281357060|ref|ZP_06243550.1| translation initiation factor IF-3 [Victivallis vadensis ATCC BAA-548] gi|281316618|gb|EFB00642.1| translation initiation factor IF-3 [Victivallis vadensis ATCC BAA-548] Length = 167 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 76/133 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MAQ+ +DLV + TP V +I++ KL+Y +KN RK Q + +KEVK ID Sbjct: 33 EMAQDYGMDLVLVSDRATPPVVRIMNFGKLQYEQKKNLKAQRKNQAAQKLKEVKFHVNID 92 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + KLK FL GC++K+++ RGRE+ HQDL +L+ + E + D +PK Sbjct: 93 DHDYETKLKHALDFLEKGCRLKVTLALRGREMAHQDLAYKLMDQVMEALAPAADADGKPK 152 Query: 122 FEGRQMIMILSSK 134 GR + + + K Sbjct: 153 MLGRNISVNFAPK 165 >gi|148270333|ref|YP_001244793.1| translation initiation factor IF-3 [Thermotoga petrophila RKU-1] gi|147735877|gb|ABQ47217.1| bacterial translation initiation factor 3 (bIF-3) [Thermotoga petrophila RKU-1] Length = 150 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P V KI+D K +Y + K E +K K+ +K++K R I Sbjct: 17 LELAKEKGLDLVLVAPNENPPVAKIMDYGKYKYQLTKKQKENKK--KTVQLKQMKFRLNI 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q K+K I FL +G KV++ V F GRE+M + G+E+L + + +++ ++ P Sbjct: 75 DEHDYQTKVKHIRRFLEEGHKVRVVVMFIGREMMFAEKGKEILERVIKDTEDLAAVENPP 134 Query: 121 KFEGRQMIMILSSK 134 K EGR M M+L K Sbjct: 135 KMEGRDMWMVLKPK 148 >gi|308272688|emb|CBX29292.1| Translation initiation factor IF-3 [uncultured Desulfobacterium sp.] Length = 186 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + LDLVEI + P VCKI+D + +Y + K EA+KKQ + +KE+K+RP Sbjct: 53 LAAAADFGLDLVEISPNANPPVCKIMDYGRYKYELVKKKQEAKKKQSTFQVKEIKVRPKT 112 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK+ I F+ KVK++V FRGREI LGRELL I EI+ ++ P Sbjct: 113 SDHDLSVKIDHIIKFIGKKDKVKVTVVFRGREITLTQLGRELLDKIVSSTSEIAVVEQTP 172 Query: 121 KFEGRQMIMILSSK 134 +FEGR MIMIL+ K Sbjct: 173 RFEGRAMIMILAPK 186 >gi|254491506|ref|ZP_05104685.1| translation initiation factor IF-3, C-terminal domain, putative [Methylophaga thiooxidans DMS010] gi|224462984|gb|EEF79254.1| translation initiation factor IF-3, C-terminal domain, putative [Methylophaga thiooxydans DMS010] Length = 126 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 76/122 (62%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI P VC+I+D K + K +A+KKQK +KEVK RP + D QVKL+ Sbjct: 1 MEIAPQAKPPVCRIMDYGKFLFEESKQKAQAKKKQKQIQVKEVKFRPGTEEGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G K K+S++FRGRE+ HQDLG +LL + E+S ++ PK EGRQMIM+L Sbjct: 61 LIRFLESGNKTKVSLRFRGREMAHQDLGLKLLERVAADLDELSSVEQRPKKEGRQMIMVL 120 Query: 132 SS 133 + Sbjct: 121 AP 122 >gi|171779891|ref|ZP_02920795.1| hypothetical protein STRINF_01678 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281239|gb|EDT46674.1| hypothetical protein STRINF_01678 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 176 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|270292937|ref|ZP_06199148.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Streptococcus sp. M143] gi|270278916|gb|EFA24762.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Streptococcus sp. M143] Length = 181 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 46 LADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 105 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 106 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 165 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 166 DGRQMFMQLAP 176 >gi|126659821|ref|ZP_01730947.1| initiation factor IF-3 [Cyanothece sp. CCY0110] gi|126618878|gb|EAZ89621.1| initiation factor IF-3 [Cyanothece sp. CCY0110] Length = 183 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQE LDLVE+ + +P VCKI+D K +Y +QK A+K + +KEVK+R Sbjct: 50 IDIAQEVGLDLVEVAPNASPPVCKIIDYGKFKYELQKKESLAKKNRTENTLKEVKLRYCT 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D DL KL+ FL +G KVK S++FRGRE LGRE L NI +R +++ D Sbjct: 110 DTGDLNTKLRQARKFLENGSKVKFSMRFRGRERAFMKLGREKLDNIVDRLSDVANQDGNS 169 Query: 121 KFEGRQMIMILSS 133 + G Q+ +IL Sbjct: 170 NYNGHQLSIILEP 182 >gi|163782696|ref|ZP_02177692.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] gi|159881817|gb|EDP75325.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] Length = 175 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRP 58 +++A+E LDLVEI P VCKI+D K +Y ++K EARKKQK +K+++M+ Sbjct: 37 LKLAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREARKKQKEHQIEVKDIRMKV 96 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL DG KV++ ++FRGRE +H +LG +L I E G++ ++ Sbjct: 97 RIDEHDLKVKLKHMREFLEDGDKVRVRIRFRGRENIHPELGEKLFKKIVEELGDVGEVEV 156 Query: 119 EPKFEGRQMIMILSSKC 135 +PK EG ++ L+ K Sbjct: 157 KPKKEGPFLLFTLAPKK 173 >gi|296113665|ref|YP_003627603.1| translation initiation factor IF-3 [Moraxella catarrhalis RH4] gi|295921359|gb|ADG61710.1| translation initiation factor IF-3 [Moraxella catarrhalis RH4] gi|326562409|gb|EGE12728.1| translation initiation factor IF-3 [Moraxella catarrhalis 7169] gi|326562778|gb|EGE13073.1| translation initiation factor IF-3 [Moraxella catarrhalis 46P47B1] gi|326563182|gb|EGE13450.1| translation initiation factor IF-3 [Moraxella catarrhalis 12P80B1] gi|326563500|gb|EGE13763.1| translation initiation factor IF-3 [Moraxella catarrhalis 103P14B1] gi|326569117|gb|EGE19179.1| translation initiation factor IF-3 [Moraxella catarrhalis BC1] gi|326570603|gb|EGE20639.1| translation initiation factor IF-3 [Moraxella catarrhalis BC7] gi|326571310|gb|EGE21327.1| translation initiation factor IF-3 [Moraxella catarrhalis BC8] gi|326572995|gb|EGE22974.1| translation initiation factor IF-3 [Moraxella catarrhalis CO72] gi|326573809|gb|EGE23766.1| translation initiation factor IF-3 [Moraxella catarrhalis 101P30B1] gi|326574767|gb|EGE24701.1| translation initiation factor IF-3 [Moraxella catarrhalis O35E] Length = 146 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A + NLDLVEI + P VCKI+D ++ Y ++ A EA+K QK T ++E+K+RP Sbjct: 10 LKAALDVNLDLVEIVADAKPPVCKIMDYKRYLYEQKQKAKEAKKNQKQTQVREIKLRPGT 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL + KVKIS++FRGRE+ HQ++G+ L I E EI+ ++ P Sbjct: 70 EEADYQVKLRKIVEFLENKDKVKISIRFRGREMAHQEIGKAQLDRIIEDTAEIAIVEQAP 129 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 130 KVEGRQMGMLLGP 142 >gi|296876708|ref|ZP_06900756.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 15912] gi|322389274|ref|ZP_08062834.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 903] gi|296432210|gb|EFH18009.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 15912] gi|321144018|gb|EFX39436.1| translation initiation factor IF3 [Streptococcus parasanguinis ATCC 903] Length = 185 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|312867797|ref|ZP_07728003.1| translation initiation factor IF-3 [Streptococcus parasanguinis F0405] gi|311096860|gb|EFQ55098.1| translation initiation factor IF-3 [Streptococcus parasanguinis F0405] Length = 176 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +++ I+ K Sbjct: 101 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|187736220|ref|YP_001878332.1| translation initiation factor IF-3 [Akkermansia muciniphila ATCC BAA-835] gi|187426272|gb|ACD05551.1| translation initiation factor IF-3 [Akkermansia muciniphila ATCC BAA-835] Length = 212 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVE+ + P VC+++D K +Y K K ++ +KE+K+R Sbjct: 51 LEKAKALGLDLVEVAGNADPPVCRVVDYGKYKYQQAKLQKNN--KSRTVKLKEIKLRIGT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D VK+ + FL G KV+ ++FRGRE HQ+LG ++ + + ++++D P Sbjct: 109 DTNDYNVKMARTESFLDHGHKVRFQLRFRGRENAHQELGYDVFNKVIADMKTMAQVDQAP 168 Query: 121 KFEGRQMIMILSS 133 + G M M+LS Sbjct: 169 RLAGNTMHMVLSP 181 >gi|327489894|gb|EGF21683.1| translation initiation factor IF3 [Streptococcus sanguinis SK1058] gi|332361940|gb|EGJ39742.1| translation initiation factor IF3 [Streptococcus sanguinis SK49] Length = 185 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G K+K+S++F+GR I H+++G ++L++ E +++ I+ +PK Sbjct: 110 GDFDTKLRNARKFLEKGNKIKVSIRFKGRMITHKEIGAKVLADFAEATQDVAIIEQKPKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M ++ Sbjct: 170 DGRQMFMQMAP 180 >gi|37526559|ref|NP_929903.1| translation initiation factor IF-3 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785990|emb|CAE15042.1| translation initiation factor IF-3 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 141 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E +DLVEI + P VC+++D K Y K+ E +KKQK T +KEVK RP Sbjct: 5 LEKAKEEGVDLVEISPNAEPPVCRLMDYGKFLYEKSKSTKEQKKKQKVTKVKEVKFRPGT 64 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVK+ + FL + K K++++FRGRE+ HQ +G E+L ++ ++ ++ P Sbjct: 65 EEGDYQVKIGNLKRFLENSDKAKVTLRFRGREMAHQQIGIEMLDKVRNDLDGLAVVESFP 124 Query: 121 -KFEGRQMIMILSSKC 135 K EGRQM+M+L+ K Sbjct: 125 SKIEGRQMVMVLAPKK 140 >gi|320528351|ref|ZP_08029513.1| translation initiation factor IF-3 [Solobacterium moorei F0204] gi|320131265|gb|EFW23833.1| translation initiation factor IF-3 [Solobacterium moorei F0204] Length = 182 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDL+ + + VCKILD + + QK EA+K Q T +K +++ PVI Sbjct: 46 LEKAYSMELDLMCVAPNAPVPVCKILDYGRYHFEDQKKQREAKKNQHVTEVKALRLSPVI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK ++ G KV+I ++FRGR I Q++GR++L+ E+ +I+ + Sbjct: 106 DQHDFETKLKRSREWIEAGQKVRIDMRFRGRMITRQEVGRDVLNKFTEQISDIADVSKSA 165 Query: 121 KFEGRQMIMILSSKC 135 EG + ++ S K Sbjct: 166 AMEGNTLSVVYSPKK 180 >gi|319938145|ref|ZP_08012543.1| translation initiation factor IF-3 [Coprobacillus sp. 29_1] gi|319806666|gb|EFW03315.1| translation initiation factor IF-3 [Coprobacillus sp. 29_1] Length = 180 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A ANLDLV + VC+I+D K R+ QK E +K K +KE ++ P I Sbjct: 45 LHTASNANLDLVCVAPKAATPVCRIMDYGKYRFEQQKKQKEMKKNSKVVSLKETQLSPTI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD VKLK L G KVK++V+FRGR++ H D+G+++L + + ++ Sbjct: 105 DVHDKNVKLKRTIKMLEAGDKVKVAVRFRGRQLAHIDIGQKILEDFVAECADYCIVEKPA 164 Query: 121 KFEGRQMIMILSSKC 135 K EGR +I IL+ K Sbjct: 165 KMEGRTLIAILAPKK 179 >gi|262276750|ref|ZP_06054543.1| translation initiation factor IF-3 [alpha proteobacterium HIMB114] gi|262223853|gb|EEY74312.1| translation initiation factor IF-3 [alpha proteobacterium HIMB114] Length = 167 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E LDL+E+ + P VCKI+D K +Y IQK A +A+KKQK +KE+K+RP Sbjct: 34 LDRAKEVGLDLIEVAPNAKPPVCKIIDYGKYKYEIQKKASQAKKKQKVITLKELKLRPST 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K F+ G KVK +++F+GRE+ + +L+ I E +IS+++ + Sbjct: 94 DKHDYDFKMKNAKKFISKGDKVKFTIRFKGREMDYMKAAYDLVDKIIEDTKDISKVEQKA 153 Query: 121 KFEGRQMIMILSS 133 K EGRQM MI+ Sbjct: 154 KMEGRQMTMIIQP 166 >gi|320547007|ref|ZP_08041308.1| translation initiation factor IF3 [Streptococcus equinus ATCC 9812] gi|320448409|gb|EFW89151.1| translation initiation factor IF3 [Streptococcus equinus ATCC 9812] Length = 176 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V +I+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVARIMDYGKFKFEYQKKRKEQRKKQAVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ ER +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAERTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|146318924|ref|YP_001198636.1| translation initiation factor IF-3 [Streptococcus suis 05ZYH33] gi|146321131|ref|YP_001200842.1| translation initiation factor IF-3 [Streptococcus suis 98HAH33] gi|253751998|ref|YP_003025139.1| translation initiation factor IF-3 [Streptococcus suis SC84] gi|253753823|ref|YP_003026964.1| translation initiation factor IF-3 [Streptococcus suis P1/7] gi|253755301|ref|YP_003028441.1| translation initiation factor IF-3 [Streptococcus suis BM407] gi|330832531|ref|YP_004401356.1| translation initiation factor IF-3 [Streptococcus suis ST3] gi|145689730|gb|ABP90236.1| translation initiation factor IF-3 [Streptococcus suis 05ZYH33] gi|145691937|gb|ABP92442.1| translation initiation factor IF-3 [Streptococcus suis 98HAH33] gi|251816287|emb|CAZ51915.1| translation initiation factor IF-3 [Streptococcus suis SC84] gi|251817765|emb|CAZ55517.1| translation initiation factor IF-3 [Streptococcus suis BM407] gi|251820069|emb|CAR46325.1| translation initiation factor IF-3 [Streptococcus suis P1/7] gi|292558580|gb|ADE31581.1| translation initiation factor IF-3 [Streptococcus suis GZ1] gi|319758364|gb|ADV70306.1| translation initiation factor IF-3 [Streptococcus suis JS14] gi|329306754|gb|AEB81170.1| translation initiation factor IF-3 [Streptococcus suis ST3] Length = 168 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 33 IADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 92 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 93 GDFETKLRHARKFLEKGNKVKVSIRFKGRMITHKEVGAKVLAEFAEATQDIAIIEQRAKM 152 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 153 DGRQMFMQLAP 163 >gi|315221378|ref|ZP_07863299.1| translation initiation factor IF-3 [Streptococcus anginosus F0211] gi|315189497|gb|EFU23191.1| translation initiation factor IF-3 [Streptococcus anginosus F0211] Length = 185 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 IADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ + +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAQATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|148244739|ref|YP_001219433.1| translation initiation factor IF-3 [Candidatus Vesicomyosocius okutanii HA] gi|146326566|dbj|BAF61709.1| translation initiation factor IF-3 [Candidatus Vesicomyosocius okutanii HA] Length = 149 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q A ++ LDLVE+ S P VCKI+D K Y +++ EA+KKQK +K +K RP + Sbjct: 13 QEAIQSELDLVEVSPSAQPPVCKIMDFGKFLYGLKQQKKEAKKKQKRNTVKTIKYRPGTE 72 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D Q+K + + FL +G KVK+ + FRGRE+ H++LG ++L I++ + + ++ + K Sbjct: 73 ESDYQIKFRNLVKFLDNGDKVKVGIWFRGREMQHKELGMKMLDRIEKDTEDFANVEQKAK 132 Query: 122 FEGRQMIMILSSKC 135 EGRQ+ M+L+ K Sbjct: 133 MEGRQLGMMLAPKS 146 >gi|78776268|ref|YP_392583.1| translation initiation factor IF-3 [Sulfurimonas denitrificans DSM 1251] gi|123754759|sp|Q30UI3|IF3_SULDN RecName: Full=Translation initiation factor IF-3 gi|78496808|gb|ABB43348.1| bacterial translation initiation factor 3 (bIF-3) [Sulfurimonas denitrificans DSM 1251] Length = 172 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 69/133 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A E LDLV I P V KI+D K RY ++ E +K Q +KE+K+ I Sbjct: 38 MERANELGLDLVLIAPDAKPPVAKIMDYGKYRYQEERKLKEQKKNQVKIDVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G VK V +GRE+ + + +++L + ++ +D EP Sbjct: 98 AENDINYKVKHAREFLAEGKHVKFRVFLKGREMANPESAKDVLLRVWAMIEDVGVMDKEP 157 Query: 121 KFEGRQMIMILSS 133 KFEGR M + Sbjct: 158 KFEGRYYNMYVLP 170 >gi|51210011|ref|YP_063675.1| translation initiation factor 3 [Gracilaria tenuistipitata var. liui] gi|68052104|sp|Q6B8N5|IF3C_GRATL RecName: Full=Translation initiation factor IF-3, chloroplastic gi|50657765|gb|AAT79750.1| translation initiation factor 3 [Gracilaria tenuistipitata var. liui] Length = 181 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 82/136 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A LDLV I P VC+I+D K ++ +K A EA+KKQ + IKEVKMR I Sbjct: 46 LTIALNAGLDLVLISEKSNPPVCRIIDYGKYKFAQEKKAKEAKKKQHNVTIKEVKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD V++ FL+ G KVK +V FRGREI H L ELL+ + + IS I P Sbjct: 106 DVHDYNVRINQAFRFLQGGDKVKANVIFRGREIQHTKLAIELLNKMAQDLSHISEIQQPP 165 Query: 121 KFEGRQMIMILSSKCV 136 +G+ MIMILS K + Sbjct: 166 AKDGKNMIMILSPKKI 181 >gi|254515028|ref|ZP_05127089.1| translation initiation factor IF-3 [gamma proteobacterium NOR5-3] gi|219677271|gb|EED33636.1| translation initiation factor IF-3 [gamma proteobacterium NOR5-3] Length = 154 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 79/126 (62%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I P VCK++D K + +K +KKQK T +KE+K RP + D QVK Sbjct: 25 MDLVLIADQSDPMVCKVMDYGKHIFEAKKQKNAQKKKQKRTQLKEMKFRPGTEEGDYQVK 84 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQM Sbjct: 85 LRNLVRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQMT 144 Query: 129 MILSSK 134 M+++ K Sbjct: 145 MVIAPK 150 >gi|254974299|ref|ZP_05270771.1| translation initiation factor IF-3 [Clostridium difficile QCD-66c26] gi|255091696|ref|ZP_05321174.1| translation initiation factor IF-3 [Clostridium difficile CIP 107932] gi|255099797|ref|ZP_05328774.1| translation initiation factor IF-3 [Clostridium difficile QCD-63q42] gi|255305682|ref|ZP_05349854.1| translation initiation factor IF-3 [Clostridium difficile ATCC 43255] gi|255313424|ref|ZP_05355007.1| translation initiation factor IF-3 [Clostridium difficile QCD-76w55] gi|255516111|ref|ZP_05383787.1| translation initiation factor IF-3 [Clostridium difficile QCD-97b34] gi|255649207|ref|ZP_05396109.1| translation initiation factor IF-3 [Clostridium difficile QCD-37x79] gi|255654726|ref|ZP_05400135.1| translation initiation factor IF-3 [Clostridium difficile QCD-23m63] gi|260682382|ref|YP_003213667.1| translation initiation factor IF-3 [Clostridium difficile CD196] gi|260685981|ref|YP_003217114.1| translation initiation factor IF-3 [Clostridium difficile R20291] gi|296449469|ref|ZP_06891249.1| translation initiation factor IF3 [Clostridium difficile NAP08] gi|296878208|ref|ZP_06902220.1| translation initiation factor IF3 [Clostridium difficile NAP07] gi|306519311|ref|ZP_07405658.1| translation initiation factor IF-3 [Clostridium difficile QCD-32g58] gi|260208545|emb|CBA61206.1| translation initiation factor IF-3 [Clostridium difficile CD196] gi|260211997|emb|CBE02531.1| translation initiation factor IF-3 [Clostridium difficile R20291] gi|296261708|gb|EFH08523.1| translation initiation factor IF3 [Clostridium difficile NAP08] gi|296430777|gb|EFH16612.1| translation initiation factor IF3 [Clostridium difficile NAP07] Length = 141 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 9 MANSKNLDLVQISPNANPPVCKIMDYGKFRYEQARKEKEAKKKQKTIVVKEVRLRPGIEQ 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ + E P F Sbjct: 69 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFLDIIKEFGEPTKAPAF 128 Query: 123 EGRQMIMILSSKC 135 EG M++I+ K Sbjct: 129 EGNNMVVIIDPKK 141 >gi|71066653|ref|YP_265380.1| translation initiation factor 3 [Psychrobacter arcticus 273-4] gi|93007242|ref|YP_581679.1| translation initiation factor IF-3 [Psychrobacter cryohalolentis K5] gi|71039638|gb|AAZ19946.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter arcticus 273-4] gi|92394920|gb|ABE76195.1| bacterial translation initiation factor 3 (bIF-3) [Psychrobacter cryohalolentis K5] Length = 167 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 88/133 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+E +LDLVE+ P VCKI+D + Y ++ A EA+K QK T +KE+K+RP Sbjct: 31 MKAAREDSLDLVELVPEAKPPVCKIMDYKHFLYDQKQKAKEAKKNQKQTQLKEMKLRPST 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ I FL D KVKIS++FRGRE+ HQ++GR+ L I E +IS ++ P Sbjct: 91 EEADYQVKLRKIVSFLEDQDKVKISIRFRGREMAHQEIGRKQLDRIIEDTADISNVEQYP 150 Query: 121 KFEGRQMIMILSS 133 K EGRQM M+L Sbjct: 151 KMEGRQMGMLLGP 163 >gi|188996618|ref|YP_001930869.1| translation initiation factor IF-3 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931685|gb|ACD66315.1| translation initiation factor IF-3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 168 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 84/135 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLVE+ + P VCKI+D K ++ +K EA+KKQ +KE+K + I Sbjct: 34 LRLAREKNLDLVEVSPNANPPVCKIMDYGKYKFEQKKKEKEAKKKQHVQDVKEMKFKLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + K+K I F++DG KV++ + FRGRE +H +LG +L I E +I+ ++ P Sbjct: 94 EKHDYETKIKHIRDFIQDGDKVRVWIWFRGRENVHPELGDKLAQRIIEDVSDIAVVEKPP 153 Query: 121 KFEGRQMIMILSSKC 135 EG+ M+ L K Sbjct: 154 VKEGKNMMFTLIPKK 168 >gi|288905560|ref|YP_003430782.1| Translation initiation factor IF-3 [Streptococcus gallolyticus UCN34] gi|306831648|ref|ZP_07464805.1| translation initiation factor IF3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306833790|ref|ZP_07466915.1| translation initiation factor IF3 [Streptococcus bovis ATCC 700338] gi|325978551|ref|YP_004288267.1| translation initiation factor IF-3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732286|emb|CBI13853.1| Translation initiation factor IF-3 [Streptococcus gallolyticus UCN34] gi|304423984|gb|EFM27125.1| translation initiation factor IF3 [Streptococcus bovis ATCC 700338] gi|304426073|gb|EFM29188.1| translation initiation factor IF3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178479|emb|CBZ48523.1| Translation initiation factor IF-3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 176 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 57/131 (43%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ ER +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAERTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|322392247|ref|ZP_08065708.1| translation initiation factor IF3 [Streptococcus peroris ATCC 700780] gi|321144782|gb|EFX40182.1| translation initiation factor IF3 [Streptococcus peroris ATCC 700780] Length = 185 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|126698264|ref|YP_001087161.1| translation initiation factor IF-3 [Clostridium difficile 630] gi|115249701|emb|CAJ67518.1| Translation initiation factor IF-3 [Clostridium difficile] Length = 169 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 37 MANSKNLDLVQISPNANPPVCKIMDYGKFRYEQARKEKEAKKKQKTIVVKEVRLRPGIEQ 96 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ + E P F Sbjct: 97 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFLDIIKEFGEPTKAPAF 156 Query: 123 EGRQMIMILSSKC 135 EG M++I+ K Sbjct: 157 EGNNMVVIIDPKK 169 >gi|15807081|ref|NP_295810.1| translation initiation factor IF-3 [Deinococcus radiodurans R1] gi|14194841|sp|Q9RSN7|IF3_DEIRA RecName: Full=Translation initiation factor IF-3 gi|6459878|gb|AAF11633.1|AE002044_6 initiation factor 3 [Deinococcus radiodurans R1] Length = 212 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 69/120 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA+E +LDLV + P VC++LD + RY Q+N E RK+ +S +K +K R I Sbjct: 38 MNMAREKSLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRARSQEVKAIKFRVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D + K + FL +G KVK+++ FRGRE H +LG +L + E ++ + P Sbjct: 98 DDNDFKTKTGHVRRFLNEGHKVKVTIMFRGRERTHPELGERILVRVAETLADVGAPEGNP 157 >gi|206895742|ref|YP_002246953.1| translation initiation factor IF-3 [Coprothermobacter proteolyticus DSM 5265] gi|206738359|gb|ACI17437.1| translation initiation factor IF-3 [Coprothermobacter proteolyticus DSM 5265] Length = 183 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 83/135 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+ DLVE+ + P VC+ +D K RY + K A EA++ Q +KE+++R Sbjct: 29 IRMARSRGYDLVEVAPTADPPVCRFIDYDKFRYEMAKKAKEAKRNQTIIEVKEIRLRLGT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HD++ K+K I FL +G KVK++++ RGRE ++ R+ L +I E+ ++ +++ + Sbjct: 89 DVHDMETKMKKIREFLEEGNKVKVTLRPRGRERALEEQIRQKLLSIAEKLSDVGQVEQDV 148 Query: 121 KFEGRQMIMILSSKC 135 + EGR +++ K Sbjct: 149 RAEGRNFYFMIAPKK 163 >gi|28211883|ref|NP_782827.1| translation initiation factor IF-3 [Clostridium tetani E88] gi|39931275|sp|Q891T1|IF3_CLOTE RecName: Full=Translation initiation factor IF-3 gi|28204326|gb|AAO36764.1| bacterial protein translation initiation factor 3 [Clostridium tetani E88] Length = 173 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDLV I + P VCKI++ K Y K EA+KKQK +KE+++ I Sbjct: 38 LKRAEEKELDLVMIAPTGKPPVCKIMNYGKFIYEQTKKDKEAKKKQKVINVKEIRLSATI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCE 119 + HD+ +K FL+ KVK++V+FRGRE+ H + +G ++L + ++ ++ Sbjct: 98 EEHDIGIKANNARKFLKAEDKVKVTVRFRGREMEHSNVVGNKILKTFLSKVEDVCVVEKP 157 Query: 120 PKFEGRQMIMILSSKC 135 + EG+ M M+L+ + Sbjct: 158 ARLEGKNMTMVLAPRK 173 >gi|261493661|ref|ZP_05990180.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494328|ref|ZP_05990822.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309977|gb|EEY11186.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310661|gb|EEY11845.1| translation initiation factor IF-3 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 129 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+I++ K Y +K A E +KKQK +KE+K RP D D QVK Sbjct: 1 MDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDDGDYQVK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 L++I FL DG KVKI+V+FRGRE+ HQ++G ++L +K EI+ ++ P K EGRQ+ Sbjct: 61 LRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVESAPGKLEGRQV 120 Query: 128 IMILSSKC 135 +M+++ K Sbjct: 121 VMVIAPKK 128 >gi|254282514|ref|ZP_04957482.1| translation initiation factor IF-3 [gamma proteobacterium NOR51-B] gi|219678717|gb|EED35066.1| translation initiation factor IF-3 [gamma proteobacterium NOR51-B] Length = 155 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV + TP VCKI+D K + +K RKK K +KE+K RP D D QV Sbjct: 27 GMDLVMMA-DSTPPVCKIMDYGKHVFEAKKQKAAQRKKAKRIQVKEMKFRPGTDEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K+++++RGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLVRFLENGDKAKVTLRYRGREMAHQEIGMELLKRVENDLSELGSVEQFPKMEGRQL 145 Query: 128 IMILSSKC 135 M+++ K Sbjct: 146 TMVIAPKK 153 >gi|183603637|ref|ZP_02718531.2| translation initiation factor IF-3 [Streptococcus pneumoniae CDC3059-06] gi|183575708|gb|EDT96236.1| translation initiation factor IF-3 [Streptococcus pneumoniae CDC3059-06] Length = 185 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQ+ M L+ Sbjct: 170 DGRQIFMQLAP 180 >gi|260494365|ref|ZP_05814496.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_33] gi|260198511|gb|EEW96027.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_33] Length = 180 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ ++ Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEVEK-- 163 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 164 KYADKQKHLILSPKKI 179 >gi|326795751|ref|YP_004313571.1| translation initiation factor IF-3 [Marinomonas mediterranea MMB-1] gi|326546515|gb|ADZ91735.1| Translation initiation factor IF-3 [Marinomonas mediterranea MMB-1] Length = 177 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + ++ A LDLV+I P VCKI+D K + +K +K K +KE+K RP Sbjct: 42 LDASRAAALDLVQIA-DSDPIVCKIMDYGKHVFEQKKAKAAQKKNAKQIQVKEMKFRPGT 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K+S+++RGRE+ HQ+LG +L++ + + E ++ Sbjct: 101 EEGDYQVKLRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMNRVAQDLEEYGVVEQAA 160 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+ M+L+ K Sbjct: 161 KMEGRQLTMVLAPKK 175 >gi|319946723|ref|ZP_08020957.1| translation initiation factor IF3 [Streptococcus australis ATCC 700641] gi|319746771|gb|EFV99030.1| translation initiation factor IF3 [Streptococcus australis ATCC 700641] Length = 185 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|254302740|ref|ZP_04970098.1| initiation factor IF3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322932|gb|EDK88182.1| initiation factor IF3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 182 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 48 LNLATSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ ++ Sbjct: 108 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEVEK-- 165 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 166 KYADKQKHLILSPKKI 181 >gi|309800229|ref|ZP_07694408.1| translation initiation factor IF-3 [Streptococcus infantis SK1302] gi|308116137|gb|EFO53634.1| translation initiation factor IF-3 [Streptococcus infantis SK1302] Length = 185 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EAN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADEANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 110 GDFETKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|172039441|ref|YP_001805942.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] gi|171700895|gb|ACB53876.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142] Length = 183 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 79/133 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQEA LDLVE+ + +P VCKI+D K +Y +QK A+K + +KEVK+R Sbjct: 50 IDIAQEAGLDLVEVAPNASPPVCKIIDYGKFKYELQKKESLAKKNRTENTLKEVKLRYCT 109 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D DL KL+ FL +G KVK S++FRGRE LGRE L +I +R +++ D Sbjct: 110 DTGDLNTKLRQARKFLNNGSKVKFSMRFRGRERAFMKLGREKLDHIVDRLSDVASQDGNS 169 Query: 121 KFEGRQMIMILSS 133 + G Q+ +IL Sbjct: 170 NYNGHQLSIILEP 182 >gi|288818072|ref|YP_003432420.1| translation initiation factor 3 [Hydrogenobacter thermophilus TK-6] gi|288787472|dbj|BAI69219.1| translation initiation factor 3 [Hydrogenobacter thermophilus TK-6] gi|308751674|gb|ADO45157.1| translation initiation factor IF-3 [Hydrogenobacter thermophilus TK-6] Length = 172 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 +++A+E LDLVEI P VCKILD K Y +K A+KKQ + +K++++ Sbjct: 34 LKLAEEKGLDLVEIAPQANPPVCKILDYGKFVYEQKKKEKVAKKKQREHAIEVKDIQLST 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HDL+VKLK + FL +G KV+I ++FRGRE +H +LG L+ I E +I +I+ Sbjct: 94 RIDEHDLKVKLKHMREFLEEGDKVRIRIRFRGREHIHPELGDRLVQRILEELSDIGKIES 153 Query: 119 EPKFEGRQMIMILSS 133 EPK EG ++ L Sbjct: 154 EPKKEGAFLMFSLLP 168 >gi|119505272|ref|ZP_01627347.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2080] gi|119458963|gb|EAW40063.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2080] Length = 155 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV + P VCK++D K + +K RKK K +KE+K RP D D QV Sbjct: 27 GMDLVLMA-ESDPPVCKVMDYGKHVFEAKKQKAAQRKKTKRIQVKEMKFRPGTDEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K+++++RGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLVRFLENGDKAKVTLRYRGREMAHQEIGMELLKRVEADLSELGNVEQFPKMEGRQL 145 Query: 128 IMILSSKC 135 M+++ K Sbjct: 146 TMVIAPKK 153 >gi|254785571|ref|YP_003073000.1| translation initiation factor IF-3 [Teredinibacter turnerae T7901] gi|237687414|gb|ACR14678.1| translation initiation factor IF-3 [Teredinibacter turnerae T7901] Length = 143 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 89/135 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ A+LDLVEI S P VCKI+D K + I+K A+KKQK +KE+K RP Sbjct: 7 LEAAQAASLDLVEIASEAEPIVCKIMDYGKHLFEIKKQKAAAKKKQKQQQVKEMKFRPGT 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D +VKL+ + F+ G K K+S+++RGRE+ HQ+LG E++ I+ EI+ ++ P Sbjct: 67 EEGDYKVKLRNLQRFIEHGDKAKVSLRYRGREMAHQELGMEMMKRIEVDLDEIASVEQYP 126 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ+IM+L+ K Sbjct: 127 KMEGRQLIMVLAPKK 141 >gi|116627860|ref|YP_820479.1| translation initiation factor IF-3 [Streptococcus thermophilus LMD-9] gi|122267543|sp|Q03KI9|IF3_STRTD RecName: Full=Translation initiation factor IF-3 gi|116101137|gb|ABJ66283.1| bacterial translation initiation factor 3 (bIF-3) [Streptococcus thermophilus LMD-9] gi|312278441|gb|ADQ63098.1| translation initiation factor IF-3 [Streptococcus thermophilus ND03] Length = 176 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMNYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++FRGR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFRGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|15895628|ref|NP_348977.1| translation initiation factor IF-3 [Clostridium acetobutylicum ATCC 824] gi|20138499|sp|Q97GK5|IF3_CLOAB RecName: Full=Translation initiation factor IF-3 gi|15025372|gb|AAK80317.1|AE007736_7 Translation initiation factor IF3 [Clostridium acetobutylicum ATCC 824] gi|325509776|gb|ADZ21412.1| translation initiation factor IF-3 [Clostridium acetobutylicum EA 2018] Length = 175 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV + + P VCKI+D K Y K E +K QK +KEV++ I Sbjct: 40 LKLAEEKELDLVAMSPNAVPPVCKIMDFGKFVYEQTKKEKENKKNQKIVNVKEVRLSASI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD+Q+K FL G KVK++V+FRGR+ + GR++L N E+ ++ I+ Sbjct: 100 EEHDVQIKSNNARKFLIAGDKVKVAVRFRGRQTDYAFKGRKILDNFFEKINDVGVIEKPA 159 Query: 121 KFEGRQMIMILSSKCV 136 K EG+ MIMIL+ K Sbjct: 160 KLEGKNMIMILAPKKA 175 >gi|212697335|ref|ZP_03305463.1| hypothetical protein ANHYDRO_01904 [Anaerococcus hydrogenalis DSM 7454] gi|212675784|gb|EEB35391.1| hypothetical protein ANHYDRO_01904 [Anaerococcus hydrogenalis DSM 7454] Length = 188 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + +LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I Sbjct: 51 LDRAYDKHLDLVLMSPNAKPPVARIMDYGKFKYEQEKKAKENKKKQKTTQTKETRFSLNI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K FL +G KVK+SV+F+GRE+ H++LG +LL E G+ +++D +P Sbjct: 111 EDHDLETKANHTKKFLNNGDKVKVSVRFKGRELGHKNLGYDLLDKFMEFVGDCAQVDKKP 170 Query: 121 KFEGRQMIMILSSKC 135 EGR +++ +S Sbjct: 171 AMEGRSLVLFISPNT 185 >gi|237821900|ref|ZP_04597745.1| translation initiation factor IF-3 [Streptococcus pneumoniae CCRI 1974M2] Length = 185 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 77/131 (58%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ P ID Sbjct: 50 LADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPTIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL+ FL G KVK+S++F+GR I ++++G ++L+ E +I+ I+ K Sbjct: 110 GDFDTKLRNARKFLEKGNKVKVSIRFKGRMITNKEIGAKVLAEFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|210623616|ref|ZP_03293942.1| hypothetical protein CLOHIR_01892 [Clostridium hiranonis DSM 13275] gi|210153486|gb|EEA84492.1| hypothetical protein CLOHIR_01892 [Clostridium hiranonis DSM 13275] Length = 141 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 79/133 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A NLDLV I + P VCKI+D K RY + EA+KKQK+ +KEV++RP I+ Sbjct: 9 LANNKNLDLVLISPNAKPPVCKIMDYGKYRYEQARKEKEAKKKQKTVNVKEVRLRPGIEQ 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K K FL G KVK+ ++FRGRE+ H+DLG++++ E E P F Sbjct: 69 NDLNTKAKQAMKFLSKGDKVKVELRFRGRELGHKDLGKDVMLKFIEAVKEFGEPAKAPTF 128 Query: 123 EGRQMIMILSSKC 135 EG M++I+ K Sbjct: 129 EGNNMVVIIDPKK 141 >gi|326792021|ref|YP_004309842.1| translation initiation factor IF-3 [Clostridium lentocellum DSM 5427] gi|326542785|gb|ADZ84644.1| Translation initiation factor IF-3 [Clostridium lentocellum DSM 5427] Length = 170 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 81/133 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA E NLDLV+I P VCKI+D K ++ K EARKKQK +KEV++ I+ Sbjct: 38 KMAAEKNLDLVKIAPQAKPPVCKIMDYGKYKFDAAKKEKEARKKQKVVSVKEVRLSASIE 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K+K FL+ G KVKISV FRGRE+MH G ELL E+ + +PK Sbjct: 98 KHDFETKMKNAAKFLKAGDKVKISVVFRGREMMHTHRGNELLEQAIALVEEVGVAEQKPK 157 Query: 122 FEGRQMIMILSSK 134 EGR M+++++ K Sbjct: 158 LEGRAMVIVVAPK 170 >gi|322388183|ref|ZP_08061787.1| translation initiation factor IF3 [Streptococcus infantis ATCC 700779] gi|321140855|gb|EFX36356.1| translation initiation factor IF3 [Streptococcus infantis ATCC 700779] Length = 185 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 50 LADDANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 109 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D KL++ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 110 GDFDTKLRSARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 169 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 170 DGRQMFMQLAP 180 >gi|332830448|gb|EGK03076.1| hypothetical protein HMPREF9455_01326 [Dysgonomonas gadei ATCC BAA-286] Length = 210 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 74/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A + LDLVEI + P VC+I D +K Y +K EA+ K +KE++ P Sbjct: 43 LRLADDLELDLVEISPTADPPVCRITDYQKFLYQQKKKQKEAKAKSVKVVVKEIRFGPQT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KL FL +G KVK V F+GR I+ ++ G LL ++ ++D P Sbjct: 103 DDHDFNFKLNHAKNFLEEGAKVKAYVFFKGRSILFKEQGEVLLLRFATELEDLGKVDQLP 162 Query: 121 KFEGRQMIMILSSKC 135 EG++MIM+LS K Sbjct: 163 ALEGKKMIMMLSPKK 177 >gi|77414730|ref|ZP_00790859.1| translation initiation factor IF-3 [Streptococcus agalactiae 515] gi|77159216|gb|EAO70398.1| translation initiation factor IF-3 [Streptococcus agalactiae 515] Length = 187 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 52 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKXQKEQRKKQSVVTVKEVRLSPVIDK 111 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 112 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 171 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 172 DGRQMFMQLAP 182 >gi|77409877|ref|ZP_00786502.1| translation initiation factor IF-3 [Streptococcus agalactiae COH1] gi|77171512|gb|EAO74756.1| translation initiation factor IF-3 [Streptococcus agalactiae COH1] Length = 187 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 52 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 111 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 112 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 171 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 172 DGRQMFMQLAP 182 >gi|261749265|ref|YP_003256950.1| translation initiation factor 3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497357|gb|ACX83807.1| translation initiation factor 3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 167 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A++ LDLVEI+ V P VCKILD +K Y +K + + KQ KE++ P I Sbjct: 32 LQFARDKELDLVEINPKVDPPVCKILDYKKFLYEQKKKKKQFKAKQIKVNTKEIRFGPQI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +VK+K+ + FL G KVK+ V F+GR I+++D G+ L E E +++ P Sbjct: 92 GDHDGKVKIKSAEKFLMRGDKVKVFVFFKGRSIVYKDQGKIKLLKFAEEIEEYGKVEQMP 151 Query: 121 KFEGRQMIMILSSKC 135 EG++M MIL+ K Sbjct: 152 VMEGKRMYMILAPKK 166 >gi|22537531|ref|NP_688382.1| translation initiation factor IF-3 [Streptococcus agalactiae 2603V/R] gi|25011496|ref|NP_735891.1| translation initiation factor IF-3 [Streptococcus agalactiae NEM316] gi|76788706|ref|YP_330025.1| translation initiation factor IF-3 [Streptococcus agalactiae A909] gi|76797725|ref|ZP_00779993.1| translation initiation factor IF-3 [Streptococcus agalactiae 18RS21] gi|77407201|ref|ZP_00784175.1| translation initiation factor IF-3 [Streptococcus agalactiae H36B] gi|54037392|sp|P65143|IF3_STRA5 RecName: Full=Translation initiation factor IF-3 gi|54041113|sp|P65142|IF3_STRA3 RecName: Full=Translation initiation factor IF-3 gi|123601579|sp|Q3K0C8|IF3_STRA1 RecName: Full=Translation initiation factor IF-3 gi|22534412|gb|AAN00255.1|AE014255_13 translation initiation factor IF-3 [Streptococcus agalactiae 2603V/R] gi|24413034|emb|CAD47113.1| translation initiation factor IF-3 [Streptococcus agalactiae NEM316] gi|76563763|gb|ABA46347.1| translation initiation factor IF-3 [Streptococcus agalactiae A909] gi|76586949|gb|EAO63439.1| translation initiation factor IF-3 [Streptococcus agalactiae 18RS21] gi|77174192|gb|EAO77087.1| translation initiation factor IF-3 [Streptococcus agalactiae H36B] gi|319745336|gb|EFV97651.1| translation initiation factor IF3 [Streptococcus agalactiae ATCC 13813] Length = 176 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|256545525|ref|ZP_05472885.1| translation initiation factor IF-3 [Anaerococcus vaginalis ATCC 51170] gi|256398736|gb|EEU12353.1| translation initiation factor IF-3 [Anaerococcus vaginalis ATCC 51170] Length = 184 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A + LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I Sbjct: 47 LDIAYDKQLDLVLMSPNAKPPVARIMDYGKFKYDQEKKAKENKKKQKTTQTKETRFSLNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL K FL +G KVK+S++F+GRE+ H++LG ++L E G+ +++D +P Sbjct: 107 EDHDLATKANQTKKFLNNGDKVKVSLRFKGRELGHKNLGYDVLDKFMEFVGDCAQVDKKP 166 Query: 121 KFEGRQMIMILSSKC 135 EGR +++ +S K Sbjct: 167 AMEGRSLVLFISPKT 181 >gi|237742396|ref|ZP_04572877.1| translation initiation factor IF-3 [Fusobacterium sp. 4_1_13] gi|256845724|ref|ZP_05551182.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_36A2] gi|294785030|ref|ZP_06750318.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_27] gi|229430044|gb|EEO40256.1| translation initiation factor IF-3 [Fusobacterium sp. 4_1_13] gi|256719283|gb|EEU32838.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_36A2] gi|294486744|gb|EFG34106.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_27] Length = 180 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F E + ++ Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAETAEVEK-- 163 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 164 KYADKQKHLILSPKKI 179 >gi|228477505|ref|ZP_04062141.1| translation initiation factor IF-3 [Streptococcus salivarius SK126] gi|312862919|ref|ZP_07723159.1| translation initiation factor IF-3 [Streptococcus vestibularis F0396] gi|322516716|ref|ZP_08069625.1| translation initiation factor IF3 [Streptococcus vestibularis ATCC 49124] gi|228250940|gb|EEK10128.1| translation initiation factor IF-3 [Streptococcus salivarius SK126] gi|311101779|gb|EFQ59982.1| translation initiation factor IF-3 [Streptococcus vestibularis F0396] gi|322124749|gb|EFX96187.1| translation initiation factor IF3 [Streptococcus vestibularis ATCC 49124] Length = 176 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|220930018|ref|YP_002506927.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] gi|220000346|gb|ACL76947.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10] Length = 176 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA NLDLV+I + P VCKI+D K + K EA+K QK IKEV++ I+ Sbjct: 42 KMAITKNLDLVKIVPNGAPPVCKIMDYGKYLFEQAKKEKEAKKNQKVVSIKEVRLSAKIE 101 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD VK+K FL+DG KVK+S++FRGRE+ + G+E+L E+ + +PK Sbjct: 102 EHDFDVKVKNAYKFLKDGDKVKVSIRFRGREMKYTSDGKEVLEKFANAVSEVGVAERQPK 161 Query: 122 FEGRQMIMILSS 133 EGR M++ILS Sbjct: 162 LEGRSMMIILSP 173 >gi|160945993|ref|ZP_02093219.1| hypothetical protein FAEPRAM212_03526 [Faecalibacterium prausnitzii M21/2] gi|158443724|gb|EDP20729.1| hypothetical protein FAEPRAM212_03526 [Faecalibacterium prausnitzii M21/2] Length = 192 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA LDLV+I P VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 56 MRAAEEAGLDLVKIAPQAVPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK+S++FRGRE+ H LG ++L E + + D P Sbjct: 116 DTNDFNTKLNQTAKFLAAGHKVKVSIRFRGREMAHSALGADVLKRFAEALPQ-ASADKPP 174 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 175 VLEGRTMSILLIPK 188 >gi|302327035|gb|ADL26236.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 194 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++A LDLVE+ + P VC+I++ K ++ K A A+ KQ +KE+KM P Sbjct: 38 LQMAKDAGLDLVEVSPNAKPPVCRIINYGKYKFEQLKKAKAAKAKQHVVKLKEIKMHPKT 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q ++K FL+DG KVK+ ++FRGRE+ H D G+ L+ KE ++ + Sbjct: 98 AENDYQYRIKQAGEFLQDGMKVKLIMQFRGREMAHMDYGKRLMERAKEDLAPFGDLEMDS 157 Query: 121 KFEGRQMIMILSSK 134 + EG M+ I K Sbjct: 158 RVEGNTMLSIYGPK 171 >gi|118586725|ref|ZP_01544162.1| translation initiation factor IF-3 [Oenococcus oeni ATCC BAA-1163] gi|118432813|gb|EAV39542.1| translation initiation factor IF-3 [Oenococcus oeni ATCC BAA-1163] Length = 204 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLV + + P V +I+D K+++ QK E +KKQ KEV++ PVI Sbjct: 47 RIADQRNLDLVIVQAKAQPPVARIMDWGKVKFEQQKKIRENKKKQVIVQTKEVRLSPVIG 106 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 107 EGDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQ 166 Query: 122 FEGRQMIMILSSK 134 GRQM ++LS K Sbjct: 167 LLGRQMSLLLSPK 179 >gi|11465469|ref|NP_045140.1| translation initiation factor 3 [Cyanidium caldarium] gi|14194842|sp|Q9TLX8|IF3C_CYACA RecName: Full=Translation initiation factor IF-3, chloroplastic gi|6466372|gb|AAF12954.1|AF022186_77 unknown [Cyanidium caldarium] Length = 185 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ +DLV ++ P VCK++D K ++ ++K E RKKQ +KEVKM I Sbjct: 47 VEYAKNQGVDLVLVNEISDPPVCKLIDYGKHKFIVEKRVKEGRKKQSGALVKEVKMTYKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + +L FL+ G KVK+++ F+GREI H LG LL+ + +I+ + P Sbjct: 107 NEHDYETRLNQAFKFLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSP 166 Query: 121 KFEGRQMIMILSSKCV 136 +G+ MI+IL+ K V Sbjct: 167 YQDGKTMILILTPKIV 182 >gi|302339088|ref|YP_003804294.1| translation initiation factor IF-3 [Spirochaeta smaragdinae DSM 11293] gi|301636273|gb|ADK81700.1| translation initiation factor IF-3 [Spirochaeta smaragdinae DSM 11293] Length = 176 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++AN DLVE+ + P VCKILD K ++ +K E++KKQK +KE++M+P I Sbjct: 36 LELARQANADLVEVSPNADPPVCKILDYGKYKFDQEKRRKESKKKQKQIKLKEIRMQPKI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR---ID 117 + HDL+ K K I FL +G KVK++++FRGRE+ H +LGR++L + E E+ +D Sbjct: 96 ETHDLEFKTKHIKTFLEEGNKVKVTIRFRGRELAHTELGRDVLMKVNEILEELETDFSMD 155 Query: 118 CEPKFEGRQMIMILSSKC 135 +P EGR M MILS K Sbjct: 156 RKPIMEGRFMSMILSPKT 173 >gi|237739650|ref|ZP_04570131.1| translation initiation factor IF-3 [Fusobacterium sp. 2_1_31] gi|229423258|gb|EEO38305.1| translation initiation factor IF-3 [Fusobacterium sp. 2_1_31] Length = 180 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI P VCKI+D K +Y + EA+K QK +KE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPGANPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVVKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL ++ FL KVKI++ GRE MH +LG L I E+F E + ++ Sbjct: 106 DSHDLETKLNQVNKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEVEK-- 163 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPKKA 179 >gi|262199907|ref|YP_003271116.1| translation initiation factor IF-3 [Haliangium ochraceum DSM 14365] gi|262083254|gb|ACY19223.1| translation initiation factor IF-3 [Haliangium ochraceum DSM 14365] Length = 177 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKM--RP 58 +++A+EA LDL+EI++ P VCKI+D K +Y K +++T KEV++ Sbjct: 8 LRLAEEAGLDLIEIEAKARPPVCKIMDYGKFKYERSKKKRTQSDAKRTTETKEVRLGRSV 67 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD++V+++ FL G +V+I +FRGRE+ H ++G E L + E E ++ Sbjct: 68 KIDDHDIRVRMEQARKFLLGGHRVRIIQRFRGREMAHTEIGFERLQELAEELSEFGKVVA 127 Query: 119 EPKFEGRQMIMILSS 133 P+ GRQ+ M L Sbjct: 128 PPRLMGRQLAMELVP 142 >gi|302874880|ref|YP_003843513.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] gi|307690503|ref|ZP_07632949.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] gi|302577737|gb|ADL51749.1| translation initiation factor IF-3 [Clostridium cellulovorans 743B] Length = 175 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV I + P V KI++L K Y K A+K QK IKE+++ I+ HD+++K Sbjct: 48 DLVLIAPTANPPVAKIMNLNKFIYEQSKKEKLAKKNQKVIEIKEIRLSATIEDHDIEIKA 107 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF-GEISRIDCEPKFEGRQMI 128 FL DG KVK++V+FRGRE + G ++L + E+ ++ + K EGR M Sbjct: 108 NRASKFLADGDKVKVTVRFRGREADYAFKGNDVLDIFVSKIDSEVYIVEKKAKLEGRNMT 167 Query: 129 MILSSKCV 136 M+L+ K Sbjct: 168 MVLAPKKA 175 >gi|294054379|ref|YP_003548037.1| translation initiation factor IF-3 [Coraliomargarita akajimensis DSM 45221] gi|293613712|gb|ADE53867.1| translation initiation factor IF-3 [Coraliomargarita akajimensis DSM 45221] Length = 209 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ LDL+EI P VC+ILD K Y K + KQ +T +KEVK R I Sbjct: 51 LALAQKVGLDLIEISPGARPPVCRILDFGKFLYEESKKQKDT--KQATTKLKEVKFRIGI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ +GFL +G KVK+S++FRGRE H +LG ++ ++ +S D E Sbjct: 109 DAHDFETKIRRAEGFLYNGNKVKLSLQFRGRENEHPELGIARINQARDELSGVSSPDGEA 168 Query: 121 KFEGRQMIMILSS 133 + GRQ+I+ILS Sbjct: 169 RHVGRQVILILSP 181 >gi|290580828|ref|YP_003485220.1| putative translation initiation factor IF3 [Streptococcus mutans NN2025] gi|254997727|dbj|BAH88328.1| putative translation initiation factor IF3 [Streptococcus mutans NN2025] Length = 200 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 N+DLV I TP V +I+D K ++ QK E RKKQ IKEV++ PVID D + Sbjct: 70 NVDLVLIQPQATPPVARIMDYGKFKFEYQKKQKEQRKKQSVVTIKEVRLSPVIDKGDFET 129 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K +GRQM Sbjct: 130 KLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQM 189 Query: 128 IMILSS 133 M L+ Sbjct: 190 FMQLAP 195 >gi|284037109|ref|YP_003387039.1| translation initiation factor IF-3 [Spirosoma linguale DSM 74] gi|283816402|gb|ADB38240.1| translation initiation factor IF-3 [Spirosoma linguale DSM 74] Length = 185 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 76/134 (56%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ NLDLVE+ + P VC+I+D K +Y +K E + IKE++ P D Sbjct: 48 MAKAQNLDLVEVSPNAVPPVCRIVDYSKFKYEQKKKQKEIKANATKVVIKEIRFGPNTDD 107 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD + KLK FL++G KVK V+F GR I+ +D G +LL + + +I+ EPK Sbjct: 108 HDFEFKLKHAINFLKEGAKVKAYVQFVGRAIVFKDRGFQLLERFSKGLEDYGKIEAEPKL 167 Query: 123 EGRQMIMILSSKCV 136 EG++M M LS K Sbjct: 168 EGKRMSMFLSPKVA 181 >gi|313674625|ref|YP_004052621.1| bacterial translation initiation factor 3 (bif-3) [Marivirga tractuosa DSM 4126] gi|312941323|gb|ADR20513.1| bacterial translation initiation factor 3 (bIF-3) [Marivirga tractuosa DSM 4126] Length = 182 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 77/134 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E NLDLVEI P VCKI+D K +Y +K E + K + T IKE++ P Sbjct: 46 LRMAEEQNLDLVEISPKADPPVCKIIDYSKFKYEQKKKQKEIKAKAQKTVIKEIRFGPNT 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KL FL+DG KVK V F GR I+ +D G LL ++ +++ P Sbjct: 106 DDHDFEFKLNHAKKFLKDGAKVKAYVHFVGRTIVFKDRGELLLLRFASELEDLGKVEQMP 165 Query: 121 KFEGRQMIMILSSK 134 K EG++M + ++ K Sbjct: 166 KLEGKRMTLFITPK 179 >gi|46580941|ref|YP_011749.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. Hildenborough] gi|120601758|ref|YP_966158.1| translation initiation factor IF-3 [Desulfovibrio vulgaris DP4] gi|61213119|sp|Q728R6|IF3_DESVH RecName: Full=Translation initiation factor IF-3 gi|166198957|sp|A1VBB5|IF3_DESVV RecName: Full=Translation initiation factor IF-3 gi|46450361|gb|AAS97009.1| translation initiation factor IF-3 [Desulfovibrio vulgaris str. Hildenborough] gi|120561987|gb|ABM27731.1| bacterial translation initiation factor 3 (bIF-3) [Desulfovibrio vulgaris DP4] gi|311234631|gb|ADP87485.1| translation initiation factor IF-3 [Desulfovibrio vulgaris RCH1] Length = 176 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E LDLVE+ ++ P VC+++D K +Y QK EA+K+Q IKE+K+RP Sbjct: 40 IALAKEKGLDLVEVAATADPPVCRVMDYGKYKYEQQKKKQEAKKRQTVVQIKEIKVRPKT 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD Q KLK + FL +G + K++V FRGREI+H+D G +L E +++++D E Sbjct: 100 DEHDYQTKLKHVRRFLEEGDRCKVTVFFRGREIVHKDRGLTILDRFVEDTKDLAKLDQEA 159 Query: 121 KFEGRQMIMILSS 133 + EGR + M+L+ Sbjct: 160 RAEGRTLQMMLAP 172 >gi|322372879|ref|ZP_08047415.1| translation initiation factor IF-3 [Streptococcus sp. C150] gi|321277921|gb|EFX54990.1| translation initiation factor IF-3 [Streptococcus sp. C150] Length = 176 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +IS I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDISIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|254481779|ref|ZP_05095022.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2148] gi|214037908|gb|EEB78572.1| translation initiation factor IF-3 [marine gamma proteobacterium HTCC2148] Length = 155 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +DLV I P+VCK++D K + +K +KKQK T IKE+K RP + D QV Sbjct: 27 GMDLVLIA-DSEPAVCKVMDYGKHIFEAKKQKSAQKKKQKRTQIKEMKFRPGTEEGDYQV 85 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL +G K K++++FRGRE+ HQ++G ELL ++ E+ ++ PK EGRQ+ Sbjct: 86 KLRNLTRFLENGDKAKVTLRFRGREMAHQEIGMELLKRVEADLAELGGVEQFPKMEGRQL 145 Query: 128 IMILSSKC 135 M+++ K Sbjct: 146 TMVIAPKK 153 >gi|164687660|ref|ZP_02211688.1| hypothetical protein CLOBAR_01302 [Clostridium bartlettii DSM 16795] gi|164603434|gb|EDQ96899.1| hypothetical protein CLOBAR_01302 [Clostridium bartlettii DSM 16795] Length = 144 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 80/134 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A NLDLV+I + P VCKI+D K +Y + EA+KKQK+ +KE+++RP I+ Sbjct: 9 LANGKNLDLVKISPNAKPPVCKIMDYGKYKYEQARKEKEAKKKQKTIAVKEIRLRPGIES 68 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +DL K FL+ G KVK+ ++FRGRE+ H+D+G+E++ E E P F Sbjct: 69 NDLNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFIEIVKEFGEPVKAPAF 128 Query: 123 EGRQMIMILSSKCV 136 EG M++I+ K Sbjct: 129 EGNNMVVIIDPKKT 142 >gi|55823056|ref|YP_141497.1| translation initiation factor IF-3 [Streptococcus thermophilus CNRZ1066] gi|81676558|sp|Q5LZL7|IF3_STRT1 RecName: Full=Translation initiation factor IF-3 gi|55739041|gb|AAV62682.1| translation initiation factor IF-3 [Streptococcus thermophilus CNRZ1066] Length = 176 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMNYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|313115006|ref|ZP_07800499.1| translation initiation factor IF-3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310622697|gb|EFQ06159.1| translation initiation factor IF-3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 192 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++A LDLV+I P VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 56 MRAAEDAGLDLVKIAPQAVPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 115 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK+S++FRGRE+ H LG ++L E + + D P Sbjct: 116 DTNDFNTKLNQTAKFLAAGHKVKVSIRFRGREMAHSALGADVLKRFAEALPQ-ASTDKPP 174 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 175 VLEGRTMSILLIPK 188 >gi|227485254|ref|ZP_03915570.1| translation initiation factor IF3 [Anaerococcus lactolyticus ATCC 51172] gi|227236714|gb|EEI86729.1| translation initiation factor IF3 [Anaerococcus lactolyticus ATCC 51172] Length = 185 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 75/132 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 MA + NLDLV + + P V +I+D K +Y +K E +KKQK+ +KE + I+ Sbjct: 48 DMADDRNLDLVLMSPNAKPPVTRIMDYGKFKYDQEKKEKENKKKQKNAQLKETRFSLNIE 107 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ +I+ +PK Sbjct: 108 DNDLQTKANQTKKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFNGMLDGCGKIEKKPK 167 Query: 122 FEGRQMIMILSS 133 EGR ++M L Sbjct: 168 MEGRSLVMFLEP 179 >gi|30468064|ref|NP_848951.1| translation initiation factor 3 [Cyanidioschyzon merolae strain 10D] gi|39931520|sp|Q85G77|IF3C_CYAME RecName: Full=Translation initiation factor IF-3, chloroplastic gi|30409164|dbj|BAC76113.1| initiation factor 3 [Cyanidioschyzon merolae strain 10D] Length = 175 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 2/134 (1%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A + LDL+ I+ + P VCKI++ K ++ ++K A RK Q +KE++M ++ Sbjct: 43 QLAAKKGLDLLLINPNADPPVCKIVNYGKYKFELEKKAKAKRKNQS--QLKEIQMSYNME 100 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD QV+L FL+ G KVK+++ +GRE+ H +L + ++ + ++++ P Sbjct: 101 EHDYQVRLSQACKFLKAGDKVKVTLMLKGREMQHLELAQNKMAQFQADVSSLAQLAKPPS 160 Query: 122 FEGRQMIMILSSKC 135 EGR + I K Sbjct: 161 QEGRNLSAIFVPKK 174 >gi|94994102|ref|YP_602200.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10750] gi|123382192|sp|Q1J7B8|IF3_STRPF RecName: Full=Translation initiation factor IF-3 gi|94547610|gb|ABF37656.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS10750] Length = 176 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|322379033|ref|ZP_08053436.1| translation initiation factor IF-3 [Helicobacter suis HS1] gi|322380799|ref|ZP_08054905.1| translation initiation factor IF-3 [Helicobacter suis HS5] gi|321146803|gb|EFX41597.1| translation initiation factor IF-3 [Helicobacter suis HS5] gi|321148525|gb|EFX43022.1| translation initiation factor IF-3 [Helicobacter suis HS1] Length = 171 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 70/133 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +DLV I + P VCK++D K Y +K EARKKQ+ IKE+K+ I Sbjct: 36 LRIAMSKGMDLVLISPTAKPPVCKVMDYGKFCYQSEKKQKEARKKQRQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ +G VK V RGRE G +L + E +I+ + EP Sbjct: 96 AQNDINYKVKHAREFIEEGKHVKFKVVLRGRESHDPKAGLAVLEKVAEMMKDIANAEKEP 155 Query: 121 KFEGRQMIMILSS 133 K EGR ++ + Sbjct: 156 KAEGRFVMWLFVP 168 >gi|304320891|ref|YP_003854534.1| translation initiation factor [Parvularcula bermudensis HTCC2503] gi|303299793|gb|ADM09392.1| translation initiation factor [Parvularcula bermudensis HTCC2503] Length = 174 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 65/134 (48%), Positives = 93/134 (69%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A EA LDLVE+ S VCK++D K +Y QK EA+KKQK IKE+KMRP I Sbjct: 41 LGLATEAKLDLVEVASGNDTPVCKLMDYGKFKYQQQKKKAEAKKKQKVVEIKEIKMRPNI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD +VK KA+ F +G KVK++++FRGRE+ HQ+ G ELL+ ++E F ++++ P Sbjct: 101 DKHDYEVKTKAMRRFFDEGDKVKVTLRFRGREMAHQERGMELLNRVREDFEGTTKVEAMP 160 Query: 121 KFEGRQMIMILSSK 134 K EGRQM+M+L+ + Sbjct: 161 KLEGRQMMMVLAPR 174 >gi|217967696|ref|YP_002353202.1| translation initiation factor IF-3 [Dictyoglomus turgidum DSM 6724] gi|217336795|gb|ACK42588.1| translation initiation factor IF-3 [Dictyoglomus turgidum DSM 6724] Length = 185 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-GIKEVKMRPV 59 +++A+E NLDLVE+ + P VCKI+D K +Y + + EA+K QK +KE+K+RP Sbjct: 35 LKLARERNLDLVEVAPNANPPVCKIMDFGKFKYELARKEKEAKKNQKIASEVKEIKIRPN 94 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I+ HD QVKL+ I FL G KV++ + F+GR++++ + G +LL I + ++ + + Sbjct: 95 IEEHDYQVKLRKIREFLEKGYKVRLIILFKGRQLIYNEWGDKLLERILQDISDLGTAEKK 154 Query: 120 PKFEGRQMIMILSS 133 + G ++ +L Sbjct: 155 GQQVGMSLVTMLIP 168 >gi|225619667|ref|YP_002720924.1| translation initiation factor IF-3 [Brachyspira hyodysenteriae WA1] gi|225214486|gb|ACN83220.1| translation initiation factor IF-3 [Brachyspira hyodysenteriae WA1] Length = 194 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ DLVEI + P VCKI++ K ++ IQK + EA+KKQKS +KE+KMRP I Sbjct: 39 LALAKSEGSDLVEIAPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKSVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLDEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEAATEKPA 158 Query: 121 KFEGRQMIMILSS 133 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLNP 171 >gi|28896228|ref|NP_802578.1| translation initiation factor IF-3 [Streptococcus pyogenes SSI-1] gi|28811479|dbj|BAC64411.1| putative translation initiation factor 3 (IF3) [Streptococcus pyogenes SSI-1] Length = 142 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 7 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 66 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 67 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 126 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 127 DGRQMFMQLAP 137 >gi|329895718|ref|ZP_08271122.1| Translation initiation factor 3 [gamma proteobacterium IMCC3088] gi|328922194|gb|EGG29549.1| Translation initiation factor 3 [gamma proteobacterium IMCC3088] Length = 184 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV+I P+VCKI+D K + +K RKKQK T +KE+K RP D+ D Q+KL Sbjct: 58 DLVQIA-DSDPAVCKIMDYGKHVFEAKKQKAAQRKKQKRTQVKEMKFRPGTDIGDYQIKL 116 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 KA+ FL +G K K++++FRGRE+ HQ++G ELL I+ E ++ PK EGRQ+ M Sbjct: 117 KALVRFLENGDKAKVTLRFRGREMAHQEIGIELLRRIEADLAEWGSVEQFPKMEGRQLTM 176 Query: 130 ILSSKC 135 +L+ K Sbjct: 177 VLAPKK 182 >gi|313673283|ref|YP_004051394.1| bacterial translation initiation factor 3 (bif-3) [Calditerrivibrio nitroreducens DSM 19672] gi|312940039|gb|ADR19231.1| bacterial translation initiation factor 3 (bIF-3) [Calditerrivibrio nitroreducens DSM 19672] Length = 175 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRP 58 +++AQE DLVEI + P VCK+LD K ++ K EARKKQ+ KE+K+RP Sbjct: 39 LKIAQERGYDLVEIAPNAKPPVCKLLDYGKFKFEKVKKEKEARKKQRQNMIETKELKLRP 98 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD VKLK I FL DG KVK+ V+F+GRE M + G +LL+ I ++ ++ Sbjct: 99 NIDEHDYDVKLKHIRRFLEDGDKVKLVVRFKGRETMFGEHGIDLLNRITADLQDLCVVEK 158 Query: 119 EPKFEGRQMIMILSSK 134 +P+ +GRQ +M+++ K Sbjct: 159 KPEMQGRQQVMVIAPK 174 >gi|294783293|ref|ZP_06748617.1| translation initiation factor IF-3 [Fusobacterium sp. 1_1_41FAA] gi|294480171|gb|EFG27948.1| translation initiation factor IF-3 [Fusobacterium sp. 1_1_41FAA] Length = 180 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI P VCK++D K +Y + EA+K QK +KE+K+ I Sbjct: 46 LNLASSQGYDLVEIAPGANPPVCKVMDYSKYKYEQTRKLKEAKKNQKQVVVKEIKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVKI++ GRE MH +LG L I E+F E + ++ Sbjct: 106 DSHDLETKLNQVTKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEVEK-- 163 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K Sbjct: 164 KYADKQKHLILSPKKA 179 >gi|55821145|ref|YP_139587.1| translation initiation factor IF-3 [Streptococcus thermophilus LMG 18311] gi|81676709|sp|Q5M470|IF3_STRT2 RecName: Full=Translation initiation factor IF-3 gi|55737130|gb|AAV60772.1| translation initiation factor IF-3 [Streptococcus thermophilus LMG 18311] Length = 176 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 82/131 (62%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI++ K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVIIQPQATPPVAKIMNYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E+ +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|319957837|ref|YP_004169100.1| bacterial translation initiation factor 3 (bif-3) [Nitratifractor salsuginis DSM 16511] gi|319420241|gb|ADV47351.1| bacterial translation initiation factor 3 (bIF-3) [Nitratifractor salsuginis DSM 16511] Length = 183 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E LDLV I TP V KI+D K +Y ++K EA+K QK +KEVK I Sbjct: 47 LKIAEEKGLDLVLISPDATPPVAKIMDYGKHKYQVEKKKKEAKKNQKKIEVKEVKFSCKI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK+ V RGRE+ + +LG E+L + +I ++ P Sbjct: 107 ADNDIAYKVKHAREFLEKGKHVKLRVFLRGREMANPELGVEVLKRVWPMIEDIGVMEKAP 166 Query: 121 KFEGRQMIMILSSKC 135 EGR + M ++ K Sbjct: 167 HQEGRYITMYVTPKK 181 >gi|195977985|ref|YP_002123229.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868683|ref|YP_002744631.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus] gi|225870360|ref|YP_002746307.1| translation initiation factor IF-3 [Streptococcus equi subsp. equi 4047] gi|238689812|sp|B4U2J9|IF3_STREM RecName: Full=Translation initiation factor IF-3 gi|254803493|sp|C0M8S9|IF3_STRE4 RecName: Full=Translation initiation factor IF-3 gi|259491514|sp|C0MGM0|IF3_STRS7 RecName: Full=Translation initiation factor IF-3 gi|195974690|gb|ACG62216.1| translation initiation factor InfC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699764|emb|CAW93544.1| translation initiation factor IF-3 [Streptococcus equi subsp. equi 4047] gi|225701959|emb|CAW99501.1| translation initiation factor IF-3 [Streptococcus equi subsp. zooepidemicus] Length = 176 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADAANVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|239940057|ref|ZP_04691994.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 15998] gi|239986546|ref|ZP_04707210.1| translation initiation factor IF-3 [Streptomyces roseosporus NRRL 11379] Length = 164 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 48/111 (43%), Positives = 64/111 (57%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 CK++D K +Y A EARK Q T IKE+K+RP ID HD K + FL+ G KV Sbjct: 2 CKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKV 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 KI++ FRGRE +LG LL + ++ I+ PK +GR MIM+L Sbjct: 62 KITIMFRGREQSRPELGFRLLQRLASDVEDLGFIESNPKQDGRNMIMVLGP 112 >gi|332522796|ref|ZP_08399048.1| translation initiation factor IF-3 [Streptococcus porcinus str. Jelinkova 176] gi|332314060|gb|EGJ27045.1| translation initiation factor IF-3 [Streptococcus porcinus str. Jelinkova 176] Length = 176 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADNANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|85711635|ref|ZP_01042692.1| Translation initiation factor 3 [Idiomarina baltica OS145] gi|85694495|gb|EAQ32436.1| Translation initiation factor 3 [Idiomarina baltica OS145] Length = 124 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 + + P VC+++D K Y K+ E +KKQK +KEVK RP D D QVKL+ + Sbjct: 1 MSPNAEPPVCRLMDYGKFLYEKSKDQKEQKKKQKQIQVKEVKFRPGTDEGDYQVKLRNLR 60 Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF-EGRQMIMILS 132 FL G K K++++FRGRE+ HQ+LG ELL+ IK+ EIS ++ P+ EGRQMIM+L+ Sbjct: 61 RFLEGGDKTKVTIRFRGREMAHQELGIELLTRIKDDLDEISTVESFPRRAEGRQMIMVLA 120 Query: 133 S 133 Sbjct: 121 P 121 >gi|313890567|ref|ZP_07824195.1| translation initiation factor IF-3 [Streptococcus pseudoporcinus SPIN 20026] gi|313121084|gb|EFR44195.1| translation initiation factor IF-3 [Streptococcus pseudoporcinus SPIN 20026] Length = 176 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADNANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|257440572|ref|ZP_05616327.1| translation initiation factor IF-3 [Faecalibacterium prausnitzii A2-165] gi|257196895|gb|EEU95179.1| translation initiation factor IF-3 [Faecalibacterium prausnitzii A2-165] Length = 183 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A+EA LDLV+I TP VCK+LD K R+ QK EA+K QK +KE ++ I Sbjct: 47 MRAAEEAGLDLVKIAPQATPPVCKVLDYGKYRFEQQKKEKEAKKNQKVVEVKETRLSLNI 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL FL G KVK S++FRGRE+ H LG ++L E + + +D P Sbjct: 107 DTNDFNTKLNQTAKFLAAGHKVKASIRFRGREMAHSALGADVLKRFAEALPQ-ASMDKPP 165 Query: 121 KFEGRQMIMILSSK 134 EGR M ++L K Sbjct: 166 VLEGRTMSILLIPK 179 >gi|15674846|ref|NP_269020.1| translation initiation factor IF-3 [Streptococcus pyogenes M1 GAS] gi|19745885|ref|NP_607021.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS8232] gi|21910074|ref|NP_664342.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS315] gi|50913982|ref|YP_059954.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10394] gi|56808731|ref|ZP_00366450.1| COG0290: Translation initiation factor 3 (IF-3) [Streptococcus pyogenes M49 591] gi|71903264|ref|YP_280067.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS6180] gi|71910432|ref|YP_281982.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS5005] gi|94988305|ref|YP_596406.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS9429] gi|94990183|ref|YP_598283.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS10270] gi|94992181|ref|YP_600280.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS2096] gi|139474014|ref|YP_001128730.1| translation initiation factor IF-3 [Streptococcus pyogenes str. Manfredo] gi|209559173|ref|YP_002285645.1| translation initiation factor IF-3 [Streptococcus pyogenes NZ131] gi|306827594|ref|ZP_07460874.1| translation initiation factor IF3 [Streptococcus pyogenes ATCC 10782] gi|54037394|sp|P65147|IF3_STRP3 RecName: Full=Translation initiation factor IF-3 gi|54037395|sp|P65148|IF3_STRP8 RecName: Full=Translation initiation factor IF-3 gi|54041116|sp|P65146|IF3_STRP1 RecName: Full=Translation initiation factor IF-3 gi|61213081|sp|Q5XCU2|IF3_STRP6 RecName: Full=Translation initiation factor IF-3 gi|122986937|sp|Q1JCH2|IF3_STRPB RecName: Full=Translation initiation factor IF-3 gi|122987125|sp|Q1JMF0|IF3_STRPC RecName: Full=Translation initiation factor IF-3 gi|123258030|sp|Q1JHJ7|IF3_STRPD RecName: Full=Translation initiation factor IF-3 gi|123775251|sp|Q48U94|IF3_STRPM RecName: Full=Translation initiation factor IF-3 gi|166233784|sp|A2RF84|IF3_STRPG RecName: Full=Translation initiation factor IF-3 gi|238054434|sp|B5XKT8|IF3_STRPZ RecName: Full=Translation initiation factor IF-3 gi|13621980|gb|AAK33741.1| putative translation initiation factor 3 (IF3) [Streptococcus pyogenes M1 GAS] gi|19748037|gb|AAL97520.1| translation initiation factor IF-3 [Streptococcus pyogenes MGAS8232] gi|21904265|gb|AAM79145.1| putative translation initiation factor 3 [Streptococcus pyogenes MGAS315] gi|50903056|gb|AAT86771.1| Translation Initiation Factor 3 [Streptococcus pyogenes MGAS10394] gi|71802359|gb|AAX71712.1| bacterial protein translation initiation factor 3 (IF-3) [Streptococcus pyogenes MGAS6180] gi|71853214|gb|AAZ51237.1| bacterial protein translation initiation factor 3 [Streptococcus pyogenes MGAS5005] gi|94541813|gb|ABF31862.1| bacterial protein translation initiation factor 3 (IF-3) [Streptococcus pyogenes MGAS9429] gi|94543691|gb|ABF33739.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS10270] gi|94545689|gb|ABF35736.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Streptococcus pyogenes MGAS2096] gi|134272261|emb|CAM30513.1| translation initiation factor IF-3 [Streptococcus pyogenes str. Manfredo] gi|209540374|gb|ACI60950.1| Translation initiation factor 3 [Streptococcus pyogenes NZ131] gi|304430157|gb|EFM33186.1| translation initiation factor IF3 [Streptococcus pyogenes ATCC 10782] Length = 176 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|296108362|ref|YP_003620063.1| Translation initiation factor 3 (IF-3) [Legionella pneumophila 2300/99 Alcoy] gi|295650264|gb|ADG26111.1| Translation initiation factor 3 (IF-3) [Legionella pneumophila 2300/99 Alcoy] Length = 126 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 80/125 (64%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +EI + P VC+I+D K + + K EA+KKQK +KE+K RP + D QVKL+ Sbjct: 1 MEISPTAKPPVCRIMDYGKFLFELSKKQAEAKKKQKQIQVKELKFRPTTEDGDYQVKLRN 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVKI+++FRGRE+ HQ+LG ++L ++ +++ ++ K EGRQ++M+L Sbjct: 61 LIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAIVEQHAKREGRQLLMVL 120 Query: 132 SSKCV 136 S K Sbjct: 121 SPKKT 125 >gi|325847688|ref|ZP_08170011.1| translation initiation factor IF-3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480900|gb|EGC83952.1| translation initiation factor IF-3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 179 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A + +LDLV + + P V +I+D K +Y +K A E +KKQK+T KE + I Sbjct: 42 LDRAYDKHLDLVLMSPNAKPPVARIMDYGKFKYEQEKKAKENKKKQKTTQTKETRFSLNI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HDL+ K FL +G KVK+SV+F+GRE+ H++LG +LL E G+ +++D +P Sbjct: 102 EDHDLETKANQTKKFLNNGDKVKVSVRFKGRELGHKNLGYDLLDKFMEFVGDCAQVDKKP 161 Query: 121 KFEGRQMIMILSSKC 135 EGR +++ +S Sbjct: 162 AMEGRSLVLFISPNT 176 >gi|329117528|ref|ZP_08246245.1| translation initiation factor IF-3 [Streptococcus parauberis NCFD 2020] gi|326907933|gb|EGE54847.1| translation initiation factor IF-3 [Streptococcus parauberis NCFD 2020] Length = 176 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 78/131 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A N+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADSLNVDLVLIQPQAVPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +IS I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDISIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|323127037|gb|ADX24334.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 176 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADTSNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|310658433|ref|YP_003936154.1| protein chain initiation factor if-3 [Clostridium sticklandii DSM 519] gi|308825211|emb|CBH21249.1| protein chain initiation factor IF-3 [Clostridium sticklandii] Length = 171 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 58/134 (43%), Positives = 84/134 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A + NLDLV+I + P VCKI+D K +Y + K E++KKQK IKEV++RP I+ Sbjct: 37 NLATQKNLDLVKISPNANPPVCKIMDFGKFKYEMAKKEKESKKKQKVVVIKEVRLRPSIE 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HDL K K FL G KVK+SV+FRGRE+ H+++G E+++ + E+ D P+ Sbjct: 97 EHDLSTKAKMAYKFLESGDKVKVSVRFRGRELGHKEIGVEVINKFIDLVKEVGTPDRAPR 156 Query: 122 FEGRQMIMILSSKC 135 EG MI++L K Sbjct: 157 LEGNTMIVMLDPKK 170 >gi|222152873|ref|YP_002562050.1| translation initiation factor IF-3 [Streptococcus uberis 0140J] gi|254803496|sp|B9DU40|IF3_STRU0 RecName: Full=Translation initiation factor IF-3 gi|222113686|emb|CAR41622.1| translation initiation factor IF-3 [Streptococcus uberis 0140J] Length = 176 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 79/131 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADAANVDLVLIQPQAVPPVAKIMDYGKFKFEFQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|116491274|ref|YP_810818.1| translation initiation factor 3 [Oenococcus oeni PSU-1] gi|116091999|gb|ABJ57153.1| bacterial translation initiation factor 3 (bIF-3) [Oenococcus oeni PSU-1] Length = 214 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDL+ + + P V +I+D K+++ QK E +KKQ KEV++ PVI Sbjct: 57 RIADQRNLDLIIVQAKAQPPVARIMDWGKVKFEQQKKIRENKKKQIIVQTKEVRLSPVIG 116 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 117 EGDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQ 176 Query: 122 FEGRQMIMILSSK 134 GRQM ++LS K Sbjct: 177 LLGRQMSLLLSPK 189 >gi|254446379|ref|ZP_05059855.1| translation initiation factor IF-3, C-terminal domain, putative [Verrucomicrobiae bacterium DG1235] gi|198260687|gb|EDY84995.1| translation initiation factor IF-3, C-terminal domain, putative [Verrucomicrobiae bacterium DG1235] Length = 200 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLVE+ + P VC+I+D K Y QK + ++ K S+ KEVK RP + Sbjct: 18 LEIALSGGLDLVEVAAQARPPVCRIMDFGKYVYEQQKKSKDS--KATSSKTKEVKFRPRV 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD + KL+ + FL G K+K+++ FRGRE+ H ++G E + + D +P Sbjct: 76 EQHDYETKLRRAELFLSKGNKLKLTLSFRGREMSHTEIGFETIRRAIVDLETMGHADNQP 135 Query: 121 KFEGRQMIMILSS 133 + GR + +++S Sbjct: 136 RLVGRNINVMVSP 148 >gi|251782183|ref|YP_002996485.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390812|dbj|BAH81271.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322411519|gb|EFY02427.1| translation initiation factor IF-3 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 176 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 80/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +N+DLV I P V K++D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 LADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKM 160 Query: 123 EGRQMIMILSS 133 +GRQM M L+ Sbjct: 161 DGRQMFMQLAP 171 >gi|261415203|ref|YP_003248886.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371659|gb|ACX74404.1| translation initiation factor IF-3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 203 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++A LDLVE+ + P VC+I++ K ++ K A A+ KQ +KE+KM P Sbjct: 47 LQMAKDAGLDLVEVSPNAKPPVCRIINYGKYKFEQLKKAKAAKAKQHVVKLKEIKMHPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q ++K FL+DG KVK+ ++FRGRE+ H D G+ L+ KE ++ + Sbjct: 107 AENDYQYRIKQAGEFLQDGMKVKLIMQFRGREMAHMDYGKRLMERAKEDLAPFDDLEMDS 166 Query: 121 KFEGRQMIMILSSK 134 + EG M+ I K Sbjct: 167 RVEGNTMLSIYGPK 180 >gi|310821381|ref|YP_003953739.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] gi|309394453|gb|ADO71912.1| Translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1] Length = 194 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 49/116 (42%), Positives = 76/116 (65%) Query: 18 VTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLR 77 P VCKI+D K +Y +K A EA+KKQ +KEVK+RP + HD + K++ + FL Sbjct: 2 AKPPVCKIMDYGKFKYEEKKKASEAKKKQVVVHLKEVKLRPKTEEHDYEFKVRNVKRFLE 61 Query: 78 DGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 +G K K+++ FRGREI H++LG +L ++ + E++ ++ P+ EGRQM MIL+ Sbjct: 62 EGNKAKVTIVFRGREITHKELGSAILDDVNKDLKEVAVVEQAPRMEGRQMFMILAP 117 >gi|290890821|ref|ZP_06553888.1| hypothetical protein AWRIB429_1278 [Oenococcus oeni AWRIB429] gi|290479593|gb|EFD88250.1| hypothetical protein AWRIB429_1278 [Oenococcus oeni AWRIB429] Length = 175 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 85/133 (63%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A + NLDLV + + P V +I+D K+R+ QK E +KKQ KEV++ PVI Sbjct: 18 RIADQRNLDLVIVQAKAQPPVARIMDWGKVRFEQQKKIRENKKKQVIVQTKEVRLSPVIG 77 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + + KA FL G KVK++++FRGR + HQD+GR++L N+ ++ +++ ID P+ Sbjct: 78 EGDFETRKKAATKFLVAGNKVKLNLRFRGRMMTHQDVGRQVLMNMAKQLADLANIDQMPQ 137 Query: 122 FEGRQMIMILSSK 134 GRQM ++LS K Sbjct: 138 LLGRQMSLLLSPK 150 >gi|87122883|ref|ZP_01078751.1| translation initiation factor [Marinomonas sp. MED121] gi|86161834|gb|EAQ63131.1| translation initiation factor [Marinomonas sp. MED121] Length = 177 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLV+I P VCK++D K + +K +K K +KE+K RP + D QV Sbjct: 49 KLDLVQIA-DSDPVVCKVMDYGKHIFEQKKAKAAQKKNAKQIQVKEIKFRPGTEEGDYQV 107 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ + FL G K K+S+++RGRE+ HQ+LG +L+ + E GE ++ K EGRQ+ Sbjct: 108 KLRNLIRFLEGGDKAKVSLRYRGREMAHQELGMQLMHRVAEDLGEYGVVEQAAKMEGRQL 167 Query: 128 IMILSSKC 135 M+L+ K Sbjct: 168 TMVLAPKK 175 >gi|83647271|ref|YP_435706.1| translation initiation factor 3 [Hahella chejuensis KCTC 2396] gi|83635314|gb|ABC31281.1| Translation initiation factor 3 (IF-3) [Hahella chejuensis KCTC 2396] Length = 136 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+ A++ LDLV+I P VC+I+D K + +K A+KKQK T +KE+K RP Sbjct: 1 MEKAEQEGLDLVQIA-DSDPVVCRIMDYGKKIFEEKKQKAAAKKKQKQTQVKEMKFRPGT 59 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL G K K+S++FRGRE+ HQ+LG +LL +++ E ++ P Sbjct: 60 EEGDYQVKLRNLIRFLEHGDKAKVSIRFRGREMAHQELGLQLLQRVEKDLEEFGVVEQRP 119 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ +M+++ K Sbjct: 120 KMEGRQAMMVVAPKK 134 >gi|310779334|ref|YP_003967667.1| bacterial translation initiation factor 3 (bIF-3) [Ilyobacter polytropus DSM 2926] gi|309748657|gb|ADO83319.1| bacterial translation initiation factor 3 (bIF-3) [Ilyobacter polytropus DSM 2926] Length = 170 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA E +LDLVE+ S+ TP VCKI+D K +Y + A EA+K QK +KEVK + I Sbjct: 38 LSMAMERDLDLVEVSSNSTPPVCKIMDYGKFKYEQARKAKEAKKNQKLVVVKEVKFKARI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K I+ FL KVK+++ GRE MH DLG ++L I ERF E + +D Sbjct: 98 DKHDFETKASKIEKFLSKDNKVKVTLMLFGRERMHADLGIKILDQIAERFSETADVDK-- 155 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q ++L+ K Sbjct: 156 KYFDKQKHLMLTPKK 170 >gi|296283260|ref|ZP_06861258.1| translation initiation factor IF-3 [Citromicrobium bathyomarinum JL354] Length = 113 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 56/112 (50%), Positives = 80/112 (71%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 CK LD+ K RY QK A ARK QK+ IKEVKMRP ID HD VK++ + F+ +G KV Sbjct: 2 CKFLDVGKHRYEAQKKANLARKTQKTQDIKEVKMRPNIDTHDYDVKMRNVVKFIENGDKV 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 K +++FRGRE+ HQ LG +LL+ +++ EI++++ P+ EGRQM+M+L+ K Sbjct: 62 KCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPRLEGRQMLMVLAPK 113 >gi|300870145|ref|YP_003785016.1| translation initiation factor IF-3 [Brachyspira pilosicoli 95/1000] gi|300687844|gb|ADK30515.1| translation initiation factor IF-3 [Brachyspira pilosicoli 95/1000] Length = 196 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 84/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P VCKI++ K ++ IQK + EA+KKQKS +KE+KMRP I Sbjct: 39 LALAKEEGSDLVEIVPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKSVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLDEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEASTEKPA 158 Query: 121 KFEGRQMIMILSS 133 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLNP 171 >gi|331006135|ref|ZP_08329464.1| Translation initiation factor 3 [gamma proteobacterium IMCC1989] gi|330420059|gb|EGG94396.1| Translation initiation factor 3 [gamma proteobacterium IMCC1989] Length = 135 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 88/133 (66%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MAQ A LDLVEI TP VCK++D K + ++K A+KKQK +KE+K RP D Sbjct: 1 MAQAATLDLVEIVPDSTPIVCKVMDYGKHLFGLKKTKAAAKKKQKQQQVKEMKFRPGTDE 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D +VKL+ + FL +G K K+S+++RGRE+ HQ+LG E+L I+ E++ ++ PK Sbjct: 61 GDYKVKLRNLIRFLENGDKAKVSLRYRGREMAHQELGMEMLKRIETDLVELATVEQFPKM 120 Query: 123 EGRQMIMILSSKC 135 EGRQ+IM+++ K Sbjct: 121 EGRQLIMVMAPKK 133 >gi|229027592|ref|ZP_04183810.1| Translation initiation factor IF-3 [Bacillus cereus AH1272] gi|228733711|gb|EEL84487.1| Translation initiation factor IF-3 [Bacillus cereus AH1272] Length = 112 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/109 (42%), Positives = 66/109 (60%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K R+ QK E RK QK +KEV++ P ID HD KL+ FL G KVK S Sbjct: 1 MDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKAS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++F+GR I H+++G+ +L E E+S I+ +PK EGR M ++L+ K Sbjct: 61 IRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAPK 109 >gi|311693963|gb|ADP96836.1| translation initiation factor 3 [marine bacterium HP15] Length = 142 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 89/135 (65%), Gaps = 1/135 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EA LDLV++ P VCKI+D K + +K A+KKQK T +KE+K RP Sbjct: 7 LKQAEEATLDLVQVT-DSDPIVCKIMDYGKKIFEEKKAKAAAKKKQKQTQVKELKFRPGT 65 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D QVKL+ + FL +G + KI+++FRGRE+ HQ++G +L+ I+ E+++++ P Sbjct: 66 EEGDYQVKLRNLIRFLENGDRGKITIRFRGREMAHQEIGMQLMQRIETDIEELAQVEMRP 125 Query: 121 KFEGRQMIMILSSKC 135 K EGRQM M+++ + Sbjct: 126 KMEGRQMTMVVAPRK 140 >gi|189219986|ref|YP_001940626.1| translation initiation factor IF-3 [Methylacidiphilum infernorum V4] gi|226707357|sp|B3DYI1|IF3_METI4 RecName: Full=Translation initiation factor IF-3 gi|189186844|gb|ACD84029.1| Translation initiation factor IF-3 [Methylacidiphilum infernorum V4] Length = 217 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 2/126 (1%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVE+ P VCKILD K +Y++ K +++K T +KE+++ I+ HD + Sbjct: 52 GLDLVEVSPHAHPPVCKILDYGKFKYSLSKKEKDSKKGA--TKLKEIQLHVNINEHDFLI 109 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KLK + F+ G KVK ++ RGREI HQDL L++ + + + + D EPK GR + Sbjct: 110 KLKQAEAFMAKGMKVKFNLFLRGREITHQDLALNLMNRLIKELAHVGQTDQEPKLAGRNI 169 Query: 128 IMILSS 133 + + Sbjct: 170 SLTFTP 175 >gi|145344485|ref|XP_001416762.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576988|gb|ABO95055.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 177 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRP 58 +++A E LDLV + P + +I++ K +Y +K EARKK IKE+KMR Sbjct: 35 LELAAEKELDLVVMSPDAEPPLARIMNYSKYKYEKEKKDREARKKAAAVRVDIKELKMRY 94 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL G KVK+ +FRGRE +++GRE+ + E GE+ ++ Sbjct: 95 NIDTHDYGVRLRAAQKFLEGGDKVKVICQFRGRENDFREIGREMFARFVEDVGEVGSLES 154 Query: 119 EPKFEGRQMIMILSS 133 +P EG M M+L+ Sbjct: 155 KPSMEGNSMTMLLAP 169 >gi|296127838|ref|YP_003635090.1| translation initiation factor IF-3 [Brachyspira murdochii DSM 12563] gi|296019654|gb|ADG72891.1| translation initiation factor IF-3 [Brachyspira murdochii DSM 12563] Length = 192 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+E DLVEI + P VCKI++ K ++ IQK + EA+KKQK +KE+KMRP I Sbjct: 39 LALAKEEGSDLVEIVPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKLVQLKEIKMRPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HD K+K I FL +G KVKI++ FRGRE+ H + G +L++ I + + + Sbjct: 99 SIHDYNFKMKHIREFLEEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEAATEKPA 158 Query: 121 KFEGRQMIMILSS 133 K EG+ + +L+ Sbjct: 159 KLEGKNLSAVLNP 171 >gi|120554977|ref|YP_959328.1| initiation factor 3 [Marinobacter aquaeolei VT8] gi|120324826|gb|ABM19141.1| bacterial translation initiation factor 3 (bIF-3) [Marinobacter aquaeolei VT8] Length = 134 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 1/133 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLV++ P VCKI+D K + +K A+KKQK T +KE+K RP + Sbjct: 1 MAEEATLDLVQVT-DSDPIVCKIMDYGKKIFEEKKAKAAAKKKQKQTQVKELKFRPGTEE 59 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL +G + KI+++FRGRE+ HQ++G +L+ I+E EI++++ PK Sbjct: 60 GDYQVKLRNLVRFLENGDRGKITIRFRGREMAHQEIGMKLMQRIEEDVAEIAQVEMRPKM 119 Query: 123 EGRQMIMILSSKC 135 EGRQM M+++ + Sbjct: 120 EGRQMTMVIAPRK 132 >gi|11932198|emb|CAC19093.1| IF-3 [Listeria innocua] gi|11932206|emb|CAC19097.1| IF-3 [Listeria ivanovii] gi|11932929|emb|CAC19103.1| IF-3 [Listeria welshimeri] Length = 139 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 68/105 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ANLDLV + + P V +I+D K R+ QK EARK QK +KEV++ P I Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTI 94 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSN 105 D HD KL+ FL G KVK S++F+GR I H+++G+++L Sbjct: 95 DEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDR 139 >gi|256028150|ref|ZP_05441984.1| protein translation initiation factor 3 [Fusobacterium sp. D11] gi|289766086|ref|ZP_06525464.1| translation initiation factor IF-3 [Fusobacterium sp. D11] gi|289717641|gb|EFD81653.1| translation initiation factor IF-3 [Fusobacterium sp. D11] Length = 141 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ I Sbjct: 7 LNLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL + FL KVK+++ GRE MH +LG L I E+F EI+ ++ Sbjct: 67 DSHDLETKLNQVTKFLEKENKVKVTLVLFGREKMHANLGVTTLDEIAEKFAEIAEVEK-- 124 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K + Sbjct: 125 KYADKQKHLILSPKKI 140 >gi|227501358|ref|ZP_03931407.1| translation initiation factor IF3 [Anaerococcus tetradius ATCC 35098] gi|227216457|gb|EEI81867.1| translation initiation factor IF3 [Anaerococcus tetradius ATCC 35098] Length = 145 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA + LDLV + + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 7 LDMAYDKKLDLVLMSPNAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNIQLKETRFSLNI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K+ G+ ++ P Sbjct: 67 EDNDLQTKANQSKKFLNNGDKVKVSIRFRGRELGRKEPGYELMEKFKQMLGDSCKLTKSP 126 Query: 121 KFEGRQMIMILSS 133 K EGR ++M L Sbjct: 127 KMEGRSLVMFLEP 139 >gi|167751463|ref|ZP_02423590.1| hypothetical protein EUBSIR_02459 [Eubacterium siraeum DSM 15702] gi|167655271|gb|EDR99400.1| hypothetical protein EUBSIR_02459 [Eubacterium siraeum DSM 15702] Length = 198 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA EA+LDLV I S TP VC+I+D K R+ K E++K QK +KE++M I Sbjct: 45 LDMAIEADLDLVLIAPSATPPVCRIMDYGKFRFEQSKKEKESKKNQKQAELKEIQMSLNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRG-REIMHQDLGRELLSNIKERFGEISRIDCE 119 D +D K FL++G KV+I V++R RE+ H +LG EL+ + E E + Sbjct: 105 DTNDFNTKANQAIKFLKNGDKVRIKVRYRRARELSHANLGEELMQRVLEAVSEYGACEKP 164 Query: 120 PKFEGRQMIMILSS 133 K EG+ + +++ Sbjct: 165 AKLEGKNYMAVVAP 178 >gi|218960856|ref|YP_001740631.1| protein chain initiation factor IF-3 [Candidatus Cloacamonas acidaminovorans] gi|167729513|emb|CAO80424.1| protein chain initiation factor IF-3 [Candidatus Cloacamonas acidaminovorans] Length = 195 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ +LDLVEI + P VC+ILD K + +K A EARK+Q +KE+K P Sbjct: 34 LRKAENMDLDLVEISPNAVPPVCRILDFSKYYFEKEKKAKEARKRQHEVEVKEIKFGPNT 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K FL+ KVK +V+FRGR++ H++LG ++L +KE + ID EP Sbjct: 94 EEHDYNFKKNNAIKFLKQHNKVKFTVRFRGRQMAHKELGYKVLDKLKEDLAHLVDIDGEP 153 Query: 121 KFEGRQMIMILSSKC 135 + + M++S K Sbjct: 154 VADRNMISMVVSPKK 168 >gi|262341224|ref|YP_003284079.1| translation initiation factor IF-3 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272561|gb|ACY40469.1| translation initiation factor IF-3 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 174 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 80/135 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+E LDLVEI+ + P VCKILD +K Y +K + + KQ KE++ P I Sbjct: 39 LQFARERELDLVEINPKLDPPVCKILDYKKFLYEQKKRKKQFKAKQIKVNTKEIRFGPQI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD +VK+K+ + FL G KVK+ V F+GR I+++D G+ L E E +++ P Sbjct: 99 GDHDGKVKIKSAEKFLMRGDKVKVFVFFKGRSIVYKDQGKIKLLKFAEEIEEYGKVEQMP 158 Query: 121 KFEGRQMIMILSSKC 135 EG++M MIL+ K Sbjct: 159 VMEGKRMYMILAPKK 173 >gi|332885363|gb|EGK05612.1| hypothetical protein HMPREF9456_02414 [Dysgonomonas mossii DSM 22836] Length = 207 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 73/132 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLVEI + P VCKI D +K Y +K EA+ K +KE++ P Sbjct: 43 LRLADALELDLVEISPTAEPPVCKITDYQKFLYQQKKKQKEAKAKSVKVVVKEIRFGPQT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK GFL +G K+K V F+GR I+ ++ G LL + ++D P Sbjct: 103 DDHDFNFKLKHAKGFLEEGSKLKAYVFFKGRSILFKEQGEVLLLRFATELEDYGKVDQLP 162 Query: 121 KFEGRQMIMILS 132 EG++MIM++S Sbjct: 163 ALEGKRMIMMMS 174 >gi|293401373|ref|ZP_06645516.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305011|gb|EFE46257.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 193 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + P VCK+LD K + QK A EA+KKQ T +K +++ PVI Sbjct: 58 LEIAYNQELDLLCVAPKAQPPVCKVLDYGKYHFEQQKKAKEAKKKQHVTEVKPIRLSPVI 117 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ I+ +P Sbjct: 118 DRHDFETKMRHARKWIEDGMKVKVDMRFRGRLITRLEVGKKIMNSFTEEISDIAVIEKKP 177 Query: 121 KFEGRQMIMILSSKC 135 EG M +L+ K Sbjct: 178 ILEGNTMSCVLAPKK 192 >gi|24379168|ref|NP_721123.1| translation initiation factor IF-3 [Streptococcus mutans UA159] gi|29427453|sp|Q8DV22|IF3_STRMU RecName: Full=Translation initiation factor IF-3 gi|24377076|gb|AAN58429.1|AE014913_6 putative translation initiation factor IF3 [Streptococcus mutans UA159] Length = 176 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 78/126 (61%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 N+DLV I TP V +I+D K ++ QK E RKKQ IKEV++ PVID D + Sbjct: 46 NVDLVLIQPQATPPVARIMDYGKFKFEYQKKQKEQRKKQSVVTIKEVRLSPVIDKGDFET 105 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 KL+ FL G KVK+S++F+GR I H+++G ++L++ E +I+ I+ K +GRQM Sbjct: 106 KLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQM 165 Query: 128 IMILSS 133 M L+ Sbjct: 166 FMQLAP 171 >gi|58699833|ref|ZP_00374452.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533651|gb|EAL58031.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 143 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 55/128 (42%), Positives = 82/128 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 130 Query: 121 KFEGRQMI 128 K EG Q Sbjct: 131 KREGNQYF 138 >gi|119476521|ref|ZP_01616872.1| Translation initiation factor 3 (IF-3) [marine gamma proteobacterium HTCC2143] gi|119450385|gb|EAW31620.1| Translation initiation factor 3 (IF-3) [marine gamma proteobacterium HTCC2143] Length = 143 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 1/127 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLV+I P VCKI+D K + +K +KKQ T +KE+K RP + D QVK Sbjct: 15 LDLVQIA-DSDPIVCKIMDYGKHVFEAKKQQAAQKKKQVRTQVKEMKFRPGTEDGDYQVK 73 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L+ + FL +G K K+++++RGRE+ HQ+LG +LL +++ E+ ++ PK EGRQ+ Sbjct: 74 LRNLVRFLENGDKAKVTLRYRGREMAHQELGIDLLKRVEKDLEELGSVEQFPKMEGRQLT 133 Query: 129 MILSSKC 135 M+++ K Sbjct: 134 MVIAPKS 140 >gi|320353537|ref|YP_004194876.1| translation initiation factor 3 (bIF-3) [Desulfobulbus propionicus DSM 2032] gi|320122039|gb|ADW17585.1| bacterial translation initiation factor 3 (bIF-3) [Desulfobulbus propionicus DSM 2032] Length = 182 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQE LDLVE+ P VC+I++ K RY ++K EA+KKQ +E+K RP Sbjct: 47 LEAAQEQGLDLVEVSDKADPPVCRIMNFDKFRYELKKKQQEAKKKQTVIETREIKFRPKT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCE 119 + HDL K++ I FL + KVK++++FRGREI++ +G + L+ I + E I E Sbjct: 107 EEHDLNFKIRKIKEFLAEKNKVKVTMRFRGREIVYAQTIGLDALTKIADTLREDCVIIQE 166 Query: 120 PKFEGRQMIMILSSKC 135 PK EGRQ++M + K Sbjct: 167 PKMEGRQLVMFVGPKA 182 >gi|90021225|ref|YP_527052.1| translation initiation factor IF-3 [Saccharophagus degradans 2-40] gi|89950825|gb|ABD80840.1| bacterial translation initiation factor 3 (bIF-3) [Saccharophagus degradans 2-40] Length = 182 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 54/126 (42%), Positives = 79/126 (62%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV I + P VCKI+D K + +K A+KKQK +KE+K RP + D +VKL Sbjct: 55 DLVLIAADADPVVCKIMDYGKHLFEAKKAKAAAKKKQKQQQVKEMKFRPGTEEGDYKVKL 114 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 K + FL G K K+S+++RGRE+ HQ+LG E++ I+ EI ++ PK EGRQ+IM Sbjct: 115 KNLQRFLEQGDKAKVSLRYRGREMAHQELGMEMMKRIEVDLAEIGTVEQYPKMEGRQLIM 174 Query: 130 ILSSKC 135 +++ K Sbjct: 175 VIAPKK 180 >gi|126667901|ref|ZP_01738866.1| Translation initiation factor 3 (IF-3) [Marinobacter sp. ELB17] gi|126627561|gb|EAZ98193.1| Translation initiation factor 3 (IF-3) [Marinobacter sp. ELB17] Length = 134 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 86/133 (64%), Gaps = 1/133 (0%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+EA LDLV++ P VCKI+D K + +K A+KKQ+ T +KE+K RP + Sbjct: 1 MAEEATLDLVQVT-DSDPIVCKIMDYGKKIFDEKKAKAVAKKKQRQTQVKELKFRPGTEE 59 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D QVKL+ + FL G + KI+V+FRGRE+ HQ++G +L+ I+ E++ ++ PK Sbjct: 60 GDYQVKLRNLVRFLEAGDRGKITVRFRGREMAHQEIGMKLMERIEVDMEEMATVEMRPKM 119 Query: 123 EGRQMIMILSSKC 135 EGRQM MI++ + Sbjct: 120 EGRQMTMIIAPRK 132 >gi|257066832|ref|YP_003153088.1| translation initiation factor IF-3 [Anaerococcus prevotii DSM 20548] gi|256798712|gb|ACV29367.1| translation initiation factor IF-3 [Anaerococcus prevotii DSM 20548] Length = 184 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA ++ LDLV + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 46 LDMAYDSKLDLVLMSPKAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNAQLKETRFSLNI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K G+ ++ +P Sbjct: 106 EDNDLQTKANQSMKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFKTMLGDSYKVSKKP 165 Query: 121 KFEGRQMIMILSS 133 K EGR ++M L Sbjct: 166 KMEGRSLVMFLEP 178 >gi|311747150|ref|ZP_07720935.1| translation initiation factor IF-3 [Algoriphagus sp. PR1] gi|126578859|gb|EAZ83023.1| translation initiation factor IF-3 [Algoriphagus sp. PR1] Length = 184 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 75/135 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE +LDLVEI +V P VCKILD K +Y +K E + +KE++ P Sbjct: 47 IRLAQENDLDLVEISPNVDPPVCKILDYAKFKYEQKKKQKEIKANAAKVVLKEIRFGPNT 106 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+K FL++G KVK V F GR I+ ++ G LL + E ++ P Sbjct: 107 DDHDFNFKVKHAINFLKEGAKVKAYVHFVGRTIVFKERGEMLLLKFAQALEEYGAVEQLP 166 Query: 121 KFEGRQMIMILSSKC 135 K EG++M + ++ K Sbjct: 167 KMEGKRMNIFVAPKA 181 >gi|58700090|ref|ZP_00374623.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533394|gb|EAL57860.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 144 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 130 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 131 KREGNQYFLALVAK 144 >gi|94499190|ref|ZP_01305728.1| Translation initiation factor 3 (IF-3) [Oceanobacter sp. RED65] gi|94428822|gb|EAT13794.1| Translation initiation factor 3 (IF-3) [Oceanobacter sp. RED65] Length = 140 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 1/124 (0%) Query: 10 DLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKL 69 DLV+I P VCKI+D K Y +K A+KKQ T +KE+K RP + D QVKL Sbjct: 14 DLVQIS-DGDPIVCKIMDYGKKLYEEKKAKAAAKKKQVQTQVKEIKFRPGTEEGDYQVKL 72 Query: 70 KAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 + + FL G K KI+++FRGRE+ HQ+LG +LL ++E +++ ++ PK EGRQ+ M Sbjct: 73 RNLIKFLEHGDKAKITLRFRGREMAHQELGMQLLKRVEEDLQDLANVELRPKMEGRQLTM 132 Query: 130 ILSS 133 +L+ Sbjct: 133 VLAP 136 >gi|253582912|ref|ZP_04860130.1| initiation factor IF3 [Fusobacterium varium ATCC 27725] gi|317062927|ref|ZP_07927412.1| translation initiation factor IF-3 [Fusobacterium ulcerans ATCC 49185] gi|251835118|gb|EES63661.1| initiation factor IF3 [Fusobacterium varium ATCC 27725] gi|313688603|gb|EFS25438.1| translation initiation factor IF-3 [Fusobacterium ulcerans ATCC 49185] Length = 169 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VCKI+D K RY + A EA+K QK IKEVK+ I Sbjct: 36 LELARQEDLDLVEISPTAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQVVIKEVKVTARI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I+ FL KVK+++ GRE MH LG + L+ I E+F E++ D Sbjct: 96 DTHDLETKMGQIEKFLSKENKVKVTLVLFGRERMHATLGIDTLNEIAEKFAEVADADK-- 153 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 154 KYNEKQKHIILTPKK 168 >gi|210615124|ref|ZP_03290455.1| hypothetical protein CLONEX_02671 [Clostridium nexile DSM 1787] gi|210150432|gb|EEA81441.1| hypothetical protein CLONEX_02671 [Clostridium nexile DSM 1787] Length = 164 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 47/123 (38%), Positives = 76/123 (61%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V+I + P VCKI+D K RY + + EA+KKQK+ +KEV++ P ID +DL K+ Sbjct: 41 VKIAPTAKPPVCKIIDYGKYRYELARKEKEAKKKQKTVEVKEVRLSPNIDTNDLNTKVNN 100 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F++ G KVK++++FRGRE+ H + +L + E +++ I+ K EGR + M+L Sbjct: 101 AKKFIQKGNKVKVTLRFRGREMAHMQTSKHILDDFAEMLKDVAAIEKPAKLEGRSISMVL 160 Query: 132 SSK 134 + K Sbjct: 161 TEK 163 >gi|114799954|ref|YP_759158.1| translation initiation factor IF-3 [Hyphomonas neptunium ATCC 15444] gi|122942761|sp|Q0C535|IF3_HYPNA RecName: Full=Translation initiation factor IF-3 gi|114740128|gb|ABI78253.1| translation initiation factor IF-3 [Hyphomonas neptunium ATCC 15444] Length = 180 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 89/126 (70%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVE+ + V KILD KLR+ +K ARKKQKS+ +KE+K+RP ID HD +VK Sbjct: 55 MDLVEVSAGQETPVVKILDYGKLRFEERKKKAAARKKQKSSELKEIKIRPNIDTHDYEVK 114 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 +AI F +G KVKI+++FRGRE+ HQ LG ELL +K+ F E ++++ EPK EG+QM Sbjct: 115 ARAIARFFEEGDKVKITLRFRGREMAHQHLGMELLEKVKKDFEETAKVELEPKLEGKQMT 174 Query: 129 MILSSK 134 M+L+ + Sbjct: 175 MVLAPR 180 >gi|15224088|ref|NP_179984.1| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|3738333|gb|AAC63674.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|18176092|gb|AAL59982.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|20465301|gb|AAM20054.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|21593709|gb|AAM65676.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana] gi|330252430|gb|AEC07524.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 312 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV + P V K++D K RY QK + +KK +KE+KM I Sbjct: 119 VRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDLKELKMGYNI 178 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L+A FL+DG KVK+ V +GRE +++ ELL + GE++ + + Sbjct: 179 DQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESK- 237 Query: 121 KFEGRQMIMILSS 133 F R M +IL Sbjct: 238 NFRDRNMFIILVP 250 >gi|289422399|ref|ZP_06424245.1| translation initiation factor IF-3 [Peptostreptococcus anaerobius 653-L] gi|289157234|gb|EFD05853.1| translation initiation factor IF-3 [Peptostreptococcus anaerobius 653-L] Length = 135 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 82/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M+MA + NLDL I + P VC+I+D K RY + EA+KKQK +KEV++RP I Sbjct: 1 MEMAAKKNLDLAMISPNAEPPVCRIMDYGKFRYEQARKEKEAKKKQKVVVVKEVRLRPGI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL+ K FL+ G KVK+ ++FRGRE+ H+D+G+E++ E E + P Sbjct: 61 GDNDLKTKSNNAIKFLQKGDKVKVELRFRGRELGHKDIGKEVMMKFIELVSEFGEPNKAP 120 Query: 121 KFEGRQMIMILSSKC 135 KFEG M++I+ K Sbjct: 121 KFEGNNMVVIIDPKK 135 >gi|58584730|ref|YP_198303.1| translation initiation factor 3, IF-3 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419046|gb|AAW71061.1| Translation initiation factor 3, IF-3 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 169 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQ LDLVE+ P VCKILD K +Y +K A EA+KKQK+ IKE+K+ P I Sbjct: 36 LTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ FL G K+K+++KF+GRE+++ ++G E L + +I++I+ P Sbjct: 96 GDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAP 155 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L++K Sbjct: 156 KREGNQYFLALTTK 169 >gi|225630644|ref|YP_002727435.1| translation initiation factor IF-3 [Wolbachia sp. wRi] gi|225592625|gb|ACN95644.1| translation initiation factor IF-3 [Wolbachia sp. wRi] Length = 172 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 86/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 99 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 159 KREGNQYFLALVAK 172 >gi|118474606|ref|YP_892821.1| translation initiation factor IF-3 [Campylobacter fetus subsp. fetus 82-40] gi|166198951|sp|A0RRI8|IF3_CAMFF RecName: Full=Translation initiation factor IF-3 gi|118413832|gb|ABK82252.1| translation initiation factor IF-3 [Campylobacter fetus subsp. fetus 82-40] Length = 172 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 71/134 (52%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A LDLV I P VCKI+D K RY +K EA+KKQK +KE+K+ I Sbjct: 38 DIANRMGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIEVKEIKLSVKIA 97 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K FL +G VK V +GRE+ D+G +L I E + + D P Sbjct: 98 QNDINYKIKHAQEFLEEGKHVKFRVFLKGREMATPDIGVVMLERIWELVKDYADRDKVPA 157 Query: 122 FEGRQMIMILSSKC 135 EGR + M+++ K Sbjct: 158 LEGRYVNMLVTPKK 171 >gi|225445818|ref|XP_002276984.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743667|emb|CBI36550.3| unnamed protein product [Vitis vinifera] Length = 272 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRP 58 +QMA++A LDLV + P V +I+D K RY +QK +KK +KE+KM Sbjct: 112 IQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGY 171 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+LKA FL+DG KVKI V +GRE +++ EL+ + GE++ + Sbjct: 172 NIDSHDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEES 231 Query: 119 EPKFEGRQMIMILSSKCV 136 + F R + ++L Sbjct: 232 K-NFSVRNIFIVLVPNKA 248 >gi|163784104|ref|ZP_02179052.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] gi|159880632|gb|EDP74188.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1] Length = 139 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRP 58 M++A++ NLDLVEI P VCKI+D K ++ +K EA+KKQ +KE+K Sbjct: 1 MRIAEDRNLDLVEISPKANPPVCKIMDYGKYKFEQKKKEKEAKKKQRAHMQHVKEMKFGL 60 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I+ HD + K+K I FL DG KVK+ + FRGRE +H ++G++L I E E+ +++ Sbjct: 61 KIEKHDYETKVKHIREFLEDGDKVKVIIMFRGRENVHPEIGQQLAERIIEDVKEVGKVEK 120 Query: 119 EPKFEGRQMIMILSS 133 +PK EGR MI L Sbjct: 121 QPKKEGRNMIFTLVP 135 >gi|326382697|ref|ZP_08204388.1| translation initiation factor IF-3 [Gordonia neofelifaecis NRRL B-59395] gi|326198816|gb|EGD55999.1| translation initiation factor IF-3 [Gordonia neofelifaecis NRRL B-59395] Length = 126 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 63/111 (56%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 CKI+D K +Y + E+R+ Q+ T IKE K+RP ID HD + K + FL G KV Sbjct: 2 CKIMDYGKFKYEAAQKKRESRRNQQMTVIKEQKLRPKIDDHDYETKKGHVIRFLEAGSKV 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 K+++ FRGRE +LG LL + + E ++ K +GR M M+L+ Sbjct: 62 KVTIMFRGREQSRPELGYRLLQRLGDDVAEYGFVETSAKQDGRNMTMVLAP 112 >gi|110638046|ref|YP_678254.1| translation initiation factor IF-3 [Cytophaga hutchinsonii ATCC 33406] gi|110280727|gb|ABG58913.1| bacterial translation initiation factor 3 (bIF-3) [Cytophaga hutchinsonii ATCC 33406] Length = 186 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ NLDLVEI + P VCK+ D K +Y +K E + KQ +KE++ P Sbjct: 48 LNIAKAQNLDLVEISPNADPPVCKVTDYSKFKYEQKKKQKELKAKQHKVVVKEIRFGPNT 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK FL+DG KVK V F GR I++++ G +L + E+++++ P Sbjct: 108 DEHDYEFKLKHAFEFLKDGFKVKAYVHFVGRTIVYKERGEIMLLKFAQALEELAKVEEMP 167 Query: 121 KFEGRQMIMILSSKC 135 + EG++M ++L+ K Sbjct: 168 RLEGKRMFLMLTPKA 182 >gi|257468672|ref|ZP_05632766.1| protein translation initiation factor 3 [Fusobacterium ulcerans ATCC 49185] Length = 140 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ +LDLVEI + P VCKI+D K RY + A EA+K QK IKEVK+ I Sbjct: 7 LELARQEDLDLVEISPTAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQVVIKEVKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I+ FL KVK+++ GRE MH LG + L+ I E+F E++ D Sbjct: 67 DTHDLETKMGQIEKFLSKENKVKVTLVLFGRERMHATLGIDTLNEIAEKFAEVADADK-- 124 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 125 KYNEKQKHIILTPKK 139 >gi|157736343|ref|YP_001489026.1| translation initiation factor IF-3 [Arcobacter butzleri RM4018] gi|315635478|ref|ZP_07890744.1| translation initiation factor IF3 [Arcobacter butzleri JV22] gi|157698197|gb|ABV66357.1| translation initiation factor IF-3 [Arcobacter butzleri RM4018] gi|315480236|gb|EFU70903.1| translation initiation factor IF3 [Arcobacter butzleri JV22] Length = 175 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 74/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLV I P V KI+D K RY +K EA+K QK IKE+K+ I Sbjct: 40 LALADEMGLDLVLIAPDGKPPVAKIMDYGKFRYQQEKKKKEAKKNQKVIVIKEIKLSVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G V+ V +GRE+ + G ++L+ I +I+ +D EP Sbjct: 100 AENDVNYKVKHAREFLEEGNHVRFRVFLKGREMANPQSGIDVLNKIWPMVEDIAVMDKEP 159 Query: 121 KFEGRQMIMILSSKC 135 K EGR + +++ K Sbjct: 160 KLEGRYVNLLVLPKK 174 >gi|42520790|ref|NP_966705.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|99035130|ref|ZP_01314913.1| hypothetical protein Wendoof_01000243 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225631348|ref|ZP_03788018.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|42410530|gb|AAS14639.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225590953|gb|EEH12165.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 172 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LEFAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ P Sbjct: 99 GDHDYGTKLRQARDLLAHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L +K Sbjct: 159 KREGNQYFLALVAK 172 >gi|315917511|ref|ZP_07913751.1| translation initiation factor IF-3 [Fusobacterium gonidiaformans ATCC 25563] gi|317059029|ref|ZP_07923514.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_5R] gi|313684705|gb|EFS21540.1| translation initiation factor IF-3 [Fusobacterium sp. 3_1_5R] gi|313691386|gb|EFS28221.1| translation initiation factor IF-3 [Fusobacterium gonidiaformans ATCC 25563] Length = 179 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 46 LEIAANQDLDLVEIAATAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTVVKEVKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+ I FL KVK+++ GRE MH LG L + E+F E + +D Sbjct: 106 DAHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEVAEKFAETADVDK-- 163 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 164 KYAEKQKHIILTPKK 178 >gi|296271846|ref|YP_003654477.1| translation initiation factor IF-3 [Arcobacter nitrofigilis DSM 7299] gi|296096021|gb|ADG91971.1| translation initiation factor IF-3 [Arcobacter nitrofigilis DSM 7299] Length = 175 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 69/135 (51%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E LDLV I P V KI+D K +Y +K EARK QK +KEVK I Sbjct: 40 LKTADEQGLDLVLIAPEGKPPVAKIMDYSKFKYQQEKKKKEARKNQKVIVLKEVKFSVKI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ H + G E+L + + D EP Sbjct: 100 AENDINYKVKHAIEFLEKGFHVKCRVFLKGREMAHPEAGVEVLEKVWPMLEDYGDRDSEP 159 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M++ K Sbjct: 160 KLEGRFVNMMVLPKK 174 >gi|237737796|ref|ZP_04568277.1| translation initiation factor 3 [Fusobacterium mortiferum ATCC 9817] gi|229419676|gb|EEO34723.1| translation initiation factor 3 [Fusobacterium mortiferum ATCC 9817] Length = 172 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLVEI ++ P VCKI+D K RY + A EA+K QK T +KEVK+ I Sbjct: 40 LELARQEGLDLVEIAATAKPPVCKIMDFGKYRYEQTRKAKEAKKNQKQTVVKEVKVTARI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ K+ I FL KVK+++ GRE MH LG + L I E+F EI+ D Sbjct: 100 DSHDLETKMSQIKKFLEKENKVKVTLVLFGREKMHATLGVDTLDEIAEKFAEIAEADK-- 157 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +ILS K Sbjct: 158 KYNDKQKHIILSPKK 172 >gi|116512720|ref|YP_811627.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris SK11] gi|116108374|gb|ABJ73514.1| bacterial translation initiation factor 3 (bIF-3) [Lactococcus lactis subsp. cremoris SK11] Length = 216 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ N+DLV I + P V KI+D K + +K EA+KKQ +KEV++ PVI Sbjct: 82 LMQAENLNMDLVLIS-NQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVI 140 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+ FL G KVK+S++F+GR I HQD+GR+++ E E++ ++ Sbjct: 141 DQNDFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAEATKEVAVVEQRA 200 Query: 121 KFEGRQMIMILSS 133 K +GRQM + L+ Sbjct: 201 KMDGRQMFLQLAP 213 >gi|162447701|ref|YP_001620833.1| translation initiation factor IF-3 [Acholeplasma laidlawii PG-8A] gi|161985808|gb|ABX81457.1| translation initiation factor IF-3 [Acholeplasma laidlawii PG-8A] Length = 179 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDS-SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +++A+E ++D++ + + P V K+LD K RY QK E +K Q+ +KE+K+ P Sbjct: 40 LEIARERDIDILVVSPENAKPMVAKLLDYSKHRYDQQKKLKEMKKNQQIVKLKEIKLSPT 99 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 ID HD KL+ F+ G K+K+S++FRGR I H+D+G E ++ E + ++ + Sbjct: 100 IDKHDFDTKLRNAQKFINGGDKLKVSLRFRGRMITHKDIGFEQVNKFVELLQGV-VVESQ 158 Query: 120 PKFEGRQMIMILSS 133 PK EG Q+I I++ Sbjct: 159 PKLEGMQIIAIIAP 172 >gi|313681238|ref|YP_004058976.1| bacterial translation initiation factor 3 (bif-3) [Sulfuricurvum kujiense DSM 16994] gi|313154098|gb|ADR32776.1| bacterial translation initiation factor 3 (bIF-3) [Sulfuricurvum kujiense DSM 16994] Length = 176 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 65/135 (48%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M A E LDLV I P V KI+D K Y +K EARKKQ +KE+K+ I Sbjct: 38 MNKANEMGLDLVLISPDAKPPVAKIMDYGKFHYQEEKKKKEARKKQTKVEVKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G V V RGRE+ H + +L + +I + P Sbjct: 98 ADNDVGYKVKHAREFLEEGKHVHFRVFLRGREMAHPESAVAVLQRVWPMVEDIGTMYKAP 157 Query: 121 KFEGRQMIMILSSKC 135 + EGR M++ K Sbjct: 158 QMEGRYCNMMIHPKK 172 >gi|309778344|ref|ZP_07673270.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 3_1_53] gi|313899539|ref|ZP_07833048.1| translation initiation factor IF-3 [Clostridium sp. HGF2] gi|308913910|gb|EFP59724.1| translation initiation factor IF-3 [Erysipelotrichaceae bacterium 3_1_53] gi|312955646|gb|EFR37305.1| translation initiation factor IF-3 [Clostridium sp. HGF2] Length = 186 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 81/135 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDL+ + P VCK+LD + R+ QK A EA+KKQ T IK +++ PVI Sbjct: 51 LEIAYRQELDLLCVAPKGQPPVCKVLDYGRYRFEQQKKAKEAKKKQHVTEIKPIRLSPVI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K++ ++ DG KVK+ ++FRGR I ++G++++++ E +I+ I+ P Sbjct: 111 DKHDFDTKMRHARKWIEDGMKVKVDMRFRGRLITRLEVGKKIMNSFTEEISDIAIIEKRP 170 Query: 121 KFEGRQMIMILSSKC 135 EG M +L+ K Sbjct: 171 ILEGNTMSCVLAPKK 185 >gi|223039228|ref|ZP_03609518.1| translation initiation factor IF-3 [Campylobacter rectus RM3267] gi|255323682|ref|ZP_05364812.1| translation initiation factor IF-3 [Campylobacter showae RM3277] gi|222879589|gb|EEF14680.1| translation initiation factor IF-3 [Campylobacter rectus RM3267] gi|255299396|gb|EET78683.1| translation initiation factor IF-3 [Campylobacter showae RM3277] Length = 171 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 78/134 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P VCKI+D K RY +K EA+KKQK+ +KE+K+ I Sbjct: 37 LKIAEKMGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEVKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL +G VK V +GRE+ + + G +L + E ++S D EP Sbjct: 97 AQNDINYKVKHALEFLEEGKHVKFRVFLKGREMSNPEAGVAMLQKVWEMVKDVSDRDKEP 156 Query: 121 KFEGRQMIMILSSK 134 EGR + M+++ K Sbjct: 157 LLEGRYVNMLVTPK 170 >gi|190571397|ref|YP_001975755.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018796|ref|ZP_03334604.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357669|emb|CAQ55113.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995747|gb|EEB56387.1| translation initiation factor IF-3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 172 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 89/134 (66%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ NLDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 39 LEVAQSVNLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD + KL+ FL G ++K++++FRGRE+++ ++G + L + +I++++ P Sbjct: 99 GDHDYETKLRQARDFLVHGHRIKVTMRFRGRELVNTEVGLKKLERLIRDAEDIAKVELAP 158 Query: 121 KFEGRQMIMILSSK 134 K EG Q + L++K Sbjct: 159 KREGNQYSLTLAAK 172 >gi|326803828|ref|YP_004321646.1| translation initiation factor IF-3 [Aerococcus urinae ACS-120-V-Col10a] gi|326650733|gb|AEA00916.1| translation initiation factor IF-3 [Aerococcus urinae ACS-120-V-Col10a] Length = 111 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 69/109 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K RY Q+ A E RK QK+ +KE+++ P ID +D Q K++ F+ G KVK+S Sbjct: 1 MDYGKYRYQQQRKAREQRKNQKTIQVKEIRLSPTIDENDFQTKVRQGKKFIDKGDKVKVS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGR I H+DLGRE+L +++ ++ +PK EGR M + L+ K Sbjct: 61 IRFRGRAITHKDLGREVLERFASELADVATVEQKPKMEGRSMQLQLAPK 109 >gi|309782528|ref|ZP_07677251.1| translation initiation factor IF-3 [Ralstonia sp. 5_7_47FAA] gi|308918619|gb|EFP64293.1| translation initiation factor IF-3 [Ralstonia sp. 5_7_47FAA] Length = 112 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 70/110 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y QK A +A+ KQK +KEVK RP D +D VKL+ FL DG +VK++ Sbjct: 1 MDYGKFKYQEQKKAHDAKLKQKVIQVKEVKFRPGTDDNDYGVKLRNATRFLEDGDRVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ+LG +L IK E +++ PK EGRQ +M+L+ K Sbjct: 61 LRFRGREMAHQELGMRVLERIKSDLEEFGQVEQMPKMEGRQAVMMLAPKK 110 >gi|47097525|ref|ZP_00235064.1| translation initiation factor IF-3 [Listeria monocytogenes str. 1/2a F6854] gi|47014108|gb|EAL05102.1| translation initiation factor IF-3 [Listeria monocytogenes str. 1/2a F6854] Length = 112 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 41/108 (37%), Positives = 64/108 (59%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D R+ QK EARK QK +KEV++ P ID HD KL+ FL G KVK S Sbjct: 1 MDYGIFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 ++F+GR I H+++G+++L + ++ I+ PK +GR M ++L+ Sbjct: 61 IRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 108 >gi|50365004|ref|YP_053429.1| translation initiation factor IF-3 [Mesoplasma florum L1] gi|81695690|sp|Q6F1S8|IF3_MESFL RecName: Full=Translation initiation factor IF-3 gi|50363560|gb|AAT75545.1| translation initiation factor IF-3 [Mesoplasma florum L1] Length = 180 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +Q+A+E LDL+++ ++CKILD K RY QK EA+K Q KE+++ Sbjct: 45 IQLAEEKGLDLMQVGQQPDGLAICKILDYGKFRYQQQKKNKEAKKNQVKVENKEIRLTVN 104 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 I HDL K K FL G +VKIS+KF+GREI + DLG+E L + +I++I+ E Sbjct: 105 IGQHDLVTKAKKAREFLEAGDRVKISLKFKGREIAYMDLGKETLDRFYKEIEDIAKIEKE 164 Query: 120 PKFEGRQMIMILSSKC 135 K R + M + K Sbjct: 165 AKLTSRFLDMYVVPKK 180 >gi|14194835|sp|Q9MS97|IF3C_GALSU RecName: Full=Translation initiation factor IF-3, chloroplastic gi|8925953|gb|AAF81685.1|AF233069_8 translation initiation factor IF-3 [Galdieria sulphuraria] Length = 181 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 80/136 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E NLDLV I+ P V +I+D K ++ +K + EA+KKQ +KE+KMR I Sbjct: 46 LKLAEEKNLDLVLINDKTEPPVVRIIDYGKFKFAQEKKSREAKKKQHQVTVKEIKMRYKI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD QV++ FL+ G KVKIS+ F+GREI + DL +L+ I ++ + Sbjct: 106 EDHDYQVRINQAIKFLKLGNKVKISLTFKGREIQYIDLAEKLIEKIIHSLSSLAEHEKVF 165 Query: 121 KFEGRQMIMILSSKCV 136 EG+ + ++L K Sbjct: 166 DKEGKNIYIMLLPKKT 181 >gi|262066670|ref|ZP_06026282.1| translation initiation factor IF-3 [Fusobacterium periodonticum ATCC 33693] gi|291379629|gb|EFE87147.1| translation initiation factor IF-3 [Fusobacterium periodonticum ATCC 33693] Length = 141 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 54/136 (39%), Positives = 76/136 (55%), Gaps = 2/136 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A DLVEI TP VCK++D K +Y + EA+K QK IKE+K+ I Sbjct: 7 LNLASSQGYDLVEIAPGATPPVCKVMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL+ KL ++ FL KVKI++ GRE MH +LG L I E+F E + ++ Sbjct: 67 DSHDLETKLNQVNKFLEKENKVKITLVLFGREKMHANLGVTTLDEIAEKFAETAEVEK-- 124 Query: 121 KFEGRQMIMILSSKCV 136 K+ +Q +ILS K Sbjct: 125 KYADKQKHLILSPKKA 140 >gi|167816070|ref|ZP_02447750.1| translation initiation factor IF-3 [Burkholderia pseudomallei 91] Length = 123 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPKK 110 >gi|125624804|ref|YP_001033287.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris MG1363] gi|124493612|emb|CAL98599.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris MG1363] gi|300071603|gb|ADJ61003.1| translation initiation factor IF-3 [Lactococcus lactis subsp. cremoris NZ9000] Length = 216 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ N+DLV I + P V KI+D K + +K EA+KKQ +KEV++ PVI Sbjct: 82 LMQAENLNMDLVLIS-NQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVI 140 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+ FL G KVK+S++F+GR I HQD+GR+++ E E++ ++ Sbjct: 141 DQNDFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAEATKEVAVVEQRA 200 Query: 121 KFEGRQMIMILSS 133 K +GRQM + L+ Sbjct: 201 KMDGRQMFLQLAP 213 >gi|237747668|ref|ZP_04578148.1| translation initiation factor IF-3 [Oxalobacter formigenes OXCC13] gi|229379030|gb|EEO29121.1| translation initiation factor IF-3 [Oxalobacter formigenes OXCC13] Length = 112 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 72/110 (65%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y QK A EA+ KQK +KE+K RP D D +KL+ + FL DG K K++ Sbjct: 1 MDYGKFKYAEQKKAHEAKLKQKVVSVKEIKFRPGTDEGDYNIKLRNLIKFLEDGDKCKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQD+G +L +K+ ++ +++ PK EGRQM+M+L+ K Sbjct: 61 LRFRGREMAHQDIGFRMLERLKQDLDDVGQVEQFPKMEGRQMVMVLAPKK 110 >gi|124009348|ref|ZP_01694026.1| translation initiation factor IF-3 [Microscilla marina ATCC 23134] gi|123985010|gb|EAY24961.1| translation initiation factor IF-3 [Microscilla marina ATCC 23134] Length = 193 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 65/124 (52%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI P VCK++D K RY +K E + K + +KE++ P D HD K Sbjct: 1 MDLVEISPKAAPPVCKVIDYSKFRYDQKKKQKELKAKAQKVVMKEIRFGPNTDEHDFNFK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 L FL G K+K V F GR I+ ++ G +LL + +++ PK EG++M Sbjct: 61 LNHAKNFLESGAKLKAYVHFVGRTIVFKERGEQLLLKFALELEDYGKVEQLPKLEGKRMS 120 Query: 129 MILS 132 + L+ Sbjct: 121 IFLA 124 >gi|255585038|ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis] gi|223526947|gb|EEF29148.1| translation initiation factor if-3, putative [Ricinus communis] Length = 274 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR--KKQKSTGIKEVKMRP 58 +QMA+ A LDLV + P V +I+D K RY +QK + +KE+KM Sbjct: 114 IQMAENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGY 173 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL+DG KVK+ V +GRE +++ EL+ + GE++ + Sbjct: 174 NIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEET 233 Query: 119 EPKFEGRQMIMILSSKCV 136 + F R + + L+ Sbjct: 234 K-NFRDRNIFITLAPNKA 250 >gi|154175144|ref|YP_001407385.1| translation initiation factor IF-3 [Campylobacter curvus 525.92] gi|166198950|sp|A7GVZ3|IF3_CAMC5 RecName: Full=Translation initiation factor IF-3 gi|153793186|gb|EAT99714.2| translation initiation factor IF-3 [Campylobacter curvus 525.92] Length = 172 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAEKQGLDLVLVAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIEIKEIKLSIKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E +++ D EP Sbjct: 97 AQNDINYKVKHAVEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWELVKDVADRDKEP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+++ K Sbjct: 157 LVEGRYVNMLVTPKK 171 >gi|167587362|ref|ZP_02379750.1| translation initiation factor IF-3 [Burkholderia ubonensis Bu] Length = 112 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKK 110 >gi|297821667|ref|XP_002878716.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp. lyrata] gi|297324555|gb|EFH54975.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp. lyrata] Length = 292 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA +A LDLV + P V K++D K RY QK + +KK +KE+KM I Sbjct: 121 VRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDLKELKMGYNI 180 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+L+A FL+DG KVK+ V +GRE +++ ELL + GE++ + + Sbjct: 181 DQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESK- 239 Query: 121 KFEGRQMIMILSS 133 F R + +IL Sbjct: 240 NFRDRNLFIILVP 252 >gi|306820006|ref|ZP_07453656.1| translation initiation factor IF3 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551954|gb|EFM39895.1| translation initiation factor IF3 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 158 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 1/133 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A NLDLV+I + P VCKI+D K +Y + K E++KKQK +KE+++RP+ID Sbjct: 21 NLALSKNLDLVKISPNSNPPVCKIMDFGKYKYELAKKEKESKKKQKIVSVKEIRLRPMID 80 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE-ISRIDCEP 120 HDL+ K FL G K+K++++FRGRE+ H+++G +++ E + + I +P Sbjct: 81 KHDLETKANMAKKFLEAGDKLKVTIRFRGRELGHKEMGNQVIEKFVELIKDNAAPIGTKP 140 Query: 121 KFEGRQMIMILSS 133 EG MI+I+ Sbjct: 141 HLEGNSMILIVDP 153 >gi|57168348|ref|ZP_00367482.1| translation initiation factor IF-3 [Campylobacter coli RM2228] gi|57020156|gb|EAL56830.1| translation initiation factor IF-3 [Campylobacter coli RM2228] Length = 165 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 30 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 90 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEP 149 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 150 NFEGRYVNMLVTPKKA 165 >gi|183221770|ref|YP_001839766.1| translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911844|ref|YP_001963399.1| translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687806|sp|B0SKZ7|IF3_LEPBP RecName: Full=Translation initiation factor IF-3 gi|238687834|sp|B0SCH4|IF3_LEPBA RecName: Full=Translation initiation factor IF-3 gi|167776520|gb|ABZ94821.1| Translation initiation factor 3 (IF-3) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780192|gb|ABZ98490.1| Translation initiation factor IF-3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 187 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 85/133 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+EANLDLVE+ VCK++D K ++ + K EA+KKQ +KE+K+RP I Sbjct: 48 LRRAKEANLDLVEVSGDQDVHVCKLIDFGKYKFELLKKTKEAKKKQHVVTVKEIKIRPRI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD ++K + FL+ G KVK++++FRGRE++H ++G +++ E E + + P Sbjct: 108 DNHDFEIKKRHALEFLQKGDKVKVTLRFRGREMVHSEIGMNIVNRFVEDLKEHASPEKMP 167 Query: 121 KFEGRQMIMILSS 133 +G+ ++++++ Sbjct: 168 VHDGKTIVVVMNP 180 >gi|24213942|ref|NP_711423.1| translation initiation factor IF-3 [Leptospira interrogans serovar Lai str. 56601] gi|45658305|ref|YP_002391.1| translation initiation factor IF-3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|29427482|sp|Q8F6Q9|IF3_LEPIN RecName: Full=Translation initiation factor IF-3 gi|59798052|sp|Q72PK8|IF3_LEPIC RecName: Full=Translation initiation factor IF-3 gi|24194799|gb|AAN48441.1| translation initiation factor IF-3 [Leptospira interrogans serovar Lai str. 56601] gi|45601547|gb|AAS71028.1| translation initiation factor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 179 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 88/134 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E NLDLVE+ + VCKI+D K ++ + K + EA+KKQ +KE+K+RP I Sbjct: 46 LRKAKEENLDLVEVSADQELHVCKIIDYGKYKFELLKKSKEAKKKQHVINVKEIKIRPRI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD ++K K FL G KVK+S++FRGRE+MH DLG +++ + E E + +P Sbjct: 106 ESHDYEIKKKHAQEFLGKGDKVKVSLRFRGREMMHSDLGMKVVYRMIEDLKEHGTAERDP 165 Query: 121 KFEGRQMIMILSSK 134 +G+Q+++I++ K Sbjct: 166 IQDGKQIVVIINPK 179 >gi|224143922|ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1| predicted protein [Populus trichocarpa] Length = 278 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKK--QKSTGIKEVKMRP 58 +QMA++ L+LV + P V +I+D K RY QK +KK +KE+KM Sbjct: 118 IQMAEDTELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGY 177 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+L+A FL+DG KVK+ V +GRE ++ ELL + GE++ + Sbjct: 178 NIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEES 237 Query: 119 EPKFEGRQMIMILSSKCV 136 + F R + L Sbjct: 238 K-NFRDRNAFITLVPNKA 254 >gi|116328739|ref|YP_798459.1| translation initiation factor IF-3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330604|ref|YP_800322.1| translation initiation factor IF-3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281641|sp|Q04U56|IF3_LEPBJ RecName: Full=Translation initiation factor IF-3 gi|122283476|sp|Q04ZG9|IF3_LEPBL RecName: Full=Translation initiation factor IF-3 gi|116121483|gb|ABJ79526.1| Translation initiation factor 3 (IF-3) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124293|gb|ABJ75564.1| Translation initiation factor 3 (IF-3) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 179 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 87/134 (64%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E NLDLVE+ + VCKI+D K ++ + K EA+KKQ +KE+K+RP I Sbjct: 46 LRKAKEENLDLVEVSADQELHVCKIIDYGKYKFELLKKNKEAKKKQHVINVKEIKIRPRI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD ++K K FL G KVK+S++FRGRE+MH DLG +++ + E E + +P Sbjct: 106 ESHDYEIKKKHAQEFLGKGDKVKVSLRFRGREMMHSDLGMKVVYRMIEDLKEYGLAERDP 165 Query: 121 KFEGRQMIMILSSK 134 +G+Q+++I++ K Sbjct: 166 IQDGKQIVVIINPK 179 >gi|172040803|ref|YP_001800517.1| translation initiation factor IF-3 [Corynebacterium urealyticum DSM 7109] gi|171852107|emb|CAQ05083.1| translation initiation factor IF-3 [Corynebacterium urealyticum DSM 7109] Length = 115 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 61/108 (56%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EAR+ Q+ T +KE K RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKFKYEQAQKAREARRNQQQTVVKEQKFRPKIDDHDYETKKGNVVRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE +LG LL + E+ +++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPELGFRLLERLAADVEEVGQVESRPKQDGRNMTMVLGP 108 >gi|51245279|ref|YP_065163.1| translation initiation factor IF-3 [Desulfotalea psychrophila LSv54] gi|50876316|emb|CAG36156.1| probable translation initiation factor IF-3 [Desulfotalea psychrophila LSv54] Length = 142 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A LDLV + + P VC++++ K RY +K EA+KKQ + KE+K RP D Sbjct: 8 EIAYGEGLDLVVVSDNAEPPVCRVMNYDKFRYEQKKKQQEAKKKQTTVETKEIKFRPKTD 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCEP 120 HDL K+K + FL KVK++++FRGREI++ +G E ++ + E + I P Sbjct: 68 EHDLNFKIKNVKKFLAQKNKVKLTMRFRGREIVYSQTIGLEAMNKVVEALEGEAVILQRP 127 Query: 121 KFEGRQMIMILSSKC 135 K EGRQ++M + K Sbjct: 128 KMEGRQLVMFVGPKA 142 >gi|227488133|ref|ZP_03918449.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541530|ref|ZP_03971579.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51866] gi|227091995|gb|EEI27307.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182686|gb|EEI63658.1| translation initiation factor IF-3 [Corynebacterium glucuronolyticum ATCC 51866] Length = 114 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 61/108 (56%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EARK Q+ T +KE K+RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKYKYEQAQKAREARKNQQQTVVKEQKLRPKIDDHDYETKKGNVVRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE +LG LL + E + ++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPELGYRLLERLAEDVKDYGTVESRPKQDGRNMTMVLGP 108 >gi|167582117|ref|ZP_02374991.1| translation initiation factor IF-3 [Burkholderia thailandensis TXDOH] gi|167620275|ref|ZP_02388906.1| translation initiation factor IF-3 [Burkholderia thailandensis Bt4] gi|167719847|ref|ZP_02403083.1| translation initiation factor IF-3 [Burkholderia pseudomallei DM98] gi|167738850|ref|ZP_02411624.1| translation initiation factor IF-3 [Burkholderia pseudomallei 14] gi|167824444|ref|ZP_02455915.1| translation initiation factor IF-3 [Burkholderia pseudomallei 9] gi|167845978|ref|ZP_02471486.1| translation initiation factor IF-3 [Burkholderia pseudomallei B7210] gi|167894555|ref|ZP_02481957.1| translation initiation factor IF-3 [Burkholderia pseudomallei 7894] gi|167902958|ref|ZP_02490163.1| translation initiation factor IF-3 [Burkholderia pseudomallei NCTC 13177] gi|167911195|ref|ZP_02498286.1| translation initiation factor IF-3 [Burkholderia pseudomallei 112] gi|167919219|ref|ZP_02506310.1| translation initiation factor IF-3 [Burkholderia pseudomallei BCC215] Length = 112 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPKK 110 >gi|325479631|gb|EGC82723.1| translation initiation factor IF-3 [Anaerococcus prevotii ACS-065-V-Col13] Length = 139 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 M MA + LDLV + P V +I+D K +Y +K E RKKQK+ +KE + I Sbjct: 1 MDMAYDRKLDLVLMSPKAKPPVTRIMDYGKFKYDQEKKEKENRKKQKNAQLKETRFSLNI 60 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DLQ K FL +G KVK+S++FRGRE+ ++ G EL+ K G+ ++ +P Sbjct: 61 EDNDLQTKANQSKKFLNNGDKVKVSIRFRGRELGRKEPGYELMDKFKTMLGDSYKVTKKP 120 Query: 121 KFEGRQMIMILSS 133 K EGR ++M L Sbjct: 121 KMEGRSLVMFLEP 133 >gi|317059973|ref|ZP_07924458.1| translation initiation factor IF-3 [Fusobacterium sp. D12] gi|313685649|gb|EFS22484.1| translation initiation factor IF-3 [Fusobacterium sp. D12] Length = 179 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 46 LEIAAGQDLDLVEIAANAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTIVKEVKVTARI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL K+ I FL KVK+++ GRE MH LG L I E+F + +D Sbjct: 106 DVHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEIAEKFSANADVDK-- 163 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 164 KYAEKQKHIILTPKK 178 >gi|305432764|ref|ZP_07401923.1| translation initiation factor IF3 [Campylobacter coli JV20] gi|304444161|gb|EFM36815.1| translation initiation factor IF3 [Campylobacter coli JV20] Length = 172 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|257452488|ref|ZP_05617787.1| protein translation initiation factor 3 [Fusobacterium sp. 3_1_5R] gi|257466355|ref|ZP_05630666.1| protein translation initiation factor 3 [Fusobacterium gonidiaformans ATCC 25563] Length = 170 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 37 LEIAANQDLDLVEIAATAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTVVKEVKVTARI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HDL K+ I FL KVK+++ GRE MH LG L + E+F E + +D Sbjct: 97 DAHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEVAEKFAETADVDK-- 154 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 155 KYAEKQKHIILTPKK 169 >gi|222823075|ref|YP_002574648.1| translation initiation factor IF-3 [Campylobacter lari RM2100] gi|254803484|sp|B9KEB2|IF3_CAMLR RecName: Full=Translation initiation factor IF-3 gi|222538296|gb|ACM63397.1| translation initiation factor IF-3 [Campylobacter lari RM2100] Length = 173 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LDIANRLGLDLVMIAPEAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + G LL I + +I+ D EP Sbjct: 97 AQNDINYKVKHASEFLEQGKHVKFRVFLKGREMGSPEAGVALLEKIWQMVEDIADRDKEP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+++ K Sbjct: 157 LLEGRYVNMLVTPKK 171 >gi|283955361|ref|ZP_06372860.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 414] gi|283793121|gb|EFC31891.1| LOW QUALITY PROTEIN: translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 414] Length = 172 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +KN + +KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKNKKKQKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKIKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|15673826|ref|NP_268001.1| translation initiation factor IF-3 [Lactococcus lactis subsp. lactis Il1403] gi|281492456|ref|YP_003354436.1| translation Initiation Factor 3 [Lactococcus lactis subsp. lactis KF147] gi|12724874|gb|AAK05942.1|AE006414_8 translation initiation factor IF-3 [Lactococcus lactis subsp. lactis Il1403] gi|281376120|gb|ADA65611.1| Translation Initiation Factor 3 (IF-3) [Lactococcus lactis subsp. lactis KF147] gi|326407335|gb|ADZ64406.1| translation initiation factor IF-3 [Lactococcus lactis subsp. lactis CV56] Length = 164 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ N+DLV I + P V KI+D K + +K EA+KKQ +KEV++ PVI Sbjct: 30 LMQAENLNMDLVLIS-NQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+ FL G KVK+S++F+GR I HQD+GR+++ + E++ ++ Sbjct: 89 DQNDFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAQATKEVAVVEQRA 148 Query: 121 KFEGRQMIMILSS 133 K +GRQM + L+ Sbjct: 149 KMDGRQMFLQLAP 161 >gi|167836851|ref|ZP_02463734.1| translation initiation factor IF-3 [Burkholderia thailandensis MSMB43] Length = 112 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K EA+ KQK +KEVK RP D D VKL+ + FL +G K KI+ Sbjct: 1 MDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLMRFLEEGDKTKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 61 LRFRGREMAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPKK 110 >gi|32477372|ref|NP_870366.1| translation initiation factor IF-3 [Rhodopirellula baltica SH 1] gi|39931221|sp|Q7UJ17|IF3_RHOBA RecName: Full=Translation initiation factor IF-3 gi|32447923|emb|CAD77443.1| translation initiation factor IF-3 [Rhodopirellula baltica SH 1] gi|327537327|gb|EGF24060.1| translation initiation factor IF-3 [Rhodopirellula baltica WH47] Length = 176 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 3/134 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A LDLVE+ P VC+I+D K + T KE+++RP Sbjct: 46 LERARDAGLDLVEVAPGERPPVCRIMDYGK---FKYDKNKKKNSGSSHTKTKEIRLRPKT 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++ K++ + FL KV++SV FRGRE+ H + GR+++ + E E+ +++ +P Sbjct: 103 GDEDIRTKVRQAEKFLEHKDKVQVSVLFRGREMAHIEEGRKVMEQVIEILSEVGKVETKP 162 Query: 121 KFEGRQMIMILSSK 134 + GR+MI +++ K Sbjct: 163 QQHGRRMICMIAPK 176 >gi|319440340|ref|ZP_07989496.1| translation initiation factor IF-3 [Corynebacterium variabile DSM 44702] Length = 118 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 61/111 (54%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 CKI+D K +Y + A EARK Q+ T +KE K RP I +D + K + FL G KV Sbjct: 2 CKIMDYGKFKYEQDQKAREARKNQQQTVVKEQKFRPKISDNDYETKKGNVVRFLEKGSKV 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 K+++ FRGRE +LG LL + + E ++ K +GR M M+L Sbjct: 62 KVTIMFRGREQSRPELGFRLLERLADDVQEYGVVETRAKQDGRNMTMVLGP 112 >gi|57237211|ref|YP_178223.1| translation initiation factor IF-3 [Campylobacter jejuni RM1221] gi|86149587|ref|ZP_01067817.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151171|ref|ZP_01069386.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 260.94] gi|88597388|ref|ZP_01100623.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 84-25] gi|121612832|ref|YP_999927.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926369|ref|ZP_01810053.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157414516|ref|YP_001481772.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81116] gi|218561886|ref|YP_002343665.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|14194838|sp|Q9PIS2|IF3_CAMJE RecName: Full=Translation initiation factor IF-3 gi|73621049|sp|Q5HWW2|IF3_CAMJR RecName: Full=Translation initiation factor IF-3 gi|166198954|sp|A1VXT6|IF3_CAMJJ RecName: Full=Translation initiation factor IF-3 gi|172047020|sp|A8FK08|IF3_CAMJ8 RecName: Full=Translation initiation factor IF-3 gi|57166015|gb|AAW34794.1| translation initiation factor IF-3 [Campylobacter jejuni RM1221] gi|85839855|gb|EAQ57114.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841518|gb|EAQ58765.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 260.94] gi|87250449|gb|EAQ73407.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190449|gb|EAQ94423.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 84-25] gi|112359592|emb|CAL34376.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844761|gb|EDK21866.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157385480|gb|ABV51795.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 81116] gi|284925498|gb|ADC27850.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni IA3902] gi|307747158|gb|ADN90428.1| Translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni M1] gi|315057644|gb|ADT71973.1| Translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni S3] gi|315928138|gb|EFV07456.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930218|gb|EFV09333.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 305] gi|315932016|gb|EFV10969.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 327] Length = 172 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|297802960|ref|XP_002869364.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp. lyrata] gi|297315200|gb|EFH45623.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp. lyrata] Length = 288 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A LDLV + P V +++D K RY QK E +KK +KE+KM I Sbjct: 122 VRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKTTRMDLKELKMGYNI 181 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+++A FL+DG KVK+ V +GRE +++ ELL + GE++ + + Sbjct: 182 DQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELATEESK- 240 Query: 121 KFEGRQMIMILSS 133 F R + + L Sbjct: 241 NFRDRNLFITLVP 253 >gi|86153689|ref|ZP_01071892.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842650|gb|EAQ59862.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 172 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK +KE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDVKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|257459980|ref|ZP_05625084.1| translation initiation factor IF-3 [Campylobacter gracilis RM3268] gi|257442421|gb|EEV17560.1| translation initiation factor IF-3 [Campylobacter gracilis RM3268] Length = 173 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ +DLV I P VCK+++ K RY +K EA+KKQK +KE+K+ I Sbjct: 37 LQIAEREGVDLVLIAPDAKPPVCKVMNYSKFRYQQEKKLKEAKKKQKIIEVKEIKLSAKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER-FGEISRIDCE 119 +D+ K+K FL G VK+ V +GRE+ ++G LL+ I + F E++ D Sbjct: 97 AQNDINYKVKHAKEFLSSGKHVKLRVFLKGREMSSPEIGVNLLNKIWDEFFAEVADRDKA 156 Query: 120 PKFEGRQMIMILSSKCV 136 P EGR + M+++ K Sbjct: 157 PALEGRYVNMLITPKKA 173 >gi|291166785|gb|EFE28831.1| translation initiation factor IF-3 [Filifactor alocis ATCC 35896] Length = 193 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV+I + P VCKI+D K +Y K E++KKQK +KE+++RP I Sbjct: 57 LELATAQELDLVKISPNAVPPVCKIMDYGKYKYESAKREKESKKKQKVVVMKELRLRPAI 116 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +DL+ K K FL +G K+K+SV+FRGRE+ H+D+G +L E E +P Sbjct: 117 EENDLKTKAKMGTKFLANGDKLKVSVRFRGRELGHKDIGFIVLDKFVELVQEQGTPVGKP 176 Query: 121 KFEGRQMIMILSS 133 K EG +++++ Sbjct: 177 KMEGNSLVLMVEP 189 >gi|153951486|ref|YP_001397451.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. doylei 269.97] gi|283955646|ref|ZP_06373139.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 1336] gi|166198953|sp|A7H1S1|IF3_CAMJD RecName: Full=Translation initiation factor IF-3 gi|152938932|gb|ABS43673.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. doylei 269.97] gi|283792871|gb|EFC31647.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni 1336] Length = 172 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 72/136 (52%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVVLLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|157164257|ref|YP_001465956.1| translation initiation factor IF-3 [Campylobacter concisus 13826] Length = 165 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++ + LDLV I P VCKI+D K RY +K EA+KKQK+ IKE+K+ I Sbjct: 30 LEISNKLGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEIKEIKLSVKI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E + + D EP Sbjct: 90 AQNDINYKVKHASEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWEMIKDEADRDKEP 149 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+++ K Sbjct: 150 IIEGRYVNMLVTPKK 164 >gi|18417644|ref|NP_567851.1| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|14596121|gb|AAK68788.1| putative protein [Arabidopsis thaliana] gi|18377498|gb|AAL66915.1| putative protein [Arabidopsis thaliana] gi|332660396|gb|AEE85796.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 281 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A LDLV + P V +++D K RY QK E +KK +KE+KM I Sbjct: 115 VRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKTTRMDLKELKMGYNI 174 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+++A FL+DG KVK+ V +GRE +++ ELL + GE+ + + Sbjct: 175 DQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESK- 233 Query: 121 KFEGRQMIMILSS 133 F R + ++L Sbjct: 234 NFRDRNLFIVLVP 246 >gi|14194829|sp|Q9CEJ7|IF3_LACLA RecName: Full=Translation initiation factor IF-3 Length = 179 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ N+DLV I + P V KI+D K + +K EA+KKQ +KEV++ PVI Sbjct: 45 LMQAENLNMDLVLIS-NQEPPVAKIMDYTKFMFEQKKKQKEAKKKQAVVSVKEVRLSPVI 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +D KL+ FL G KVK+S++F+GR I HQD+GR+++ + E++ ++ Sbjct: 104 DQNDFDTKLRQAIKFLEKGDKVKVSIRFKGRMITHQDVGRQVMDKFAQATKEVAVVEQRA 163 Query: 121 KFEGRQMIMILSS 133 K +GRQM + L+ Sbjct: 164 KMDGRQMFLQLAP 176 >gi|171855144|sp|A7ZAZ8|IF3_CAMC1 RecName: Full=Translation initiation factor IF-3 gi|158604893|gb|EAT99125.3| translation initiation factor IF-3 [Campylobacter concisus 13826] Length = 172 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 76/135 (56%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++ + LDLV I P VCKI+D K RY +K EA+KKQK+ IKE+K+ I Sbjct: 37 LEISNKLGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL+DG VK V +GRE+ + G +L + E + + D EP Sbjct: 97 AQNDINYKVKHASEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWEMIKDEADRDKEP 156 Query: 121 KFEGRQMIMILSSKC 135 EGR + M+++ K Sbjct: 157 IIEGRYVNMLVTPKK 171 >gi|220931403|ref|YP_002508311.1| initiation factor 3 [Halothermothrix orenii H 168] gi|219992713|gb|ACL69316.1| initiation factor 3 [Halothermothrix orenii H 168] Length = 126 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 50/122 (40%), Positives = 77/122 (63%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 +E+ P VCKI+D K +Y K A EA+KKQ +KEV+M I+ HD VK K Sbjct: 1 MEVAPQARPPVCKIMDYGKYKYEQAKKAKEAKKKQNVMNVKEVQMGVKIEDHDFNVKAKM 60 Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 FL++ KVK+ ++FRGRE+MH+ LG +L++ + + ++ ++ +PK EGR MIM+L Sbjct: 61 AKRFLKNKHKVKVRIRFRGREVMHKQLGYDLMNRLIDEVKDLGVVESKPKMEGRNMIMVL 120 Query: 132 SS 133 + Sbjct: 121 TP 122 >gi|46204953|ref|ZP_00049248.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum magnetotacticum MS-1] Length = 181 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 59/108 (54%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y A EAR+ Q +T +KE++ R ID HD K ++ FL G KVK+ Sbjct: 1 MDFGKFKYESDMKAREARRNQANTVLKEIRFRLKIDPHDYGTKKGHVERFLAAGDKVKVM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE ++G LL + + E+ ++ PK +GR M M+L Sbjct: 61 IMFRGREQSRPEMGVRLLQRLADDVAELGFVESMPKQDGRNMTMVLGP 108 >gi|255035015|ref|YP_003085636.1| translation initiation factor IF-3 [Dyadobacter fermentans DSM 18053] gi|254947771|gb|ACT92471.1| translation initiation factor IF-3 [Dyadobacter fermentans DSM 18053] Length = 176 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 74/131 (56%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+ LDLVEI + P VCK++D K +Y +K E + K + IKE++ P D Sbjct: 39 MAKAQGLDLVEIAPTAVPPVCKVVDYSKFKYEQKKKQKEIKAKAQKVVIKEIRFGPNTDD 98 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD KLK FL++G KVK V F GR I+ ++ G LL E E +++ EPK Sbjct: 99 HDFDFKLKHATNFLKEGSKVKAYVHFVGRTIVFKERGVNLLKKFSEALSEYGKLEMEPKL 158 Query: 123 EGRQMIMILSS 133 EG++M +IL+ Sbjct: 159 EGKRMTIILAP 169 >gi|218658944|ref|ZP_03514874.1| translation initiation factor IF-3 [Rhizobium etli IE4771] Length = 111 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 61/107 (57%), Positives = 77/107 (71%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMRP ID HD +V Sbjct: 1 GLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEV 60 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 K+KA+ F +G KVK+++KFRGRE+ HQ+LG +LL +K EI+ Sbjct: 61 KMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMKLLQQVKADTTEIA 107 >gi|332295138|ref|YP_004437061.1| Translation initiation factor IF-3 [Thermodesulfobium narugense DSM 14796] gi|332178241|gb|AEE13930.1| Translation initiation factor IF-3 [Thermodesulfobium narugense DSM 14796] Length = 187 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ DLV I +P V +I+D K R+ K RK Q+ T +KEV++RP I Sbjct: 39 LRLARAKGSDLVLIAPHGSPPVARIMDYGKFRFEQSKKEKSQRKHQRQTVVKEVRLRPAI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL K KA F+ +G KVK+SV FRGRE++H + G +L++ + ++ P Sbjct: 99 GGNDLLTKAKAAQDFIDEGNKVKLSVIFRGREMIHMNQGIDLVNRFFALLKN-AVMEKLP 157 Query: 121 KFEG-RQMIMILSSKCV 136 + E + ++ I+ + Sbjct: 158 EVESEKHLVAIIGPAKI 174 >gi|315639343|ref|ZP_07894505.1| translation initiation factor IF3 [Campylobacter upsaliensis JV21] gi|315480669|gb|EFU71311.1| translation initiation factor IF3 [Campylobacter upsaliensis JV21] Length = 172 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P V KI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LGIANRLGLDLVLIAPDAKPPVAKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + + G LL I + + + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVKFRVFLKGREMSNPEAGVALLEKIWQSIEDKANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K V Sbjct: 157 LFEGRYVNMLVTPKKV 172 >gi|68535909|ref|YP_250614.1| translation initiation factor IF-3 [Corynebacterium jeikeium K411] gi|260577995|ref|ZP_05845919.1| translation initiation factor IF-3 [Corynebacterium jeikeium ATCC 43734] gi|68263508|emb|CAI36996.1| translation initiation factor IF-3 [Corynebacterium jeikeium K411] gi|258603885|gb|EEW17138.1| translation initiation factor IF-3 [Corynebacterium jeikeium ATCC 43734] Length = 114 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 58/108 (53%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EARK Q+ T +KE K RP ID HD + K + FL G KVK++ Sbjct: 1 MDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKGNVIRFLEKGSKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE +LG LL + E ++ K +GR M M+L Sbjct: 61 IMFRGREQSRPELGFRLLERLANDVEEYGVVETRAKQDGRNMTMVLGP 108 >gi|224417828|ref|ZP_03655834.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] gi|313141369|ref|ZP_07803562.1| translation initiation factor-3 [Helicobacter canadensis MIT 98-5491] gi|313130400|gb|EFR48017.1| translation initiation factor-3 [Helicobacter canadensis MIT 98-5491] Length = 171 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAESKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKRQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVAAMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+++ K Sbjct: 157 KIEGRYVNMLVTPKK 171 >gi|253827168|ref|ZP_04870053.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] gi|253510574|gb|EES89233.1| translation initiation factor IF-3 [Helicobacter canadensis MIT 98-5491] Length = 171 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAESKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKRQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVAAMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+++ K Sbjct: 157 KIEGRYVNMLVTPKK 171 >gi|57506156|ref|ZP_00372077.1| translation initiation factor IF-3 [Campylobacter upsaliensis RM3195] gi|57015551|gb|EAL52344.1| translation initiation factor IF-3 [Campylobacter upsaliensis RM3195] Length = 172 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P V KI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LGIANRLGLDLVLIAPDAKPPVAKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G VK V +GRE+ + + G LL I + + + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVKFCVFLKGREMSNPEAGVALLEKIWQSIEDKANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K V Sbjct: 157 LFEGRYVNMLVTPKKV 172 >gi|315123807|ref|YP_004065811.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017529|gb|ADT65622.1| translation initiation factor IF-3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 172 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 73/136 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV I + V P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LEIANRLGLDLVMIAADVKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL G V+ V +GRE+ + G LL I + D EP Sbjct: 97 AQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP 156 Query: 121 KFEGRQMIMILSSKCV 136 FEGR + M+++ K Sbjct: 157 NFEGRYVNMLVTPKKA 172 >gi|306842770|ref|ZP_07475412.1| translation initiation factor IF-3 [Brucella sp. BO2] gi|306287114|gb|EFM58619.1| translation initiation factor IF-3 [Brucella sp. BO2] Length = 109 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/109 (55%), Positives = 83/109 (76%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +DL KL+Y QK A EARKKQK+ IKE+KMRP ID HD +VK+KA F +G KVK++ Sbjct: 1 MDLGKLKYQNQKKAAEARKKQKTVEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 ++FRGRE+ HQ+LG +LL +KE EI++++ EPK EGRQM+M+L+ + Sbjct: 61 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAPR 109 >gi|312132189|ref|YP_003999529.1| bacterial translation initiation factor 3 (bif-3) [Leadbetterella byssophila DSM 17132] gi|311908735|gb|ADQ19176.1| bacterial translation initiation factor 3 (bIF-3) [Leadbetterella byssophila DSM 17132] Length = 185 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 81/134 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ NLDLVEI + P VC+I+D K +Y +K E + KQ T IKE++ P Sbjct: 49 LEIAKAQNLDLVEIVPNSAPPVCRIVDYSKFKYEQKKKQKELKAKQVKTVIKEIRFGPQT 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + KLK + FL++ KVK V F GR+I+ ++ G +LL E ++ + + P Sbjct: 109 DDHDYEFKLKHAENFLKENSKVKAYVHFVGRQIVFKEQGFKLLERFTEALSDLGKPEAPP 168 Query: 121 KFEGRQMIMILSSK 134 K EG+++ +I++ K Sbjct: 169 KLEGKRLNVIIAPK 182 >gi|237752911|ref|ZP_04583391.1| translation initiation factor-3 [Helicobacter winghamensis ATCC BAA-430] gi|229375178|gb|EEO25269.1| translation initiation factor-3 [Helicobacter winghamensis ATCC BAA-430] Length = 171 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LSIADSRGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL + V+ V RGRE+ G E+L+ + +++ I+ + Sbjct: 97 ASNDINYKVKHAKEFLEENKHVRFRVFLRGREVSEPQGGFEVLNKVAAMLEDVANIERDF 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+++ K Sbjct: 157 KVEGRYVNMLVTPKK 171 >gi|77412758|ref|ZP_00788981.1| translation initiation factor IF-3 [Streptococcus agalactiae CJB111] gi|77161191|gb|EAO72279.1| translation initiation factor IF-3 [Streptococcus agalactiae CJB111] Length = 168 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 75/123 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A +AN+DLV I TP V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 41 IADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDK 100 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 D + KL+ FL G KVK+S++F+GR I H+++G ++L+ E +I I+ K Sbjct: 101 GDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIXIIEQRAKM 160 Query: 123 EGR 125 +GR Sbjct: 161 DGR 163 >gi|192359216|ref|YP_001982989.1| initiation factor 3 [Cellvibrio japonicus Ueda107] gi|190685381|gb|ACE83059.1| initiation factor 3 [Cellvibrio japonicus Ueda107] Length = 143 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 56/127 (44%), Positives = 82/127 (64%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LDLVEI + P VCKI+D K + I+K A+KKQK +KE+K RP + D QVK Sbjct: 15 LDLVEIVADSDPIVCKIMDYGKHLFEIKKTKAAAKKKQKQQQVKEMKFRPGTEEADYQVK 74 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 LKA+ FL G K K+++KFRGRE+ HQ+LG E++ I++ E+ ++ K EG+Q+ Sbjct: 75 LKALIRFLEHGDKAKVTLKFRGRELAHQELGMEMMQRIEKDLTELGTVEQAAKMEGKQLT 134 Query: 129 MILSSKC 135 M+++ K Sbjct: 135 MVIAPKK 141 >gi|257462306|ref|ZP_05626721.1| protein translation initiation factor 3 [Fusobacterium sp. D12] Length = 170 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A +LDLVEI ++ P VCKI++ K RY ++ A EA+K QK T +KEVK+ I Sbjct: 37 LEIAAGQDLDLVEIAANAKPPVCKIMNFGKYRYEQERKAKEAKKNQKQTIVKEVKVTARI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D+HDL K+ I FL KVK+++ GRE MH LG L I E+F + +D Sbjct: 97 DVHDLDTKVNQIQKFLEKDNKVKVTLVLFGREKMHASLGVGTLDEIAEKFSANADVDK-- 154 Query: 121 KFEGRQMIMILSSKC 135 K+ +Q +IL+ K Sbjct: 155 KYAEKQKHIILTPKK 169 >gi|257126074|ref|YP_003164188.1| translation initiation factor IF-3 [Leptotrichia buccalis C-1013-b] gi|257050013|gb|ACV39197.1| translation initiation factor IF-3 [Leptotrichia buccalis C-1013-b] Length = 177 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + TP VCKI+D K +Y K E +KKQK+ +KE++++P I Sbjct: 43 LALATEKELDLVEISPNATPPVCKIMDYGKFKYEKTKKDKENKKKQKNVVVKEIRIKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE +H + ++L F EI+ ++ + Sbjct: 103 DEHDKETKISQIEKFIAKEHKVKVSLRLTGRERLHAESAIKVLDEFASHFEEIATVEKKY 162 Query: 121 KFEGRQMIMILSSKC 135 E Q ++LS K Sbjct: 163 GREQVQKFILLSPKK 177 >gi|255638877|gb|ACU19741.1| unknown [Glycine max] Length = 275 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 3/138 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK--STGIKEVKMRP 58 +QMA++ LDLV + P V +I+D K RY QK +KK +KE+KM Sbjct: 113 IQMAEDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAANRMDLKELKMGY 172 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 ID HD V+LKA FL+DG KVK+ V +GRE +++ L++ + GE+ + Sbjct: 173 NIDEHDYSVRLKAAQKFLKDGNKVKVIVNLKGRENEFRNMAIALITRFQNDVGELGIEET 232 Query: 119 EPKFEGRQMIMILSSKCV 136 + F R + +IL V Sbjct: 233 K-NFRDRNIFIILVPNKV 249 >gi|88607227|ref|YP_505782.1| translation initiation factor IF-3 [Anaplasma phagocytophilum HZ] gi|88598290|gb|ABD43760.1| translation initiation factor IF-3 [Anaplasma phagocytophilum HZ] Length = 172 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A A +DLVE+ S VCK+ + K +Y K KKQ+S+ +KE+K R I Sbjct: 36 LAVAARAGMDLVEVVSEGEYPVCKVYNYSKQKY--NKKKHGVTKKQRSSAVKELKFRINI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + F+ G KVK+S++F GRE+ ++++G ++L + I++ + P Sbjct: 94 EDNDYNIKLNNLKSFIEKGNKVKVSLRFVGRELQYKEVGLDILDRLVSDTEGIAKPESSP 153 Query: 121 KFEGRQMIMILSSKC 135 + +G + M+ +K Sbjct: 154 RMDGNVLSMMFGAKT 168 >gi|260889787|ref|ZP_05901050.1| translation initiation factor IF-3 [Leptotrichia hofstadii F0254] gi|260860393|gb|EEX74893.1| translation initiation factor IF-3 [Leptotrichia hofstadii F0254] Length = 163 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E LDLVEI + TP VCKI+D K +Y K E +KKQK+ IKE++++P I Sbjct: 29 LALAAEKELDLVEISPNATPPVCKIMDYGKFKYEKTKKDKENKKKQKNVVIKEIRIKPHI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE +H + ++L F E + ++ + Sbjct: 89 DEHDKETKISQIEKFIAKEHKVKVSLRLTGRERLHAESAIKVLDEFASHFEETATVEKKY 148 Query: 121 KFEGRQMIMILSSKC 135 E Q ++LS K Sbjct: 149 GKEQVQKFILLSPKK 163 >gi|331269137|ref|YP_004395629.1| translation initiation factor IF-3 [Clostridium botulinum BKT015925] gi|329125687|gb|AEB75632.1| translation initiation factor IF-3 [Clostridium botulinum BKT015925] Length = 124 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 76/124 (61%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 I ++ PSVCKI+D K Y K EA+KKQK IKE+++ P I+ HD+++K Sbjct: 1 MISANGNPSVCKIMDYGKYLYEQTKKVKEAKKKQKIVSIKEIRLSPTIEEHDIEIKANRT 60 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 FL+D KVK++V+FRGRE + G+++L + G++ I+ + K EGR MIMIL+ Sbjct: 61 KKFLQDENKVKVTVRFRGREADYSYKGKKILDLFVSKIGDVCIIEKQAKLEGRNMIMILA 120 Query: 133 SKCV 136 K Sbjct: 121 PKRA 124 >gi|255534997|ref|YP_003095368.1| Translation initiation factor 3 [Flavobacteriaceae bacterium 3519-10] gi|255341193|gb|ACU07306.1| Translation initiation factor 3 [Flavobacteriaceae bacterium 3519-10] Length = 168 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 77/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P + +ILD +K Y +K E + KQ +KE++ P Sbjct: 31 LEIAKDQELDLVVISDKAEPYISRILDYKKFLYEQKKKTKELKAKQVKVVVKEIRFGPQT 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D P Sbjct: 91 DDHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIIFKDQGEILLLKLAQELEHVGKVDQLP 150 Query: 121 KFEGRQMIMILSSKC 135 K EG++MIM++S K Sbjct: 151 KLEGKRMIMMMSPKK 165 >gi|330719255|ref|ZP_08313855.1| translation initiation factor 3 [Leuconostoc fallax KCTC 3537] Length = 143 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A++ DLV + ++ P V KI+D K+++ QK E RK QK KEV+M PVID Sbjct: 8 KIAEDMEQDLVLVQANAVPPVAKIMDWGKVKFQQQKKQKEQRKNQKIVQTKEVRMSPVID 67 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 D + KA FL G KVK++++FRGR + HQD+GRE+L + +I++++ K Sbjct: 68 SGDFDTRKKAAIKFLEKGNKVKLNLRFRGRMMTHQDIGREVLERMANELTDIAKVEQRAK 127 Query: 122 FEGRQMIMILSSK 134 +GRQM ++L+ K Sbjct: 128 MDGRQMFLVLAPK 140 >gi|242309943|ref|ZP_04809098.1| translation initiation factor-3 [Helicobacter pullorum MIT 98-5489] gi|239523240|gb|EEQ63106.1| translation initiation factor-3 [Helicobacter pullorum MIT 98-5489] Length = 171 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A++ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 LKIAEDKGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 ++D+ K+K FL++ V+ V RGRE+ +G E+L+ + +++ ID + Sbjct: 97 AINDINYKVKHAKEFLKENKHVRFRVFLRGREVSEPQVGFEVLNKVASMLEDVANIDRDY 156 Query: 121 KFEGRQMIMILSSKC 135 K EGR + M+++ K Sbjct: 157 KVEGRYVNMLVTPKK 171 >gi|332667085|ref|YP_004449873.1| translation initiation factor IF-3 [Haliscomenobacter hydrossis DSM 1100] gi|332335899|gb|AEE53000.1| Translation initiation factor IF-3 [Haliscomenobacter hydrossis DSM 1100] Length = 214 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 74/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q A+++ LDLVEI + P V +I+D K Y +K E + K T IKE++ P Sbjct: 78 LQWAEKSELDLVEISPNAVPPVVRIIDYNKFLYEKKKKEKEIKAKAAKTVIKEIRFGPNT 137 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K++ FL + KVK V FRGR I+ +D G LL + E + P Sbjct: 138 DDHDFEFKVRHAKTFLEENAKVKAYVNFRGRTIVFKDRGELLLLKFLKELEEFGSPESLP 197 Query: 121 KFEGRQMIMILSSKC 135 K EGR+MI++++ K Sbjct: 198 KLEGRRMIVMIAPKK 212 >gi|253681493|ref|ZP_04862290.1| translation initiation factor IF-3 [Clostridium botulinum D str. 1873] gi|253561205|gb|EES90657.1| translation initiation factor IF-3 [Clostridium botulinum D str. 1873] Length = 124 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 76/124 (61%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 I ++ PSVCKI+D K Y K EA+KKQK IKE+++ P I+ HD+++K Sbjct: 1 MISANGNPSVCKIMDYGKYLYEQTKKVKEAKKKQKVVSIKEIRLSPTIEEHDIEIKANRT 60 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 FL+D KVK++V+FRGRE + G+++L + G++ I+ + K EGR MIMIL+ Sbjct: 61 KKFLQDENKVKVTVRFRGREADYSYKGKKILDLFVSKIGDVCVIEKQAKLEGRNMIMILA 120 Query: 133 SKCV 136 K Sbjct: 121 PKRA 124 >gi|227494664|ref|ZP_03924980.1| possible translation initiation factor IF3 [Actinomyces coleocanis DSM 15436] gi|226831846|gb|EEH64229.1| possible translation initiation factor IF3 [Actinomyces coleocanis DSM 15436] Length = 152 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 64/108 (59%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A +AR+ Q +T +KE++ R ID HD + K ++ FL G KVK+ Sbjct: 1 MDYGKFKYEAAQKARDARRNQANTVLKEIRFRLKIDDHDYETKKGHVERFLNGGDKVKVM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE ++G LL + E E++ ++ P+ +GR M+M+L+ Sbjct: 61 IMFRGREQSRPEMGIRLLQRLAEDVSELATVESAPRQDGRNMVMVLAP 108 >gi|313205744|ref|YP_004044921.1| bacterial translation initiation factor 3 (bif-3) [Riemerella anatipestifer DSM 15868] gi|312445060|gb|ADQ81415.1| bacterial translation initiation factor 3 (bIF-3) [Riemerella anatipestifer DSM 15868] gi|315022860|gb|EFT35884.1| Translation initiation factor 3 [Riemerella anatipestifer RA-YM] Length = 165 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 76/135 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV I P + +I+D +K Y +K E + KQ +KE++ P D Sbjct: 30 ELAEEQELDLVVISDKAEPFIARIMDYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 89 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 90 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIVFKDQGEILLLKLAQDLEHVGKVDQLPK 149 Query: 122 FEGRQMIMILSSKCV 136 EG++MIM++S K Sbjct: 150 LEGKRMIMMMSPKKT 164 >gi|167957095|ref|ZP_02544169.1| translation initiation factor IF-3 [candidate division TM7 single-cell isolate TM7c] Length = 140 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ +LDLVEI P V KI+D K +Y K+ + R++ KS +K+++ I Sbjct: 7 LKKAEGMDLDLVEISPGAKPPVAKIIDWGKYQYQKMKDQQKNRRQAKSGDLKQMRFGLKI 66 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL+VKLK I FL +G KV+I V ++GRE+ H+++G EL+ + ++ + + ++ +P Sbjct: 67 GAGDLKVKLKKIRKFLENGHKVRIQVVYKGREMAHKEIGYELIDKVMDQLSDDAILEQKP 126 Query: 121 KFEGRQMIMILSSK 134 + GR + +++ SK Sbjct: 127 QMAGRNLSVVIRSK 140 >gi|269958354|ref|YP_003328141.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] gi|269848183|gb|ACZ48827.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] Length = 177 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 2/131 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+EA LDLVE+ S VCKI + K +Y K +K KS+ +KE+K R I Sbjct: 36 IATAREAELDLVEVVSDGELPVCKIFNYSKQKY--NKKKSVGPRKNKSSSLKELKFRLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + GF+ G KVK+S++F GRE+ ++++G +L + ++R + P Sbjct: 94 EDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSP 153 Query: 121 KFEGRQMIMIL 131 + +G M M+ Sbjct: 154 RMDGNVMSMVF 164 >gi|325336814|gb|ADZ13088.1| Translation initiation factor 3 (IF-3) [Riemerella anatipestifer RA-GD] Length = 163 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 76/135 (56%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E LDLV I P + +I+D +K Y +K E + KQ +KE++ P D Sbjct: 28 ELAEEQELDLVVISDKAEPFIARIMDYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 87 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 88 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIVFKDQGEILLLKLAQDLEHVGKVDQLPK 147 Query: 122 FEGRQMIMILSSKCV 136 EG++MIM++S K Sbjct: 148 LEGKRMIMMMSPKKT 162 >gi|194246830|ref|YP_002004469.1| Translation initiation factor IF3 [Candidatus Phytoplasma mali] gi|193807187|emb|CAP18628.1| Translation initiation factor IF3 [Candidatus Phytoplasma mali] Length = 185 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+E +D++ ++SS P + ++ D K RY QK E +KKQK+ +KE+++ P I Sbjct: 45 LRIAEEKEIDILLVNSSSVPMIARLTDYSKYRYNQQKKNREMKKKQKNINVKEIRIGPNI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 L+D +K+K I FL KVKI ++FRGR I+H LG E+L I IS + EP Sbjct: 105 GLNDFNIKVKNIQKFLSQDDKVKIIMRFRGRMIIHHKLGLEVLKKIITELRHISYTEMEP 164 Query: 121 KFEGRQMIMILSS 133 K G Q+I+IL Sbjct: 165 KLVGNQIIIILLP 177 >gi|88608274|ref|YP_506184.1| translation initiation factor IF-3 [Neorickettsia sennetsu str. Miyayama] gi|88600443|gb|ABD45911.1| translation initiation factor IF-3 [Neorickettsia sennetsu str. Miyayama] Length = 189 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ NLDLVE+ S+V P +CKILD K +Y +K + R+KQKS+ IKEV++R I Sbjct: 52 LQLAKSRNLDLVEVSSAVFPPICKILDYGKYKYEAKKESNLKRRKQKSSTIKEVQLRQSI 111 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRIDCE 119 DL KLK I FL++ KVK+ V+ RGRE+ +++L LL+ + E G E+ +++ E Sbjct: 112 GAGDLSTKLKKIREFLQEEDKVKVVVRLRGREMTNKNLAINLLNKVVEEVGSEVGKLEKE 171 Query: 120 PKFEGRQMIMILSSKC 135 +IL+ Sbjct: 172 IVQNNNNFFIILAPNA 187 >gi|170781627|ref|YP_001709959.1| putative translation initiation factor IF-3 [Clavibacter michiganensis subsp. sepedonicus] gi|169156195|emb|CAQ01337.1| putative translation initiation factor IF-3 [Clavibacter michiganensis subsp. sepedonicus] Length = 143 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 62/111 (55%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 KI+D K +Y + A EAR+ Q +T +KEV+ R ID HD + K K +GFL+DG KV Sbjct: 2 AKIMDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKIDKHDYETKRKRAEGFLQDGDKV 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 K + FRGRE D G LL E E ++ P +GR M+M++ Sbjct: 62 KAMILFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIGP 112 >gi|56417256|ref|YP_154330.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|222475620|ref|YP_002564037.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] gi|254995425|ref|ZP_05277615.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Mississippi] gi|255003613|ref|ZP_05278577.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Puerto Rico] gi|255004742|ref|ZP_05279543.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Virginia] gi|56388488|gb|AAV87075.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|222419758|gb|ACM49781.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] Length = 177 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 76/131 (58%), Gaps = 2/131 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+EA LDLVE+ S +CKI + K +Y K K+ +S+ +KE+K R I Sbjct: 36 IAMAREAELDLVEVVSEGEFPICKIFNYSKQKY--NKKKSGGPKRSRSSSLKELKFRLNI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + +D +KL + GF+ G KVK+S++F GRE+ ++++G +L + ++R + P Sbjct: 94 EDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSP 153 Query: 121 KFEGRQMIMIL 131 + +G M M+ Sbjct: 154 RMDGNVMSMVF 164 >gi|34557219|ref|NP_907034.1| translation initiation factor IF-3 [Wolinella succinogenes DSM 1740] gi|39931191|sp|Q7M9L9|IF3_WOLSU RecName: Full=Translation initiation factor IF-3 gi|34482935|emb|CAE09934.1| TRANSLATION INITIATION FACTOR-3 (IF3) [Wolinella succinogenes] Length = 176 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 75/134 (55%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ+ LDLV I P VCKI+D K RY +K EA+KKQK IKE+K+ I Sbjct: 38 LKIAQDLGLDLVLIAPEAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKQIEIKEIKLSVKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K FL + V+ V +GRE+ G E+L + E +I+ +D EP Sbjct: 98 AQNDVNYKVKHAKEFLEEDKHVRFRVFLKGREMSEPQSGVEVLKRVWELVEDIAIMDKEP 157 Query: 121 KFEGRQMIMILSSK 134 K EGR + M + K Sbjct: 158 KPEGRYVNMTVIPK 171 >gi|194333012|ref|YP_002014872.1| translation initiation factor IF-3 [Prosthecochloris aestuarii DSM 271] gi|226707358|sp|B4S3D1|IF3_PROA2 RecName: Full=Translation initiation factor IF-3 gi|194310830|gb|ACF45225.1| translation initiation factor IF-3 [Prosthecochloris aestuarii DSM 271] Length = 197 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ LDL+E+ + P VCK+ + KL+Y + KN + +KK K T +KE++ P D Sbjct: 45 KMAEQEGLDLIEVQPTAQPPVCKMDNYGKLQYKLDKNEKDRKKKSKPTELKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL+ +KER +S + E K Sbjct: 105 THDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELVERLKERLSNVSNPEGEAK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKRLFIYFEP 176 >gi|547710|sp|P36177|IF3C_EUGGR RecName: Full=Translation initiation factor IF-3, chloroplastic; Short=IF-3chl; Flags: Precursor gi|475786|gb|AAA20996.1| chloroplast initiation factor 3 [Euglena gracilis] Length = 538 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 76/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ ++DLV + P V K+++ KL+Y +K ++ KK K +KE+K+ I Sbjct: 339 LELAEAEDIDLVLVSIDTDPPVAKLVNYSKLKYESEKKKKDSHKKGKVKEVKELKVSHKI 398 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD V++K FL G ++K+S++F+GRE ++GR ++ + ++ + D P Sbjct: 399 GQHDYDVRVKQARKFLEGGHRIKVSMEFKGRENQFVEIGRAVMKRFQNDLADMGKADAVP 458 Query: 121 KFEGRQMIMILSS 133 K G ++I+ L+ Sbjct: 459 KKLGTRLILNLAP 471 >gi|195952840|ref|YP_002121130.1| translation initiation factor IF-3 [Hydrogenobaculum sp. Y04AAS1] gi|195932452|gb|ACG57152.1| translation initiation factor IF-3 [Hydrogenobaculum sp. Y04AAS1] Length = 171 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 77/137 (56%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYT--IQKNAVEARKKQKSTGIKEVKMRP 58 ++ A LDLVEI P VCKIL+ K +Y ++ + ++K+ + +K++ ++ Sbjct: 34 LEAANRKGLDLVEIAPQANPPVCKILNYSKFKYEIQKKEKEAKKKQKESAINVKDINLKV 93 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 +ID HDL +K+K + FL DG KV++ ++FRGRE ++ +LG +L+ I ++ ++ Sbjct: 94 MIDNHDLAIKIKQMREFLEDGDKVRVRIRFRGRENIYPELGNKLVDKIINELADVGVLEK 153 Query: 119 EPKFEGRQMIMILSSKC 135 P E + L K Sbjct: 154 PPLKENAFLTFTLLPKK 170 >gi|197294237|ref|YP_001798778.1| Translation initiation factor IF3 [Candidatus Phytoplasma australiense] gi|171853564|emb|CAM11430.1| Translation initiation factor IF3 [Candidatus Phytoplasma australiense] Length = 144 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 83/133 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++ +D+V +++ TP V +++D +K RY QK E +KK + + +KE+++ P I Sbjct: 10 LKLSEKKEIDIVVVNADSTPMVARLMDYQKHRYNQQKKHREDKKKSQVSVLKEIRISPNI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D++DL KLK + FL+ G KVKIS++FRGR I + LG +L I + ++ + Sbjct: 70 DINDLNTKLKQMQKFLKQGDKVKISMRFRGRMINNSQLGETILKKIIKDLSNLANTESPL 129 Query: 121 KFEGRQMIMILSS 133 K +G Q I +LS Sbjct: 130 KLKGNQFITVLSP 142 >gi|302762997|ref|XP_002964920.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii] gi|302809619|ref|XP_002986502.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii] gi|300145685|gb|EFJ12359.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii] gi|300167153|gb|EFJ33758.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii] Length = 430 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 11/146 (7%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ-----------KSTG 50 Q A+ LDLV I + P V K++D K +Y QK + +KK Sbjct: 128 QRAERLELDLVLISADSDPPVAKLMDYSKYKYEQQKKKRDQQKKAAGITFFYSIGSSRVE 187 Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110 IKE+KMR ID HD +V+LK FL+DG KVK+ + FRGRE +DLG +LL +E Sbjct: 188 IKELKMRYNIDTHDYEVRLKQAKNFLKDGDKVKVFMPFRGREAQFKDLGVKLLRKFEEDI 247 Query: 111 GEISRIDCEPKFEGRQMIMILSSKCV 136 GE+ ++ + EGR M M L+ + Sbjct: 248 GEMGSLENKLADEGRTMYMTLAPNKI 273 >gi|327398463|ref|YP_004339332.1| translation initiation factor IF-3 [Hippea maritima DSM 10411] gi|327181092|gb|AEA33273.1| translation initiation factor IF-3 [Hippea maritima DSM 10411] Length = 144 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 78/133 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ A LDLV + + P VC+I+D K Y QK +++K QK+ +KE+K+RP I Sbjct: 10 LRRAENAGLDLVVVSPNSNPIVCRIMDYGKYNYEKQKKQQKSKKSQKTIKVKELKLRPRI 69 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D Q KLK FL D KVK ++ RGRE+ ++L EL+ +K E+ I+ +P Sbjct: 70 ADNDYQTKLKMAKSFLEDKNKVKFNIFLRGREMDKRELVEELIERLKLDLVEVGNIEGKP 129 Query: 121 KFEGRQMIMILSS 133 ++GR++ + Sbjct: 130 DYQGRRITVSFVP 142 >gi|58699921|ref|ZP_00374512.1| initiation factor IF3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533563|gb|EAL57971.1| initiation factor IF3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 127 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 50/117 (42%), Positives = 77/117 (65%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLVEI TP VCKILD K +Y I+K A EA+KKQK+ IKE+K+ P I Sbjct: 11 LELAQGVGLDLVEIAPDSTPPVCKILDYSKQKYDIKKKASEAKKKQKTLTIKEIKLGPNI 70 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 HD + KL+ L G K+K++++FRGRE+++ ++G E L + +I++++ Sbjct: 71 GDHDYETKLRQARDLLVHGHKIKVTMRFRGRELINTEVGLEKLERLIRDTEDIAKVE 127 >gi|42560771|ref|NP_975222.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|313665133|ref|YP_004047004.1| translation initiation factor IF-3 [Mycoplasma leachii PG50] gi|61213114|sp|Q6MU22|IF3_MYCMS RecName: Full=Translation initiation factor IF-3 gi|42492267|emb|CAE76864.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|256384415|gb|ACU78985.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. capri str. GM12] gi|256385247|gb|ACU79816.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455794|gb|ADH22029.1| translation initiation factor IF-3 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301321435|gb|ADK70078.1| translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] gi|312949286|gb|ADR23882.1| translation initiation factor IF-3 [Mycoplasma leachii PG50] Length = 181 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 82/137 (59%), Gaps = 3/137 (2%) Query: 1 MQMAQEANLDL--VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 +++A+ NLDL V + T + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIARSKNLDLYQVGVQPDGTV-ITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRITV 103 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 104 NIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKMEK 163 Query: 119 EPKFEGRQMIMILSSKC 135 E K G+ + M + K Sbjct: 164 EAKLNGKFLDMYIVPKK 180 >gi|189499157|ref|YP_001958627.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides BS1] gi|226707354|sp|B3EKG8|IF3_CHLPB RecName: Full=Translation initiation factor IF-3 gi|189494598|gb|ACE03146.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides BS1] Length = 202 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 81/133 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA++ LDL+E+ + TP VCK+ + KL+Y + KN + +KK K T +KE++ P Sbjct: 44 IKMAEQEGLDLIEVQPTATPPVCKMDNYGKLQYKLDKNDRDRKKKSKPTSLKELRFHPNT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K ++ FLR G +V+ +V F GR I+++D G EL+ + ER +S + P Sbjct: 104 DKHDFDFKAAHLEEFLRKGNRVRATVVFLGRSIIYKDKGYELVERLTERLSTVSNREGSP 163 Query: 121 KFEGRQMIMILSS 133 KFEG+++ + Sbjct: 164 KFEGKKLFVYFEP 176 >gi|331703217|ref|YP_004399904.1| translation initiation factor IF 3 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801772|emb|CBW53925.1| Translation initiation factor IF 3 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 181 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 82/137 (59%), Gaps = 3/137 (2%) Query: 1 MQMAQEANLDL--VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 +++A+ NLDL V + T + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIARSKNLDLYQVGVQPDGTV-ITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRITV 103 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 104 NIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKMEK 163 Query: 119 EPKFEGRQMIMILSSKC 135 E K G+ + M + K Sbjct: 164 EAKLNGKFLDMYIVPKK 180 >gi|254796674|ref|YP_003081510.1| translation initiation factor IF-3 [Neorickettsia risticii str. Illinois] gi|254589919|gb|ACT69281.1| translation initiation factor IF-3 [Neorickettsia risticii str. Illinois] Length = 155 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ NLDLVE+ S+V P +CKILD K +Y +K + R+KQKS+ +KEV++R I Sbjct: 18 LQLAKSRNLDLVEVSSAVVPPICKILDYGKYKYEAKKESNLKRRKQKSSTVKEVQLRQSI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG-EISRIDCE 119 DL KLK I FL++ KVK+ V+ RGRE+ +++L LL+ + E G E+ +++ E Sbjct: 78 GAGDLSTKLKKIREFLQEEDKVKVVVRLRGREMTNKNLAINLLNKVVEEVGSEVGKLEKE 137 Query: 120 PKFEGRQMIMILSSKC 135 +IL+ Sbjct: 138 VVQNNNNFFIILAPNA 153 >gi|154149436|ref|YP_001406199.1| translation initiation factor IF-3 [Campylobacter hominis ATCC BAA-381] gi|166198952|sp|A7I108|IF3_CAMHC RecName: Full=Translation initiation factor IF-3 gi|153805445|gb|ABS52452.1| translation initiation factor IF-3 [Campylobacter hominis ATCC BAA-381] Length = 173 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 1/137 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A ++ LDLV I P V KI+D +K Y +K EA+KKQK IKE+K I Sbjct: 37 LEVAYQSGLDLVLIAPDAKPPVAKIMDYKKFCYQQEKKLKEAKKKQKVIEIKEIKFSAKI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER-FGEISRIDCE 119 +D+ K+K FL D VK+ V +GREI ++G LL+ I + F + + E Sbjct: 97 AQNDVNYKIKHAKEFLDDDKHVKLRVFLKGREIATPEIGVNLLNKIWDEYFEGNATKEKE 156 Query: 120 PKFEGRQMIMILSSKCV 136 P EGR + M+++ K V Sbjct: 157 PIIEGRYVSMLVTPKKV 173 >gi|227111544|ref|ZP_03825200.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327044|ref|ZP_03831068.1| translation initiation factor IF-3 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 113 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKATKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGIEVLNRVRDDLSELAVVESFPSKIEGRQMIMVLAPKK 111 >gi|83319316|ref|YP_424192.1| translation initiation factor IF-3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123753733|sp|Q2SSS1|IF3_MYCCT RecName: Full=Translation initiation factor IF-3 gi|83283202|gb|ABC01134.1| translation initiation factor IF-3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 181 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 82/137 (59%), Gaps = 3/137 (2%) Query: 1 MQMAQEANLDL--VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 +++A+ NLDL V + T + +I++ KL+Y QK + EA+K Q KE+++ Sbjct: 45 LEIAKSKNLDLYQVGVQPDGTV-ITRIVNFGKLKYEQQKKSKEAKKHQTKIENKEIRITV 103 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I HDL+ K + FL +G +VK+S+KFRGRE+++ DLG++ L+N E ++ +++ Sbjct: 104 NIGKHDLETKARKAKEFLEEGSRVKVSLKFRGREVVYLDLGQQTLNNFFELVSDVGKMEK 163 Query: 119 EPKFEGRQMIMILSSKC 135 E K G+ + M + K Sbjct: 164 EAKLNGKFLDMYIVPKK 180 >gi|283779316|ref|YP_003370071.1| translation initiation factor IF-3 [Pirellula staleyi DSM 6068] gi|283437769|gb|ADB16211.1| translation initiation factor IF-3 [Pirellula staleyi DSM 6068] Length = 200 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 3/134 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+E++LDLVE+ + P VC+I+D K + +A++ KE+++RP Sbjct: 70 LSKARESDLDLVEVAPNERPPVCRIMDFGK---YKYEKKKKAQQPTHQVKTKEIRLRPKT 126 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ K+K GFL+ KV++SV FRGRE+ H + GR+++ + E +++ P Sbjct: 127 GDHDIEFKVKQAVGFLQHKDKVQVSVIFRGRELAHIEEGRKVMDKVVSELLEFGKLEFPP 186 Query: 121 KFEGRQMIMILSSK 134 + + ++MI + K Sbjct: 187 QQQAKRMICTIMPK 200 >gi|148273192|ref|YP_001222753.1| translation initiation factor IF-3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831122|emb|CAN02074.1| translation initiation factor IF-3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 139 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 60/108 (55%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y + A EAR+ Q +T +KEV+ R ID HD + K K +GFL+DG KVK Sbjct: 1 MDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKIDKHDYETKRKRAEGFLQDGDKVKAM 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGRE D G LL E E ++ P +GR M+M++ Sbjct: 61 ILFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIGP 108 >gi|39939230|ref|NP_950996.1| translation initiation factor IF3 [Onion yellows phytoplasma OY-M] gi|39722339|dbj|BAD04829.1| translation initiation factor IF3 [Onion yellows phytoplasma OY-M] Length = 150 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 82/133 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++++++ +D+V +++ +P V ++++ +K RY QK EA+KK + +KE+++ P I Sbjct: 16 LKLSEQKEIDIVVVNADASPMVARLMNYQKHRYNQQKKLREAKKKTQIIVLKEIRLNPTI 75 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +DL K+K FL+ G KVK+S++FRGR I + LG + + + +S+I+ Sbjct: 76 DKNDLNTKIKQAQKFLKQGDKVKVSMRFRGRMINNFQLGETVFKQVMQDLKNLSQIETPL 135 Query: 121 KFEGRQMIMILSS 133 K +G Q+ +LS Sbjct: 136 KLQGNQLTAVLSP 148 >gi|171910818|ref|ZP_02926288.1| translation initiation factor IF-3 [Verrucomicrobium spinosum DSM 4136] Length = 212 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 52/131 (39%), Positives = 81/131 (61%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA+E +DLVEI +S P VCKI+D K +Y +K E+ K QK +KE+K R ID Sbjct: 1 MAKERGMDLVEISASADPPVCKIVDYGKYKYEQEKKKKESAKAQKGGKLKELKFRVGIDP 60 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD +K+ + FL +G KV++ ++F+GR++ HQ++G +L I+E + +D +PK Sbjct: 61 HDYLIKIAHGEEFLSEGNKVRVQLQFKGRQMAHQEIGFQLARRIREDLLTMGHVDQDPKM 120 Query: 123 EGRQMIMILSS 133 GR + M +S Sbjct: 121 AGRNINMQISP 131 >gi|57239616|ref|YP_180752.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58579606|ref|YP_197818.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58617660|ref|YP_196859.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Gardel] gi|75507493|sp|Q5FGP0|IF3_EHRRG RecName: Full=Translation initiation factor IF-3 gi|81672765|sp|Q5H9Z3|IF3_EHRRW RecName: Full=Translation initiation factor IF-3 gi|57161695|emb|CAH58625.1| translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] gi|58417272|emb|CAI28385.1| Translation initiation factor IF-3 [Ehrlichia ruminantium str. Gardel] gi|58418232|emb|CAI27436.1| Translation initiation factor IF-3 [Ehrlichia ruminantium str. Welgevonden] Length = 173 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 84/134 (62%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I Sbjct: 40 LSRARSVNLDLVEIVHDDEYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D VKL I GF+ G KVKIS+KF GREI+H ++G E++ + + +I++ + P Sbjct: 100 GDNDYNVKLNMIRGFIERGDKVKISLKFIGREILHPEVGMEIIERLIKDTSDIAKPENLP 159 Query: 121 KFEGRQMIMILSSK 134 K EG + MIL++K Sbjct: 160 KREGNLINMILTTK 173 >gi|187250760|ref|YP_001875242.1| translation initiation factor IF-3 [Elusimicrobium minutum Pei191] gi|254803488|sp|B2KB83|IF3_ELUMP RecName: Full=Translation initiation factor IF-3 gi|186970920|gb|ACC97905.1| Translation initiation factor IF-3 [Elusimicrobium minutum Pei191] Length = 177 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 80/134 (59%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLVEI + P VCKILD K Y K +A+KK T +KE++++ I Sbjct: 43 LYLAKQQELDLVEISPTAEPPVCKILDYSKYLYEQGKKLKDAKKKTAKTAMKELRIKSRI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+VK+K I+ FL+ V++ V F GRE H+DLG ++L ++ +R I+ ++ Sbjct: 103 ASHDLEVKIKHIEDFLKRKDMVRLVVVFHGRENQHRDLGEQMLHDVAKRLEPIANVEGGL 162 Query: 121 KFEGRQMIMILSSK 134 + G +M MI K Sbjct: 163 QVTGNRMSMIFVPK 176 >gi|328464799|gb|EGF36114.1| translational initiation factor IL3 [Lactobacillus helveticus MTCC 5463] Length = 119 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVCKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLAP 109 >gi|260103150|ref|ZP_05753387.1| initiation factor IF3 [Lactobacillus helveticus DSM 20075] gi|260083060|gb|EEW67180.1| initiation factor IF3 [Lactobacillus helveticus DSM 20075] Length = 118 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVCKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLAP 109 >gi|161507857|ref|YP_001577821.1| translational initiation factor IL3 [Lactobacillus helveticus DPC 4571] gi|160348846|gb|ABX27520.1| translational initiation factor IL3 [Lactobacillus helveticus DPC 4571] Length = 118 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + K K + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKFKHVRKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLAP 109 >gi|296102766|ref|YP_003612912.1| translation initiation factor IF-3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057225|gb|ADF61963.1| translation initiation factor IF-3 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 113 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRSLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRDDLSELAVVESFPTKIEGRQMIMVLAPKK 111 >gi|300778182|ref|ZP_07088040.1| translation initiation factor IF3 [Chryseobacterium gleum ATCC 35910] gi|300503692|gb|EFK34832.1| translation initiation factor IF3 [Chryseobacterium gleum ATCC 35910] Length = 159 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 75/134 (55%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 Q+A E LDLV I P + ++L+ +K Y +K E + KQ +KE++ P D Sbjct: 23 QIAAEQELDLVVISDKAEPFIARVLEYKKFLYEQKKKQKELKAKQVKVVVKEIRFGPQTD 82 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD + K K + FL +G K+K V F+GR I+ +D G LL + + + ++D PK Sbjct: 83 DHDYEFKKKHAEKFLEEGSKLKTYVFFKGRSIIFKDQGEILLLKLAQELEHVGKVDQLPK 142 Query: 122 FEGRQMIMILSSKC 135 EG++MIM++S K Sbjct: 143 LEGKRMIMMMSPKK 156 >gi|288549544|ref|ZP_05967374.2| translation initiation factor IF-3 [Enterobacter cancerogenus ATCC 35316] gi|288318329|gb|EFC57267.1| translation initiation factor IF-3 [Enterobacter cancerogenus ATCC 35316] Length = 113 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRSLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLTRVRDDLSELAVVESFPTKIEGRQMIMVLAPKK 111 >gi|107102274|ref|ZP_01366192.1| hypothetical protein PaerPA_01003331 [Pseudomonas aeruginosa PACS2] Length = 112 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +K A A+K QK +KE+K RP + D QVKL+ + FL +G K K+S Sbjct: 1 MDYGKHLFEKKKQAAVAKKNQKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVS 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ+LG ELL ++ E ++ PK EGRQ++M+++ K Sbjct: 61 LRFRGREMAHQELGMELLKRVEADLVEYGTVEQHPKLEGRQLMMVIAPKK 110 >gi|269114901|ref|YP_003302664.1| translation initiation factor IF-3 [Mycoplasma hominis] gi|268322526|emb|CAX37261.1| Translation initiation factor if-3 [Mycoplasma hominis ATCC 23114] Length = 229 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E N+DLV I + +ILD K +Y +K E ++KQ T +E+++ P+I Sbjct: 82 LEKASEYNMDLVLIAIENNKPIVRILDYGKFKYDKKKRQKEVKEKQAVTVNREIRLTPLI 141 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K F+ DG +VK+SVKFRGRE +LG E+L ++++I E Sbjct: 142 GDHDLKTKANKTREFILDGNRVKVSVKFRGRERARIELGEEILKKFFALIEDVAKISKEA 201 Query: 121 KF-EGRQMIMIL 131 R + M + Sbjct: 202 TLVNDRFLDMYV 213 >gi|300722779|ref|YP_003712070.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus nematophila ATCC 19061] gi|297629287|emb|CBJ89886.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus nematophila ATCC 19061] Length = 112 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSIKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G ++L+ I+E E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGIDMLNRIREDLSELATVESFPTKVEGRQMIMVLAPKK 111 >gi|227355316|ref|ZP_03839717.1| initiation factor IF3 [Proteus mirabilis ATCC 29906] gi|227164540|gb|EEI49411.1| initiation factor IF3 [Proteus mirabilis ATCC 29906] Length = 112 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KEVK RP D D QVKL+ + FL DG K K++ Sbjct: 1 MDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ I+E E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEMLNRIREDLDELASVESFPNKIEGRQMIMVLAPKK 111 >gi|270308067|ref|YP_003330125.1| translation initiation factor 3 (IF-3) [Dehalococcoides sp. VS] gi|270153959|gb|ACZ61797.1| translation initiation factor 3 (IF-3) [Dehalococcoides sp. VS] Length = 126 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 63/111 (56%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K R+ K EA++ QK + +KE+++RP I HD K ++ L G KVK++ Sbjct: 1 MDYGKYRFEQTKKDREAKRTQKISLLKEIRVRPKIGEHDFDAKARSARKQLESGDKVKLT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKCV 136 V FRGREI H +LG +LL + + +I+ I+ +P G +M + L K Sbjct: 61 VMFRGREITHAELGLKLLKKMADTLTDIATIEGQPSLLGSRMHLTLLPKAA 111 >gi|269123270|ref|YP_003305847.1| translation initiation factor IF-3 [Streptobacillus moniliformis DSM 12112] gi|268314596|gb|ACZ00970.1| translation initiation factor IF-3 [Streptobacillus moniliformis DSM 12112] Length = 177 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +AQE NLDLVE+ SS SVCKI+D K RY K E +K+QK+T IKE++++P ID Sbjct: 44 NIAQEKNLDLVEMSSSNGVSVCKIMDYGKYRYEKIKKDKENKKRQKNTVIKEIRVKPHID 103 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD++ K+ ID FL KVKIS++ GRE +H + ++L F + + ++ + Sbjct: 104 THDMETKINQIDKFLEKENKVKISLRLSGREKLHSETAIKVLDEFANVFEDKAIVEKKYG 163 Query: 122 FEGRQMIMILSSKC 135 E Q ++LS K Sbjct: 164 REQVQKFVMLSPKK 177 >gi|226941672|ref|YP_002796746.1| InfC [Laribacter hongkongensis HLHK9] gi|226716599|gb|ACO75737.1| InfC [Laribacter hongkongensis HLHK9] Length = 111 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 67/110 (60%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y K E ++KQK +KE+K RP D D VK++ + FL DG K K++ Sbjct: 1 MDYGKFKYQESKRKHEQKQKQKQIQVKEIKFRPGTDDGDYNVKIRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQD+G LL ++ E+ ++ PK EGRQM+M++ K Sbjct: 61 LRFRGREMAHQDIGLALLKRVEADLVEVGTVEQFPKLEGRQMVMMIGPKK 110 >gi|290475546|ref|YP_003468434.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus bovienii SS-2004] gi|289174867|emb|CBJ81668.1| protein chain initiation factor IF-3 (fragment) [Xenorhabdus bovienii SS-2004] Length = 112 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSVKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ I+E E++ ++ P + EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGIEMLNRIREDLSELAVVESFPSRIEGRQMIMVLAPKK 111 >gi|88658160|ref|YP_506842.1| translation initiation factor IF-3 [Ehrlichia chaffeensis str. Arkansas] gi|123763786|sp|Q2GI91|IF3_EHRCR RecName: Full=Translation initiation factor IF-3 gi|88599617|gb|ABD45086.1| translation initiation factor IF-3 [Ehrlichia chaffeensis str. Arkansas] Length = 173 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 52/134 (38%), Positives = 83/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I Sbjct: 40 LSRAKAVNLDLVEIVHDDQYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNI 99 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D VKL + GF+ G KVKIS++F GREI+H ++G E++ + +I++ + P Sbjct: 100 GDNDYNVKLNMLRGFIERGDKVKISLRFIGREILHPEVGMEIIERLIRDTADIAKPENLP 159 Query: 121 KFEGRQMIMILSSK 134 K EG + M+L++K Sbjct: 160 KKEGNIINMVLTAK 173 >gi|226330397|ref|ZP_03805915.1| hypothetical protein PROPEN_04315 [Proteus penneri ATCC 35198] gi|225201192|gb|EEG83546.1| hypothetical protein PROPEN_04315 [Proteus penneri ATCC 35198] Length = 112 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K E +KKQK +KEVK RP D D QVKL+ + FL DG K K++ Sbjct: 1 MDYGKFLYEKSKTLKEQKKKQKVIQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ I+E E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEMLNRIREDLDELAAVESFPNKIEGRQMIMVLAPKK 111 >gi|161614259|ref|YP_001588224.1| hypothetical protein SPAB_02004 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224584155|ref|YP_002637953.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|256018089|ref|ZP_05431954.1| translation initiation factor IF-3 [Shigella sp. D9] gi|256022618|ref|ZP_05436483.1| translation initiation factor IF-3 [Escherichia sp. 4_1_40B] gi|301025269|ref|ZP_07188834.1| translation initiation factor IF-3 [Escherichia coli MS 196-1] gi|306815029|ref|ZP_07449185.1| translation initiation factor IF-3 [Escherichia coli NC101] gi|307138377|ref|ZP_07497733.1| translation initiation factor IF-3 [Escherichia coli H736] gi|309788454|ref|ZP_07683058.1| translation initiation factor IF-3 [Shigella dysenteriae 1617] gi|312966920|ref|ZP_07781138.1| translation initiation factor IF-3 [Escherichia coli 2362-75] gi|312969745|ref|ZP_07783928.1| translation initiation factor IF-3 [Escherichia coli 1827-70] gi|161363623|gb|ABX67391.1| hypothetical protein SPAB_02004 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|224468682|gb|ACN46512.1| translation initiation factor IF-3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|299880134|gb|EFI88345.1| translation initiation factor IF-3 [Escherichia coli MS 196-1] gi|305851677|gb|EFM52130.1| translation initiation factor IF-3 [Escherichia coli NC101] gi|308923836|gb|EFP69339.1| translation initiation factor IF-3 [Shigella dysenteriae 1617] gi|310338030|gb|EFQ03119.1| translation initiation factor IF-3 [Escherichia coli 1827-70] gi|312288384|gb|EFR16286.1| translation initiation factor IF-3 [Escherichia coli 2362-75] gi|315618915|gb|EFU99498.1| translation initiation factor IF-3 [Escherichia coli 3431] gi|320181254|gb|EFW56173.1| Translation initiation factor 3 [Shigella boydii ATCC 9905] gi|320188405|gb|EFW63067.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. EC1212] gi|320194571|gb|EFW69202.1| Translation initiation factor 3 [Escherichia coli WV_060327] gi|320197901|gb|EFW72509.1| Translation initiation factor 3 [Escherichia coli EC4100B] gi|320641566|gb|EFX10954.1| translation initiation factor IF-3 [Escherichia coli O157:H7 str. G5101] gi|320646925|gb|EFX15758.1| translation initiation factor IF-3 [Escherichia coli O157:H- str. 493-89] gi|320652207|gb|EFX20505.1| translation initiation factor IF-3 [Escherichia coli O157:H- str. H 2687] gi|321223962|gb|EFX49025.1| Translation initiation factor 3 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323153044|gb|EFZ39313.1| translation initiation factor IF-3 [Escherichia coli EPECa14] gi|323158485|gb|EFZ44501.1| translation initiation factor IF-3 [Escherichia coli E128010] gi|323169353|gb|EFZ55029.1| translation initiation factor IF-3 [Shigella sonnei 53G] gi|323175214|gb|EFZ60828.1| translation initiation factor IF-3 [Escherichia coli LT-68] gi|323180496|gb|EFZ66041.1| translation initiation factor IF-3 [Escherichia coli 1180] gi|323186266|gb|EFZ71618.1| translation initiation factor IF-3 [Escherichia coli 1357] gi|323186900|gb|EFZ72218.1| translation initiation factor IF-3 [Escherichia coli RN587/1] gi|325497121|gb|EGC94980.1| translation initiation factor IF-3 [Escherichia fergusonii ECD227] gi|326342085|gb|EGD65866.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. 1044] gi|326343637|gb|EGD67399.1| Translation initiation factor 3 [Escherichia coli O157:H7 str. 1125] gi|327252834|gb|EGE64488.1| translation initiation factor IF-3 [Escherichia coli STEC_7v] gi|330911522|gb|EGH40032.1| translation initiation factor 3 [Escherichia coli AA86] gi|332090643|gb|EGI95738.1| translation initiation factor IF-3 [Shigella boydii 5216-82] gi|332093967|gb|EGI99020.1| translation initiation factor IF-3 [Shigella dysenteriae 155-74] gi|332343437|gb|AEE56771.1| translation initiation factor protein [Escherichia coli UMNK88] Length = 113 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL +G K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +K+ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKK 111 >gi|323466108|gb|ADX69795.1| translation initiation factor IF-3 [Lactobacillus helveticus H10] Length = 118 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 72/108 (66%), Gaps = 1/108 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFL-RDGCKVKI 84 +D K R+ QK E+RKK + +KE+++ P I+ +D + KLK + F+ ++G KV++ Sbjct: 1 MDYGKYRFEQQKKLKESRKKSNTVSVKEIRLSPTIEGNDFETKLKHVRKFISKEGAKVRV 60 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 S++FRGR I H++LG+++L + E +I+ + +PK EGR M ++L+ Sbjct: 61 SIRFRGRAITHKELGQQVLEKMAEATSDIANVISKPKMEGRSMFLMLA 108 >gi|313649262|gb|EFS13696.1| translation initiation factor IF-3 [Shigella flexneri 2a str. 2457T] gi|320173199|gb|EFW48410.1| Translation initiation factor 3 [Shigella dysenteriae CDC 74-1112] gi|332758652|gb|EGJ88971.1| translation initiation factor IF-3 [Shigella flexneri 2747-71] gi|332759228|gb|EGJ89537.1| translation initiation factor IF-3 [Shigella flexneri K-671] gi|332762543|gb|EGJ92808.1| translation initiation factor IF-3 [Shigella flexneri 4343-70] gi|332767219|gb|EGJ97414.1| protein chain initiation factor IF-3 [Shigella flexneri 2930-71] gi|333003770|gb|EGK23306.1| translation initiation factor IF-3 [Shigella flexneri VA-6] gi|333004337|gb|EGK23868.1| translation initiation factor IF-3 [Shigella flexneri K-218] gi|333018197|gb|EGK37499.1| translation initiation factor IF-3 [Shigella flexneri K-304] Length = 113 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL +G K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPSTDEGDYQVKLRSLIRFLEEGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +K+ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKK 111 >gi|315453308|ref|YP_004073578.1| translation initiation factor IF-3 [Helicobacter felis ATCC 49179] gi|315132360|emb|CBY82988.1| translation initiation factor IF-3 [Helicobacter felis ATCC 49179] Length = 164 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 71/133 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV I ++ P VC+++D K Y +K EA+KKQK IKE+K+ I Sbjct: 29 LKIARNKGLDLVLISANAKPPVCRVMDYGKYCYQAEKKLKEAKKKQKQIEIKEIKLSTQI 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ +G VK V RGRE G ++L + +I+ EP Sbjct: 89 AQNDINYKVKHAREFIEEGKHVKFKVVLRGRESHDPKAGLDVLQRVHAMMSDIADAQKEP 148 Query: 121 KFEGRQMIMILSS 133 K EGR ++ + Sbjct: 149 KTEGRFVMWLFVP 161 >gi|255627037|gb|ACU13863.1| unknown [Glycine max] Length = 243 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 3/137 (2%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEA--RKKQKSTGIKEVKMRPV 59 QMAQ++ LDLV + P V +++D K +Y QK R +KE+KM Sbjct: 81 QMAQDSELDLVIVSPDADPPVVRMMDYNKYKYEQQKKKKGQQKRSAANRMDLKELKMGYN 140 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 ID HD V+LKA FL+DG KVK+ V +GRE +++ EL+ + GE++ + + Sbjct: 141 IDQHDYSVRLKAAQKFLKDGDKVKVIVNLKGRETEFRNIAIELIKRFQSDVGELATEETK 200 Query: 120 PKFEGRQMIMILSSKCV 136 F R M +++ K Sbjct: 201 -SFRDRNMSIVMVPKKA 216 >gi|225166409|ref|ZP_03728072.1| translation initiation factor IF-3 [Opitutaceae bacterium TAV2] gi|224799347|gb|EEG17911.1| translation initiation factor IF-3 [Opitutaceae bacterium TAV2] Length = 165 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ+ NLDLVE+ ++ P VC+I+D K Y QK + K ++ IKE++ I Sbjct: 57 LALAQQFNLDLVEMAATADPPVCRIMDFGKYVYEEQKKT--SHVKATASKIKEIEFTARI 114 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 + D K+K + FL G KVK+ +KFRGRE+ +LG +++ E Sbjct: 115 EKGDFLTKVKHAEEFLDHGNKVKLRLKFRGREMARPELGFDVIKRALEELA 165 >gi|152970728|ref|YP_001335837.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955577|gb|ABR77607.1| translation initiation factor IF-3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 113 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 50/111 (45%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +K+ E++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVKDDLVELAVVESFPTKIEGRQMIMVLAPKK 111 >gi|329296184|ref|ZP_08253520.1| translation initiation factor IF-3 [Plautia stali symbiont] Length = 113 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+++ FL +G K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPSTDEGDYQVKLRSLIRFLEEGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +KE E++ ++ P K EGRQMIM+ + K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVKEDLNELAVVESFPTKIEGRQMIMVFAPKK 111 >gi|114563198|ref|YP_750711.1| initiation factor 3 [Shewanella frigidimarina NCIMB 400] gi|114334491|gb|ABI71873.1| bacterial translation initiation factor 3 (bIF-3) [Shewanella frigidimarina NCIMB 400] Length = 111 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 70/110 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + K E +KKQK +KE+K RP D +D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLFDKAKAQKEQKKKQKQVQVKEIKFRPGTDENDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ+LG +LL+ IK E + ++ PK EGRQ IM+L+ K Sbjct: 61 LRFRGREMAHQNLGMDLLNRIKADLEEYAVVESFPKMEGRQAIMVLAPKK 110 >gi|212635268|ref|YP_002311793.1| Initiation factor 3 [Shewanella piezotolerans WP3] gi|212556752|gb|ACJ29206.1| Initiation factor 3 [Shewanella piezotolerans WP3] Length = 111 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + K E +KKQK +KE+K RP D +D QVKL+ + FL DG K K++ Sbjct: 1 MDYGKFLFDKAKAQKEQKKKQKIVQVKEIKFRPGTDENDYQVKLRNLTRFLEDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG +LL+ IK I+ ++ PK EGRQ +M+L+ K Sbjct: 61 LRFRGREMAHQSLGMDLLNRIKADLEAIAVVESFPKMEGRQAVMVLAPKK 110 >gi|269119783|ref|YP_003307960.1| translation initiation factor IF-3 [Sebaldella termitidis ATCC 33386] gi|268613661|gb|ACZ08029.1| translation initiation factor IF-3 [Sebaldella termitidis ATCC 33386] Length = 177 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 79/135 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ AQEA +DLVEI + P VCKI+D K +Y K E +KKQK KE++++P I Sbjct: 43 LEKAQEAGMDLVEISPNANPPVCKIMDYGKFKYEKTKKDKENKKKQKQVVTKEMRVKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD K+ I+ FL K+KIS++ GR+ ++ D G ++L + + F + + I+ + Sbjct: 103 DTHDRDTKIAQIEKFLEKEYKIKISLRLAGRQKLYADQGIKVLDELADHFKDKAIIEKKY 162 Query: 121 KFEGRQMIMILSSKC 135 + Q ++LS K Sbjct: 163 GKDQIQKFVLLSPKK 177 >gi|91201673|emb|CAJ74733.1| strongly similar to translation initiation factor IF-3 [Candidatus Kuenenia stuttgartiensis] Length = 150 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 3/134 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ +DLVE+ P VC++++ K K + +KQ+ +KE+++RP Sbjct: 20 LGRAKSVEMDLVEVAPEADPPVCRLMNYGK---FKYKQKKKKTQKQRVVQLKELRIRPKT 76 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD+Q K++ FL + +V + + F+GRE H D+G +L+ +I++++ + Sbjct: 77 GGHDIQTKIRQARKFLENKDRVLVMMLFKGRERAHSDMGDSVLNQFAVELEDIAKVEKDR 136 Query: 121 KFEGRQMIMILSSK 134 + R+M +ILS K Sbjct: 137 ISDDRRMGIILSPK 150 >gi|193211792|ref|YP_001997745.1| translation initiation factor IF-3 [Chlorobaculum parvum NCIB 8327] gi|254803486|sp|B3QRM3|IF3_CHLP8 RecName: Full=Translation initiation factor IF-3 gi|193085269|gb|ACF10545.1| translation initiation factor IF-3 [Chlorobaculum parvum NCIB 8327] Length = 212 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 81/132 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++AQ+ NLDL+E+ + P VCK+ + KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RLAQDRNLDLIEVQPNAQPPVCKLENYGKLIYKMDKKDKDLKKKQKTTSLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + + ER ++ D EPK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELANRLTERLSTVANRDGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|295698322|ref|YP_003602977.1| translation initiation factor IF-3 [Candidatus Riesia pediculicola USDA] gi|291157453|gb|ADD79898.1| translation initiation factor IF-3 [Candidatus Riesia pediculicola USDA] Length = 183 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+ LDLVEI + P VCKI++ K Y K + +KKQK +KE+K RP Sbjct: 44 IKKAETFGLDLVEIAPNTVPPVCKIMNYGKFIYRKNKLIKKQKKKQKLFQVKEIKFRPNT 103 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE- 119 + D Q KLK + FL+ G K KI+V+FRGRE+ H+ +G +L+ I++ S + Sbjct: 104 NEGDYQTKLKKLIKFLKHGDKTKITVRFRGREVTHKKIGLNMLNRIQKDLESYSNTEMFS 163 Query: 120 PKFEGRQMIMILSSKC 135 K E RQ++MILS K Sbjct: 164 SKIENRQIVMILSPKS 179 >gi|21674936|ref|NP_663001.1| translation initiation factor IF-3 [Chlorobium tepidum TLS] gi|25008622|sp|Q8KAM9|IF3_CHLTE RecName: Full=Translation initiation factor IF-3 gi|21648165|gb|AAM73343.1| translation initiation factor IF-3 [Chlorobium tepidum TLS] Length = 213 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E +DL+E+ + P VCK+ + KL Y + K + +KKQK+T +KE++ P D Sbjct: 46 RMAEERGIDLIEVQPNAQPPVCKLENYGKLIYKMDKKDKDLKKKQKTTSLKELRFHPNTD 105 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER ++ D EPK Sbjct: 106 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGFELADRLTERLSTVANRDGEPK 165 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 166 FEGKKLFVYFEP 177 >gi|297744586|emb|CBI37848.3| unnamed protein product [Vitis vinifera] Length = 759 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 10/136 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-----KEVK 55 ++ A++ LDLVE+ P VCKI+D + +Y Q + K + + KEV+ Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVR 171 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + DL++K + + G +VK G E QDLG LL+ + ++ Sbjct: 172 FSGKTEAKDLKMKADMVKRLMDRGYRVKCMAM--GTE--DQDLG-GLLTRLSSLIEDVCF 226 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P+ E RQ +I+ Sbjct: 227 VESGPRVEKRQAYVIV 242 >gi|73667548|ref|YP_303564.1| translation initiation factor 3 [Ehrlichia canis str. Jake] gi|72394689|gb|AAZ68966.1| bacterial translation initiation factor 3 (bIF-3) [Ehrlichia canis str. Jake] Length = 159 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ NLDLVEI +CKI D K RY+ +K +++KKQK+ +KE+K + I Sbjct: 26 LSRAKAVNLDLVEIVHDDEYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNI 85 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D VKL + F+ G KVKIS++F GREI+H ++G E++ + + +I++ + Sbjct: 86 GDNDYNVKLNMLRSFIERGDKVKISLRFIGREILHPEVGMEIIERLIKDTSDIAKPENLL 145 Query: 121 KFEGRQMIMILSSK 134 K EG + M+L++K Sbjct: 146 KKEGNLINMVLTAK 159 >gi|109947951|ref|YP_665179.1| translation initiation factor IF-3 [Helicobacter acinonychis str. Sheeba] gi|109715172|emb|CAK00180.1| translation initiation factor IF-3 [Helicobacter acinonychis str. Sheeba] Length = 203 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V RGRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLRGRESQNSRAGLDVLFRVQAMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|237750836|ref|ZP_04581316.1| translation initiation factor IF3 [Helicobacter bilis ATCC 43879] gi|229373281|gb|EEO23672.1| translation initiation factor IF3 [Helicobacter bilis ATCC 43879] Length = 174 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 70/132 (53%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A LDLV I + P VCKI++ K RY ++K EA+KKQK +KE+K+ I Sbjct: 37 NLAYNEGLDLVCISPNAKPPVCKIVEYGKYRYQLEKKQKEAKKKQKQVEVKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F +G VK V RGRE+ + G E+L + +I+ D E K Sbjct: 97 QNDINYKVKHAREFFEEGKHVKFRVYLRGREMQNPAGGFEMLKRVIAMVDDIAHADKEAK 156 Query: 122 FEGRQMIMILSS 133 EG+ +++ Sbjct: 157 IEGKYASILMMP 168 >gi|157375258|ref|YP_001473858.1| translation initiation factor IF-3 [Shewanella sediminis HAW-EB3] gi|157317632|gb|ABV36730.1| translation initiation factor IF-3 [Shewanella sediminis HAW-EB3] Length = 111 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 71/110 (64%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + K E +KKQK +KEVK RP D +D QVKL+ ++ FL DG K K++ Sbjct: 1 MDYGKFLFDKAKAQKEQKKKQKQIQVKEVKFRPGTDENDYQVKLRNLNRFLDDGDKAKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG LL+ IK+ EI+ ++ PK EGRQ +M+L+ K Sbjct: 61 LRFRGREMAHQSLGMNLLNRIKDDLAEIAVVESFPKMEGRQAVMVLAPKK 110 >gi|224088324|ref|XP_002308411.1| predicted protein [Populus trichocarpa] gi|222854387|gb|EEE91934.1| predicted protein [Populus trichocarpa] Length = 208 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI---KEVKMR 57 +QMA++A LDL + P V +I+D K RY QK E +KK + +E+KM Sbjct: 11 IQMAEDAELDL--LSPDADPPVVRIMDYNKFRYEPQKKKREQQKKSAGECLFYFRELKMG 68 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 ID HD V+L+A FL+DG KVK+ V RE +++ EL+ + GE++ + Sbjct: 69 YNIDQHDYDVRLRAAQNFLKDGDKVKVIVNLNWRENEFRNIAIELIRRFQNFVGELATEE 128 Query: 118 CEPKFEGRQMIMILSSKCV 136 + F R + + L Sbjct: 129 SK-NFHDRNIFISLVPNKA 146 >gi|311087023|gb|ADP67103.1| translation initiation factor IF-3 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 112 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK IKE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIHIKEIKFRPGTDEGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G ++L+ +K E++ ++ P K EGRQMIMIL+ K Sbjct: 61 LRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFPSKIEGRQMIMILAPKK 111 >gi|308808300|ref|XP_003081460.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] gi|116059923|emb|CAL55982.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri] Length = 235 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 10/143 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR----KKQKSTGIKEVKM 56 ++MA+ LDLVE++ + TP VC+++D + RY ++ E + K QK IKE+++ Sbjct: 91 LRMARAMGLDLVEVNGTQTPPVCRMMDYERARYEQRRKMKEQKKASTKAQKRDVIKELRL 150 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD----LGRELLSNIKERFGE 112 ID HDL+ K+ FL G +V + F+ + + D G E++ N+ + Sbjct: 151 TAKIDAHDLRTKMSGAKKFLEAGNRVTFRIMFKKSDGIALDKRATRGPEIMENVMSMLED 210 Query: 113 ISRIDCEPKFEGRQ-MIMILSSK 134 + + PK G Q M +S K Sbjct: 211 VEVV-SAPKMVGLQHMTASVSPK 232 >gi|161833707|ref|YP_001597903.1| translation initiation factor 3 [Candidatus Sulcia muelleri GWSS] gi|152206197|gb|ABS30507.1| translation initiation factor 3 [Candidatus Sulcia muelleri GWSS] Length = 182 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI+S P +C+IL+ +K ++ + + KQ+ KE+++ P I Sbjct: 48 LAIAYNIGLDLVEINSKTDPPICRILEYKKFL--YEQKKKKKKYKQEKIITKELRLSPQI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD K+K + FL+ KVK ++ F+GR I+H+D G+ LL +I+ P Sbjct: 106 CEHDTLFKIKHAEKFLKSKEKVKFTIFFKGRSIIHKDKGKILLLKCANYLENFGKIEKMP 165 Query: 121 KFEGRQMIMILSSKC 135 EG++M +I++ K Sbjct: 166 IMEGKKMFIIITPKK 180 >gi|45442010|ref|NP_993549.1| translation initiation factor IF-3 [Yersinia pestis biovar Microtus str. 91001] gi|108807772|ref|YP_651688.1| translation initiation factor IF-3 [Yersinia pestis Antiqua] gi|108812049|ref|YP_647816.1| translation initiation factor IF-3 [Yersinia pestis Nepal516] gi|145598021|ref|YP_001162097.1| translation initiation factor IF-3 [Yersinia pestis Pestoides F] gi|162420706|ref|YP_001607031.1| translation initiation factor IF-3 [Yersinia pestis Angola] gi|165927507|ref|ZP_02223339.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165939537|ref|ZP_02228083.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. IP275] gi|166011845|ref|ZP_02232743.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211128|ref|ZP_02237163.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167400943|ref|ZP_02306449.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422150|ref|ZP_02313903.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424947|ref|ZP_02316700.1| translation initiation factor IF-3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024060|ref|YP_001720565.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis YPIII] gi|186895721|ref|YP_001872833.1| translation initiation factor IF-3 [Yersinia pseudotuberculosis PB1/+] gi|229837959|ref|ZP_04458118.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895120|ref|ZP_04510296.1| Translation initiation factor 3 [Yersinia pestis Pestoides A] gi|229898520|ref|ZP_04513665.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229902361|ref|ZP_04517481.1| Translation initiation factor 3 [Yersinia pestis Nepal516] gi|238753685|ref|ZP_04615047.1| Translation initiation factor IF-3 [Yersinia ruckeri ATCC 29473] gi|270490459|ref|ZP_06207533.1| translation initiation factor IF-3 [Yersinia pestis KIM D27] gi|294503567|ref|YP_003567629.1| protein chain initiation factor IF-3 [Yersinia pestis Z176003] gi|21958723|gb|AAM85471.1|AE013793_7 protein chain initiation factor IF-3 [Yersinia pestis KIM 10] gi|45436873|gb|AAS62426.1| protein chain initiation factor IF-3 [Yersinia pestis biovar Microtus str. 91001] gi|108775697|gb|ABG18216.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Nepal516] gi|108779685|gb|ABG13743.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Antiqua] gi|145209717|gb|ABP39124.1| bacterial translation initiation factor 3 (bIF-3) [Yersinia pestis Pestoides F] gi|162353521|gb|ABX87469.1| translation initiation factor IF-3 [Yersinia pestis Angola] gi|165912586|gb|EDR31217.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. IP275] gi|165920562|gb|EDR37839.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165989310|gb|EDR41611.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166208308|gb|EDR52788.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166958962|gb|EDR55983.1| translation initiation factor IF-3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049796|gb|EDR61204.1| translation initiation factor IF-3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056134|gb|EDR65912.1| translation initiation factor IF-3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750594|gb|ACA68112.1| initiation factor 3 [Yersinia pseudotuberculosis YPIII] gi|186698747|gb|ACC89376.1| initiation factor 3 [Yersinia pseudotuberculosis PB1/+] gi|229680696|gb|EEO76792.1| Translation initiation factor 3 [Yersinia pestis Nepal516] gi|229688068|gb|EEO80139.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. India 195] gi|229694325|gb|EEO84372.1| Translation initiation factor 3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701882|gb|EEO89905.1| Translation initiation factor 3 [Yersinia pestis Pestoides A] gi|238708237|gb|EEQ00593.1| Translation initiation factor IF-3 [Yersinia ruckeri ATCC 29473] gi|262361609|gb|ACY58330.1| protein chain initiation factor IF-3 [Yersinia pestis D106004] gi|262365650|gb|ACY62207.1| protein chain initiation factor IF-3 [Yersinia pestis D182038] gi|270338963|gb|EFA49740.1| translation initiation factor IF-3 [Yersinia pestis KIM D27] gi|294354026|gb|ADE64367.1| protein chain initiation factor IF-3 [Yersinia pestis Z176003] gi|320015089|gb|ADV98660.1| Translation initiation factor 3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 116 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERF---GEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ +++ ++ P + EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRKDLCEDSDLAVVESFPTRIEGRQMIMVLAPKK 114 >gi|292488130|ref|YP_003531007.1| translation initiation factor IF-3 [Erwinia amylovora CFBP1430] gi|291553554|emb|CBA20599.1| Translation initiation factor IF-3 [Erwinia amylovora CFBP1430] gi|312172262|emb|CBX80519.1| Translation initiation factor IF-3 [Erwinia amylovora ATCC BAA-2158] Length = 116 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K++ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFG---EISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ +++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRKDLCEDIDLAVVESFPTKIEGRQMIMVLAPKK 114 >gi|255024280|ref|ZP_05296266.1| translation initiation factor IF-3 [Listeria monocytogenes FSL J1-208] Length = 99 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 58/95 (61%) Query: 39 AVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDL 98 EARK QK +KEV++ P ID HD KL+ FL G KVK S++F+GR I H+++ Sbjct: 1 DKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEI 60 Query: 99 GRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 G+++L + ++ I+ PK +GR M ++L+ Sbjct: 61 GQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 95 >gi|308183918|ref|YP_003928051.1| translation initiation factor IF-3 [Helicobacter pylori SJM180] gi|308059838|gb|ADO01734.1| translation initiation factor IF-3 [Helicobacter pylori SJM180] Length = 203 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|210134325|ref|YP_002300764.1| translation initiation factor IF-3 [Helicobacter pylori P12] gi|210132293|gb|ACJ07284.1| translation initiation factor If-3 [Helicobacter pylori P12] Length = 203 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + I K Sbjct: 156 KTEGRFVSWIFVPKA 170 >gi|110004466|emb|CAK98803.1| putative translation initiation factor if-3 protein [Spiroplasma citri] Length = 176 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A+E LDL+ + ++ P V K++D K +Y +K E +K Q T KE+++R I Sbjct: 42 IRFAEEKGLDLLLVSAASNPPVAKLVDYGKYKYEQKKKEKENKKNQHITENKEMRLRTGI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K K + FL DG +VKIS+KFRGRE+ + G+E L ++++I+ EP Sbjct: 102 GEHDLEFKAKKVREFLTDGNRVKISLKFRGREVARPEYGKETLDKFFSYIEDLAKIEKEP 161 Query: 121 KFEGRQMIMILSSKC 135 + G + M + K Sbjct: 162 QLNGLFLDMYVVPKK 176 >gi|217031885|ref|ZP_03437387.1| hypothetical protein HPB128_3g4 [Helicobacter pylori B128] gi|216946354|gb|EEC24959.1| hypothetical protein HPB128_3g4 [Helicobacter pylori B128] Length = 180 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317010402|gb|ADU84149.1| translation initiation factor IF-3 [Helicobacter pylori SouthAfrica7] Length = 203 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|205356548|ref|ZP_03223311.1| translation initiation factor IF3 [Campylobacter jejuni subsp. jejuni CG8421] gi|205345553|gb|EDZ32193.1| translation initiation factor IF3 [Campylobacter jejuni subsp. jejuni CG8421] Length = 124 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 64/124 (51%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 I + P VCKI+D K RY +K EA+KKQK IKE+K+ I +D+ K+K Sbjct: 1 MIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDINYKVKHA 60 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 FL G V+ V +GRE+ + G LL I + D EP FEGR + M+++ Sbjct: 61 LEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEGRYVNMLVT 120 Query: 133 SKCV 136 K Sbjct: 121 PKKA 124 >gi|317013545|gb|ADU80981.1| translation initiation factor IF-3 [Helicobacter pylori Gambia94/24] Length = 203 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317011968|gb|ADU82576.1| translation initiation factor IF-3 [Helicobacter pylori Lithuania75] Length = 203 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|157370385|ref|YP_001478374.1| translation initiation factor IF-3 [Serratia proteamaculans 568] gi|270261558|ref|ZP_06189831.1| translation initiation factor IF-3 [Serratia odorifera 4Rx13] gi|157322149|gb|ABV41246.1| initiation factor 3 [Serratia proteamaculans 568] gi|270045042|gb|EFA18133.1| translation initiation factor IF-3 [Serratia odorifera 4Rx13] Length = 116 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERF---GEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ +++ ++ P + EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRKDLCEDSDLAIVESFPTRIEGRQMIMVLAPKK 114 >gi|308061414|gb|ADO03302.1| translation initiation factor IF-3 [Helicobacter pylori Cuz20] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|308182297|ref|YP_003926424.1| translation initiation factor IF-3 [Helicobacter pylori PeCan4] gi|308064482|gb|ADO06374.1| translation initiation factor IF-3 [Helicobacter pylori PeCan4] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|261837576|gb|ACX97342.1| translation initiation factor IF-3 [Helicobacter pylori 51] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|317008796|gb|ADU79376.1| translation initiation factor IF-3 [Helicobacter pylori India7] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|224373364|ref|YP_002607736.1| translation initiation factor IF-3 [Nautilia profundicola AmH] gi|254803490|sp|B9L5U8|IF3_NAUPA RecName: Full=Translation initiation factor IF-3 gi|223589072|gb|ACM92808.1| translation initiation factor IF-3 [Nautilia profundicola AmH] Length = 178 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 73/133 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV + + P V K++D K +Y +K EA+KKQ +KE+K I Sbjct: 39 LEIAYNKGLDLVLVAPNANPPVAKVMDYGKYKYEQEKKKKEAKKKQVKIEVKEIKFTSKI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K I FL G VK+ V RGRE+ + G E+++ + + +++ EP Sbjct: 99 QENDINYKVKHIKEFLEKGKHVKLRVFLRGRELATPEKGFEVINKVWDMISDVAEKQNEP 158 Query: 121 KFEGRQMIMILSS 133 K EG + ++++ Sbjct: 159 KLEGNYINLLVTP 171 >gi|108562548|ref|YP_626864.1| translation initiation factor IF-3 [Helicobacter pylori HPAG1] gi|207092168|ref|ZP_03239955.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_AG0C1] gi|107836321|gb|ABF84190.1| translation initiation factor IF-3 [Helicobacter pylori HPAG1] gi|261838990|gb|ACX98755.1| translation initiation factor IF-3 [Helicobacter pylori 52] gi|317179510|dbj|BAJ57298.1| translation initiation factor IF-3 [Helicobacter pylori F30] gi|317181404|dbj|BAJ59188.1| translation initiation factor IF-3 [Helicobacter pylori F57] Length = 203 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|293396369|ref|ZP_06640647.1| translation initiation factor IF3 [Serratia odorifera DSM 4582] gi|291421158|gb|EFE94409.1| translation initiation factor IF3 [Serratia odorifera DSM 4582] Length = 116 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERF---GEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +++ +++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRKDLCEDSDLAVVESFPTKIEGRQMIMVLAPKK 114 >gi|254778841|ref|YP_003056946.1| translation initiation factor IF-3 [Helicobacter pylori B38] gi|254000752|emb|CAX28676.1| Translation initiation factor IF-3 [Helicobacter pylori B38] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|307636814|gb|ADN79264.1| transcription initiation factor 3 [Helicobacter pylori 908] gi|325995403|gb|ADZ50808.1| Translation initiation factor 3 [Helicobacter pylori 2018] gi|325997001|gb|ADZ49209.1| Transcription initiation factor 3 [Helicobacter pylori 2017] Length = 197 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 30 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 90 AQNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMEDLANPEKEP 149 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 150 KTEGRFVSWMFVPKA 164 >gi|298736934|ref|YP_003729464.1| translation initiation factor IF-3 [Helicobacter pylori B8] gi|298356128|emb|CBI67000.1| translation initiation factor IF-3 [Helicobacter pylori B8] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|238749481|ref|ZP_04610986.1| Translation initiation factor IF-3 [Yersinia rohdei ATCC 43380] gi|238757781|ref|ZP_04618964.1| Translation initiation factor IF-3 [Yersinia aldovae ATCC 35236] gi|238765297|ref|ZP_04626224.1| Translation initiation factor IF-3 [Yersinia kristensenii ATCC 33638] gi|238783383|ref|ZP_04627406.1| Translation initiation factor IF-3 [Yersinia bercovieri ATCC 43970] gi|238787090|ref|ZP_04630890.1| Translation initiation factor IF-3 [Yersinia frederiksenii ATCC 33641] gi|238791700|ref|ZP_04635337.1| Translation initiation factor IF-3 [Yersinia intermedia ATCC 29909] gi|238797379|ref|ZP_04640879.1| Translation initiation factor IF-3 [Yersinia mollaretii ATCC 43969] gi|238696470|gb|EEP89260.1| Translation initiation factor IF-3 [Yersinia kristensenii ATCC 33638] gi|238704024|gb|EEP96558.1| Translation initiation factor IF-3 [Yersinia aldovae ATCC 35236] gi|238712136|gb|EEQ04349.1| Translation initiation factor IF-3 [Yersinia rohdei ATCC 43380] gi|238715628|gb|EEQ07617.1| Translation initiation factor IF-3 [Yersinia bercovieri ATCC 43970] gi|238718810|gb|EEQ10626.1| Translation initiation factor IF-3 [Yersinia mollaretii ATCC 43969] gi|238724878|gb|EEQ16518.1| Translation initiation factor IF-3 [Yersinia frederiksenii ATCC 33641] gi|238728804|gb|EEQ20321.1| Translation initiation factor IF-3 [Yersinia intermedia ATCC 29909] gi|318605897|emb|CBY27395.1| unnamed protein product [Yersinia enterocolitica subsp. palearctica Y11] gi|330861020|emb|CBX71292.1| translation initiation factor IF-3 [Yersinia enterocolitica W22703] Length = 116 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERF---GEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ +K+ +++ ++ P + EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVKKDLTEDSDLAVVESFPTRIEGRQMIMVLAPKK 114 >gi|15611184|ref|NP_222835.1| translation initiation factor IF-3 [Helicobacter pylori J99] gi|7387798|sp|Q9ZMV2|IF3_HELPJ RecName: Full=Translation initiation factor IF-3 gi|4154622|gb|AAD05693.1| TRANSLATION INITIATION FACTOR IF-3 [Helicobacter pylori J99] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|315586097|gb|ADU40478.1| translation initiation factor IF3 [Helicobacter pylori 35A] gi|317176943|dbj|BAJ54732.1| translation initiation factor IF-3 [Helicobacter pylori F16] gi|317179929|dbj|BAJ57715.1| translation initiation factor IF-3 [Helicobacter pylori F32] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|297379345|gb|ADI34232.1| translation initiation factor IF-3 [Helicobacter pylori v225d] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|188526927|ref|YP_001909614.1| translation initiation factor IF-3 [Helicobacter pylori Shi470] gi|188143167|gb|ACD47584.1| translation initiation factor IF-3 [Helicobacter pylori Shi470] Length = 203 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|448402|prf||1917188C initiation factor 3 Length = 111 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Query: 27 DLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 D K Y K++ E +KKQK +KE+K RP D D QVKL+ + FL DG KVKI++ Sbjct: 1 DYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPSTDELDYQVKLRNLIRFLEDGDKVKITL 60 Query: 87 KFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 +FRGRE+ HQ +G ++L+ +K E++ I+ P K EGRQMIM+L+ K Sbjct: 61 RFRGREMAHQKIGIDVLNRVKNDLIELAIIESFPSKIEGRQMIMVLAPKK 110 >gi|189485294|ref|YP_001956235.1| translation initiation factor IF-3 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254803500|sp|B1GZU2|IF3_UNCTG RecName: Full=Translation initiation factor IF-3 gi|170287253|dbj|BAG13774.1| translation initiation factor IF-3 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 182 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 82/134 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + AQ +LDLVEI P VC+I++ K +Y ++K EARKKQK IKEV++RP I Sbjct: 45 LAKAQAKDLDLVEISPQANPPVCRIINFSKFKYEMEKKEKEARKKQKIFHIKEVRIRPRI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+VK+K F+ G KV+++ F GRE+ H+DLG +++ IKE +I+ + + Sbjct: 105 SDHDLEVKIKHAREFIDGGDKVQLTALFSGREMQHKDLGIKIMERIKESLADIACPERKV 164 Query: 121 KFEGRQMIMILSSK 134 G ++ + L K Sbjct: 165 YSMGMRVFLTLVPK 178 >gi|15644754|ref|NP_206924.1| translation initiation factor IF-3 [Helicobacter pylori 26695] gi|2497283|sp|P55973|IF3_HELPY RecName: Full=Translation initiation factor IF-3 gi|2313208|gb|AAD07193.1| translation initiation factor IF-3 (infC) [Helicobacter pylori 26695] Length = 203 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LHIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|149195434|ref|ZP_01872517.1| translation initiation factor IF-3 [Caminibacter mediatlanticus TB-2] gi|149134439|gb|EDM22932.1| translation initiation factor IF-3 [Caminibacter mediatlanticus TB-2] Length = 166 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A LDLV + + P V K++D K +Y ++ EA+KKQ +KE+K I Sbjct: 38 LEIAYNKGLDLVLVAPNANPPVAKVMDYGKYKYEQERKKKEAKKKQVKIEVKEIKFTSKI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 +D+ K+K FL G VK+ V RGRE+ + G E+++ + + ++ + Sbjct: 98 QQNDIDYKVKHAREFLEKGKHVKLRVFLRGRELATPEKGFEVINKVWDMLKDVEK 152 >gi|320539026|ref|ZP_08038701.1| protein chain initiation factor IF-3 [Serratia symbiotica str. Tucson] gi|320030959|gb|EFW12963.1| protein chain initiation factor IF-3 [Serratia symbiotica str. Tucson] Length = 116 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 4/114 (3%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y K+ E +KKQK +KE+K RP D D QVKL+ + FL DG K KI+ Sbjct: 1 MDYGKFLYEKSKSTKEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRNLVRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERF---GEISRIDCEP-KFEGRQMIMILSSKC 135 ++FRGRE+ HQ +G E+L+ ++ +++ ++ P K EGRQMIM+L+ K Sbjct: 61 LRFRGREMAHQQIGMEVLNRVRRDLCEEADLAVVESFPTKIEGRQMIMVLAPKK 114 >gi|160902176|ref|YP_001567757.1| translation initiation factor IF-3 [Petrotoga mobilis SJ95] gi|160359820|gb|ABX31434.1| translation initiation factor IF-3 [Petrotoga mobilis SJ95] Length = 175 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 77/133 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV + P V +++D K Y +K A+KKQK +KE+K R I Sbjct: 37 LKLAEQSGVDLVLVAPEAKPPVARMMDYGKYIYEKEKKEKLAKKKQKKQVLKEMKFRLRI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD KLK I FL DG KV+ + F GR+I+ ++ G+E+L + + +I+++ Sbjct: 97 DDHDFNTKLKKIREFLEDGYKVRAVIMFLGRDILFKEKGKEILDKVVSQTSDIAKVSRGA 156 Query: 121 KFEGRQMIMILSS 133 K G+ M +IL Sbjct: 157 KLLGKDMDIILEP 169 >gi|262037768|ref|ZP_06011210.1| translation initiation factor IF-3 [Leptotrichia goodfellowii F0264] gi|261748240|gb|EEY35637.1| translation initiation factor IF-3 [Leptotrichia goodfellowii F0264] Length = 177 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 78/135 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A E L+LVEI + TP VCKI+D K +Y K E +KKQK+ IKE++++P I Sbjct: 43 IALANEKGLELVEISPNATPPVCKIMDYGKFKYEKTKKEKENKKKQKNVVIKELRIKPHI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD + K+ I+ F+ KVK+S++ GRE MH + ++L F E + ++ + Sbjct: 103 DEHDKETKISQIEKFIAKEYKVKVSLRLSGREKMHAESAIKVLDEFASHFEETATVEKKY 162 Query: 121 KFEGRQMIMILSSKC 135 E Q ++LS K Sbjct: 163 GKEQLQKFIMLSPKK 177 >gi|208434082|ref|YP_002265748.1| translation initiation factor IF-3 [Helicobacter pylori G27] gi|208432011|gb|ACI26882.1| translation initiation factor IF-3 [Helicobacter pylori G27] Length = 203 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 71/134 (52%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 NIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EPK Sbjct: 97 QNDINYKVKHAREFIEANKHVKFKVVLKGRESQNSKAGLDVLLRVQTMMQDLANPEKEPK 156 Query: 122 FEGRQMIMILSSKC 135 EGR + + K Sbjct: 157 TEGRFVSWMFVPKA 170 >gi|163756232|ref|ZP_02163347.1| translation initiation factor IF-3 [Kordia algicida OT-1] gi|161323844|gb|EDP95178.1| translation initiation factor IF-3 [Kordia algicida OT-1] Length = 111 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 61/110 (55%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D +K Y +K + K +KE++ P D HD + K K FL+DG K+K Sbjct: 1 MDYKKFLYEQKKREKSLKAKASKVTVKEIRFGPQTDEHDYEFKKKHAIKFLKDGAKLKAY 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 V F+GR I+++D G+ LL + + E +++ PK EG++MIM ++ K Sbjct: 61 VFFKGRSIIYKDQGQILLLKLAQELEEYGKVEQMPKLEGKRMIMFIAPKK 110 >gi|293977817|ref|YP_003543247.1| bacterial translation initiation factor 3 [Candidatus Sulcia muelleri DMIN] gi|292667748|gb|ADE35383.1| bacterial translation initiation factor 3 (bIF-3) [Candidatus Sulcia muelleri DMIN] Length = 182 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI++ P +C+IL+ +K ++ + + KQ+ KE+++ P I Sbjct: 48 LAIAYNIGLDLVEINTKTDPPICRILEYKKFL--YEQKKKKKKYKQEKIITKELRLSPQI 105 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD K+K + FL+ KVK ++ F+GR I+H+D G+ LL +I+ P Sbjct: 106 CEHDTLFKIKHAEKFLKYKEKVKFTIFFKGRSIIHKDKGKILLLKCANYLENFGKIEKMP 165 Query: 121 KFEGRQMIMILSSKC 135 EG++M +I++ K Sbjct: 166 IMEGKKMFIIITPKK 180 >gi|119510605|ref|ZP_01629735.1| translation initiation factor 3 [Nodularia spumigena CCY9414] gi|119464766|gb|EAW45673.1| translation initiation factor 3 [Nodularia spumigena CCY9414] Length = 144 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + S V KI++ KL+Y +K ++ + +KEV+ RP + Sbjct: 18 LELAESLELDLVVVSESKDTPVAKIINYGKLQYQKKKRQTQSARP----TVKEVRFRPNV 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D ++++ +L G VK +++ RGRE H++ E+L I E+ ++ Sbjct: 74 GIADYNLRIEQATQWLSKGDSVKFAIRLRGREHQHREQAGEMLDRIVAALSEVGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I+ + Sbjct: 132 -LDKRSLIVQVIP 143 >gi|225428072|ref|XP_002277979.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 687 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 23/148 (15%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG---------- 50 ++ A++ LDLVE+ P VCKI+D + +Y Q + R K K+ Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKD-RTKSKAIEAYALALLKSE 170 Query: 51 -------IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELL 103 KEV+ + DL++K + + G +VK G E QDLG LL Sbjct: 171 LTLRKGDCKEVRFSGKTEAKDLKMKADMVKRLMDRGYRVKCMAM--GTE--DQDLG-GLL 225 Query: 104 SNIKERFGEISRIDCEPKFEGRQMIMIL 131 + + ++ ++ P+ E RQ +I+ Sbjct: 226 TRLSSLIEDVCFVESGPRVEKRQAYVIV 253 >gi|308062984|gb|ADO04871.1| translation initiation factor IF-3 [Helicobacter pylori Sat464] gi|332672964|gb|AEE69781.1| translation initiation factor IF3 [Helicobacter pylori 83] Length = 203 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 71/134 (52%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 37 NIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIA 96 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EPK Sbjct: 97 QNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPK 156 Query: 122 FEGRQMIMILSSKC 135 EGR + + K Sbjct: 157 TEGRFVSWMFVPKA 170 >gi|217034631|ref|ZP_03440038.1| hypothetical protein HP9810_881g24 [Helicobacter pylori 98-10] gi|216942926|gb|EEC22413.1| hypothetical protein HP9810_881g24 [Helicobacter pylori 98-10] Length = 203 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +AQ LDLV I +S P VCK++D K RY +K EA+KKQK IKE+K+ I Sbjct: 36 LNIAQNLGLDLVLISASTKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +D+ K+K F+ VK V +GRE + G ++L ++ +++ + EP Sbjct: 96 AQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP 155 Query: 121 KFEGRQMIMILSSKC 135 K EGR + + K Sbjct: 156 KTEGRFVSWMFVPKA 170 >gi|157833956|pdb|1TIG|A Chain A, Translation Initiation Factor 3 C-Terminal Domain Length = 94 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 57/90 (63%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 KQK +KEV++ P I+ HD KL+ FL G KVK +++F+GR I H+++G+ +L Sbjct: 1 KQKVINVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLD 60 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMILSSK 134 + E +I+ ++ PK +GR M ++L+ K Sbjct: 61 RLSEACADIAVVETAPKMDGRNMFLVLAPK 90 >gi|326487826|dbj|BAJ89752.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 528 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-----GIKEVK 55 +QMA LDLVE+D P VCKI+D K +Y + K + + IKEV+ Sbjct: 94 LQMAARMGLDLVEVDRKSNPPVCKIMDFHKEKYNKDVQQKQRLKTKSAIALRGGDIKEVR 153 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + ++ D++VK AI + G KVK G E +DLG LS + ++ Sbjct: 154 FKAKTEIKDMKVKADAITRLMERGYKVKCMAMPAGNEA--EDLGGP-LSRLLGLIQDVCT 210 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 211 VESGPHLDSKHAYVIV 226 >gi|240949010|ref|ZP_04753364.1| translation initiation factor IF-3 [Actinobacillus minor NM305] gi|240296597|gb|EER47215.1| translation initiation factor IF-3 [Actinobacillus minor NM305] Length = 112 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 48/111 (43%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 ++ K Y +K A E +KKQK +KE+K RP D D QVKL+++ FL DG K KI+ Sbjct: 1 MNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 V+FRGRE+ HQ++G ++L +K +I+ ++ P K EGRQ++M+L+ K Sbjct: 61 VRFRGREMAHQEIGMDVLERVKNDLADIAVVESAPGKLEGRQVVMVLAPKK 111 >gi|186687118|ref|YP_001870261.1| initiation factor 3 [Nostoc punctiforme PCC 73102] gi|186469421|gb|ACC85220.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LQLAESLELDLVLVSEGKEAPVAKILNYGKLQYQKKKRQAQSARP----VVKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D +++++ G+L G VK +V+ RGRE ++D ELL + + ++ Sbjct: 74 GVADYKLRIEQAVGWLSKGDSVKFAVRLRGREHQYRDQAGELLDRVVSDLNSVGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I ++ Sbjct: 132 -LDKRSLIALIIP 143 >gi|257465354|ref|ZP_05629725.1| translation initiation factor IF-3 [Actinobacillus minor 202] gi|257451014|gb|EEV25057.1| translation initiation factor IF-3 [Actinobacillus minor 202] Length = 112 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 ++ K Y +K A E +KKQK +KE+K RP D D QVKL+++ FL DG K KI+ Sbjct: 1 MNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 V+FRGRE+ HQ++G ++L +K EI+ ++ P K EGRQ++M+L+ K Sbjct: 61 VRFRGREMAHQEIGMDVLERVKNDLAEIAVVESAPGKLEGRQVVMVLAPKK 111 >gi|78186012|ref|YP_374055.1| translation initiation factor IF-3 [Chlorobium luteolum DSM 273] gi|123771143|sp|Q3B6L9|IF3_PELLD RecName: Full=Translation initiation factor IF-3 gi|78165914|gb|ABB23012.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium luteolum DSM 273] Length = 206 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ N DL+E+ + P VCK +L KL Y + + + +KKQK+T +KE++ P D Sbjct: 45 RMAEDRNTDLIEVQPNAEPPVCKFDNLGKLLYKMAQRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER + + EPK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELADRLTERLSVVGNREGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|221632833|ref|YP_002522055.1| translation initiation factor IF-3 [Thermomicrobium roseum DSM 5159] gi|221156134|gb|ACM05261.1| translation initiation factor IF-3 [Thermomicrobium roseum DSM 5159] Length = 127 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 72/111 (64%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K RY + E+RK+QK+ +KE+++RP ID HDL+ K++ I FL DG KVK++ Sbjct: 1 MDYGKYRYEESRRERESRKRQKTIEVKEIRLRPRIDTHDLETKVRQIQQFLTDGAKVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKCV 136 V FRGREI++QDLG +L + + G + ++ P EGR ++M L+ V Sbjct: 61 VLFRGREIVYQDLGERVLQRVIDLLGPRAVVEQPPHAEGRTLVMFLAPGHV 111 >gi|330813583|ref|YP_004357822.1| translation initiation factor 3 [Candidatus Pelagibacter sp. IMCC9063] gi|327486678|gb|AEA81083.1| translation initiation factor 3 [Candidatus Pelagibacter sp. IMCC9063] Length = 109 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 66/106 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y +QK A ARKKQK +KE+K+RPV D+HD K+K FL +G KVK + Sbjct: 1 MDSGKYKYELQKKANLARKKQKVILLKEIKLRPVTDVHDYDFKIKNAVKFLTNGDKVKFT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 +KF+GRE+ +L+ I E E+ +++ K EGRQM +I+ Sbjct: 61 IKFKGREMEFIKAAYDLVRRIIEDVKEVGKVEQSAKMEGRQMTLII 106 >gi|225850054|ref|YP_002730288.1| translation initiation factor IF-3 [Persephonella marina EX-H1] gi|225645181|gb|ACO03367.1| translation initiation factor IF-3 [Persephonella marina EX-H1] Length = 116 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 2/114 (1%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQ--KSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 CKI+D K ++ +K EA+KKQ K +KE+K R I+ HD + K+K I F+ DG Sbjct: 2 CKIMDYGKYKFEQKKKEKEAKKKQRAKMQNVKEIKFRVKIEDHDYRTKVKHIREFIEDGD 61 Query: 81 KVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSK 134 KVK+ + FRGRE +H ++G L I E +I++++ PK EGR MI L K Sbjct: 62 KVKVWIWFRGRENVHPEIGERLAHRIIEDLSDIAKVEKPPKKEGRNMIFTLVPK 115 >gi|115443613|ref|NP_001045586.1| Os02g0101100 [Oryza sativa Japonica Group] gi|41052888|dbj|BAD07800.1| translation initiation factor 3 (IF-3)-like protein [Oryza sativa Japonica Group] gi|41053222|dbj|BAD08183.1| translation initiation factor 3 (IF-3)-like protein [Oryza sativa Japonica Group] gi|113535117|dbj|BAF07500.1| Os02g0101100 [Oryza sativa Japonica Group] gi|215695533|dbj|BAG90724.1| unnamed protein product [Oryza sativa Japonica Group] gi|218189858|gb|EEC72285.1| hypothetical protein OsI_05453 [Oryza sativa Indica Group] gi|222621989|gb|EEE56121.1| hypothetical protein OsJ_04988 [Oryza sativa Japonica Group] Length = 519 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-----GIKEVK 55 +Q+A +LDLVE+ P VCKI+D K +Y E K + + KEV+ Sbjct: 93 LQLAARMDLDLVEVHRKSDPPVCKIMDFHKEKYKKDVKEKERLKTKSAIVLRGGENKEVR 152 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + +L DL+VK I + G +VK G E +DLG LS + ++ Sbjct: 153 FKGKTELKDLKVKADGITRLMERGYRVKCMAMPSGNE--EEDLGGP-LSRLLGLIQDVCI 209 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 210 VESGPHLDSKHAYVIV 225 >gi|186686941|ref|YP_001870134.1| initiation factor 3 [Nostoc punctiforme PCC 73102] gi|186469293|gb|ACC85093.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LQLAESLELDLVLVSEGKEAPVAKILNYGKLQYQKKKRQAQSARP----VVKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D +++++ G+L G VK +V+ RGRE ++D ELL + + ++ Sbjct: 74 GVADYKLRIEQAVGWLSKGDSVKFAVRLRGREHQYRDQAGELLDRVVSDLKSVGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I ++ Sbjct: 132 -LDKRSLIALIIP 143 >gi|256370660|ref|YP_003108485.1| translation initiation factor 3 [Candidatus Sulcia muelleri SMDSEM] gi|256009452|gb|ACU52812.1| translation initiation factor 3 [Candidatus Sulcia muelleri SMDSEM] Length = 173 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A LDLVEI+S P + +I+D +K ++ + KQ+ KE+++ I Sbjct: 40 LKRASNLGLDLVEINSKTNPPIGRIIDYKKFL--YEQKKKTKKYKQEKMRTKEIRLTTQI 97 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K K + FL+ KVK ++ F+GR I+H++ G+ LL + +I+ P Sbjct: 98 CEHDLLFKRKHAERFLKSKEKVKFTIFFKGRSIIHKEKGKILLLKCASYLEKFGKIEQIP 157 Query: 121 KFEGRQMIMILSSK 134 EG++M +ILS K Sbjct: 158 IMEGKKMYIILSPK 171 >gi|78189670|ref|YP_380008.1| translation initiation factor IF-3 [Chlorobium chlorochromatii CaD3] gi|123729829|sp|Q3APW0|IF3_CHLCH RecName: Full=Translation initiation factor IF-3 gi|78171869|gb|ABB28965.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium chlorochromatii CaD3] Length = 226 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E N DL+E+ + P VCK +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RMAEERNQDLIEVQPNAAPPVCKFDNLGKLLYKMDKRDKDLKKKQKATTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSIVSNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFDP 176 >gi|302847472|ref|XP_002955270.1| hypothetical protein VOLCADRAFT_106738 [Volvox carteri f. nagariensis] gi|300259342|gb|EFJ43570.1| hypothetical protein VOLCADRAFT_106738 [Volvox carteri f. nagariensis] Length = 309 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 75/131 (57%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EA DL+ I+ +P + +I+ K +Y ++KNA E + K +T KEV++RP D Sbjct: 177 LADEAKEDLLLINPDASPPLVRIIGWSKYKYELEKNAKEKKAKSSATETKEVRLRPSTDS 236 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 DL VK+K FL G +VK+ +KF GRE+ ++ G+E+L N +++++ F Sbjct: 237 GDLAVKMKNCMKFLSKGDRVKLVMKFEGRELQFKEQGKEVLLNFISELASVAKVEGPLNF 296 Query: 123 EGRQMIMILSS 133 + ++LS Sbjct: 297 KTGTYTIMLSP 307 >gi|226954308|ref|ZP_03824772.1| protein chain initiation factor IF-3 [Acinetobacter sp. ATCC 27244] gi|294649365|ref|ZP_06726796.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226834934|gb|EEH67317.1| protein chain initiation factor IF-3 [Acinetobacter sp. ATCC 27244] gi|292824735|gb|EFF83507.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 112 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILRFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAEFGVVEQPPKMEGRQMGMLLGPKK 110 >gi|149374488|ref|ZP_01892262.1| Translation initiation factor 3 (IF-3) [Marinobacter algicola DG893] gi|149361191|gb|EDM49641.1| Translation initiation factor 3 (IF-3) [Marinobacter algicola DG893] Length = 112 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 73/110 (66%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +K A+KKQK T +KE+K RP + D QVKL+ + FL +G + KI+ Sbjct: 1 MDYGKKIFDEKKAKAAAKKKQKQTQVKELKFRPGTEEGDYQVKLRNLVRFLENGDRGKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ++G +L++ I+ E+++++ PK EGRQM M+++ + Sbjct: 61 IRFRGREMAHQEIGMKLMNRIEVDIEELAQVEQRPKMEGRQMTMVVAPRK 110 >gi|186685961|ref|YP_001869157.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|186468413|gb|ACC84214.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ LDLV + V KIL+ KL+Y +K ++ + +KEV+ I Sbjct: 18 LELAESLELDLVLVSEGKDVPVAKILNYGKLQYQKKKRQAQSARP----VVKEVRFGLNI 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D ++++ +L G VK +V+ RGRE +++ ELL + + ++ Sbjct: 74 GVADYKLRIDQAISWLGKGDSVKFAVRLRGREHQYREQAGELLDRVVTDLKSVGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I ++ Sbjct: 132 -LDKRSLIALIIP 143 >gi|17229860|ref|NP_486408.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120] gi|17131460|dbj|BAB74067.1| translation initiation factor 3 [Nostoc sp. PCC 7120] Length = 144 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+AQ LDLV + S V KIL+ KL+Y +K ++ + +KEV+ RP + Sbjct: 18 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARP----TVKEVRFRPNV 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D ++++ +L G VK +++ RGRE +++ ++L I ++ ++ Sbjct: 74 GAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I+ + Sbjct: 132 -LDKRSLIVQIMP 143 >gi|262374307|ref|ZP_06067583.1| translation initiation factor IF-3 [Acinetobacter junii SH205] gi|262310865|gb|EEY91953.1| translation initiation factor IF-3 [Acinetobacter junii SH205] Length = 112 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILRFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAEFGVVEQAPKMEGRQMGMLLGPKK 110 >gi|20532107|sp|Q8YUH8|IF3B_ANASP RecName: Full=Translation initiation factor IF-3-like Length = 163 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+AQ LDLV + S V KIL+ KL+Y +K ++ + +KEV+ RP + Sbjct: 37 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARP----TVKEVRFRPNV 92 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D ++++ +L G VK +++ RGRE +++ ++L I ++ ++ Sbjct: 93 GAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQS-- 150 Query: 121 KFEGRQMIMILSS 133 + R +I+ + Sbjct: 151 -LDKRSLIVQIMP 162 >gi|184156916|ref|YP_001845255.1| translation initiation factor 3 [Acinetobacter baumannii ACICU] gi|260556060|ref|ZP_05828279.1| translation initiation factor IF-3 [Acinetobacter baumannii ATCC 19606] gi|301346222|ref|ZP_07226963.1| translation initiation factor IF-3 [Acinetobacter baumannii AB056] gi|301510742|ref|ZP_07235979.1| translation initiation factor IF-3 [Acinetobacter baumannii AB058] gi|301596042|ref|ZP_07241050.1| translation initiation factor IF-3 [Acinetobacter baumannii AB059] gi|332856895|ref|ZP_08436304.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013150] gi|332867202|ref|ZP_08437467.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013113] gi|332874007|ref|ZP_08441942.1| translation initiation factor IF-3 [Acinetobacter baumannii 6014059] gi|183208510|gb|ACC55908.1| Translation initiation factor 3 (IF-3) [Acinetobacter baumannii ACICU] gi|193076380|gb|ABO11044.2| protein chain initiation factor IF-3 [Acinetobacter baumannii ATCC 17978] gi|260410115|gb|EEX03414.1| translation initiation factor IF-3 [Acinetobacter baumannii ATCC 19606] gi|322506812|gb|ADX02266.1| Translation initiation factor IF-3 [Acinetobacter baumannii 1656-2] gi|323516681|gb|ADX91062.1| translation initiation factor 3 [Acinetobacter baumannii TCDC-AB0715] gi|332726949|gb|EGJ58454.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013150] gi|332734141|gb|EGJ65273.1| translation initiation factor IF-3 [Acinetobacter baumannii 6013113] gi|332737748|gb|EGJ68640.1| translation initiation factor IF-3 [Acinetobacter baumannii 6014059] Length = 112 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 70/110 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E+ ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLLGPKK 110 >gi|299771534|ref|YP_003733560.1| translation initiation factor IF-3 [Acinetobacter sp. DR1] gi|298701622|gb|ADI92187.1| translation initiation factor IF-3 [Acinetobacter sp. DR1] Length = 112 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAEYGVVEQAPKMEGRQMGMLLGPKK 110 >gi|293610406|ref|ZP_06692707.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827638|gb|EFF86002.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124562|gb|ADY84085.1| protein chain initiation factor IF-3 [Acinetobacter calcoaceticus PHEA-2] Length = 112 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAEFGVVEQAPKMEGRQMGMLLGPKK 110 >gi|301059173|ref|ZP_07200113.1| translation initiation factor IF-3, C-terminal domain protein [delta proteobacterium NaphS2] gi|300446721|gb|EFK10546.1| translation initiation factor IF-3, C-terminal domain protein [delta proteobacterium NaphS2] Length = 107 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 1/107 (0%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 K RY K EARKK + +KE+K+RP HDL K+K + FL +VK+SV F Sbjct: 1 GKFRYEASKKVQEARKKTRGGQMKEIKLRPNTQDHDLGFKIKNLKSFLDKKHRVKVSVFF 60 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ-MIMILSSK 134 RGRE+ G +LL + E ++ +D P E R M M++ K Sbjct: 61 RGREMAFMQAGEDLLQRVAEDVSDVGTVDQPPSREARNRMTMVIVPK 107 >gi|75906413|ref|YP_320709.1| translation initiation factor IF-3 [Anabaena variabilis ATCC 29413] gi|75700138|gb|ABA19814.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena variabilis ATCC 29413] Length = 144 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+AQ LDLV + S V KIL+ KL+Y +K ++ + +KEV+ RP + Sbjct: 18 LQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARP----TVKEVRFRPNV 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D ++++ +L G VK +++ RGRE +++ ++L I + ++ Sbjct: 74 GAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQAGKVQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I+ + Sbjct: 132 -LDKRSLIVQIMP 143 >gi|260551942|ref|ZP_05825804.1| translation initiation factor 3 [Acinetobacter sp. RUH2624] gi|260405345|gb|EEW98840.1| translation initiation factor 3 [Acinetobacter sp. RUH2624] Length = 112 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEADVAEFGIVEQAPKMEGRQMGMLLGPKK 110 >gi|285028549|gb|ADC34596.1| translation initation factor IF-3-like protein [uncultured prokaryote] Length = 82 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 52/82 (63%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 +LDLVE+ P VCKI+D K RY + A E+RK Q++T IKE K+RP ID HD + Sbjct: 1 DLDLVEVAPEARPPVCKIMDYGKFRYEAAQKARESRKHQQNTVIKEQKLRPKIDDHDYET 60 Query: 68 KLKAIDGFLRDGCKVKISVKFR 89 K + FL G KVK+++ FR Sbjct: 61 KKGHVVRFLDAGAKVKVTIMFR 82 >gi|15828730|ref|NP_326090.1| translation initiation factor IF-3 [Mycoplasma pulmonis UAB CTIP] gi|14089672|emb|CAC13432.1| TRANSLATION INITIATION FACTOR IF-3 [Mycoplasma pulmonis] Length = 236 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ DLV I P + +ILD K +Y +K E ++KQ + +++++ P+I Sbjct: 83 LDIARGEKKDLVLISVQPKP-IARILDYGKFKYDRKKKEKEQKEKQTNINNRQIRLTPLI 141 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K K L G ++K+S+KF+GREI ++LG + L+ E+ +I++ID EP Sbjct: 142 GDHDLLTKAKKTRELLLKGDRIKVSLKFKGREIARKELGIDTLNRFYEQVEDIAKIDKEP 201 Query: 121 KF-EGRQMIMILSS 133 K + R + M L Sbjct: 202 KLNQDRFLDMYLHP 215 >gi|262281010|ref|ZP_06058793.1| translation initiation factor IF-3 [Acinetobacter calcoaceticus RUH2202] gi|262257910|gb|EEY76645.1| translation initiation factor IF-3 [Acinetobacter calcoaceticus RUH2202] Length = 112 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 69/110 (62%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K + +++ +A+KKQ +KE+K+RP D+ D QVKL+AI FL +G KVKI+ Sbjct: 1 MDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKIT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ LG L I+ E ++ PK EGRQM M+L K Sbjct: 61 LRFRGREMAHQQLGLAQLQKIEVDVAEFGVVEQAPKMEGRQMGMLLGPKK 110 >gi|168019592|ref|XP_001762328.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686406|gb|EDQ72795.1| predicted protein [Physcomitrella patens subsp. patens] Length = 283 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ----KSTGIKEVKM 56 + AQ+A LDLVE+D P VCK++D K R+ ++K + RKKQ + +KEV+ Sbjct: 124 LNRAQQAGLDLVEVDGKADPPVCKLMDFSKERFKVKKQEKDLRKKQLERRRLDDLKEVRF 183 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 + DL +K + L G +VK+ V+F G + +++G +LL ++ Sbjct: 184 SSRTEQKDLDMKADVVTRLLVRGHRVKLVVQFHGNDKG-EEVGVKLLERAMNLLQAEFKV 242 Query: 117 DCEPKFEGRQMIMILSS 133 + P+ E + +++ Sbjct: 243 ENGPRVEKMRAWVMIRP 259 >gi|148536295|gb|ABQ85699.1| translation initiation factor IF3 [Mycoplasma caviae] Length = 206 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I P + +ILD K +Y +K A++KQ +++++ P+I Sbjct: 38 IEMAKEQRLDLVLISVQPKP-IARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPLI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK K FL +G ++K+S+KFRGRE+ +LG + L + +++ I + Sbjct: 97 GEHDLNVKAKKAREFLLEGDRIKVSLKFRGRELARPELGHKTLEKFYKAVEDLADIAKDA 156 Query: 121 KF-EGRQMIMILSSKCV 136 R + M L + Sbjct: 157 ALVNDRFLDMYLQPNKI 173 >gi|119358270|ref|YP_912914.1| translation initiation factor IF-3 [Chlorobium phaeobacteroides DSM 266] gi|166198955|sp|A1BJB3|IF3_CHLPD RecName: Full=Translation initiation factor IF-3 gi|119355619|gb|ABL66490.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium phaeobacteroides DSM 266] Length = 209 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 80/132 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK+ +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RLAEEKNFDLIEVQPNADPPVCKLDNLGKLIYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDRGLELAERLTERLSCVSNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|186683739|ref|YP_001866935.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102] gi|186466191|gb|ACC81992.1| initiation factor 3 [Nostoc punctiforme PCC 73102] Length = 144 Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+ LDLV + + KIL+ KL+Y +K ++ + +KEV+ + Sbjct: 18 LQLAESLELDLVVVSQGKEAPIAKILNYGKLQYQKKKRQSQSARP----TVKEVRFGLNV 73 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + D ++++ G+L G VK +++ RGRE ++D ELL I + ++ +I Sbjct: 74 GVADYNLRIEKAVGWLSKGDSVKFAIRLRGREHQYRDQAGELLDRIAKDLSQVGKIQS-- 131 Query: 121 KFEGRQMIMILSS 133 + R +I+ + Sbjct: 132 -LDKRSLIVQVIP 143 >gi|145219005|ref|YP_001129714.1| translation initiation factor IF-3 [Prosthecochloris vibrioformis DSM 265] gi|189028355|sp|A4SCK3|IF3_PROVI RecName: Full=Translation initiation factor IF-3 gi|145205169|gb|ABP36212.1| bacterial translation initiation factor 3 (bIF-3) [Chlorobium phaeovibrioides DSM 265] Length = 209 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 78/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA+E N DL+E+ + P VCK +L KL + + + + +KKQK+T +KE++ P D Sbjct: 45 RMAEERNTDLIEVQPNAEPPVCKFDNLGKLLFKMAQRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER + D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSVVGNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|189345704|ref|YP_001942233.1| translation initiation factor IF-3 [Chlorobium limicola DSM 245] gi|238692168|sp|B3EEC0|IF3_CHLL2 RecName: Full=Translation initiation factor IF-3 gi|189339851|gb|ACD89254.1| translation initiation factor IF-3 [Chlorobium limicola DSM 245] Length = 213 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 81/132 (61%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +MA++ NLDL+E+ + P VCK+ +L KL + + K + +KKQK+T +KE++ P D Sbjct: 45 RMAEDRNLDLIEVQPNAEPPVCKLDNLGKLLFKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKTAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSCVSNRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|332660397|gb|AEE85797.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 253 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 29/133 (21%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A++A LDLV + P V +++D I Sbjct: 115 VRRAEDAELDLVILSPDADPPVVRMMDYS----------------------------YNI 146 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D HD V+++A FL+DG KVK+ V +GRE +++ ELL + GE+ + + Sbjct: 147 DQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESK- 205 Query: 121 KFEGRQMIMILSS 133 F R + ++L Sbjct: 206 NFRDRNLFIVLVP 218 >gi|148536298|gb|ABQ85701.1| translation initiation factor IF3 [Mycoplasma fermentans] Length = 202 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I P + +ILD K +Y +K A++KQ +++++ P+I Sbjct: 38 IEMAKEQRLDLVLISVQPKP-IARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPLI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK + FL DG ++K+S+KFRGRE +LG + L + +++ I E Sbjct: 97 GEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTLEKFYKAVEDLADIAKEA 156 Query: 121 KF-EGRQMIMILSSKCV 136 + R + M L + Sbjct: 157 ELVNDRFLDMYLQPNKI 173 >gi|308189883|ref|YP_003922814.1| translation initiation factor IF-3 [Mycoplasma fermentans JER] gi|319777080|ref|YP_004136731.1| translation initiation factor if-3 [Mycoplasma fermentans M64] gi|307624625|gb|ADN68930.1| translation initiation factor IF-3 [Mycoplasma fermentans JER] gi|318038155|gb|ADV34354.1| Translation initiation factor IF-3 [Mycoplasma fermentans M64] Length = 206 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I P + +ILD K +Y +K A++KQ +++++ P+I Sbjct: 38 IEMAKEQRLDLVLISVQPKP-IARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPLI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK + FL DG ++K+S+KFRGRE +LG + L + +++ I E Sbjct: 97 GEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTLEKFYKAVEDLADIAKEA 156 Query: 121 KF-EGRQMIMILSSKCV 136 + R + M L + Sbjct: 157 ELVNDRFLDMYLQPNKI 173 >gi|238809864|dbj|BAH69654.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 218 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I P + +ILD K +Y +K A++KQ +++++ P+I Sbjct: 50 IEMAKEQRLDLVLISVQPKP-IARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPLI 108 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK + FL DG ++K+S+KFRGRE +LG + L + +++ I E Sbjct: 109 GEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTLEKFYKAVEDLADIAKEA 168 Query: 121 KF-EGRQMIMILSSKCV 136 + R + M L + Sbjct: 169 ELVNDRFLDMYLQPNKI 185 >gi|462397|sp|Q05426|IF3_MYCFE RecName: Full=Translation initiation factor IF-3 gi|150149|gb|AAA25413.1| translation initiation factor IF3 [Mycoplasma fermentans] Length = 212 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I P + +ILD K +Y +K A++KQ +++++ P+I Sbjct: 44 IEMAKEQRLDLVLISVQPKP-IARILDYGKFKYERKKKQKAAKEKQTVIQNRQIRLTPLI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL VK + FL DG ++K+S+KFRGRE +LG + L + +++ I E Sbjct: 103 GEHDLNVKARKAKEFLLDGDRIKVSLKFRGRESARPELGHKTLEKFYKAVEDLADIAKEA 162 Query: 121 KF-EGRQMIMILSSKCV 136 + R + M L + Sbjct: 163 ELVNDRFLDMYLQPNKI 179 >gi|148284342|ref|YP_001248432.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Boryong] gi|146739781|emb|CAM79648.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Boryong] Length = 180 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ A LDLVE +CKILD K +Y I+K A +A+KKQ +KE+K+RP I Sbjct: 44 ISKAEMAGLDLVEFS-QSDLPLCKILDYSKYKYEIKKKAQQAKKKQTKVTVKEIKLRPNI 102 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL +K+K+I FL KV ISV F+GREI+H + G+++L NI + +ID P Sbjct: 103 ADGDLAIKIKSIKQFLSKNNKVNISVIFKGREIVHAEFGKQILDNIIDVCQVEGKIDSPP 162 Query: 121 KFEGRQMIMILSS 133 K +G+ + M +S Sbjct: 163 KMQGQVITMTMSP 175 >gi|168004365|ref|XP_001754882.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693986|gb|EDQ80336.1| predicted protein [Physcomitrella patens subsp. patens] Length = 312 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 5/137 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ----KSTGIKEVKM 56 + AQ+ LDLVE+D P VCK++D + R+ ++K + RKKQ + +KEV+ Sbjct: 137 LNRAQQEGLDLVEVDGKADPPVCKLMDFSRERFKVKKQEKDLRKKQLERRRLDDLKEVRF 196 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 + DL++K + L G +VK++V+F G + +++G ELL G ++ Sbjct: 197 SSRTEQKDLEMKADVVTRLLTRGHRVKLAVQFHGNDKG-EEVGVELLERAMRLLGVEVKV 255 Query: 117 DCEPKFEGRQMIMILSS 133 + P+ E + +++ Sbjct: 256 ENGPRVEKMRAWVMIRP 272 >gi|12831413|gb|AAK02071.1| initiation factor 3 [Vibrio metschnikovii] Length = 109 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 72/108 (66%), Gaps = 1/108 (0%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 K + K A E +KKQK IKE+K RP D+ D QVKL+ + FL +G KVK++++F Sbjct: 1 GKFLFEKSKAAEEQKKKQKQVQIKEIKFRPGTDIGDYQVKLRNLTSFLEEGNKVKVTIRF 60 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 RGRE+ HQ++G ++L+ +KE +I+ ++ P + E RQMIM+L+ K Sbjct: 61 RGREMAHQEIGVDVLNRLKEDTADIAVVESFPSRIEARQMIMMLAPKK 108 >gi|85057942|ref|YP_456858.1| protein translation initiation factor 3 [Aster yellows witches'-broom phytoplasma AYWB] gi|84790047|gb|ABC65779.1| bacterial protein translation initiation factor 3 [Aster yellows witches'-broom phytoplasma AYWB] Length = 115 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 67/112 (59%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCK 81 V ++++ +K RY QK E +KK + + +KE+++ P ID +DL K+K FL+ G K Sbjct: 2 VARLMNYQKHRYNQQKKLRETKKKTQISVLKEIRLNPTIDKNDLNTKIKQAQKFLKQGDK 61 Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 VK+S++FRGR I + LG + + + +S+I+ K +G Q+ +LS Sbjct: 62 VKVSMRFRGRMINNFQLGETVFKQVMQDLKNLSQIETPLKLQGNQLTAVLSP 113 >gi|255082722|ref|XP_002504347.1| predicted protein [Micromonas sp. RCC299] gi|226519615|gb|ACO65605.1| predicted protein [Micromonas sp. RCC299] Length = 390 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 10/139 (7%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQ----KSTGIKEVKMR 57 + A++A LDLVE+++ P VC++LD RY ++ EARKK + +KE+++ Sbjct: 225 KRARDAGLDLVEMNAKAVPPVCRMLDYDAFRYELRVKEREARKKAVERRRHDQVKELRLS 284 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGRE----IMHQDLGRELLSNIKERFGEI 113 I +DL+ K + FL G KV ++F+ + M D G L Sbjct: 285 ARISTNDLRTKADQANRFLEQGHKVTARIEFKSNDGVKANMRPDAGAILYEEFCAMLNPH 344 Query: 114 SRIDCEPKFEGRQMIMILS 132 +++ E K G MIL+ Sbjct: 345 -KVEVEGKMVGPS-HMILT 361 >gi|189183872|ref|YP_001937657.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Ikeda] gi|189180643|dbj|BAG40423.1| translation initiation factor IF-3 [Orientia tsutsugamushi str. Ikeda] Length = 167 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + A+ A LDLVE +CKILD K +Y I+K A +A+KKQ +KE+K+RP I Sbjct: 31 ISKAEMAGLDLVEFS-QSDLPLCKILDYSKYKYEIKKKAQQAKKKQTKVTVKEIKLRPNI 89 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 DL +K+K+I FL KV ISV F+GREI+H + GR++L NI + +ID P Sbjct: 90 ADGDLAIKIKSIKQFLSKNNKVNISVIFKGREIVHAEFGRQILDNIIDVCQVEGKIDSPP 149 Query: 121 KFEGRQMIMILSS 133 K +G+ + M +S Sbjct: 150 KMQGQVITMTMSP 162 >gi|78486007|ref|YP_391932.1| initiation factor 3 [Thiomicrospira crunogena XCL-2] gi|78364293|gb|ABB42258.1| bacterial translation initiation factor 3 (bIF-3) [Thiomicrospira crunogena XCL-2] Length = 112 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 69/108 (63%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K Y QK EA+KKQK +KEVK RP + D VK++ + FL +G +VK++ Sbjct: 1 MDYGKYVYQQQKKKHEAKKKQKQVQVKEVKFRPGTEQGDYDVKMRNLMKFLENGDRVKVT 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 + FRGREI H++LG +L +++ E++ ++ PK EGRQ+ M+++ Sbjct: 61 IWFRGREITHKELGMRMLERVRDDIQEVATVEQMPKMEGRQLQMMVAP 108 >gi|307128592|ref|YP_003880622.1| translation initiation factor 3 [Candidatus Sulcia muelleri CARI] gi|306483054|gb|ADM89924.1| translation initiation factor 3 [Candidatus Sulcia muelleri CARI] Length = 170 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 73/135 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A LDLVEI+ P +C+IL+ +K Y +K + + KQ+ KE+++ P I Sbjct: 36 LNIAFNTGLDLVEINPKTDPPICRILEYKKYLYEQKKKQKQLKYKQEKIITKEIRLSPQI 95 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD K+K + FL+ KVK ++ F+GR I+H+ G LL +I+ P Sbjct: 96 CEHDTFFKIKHAEKFLKTKKKVKFTIFFKGRSIIHKKKGEILLLECANYLENFGKIEQMP 155 Query: 121 KFEGRQMIMILSSKC 135 EG++M +IL+ K Sbjct: 156 IMEGKKMFIILTPKK 170 >gi|254415472|ref|ZP_05029232.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196177653|gb|EDX72657.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 134 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ LDLV + V KILD K +Y +K ++ K +KEVK+RP + Sbjct: 8 LQLAKDVGLDLVVVSERKDAPVAKILDYGKHQYQQKKRQRQSSKP----TLKEVKLRPNV 63 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 D +++ +L G VK V+ RGRE H+D ELL + GE+ ++ Sbjct: 64 GESDYSLRINRAVEWLSKGDSVKFQVRLRGREHQHRDRATELLERVVSDLGEVGKVQS-- 121 Query: 121 KFEGRQMIMILSS 133 F+ R +++ + Sbjct: 122 -FDRRALVVQIVP 133 >gi|110598677|ref|ZP_01386942.1| translation initiation factor IF-3 [Chlorobium ferrooxidans DSM 13031] gi|110339730|gb|EAT58240.1| translation initiation factor IF-3 [Chlorobium ferrooxidans DSM 13031] Length = 213 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK +L KL Y + K + +KKQK+T +KE++ P D Sbjct: 45 RVAEERNQDLIEVQPNAIPPVCKFDNLGKLLYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D EPK Sbjct: 105 KHDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSVVSTRDGEPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|148826979|ref|YP_001291732.1| translation initiation factor IF-3 [Haemophilus influenzae PittGG] gi|148718221|gb|ABQ99348.1| translation initiation factor IF-3 [Haemophilus influenzae PittGG] Length = 89 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Query: 49 TGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKE 108 +KE+K RP D D QVKL+++ FL DG K KI+V+FRGRE+ HQD+G ++L +K Sbjct: 1 MQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITVRFRGREMAHQDIGLDVLERVKN 60 Query: 109 RFGEISRIDCEP-KFEGRQMIMILSSKC 135 EIS ++ P K EGRQ +M+L+ K Sbjct: 61 DLAEISVVESAPGKLEGRQAVMVLAPKK 88 >gi|20138508|sp|Q98QV2|IF3_MYCPU RecName: Full=Translation initiation factor IF-3 Length = 199 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ DLV I P + +ILD K +Y +K E ++KQ + +++++ P+I Sbjct: 46 LDIARGEKKDLVLISVQPKP-IARILDYGKFKYDRKKKEKEQKEKQTNINNRQIRLTPLI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K K L G ++K+S+KF+GREI ++LG + L+ E+ +I++ID EP Sbjct: 105 GDHDLLTKAKKTRELLLKGDRIKVSLKFKGREIARKELGIDTLNRFYEQVEDIAKIDKEP 164 Query: 121 KF-EGRQMIMILSS 133 K + R + M L Sbjct: 165 KLNQDRFLDMYLHP 178 >gi|253758563|ref|XP_002488886.1| hypothetical protein SORBIDRAFT_2483s002010 [Sorghum bicolor] gi|241947287|gb|EES20432.1| hypothetical protein SORBIDRAFT_2483s002010 [Sorghum bicolor] Length = 107 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 14/121 (11%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 MA NLDLV+I + P K EA+K QK +KEV++ I+ Sbjct: 1 MAITKNLDLVKIVPNGAPP--------------GKKEKEAKKNQKVVSLKEVRLSAKIEE 46 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 HD VK+K+ FL+DG KVK+S+KFRGRE+ + G+++L E+ + +PK Sbjct: 47 HDFDVKVKSAYKFLKDGDKVKVSIKFRGREMKYTSDGKDVLEKFTSVVSEVGVAERQPKL 106 Query: 123 E 123 E Sbjct: 107 E 107 >gi|194335336|ref|YP_002017130.1| translation initiation factor IF-3 [Pelodictyon phaeoclathratiforme BU-1] gi|194307813|gb|ACF42513.1| translation initiation factor IF-3 [Pelodictyon phaeoclathratiforme BU-1] Length = 210 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 79/132 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A+E N DL+E+ + P VCK +L +L Y + K + +KKQK+T +KE++ P D Sbjct: 45 RVAEERNQDLIEVQPNAEPPVCKFDNLGRLLYKMDKRDKDLKKKQKTTTLKELRFHPNTD 104 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 HD K ++ FLR G +V+ ++ F GR I+++D G EL + ER +S D +PK Sbjct: 105 KHDFDFKSAHLEEFLRKGNRVRATIVFLGRSIIYKDKGLELAERLTERLSIVSTRDGDPK 164 Query: 122 FEGRQMIMILSS 133 FEG+++ + Sbjct: 165 FEGKKLFVYFEP 176 >gi|145351023|ref|XP_001419887.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580120|gb|ABO98180.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 151 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%) Query: 8 NLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK----KQKSTGIKEVKMRPVIDLH 63 +DLVE++ + +P VC+ILD ++RY I+K A E +K QK IKE+++ ID+H Sbjct: 14 GMDLVEVNGNASPPVCRILDYERVRYDIRKRAKEQKKAVSAAQKRDVIKELRLTAKIDVH 73 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD----LGRELLSNIKERFGEISRIDCE 119 DL VK+ FL G +V + F+ + + QD G E++ NI ++ + + Sbjct: 74 DLNVKINGAKKFLDAGNRVTFRIMFKNSDGIAQDKRATRGAEIMDNIISMLEDVEVV-LK 132 Query: 120 PKFEG-RQMIMIL 131 PK G M L Sbjct: 133 PKMVGANHMTCSL 145 >gi|218191737|gb|EEC74164.1| hypothetical protein OsI_09264 [Oryza sativa Indica Group] Length = 305 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 6/141 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKK--QKSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 116 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 175 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 176 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 235 Query: 116 IDCEPKFEGRQMIMILSSKCV 136 + + F+ R + ++L + Sbjct: 236 EESK-NFQERNIYLVLVPNKI 255 >gi|206890678|ref|YP_002249046.1| translation initiation factor IF-3, C-terminal domain [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742616|gb|ACI21673.1| translation initiation factor IF-3, C-terminal domain [Thermodesulfovibrio yellowstonii DSM 11347] Length = 108 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 5/109 (4%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K +Y ++K + + +KE+K+RP I HDLQ+K+K I FL DG K +I+ Sbjct: 1 MDYGKYKYQLEKKGSSKK----PSTVKEIKIRPQISDHDLQLKVKHIKRFLEDGDKARIT 56 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEIS-RIDCEPKFEGRQMIMILSS 133 + FRGREI+H ++G ++ IK + +I+ EP+ EG M MI++ Sbjct: 57 LFFRGREIVHSEMGMKVFDKIKALLVGFAHKIEQEPRLEGNSMSMIIAP 105 >gi|2506777|sp|P47438|IF3_MYCGE RecName: Full=Translation initiation factor IF-3 Length = 184 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 59/119 (49%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV I + T + K+LD + Y +++ +A+K Q KEV ++P I Sbjct: 48 LKLAQEKQLDLVLIAPNPTKPIVKLLDFGRYTYDLKRKKRQAKKNQTIIQTKEVVVKPTI 107 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 HDL+ + K ++ G VK V+ GR +L ++ + + ++ I Sbjct: 108 AKHDLEFRAKQSKNWIEKGHHVKFIVRAFGRVSTRIELIEKVFDDFYQLVKDVVEIQKP 166 >gi|242066810|ref|XP_002454694.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor] gi|241934525|gb|EES07670.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor] Length = 314 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 6/141 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEA--RKKQKSTGIKEVK 55 +++A + +L L + P V ++ D +K RY QK R K G+KE+K Sbjct: 122 VKIADDNDLILAILSLDGDPPVLRLFEERDYKKHRYEQQKKKKIQQKRSVAKRMGLKELK 181 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 182 MGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVNLKGRENLYKKEAIELLRRFQNDVGELAT 241 Query: 116 IDCEPKFEGRQMIMILSSKCV 136 + + F R + ++L + Sbjct: 242 EESK-NFAERNIYLVLVPNKI 261 >gi|222623832|gb|EEE57964.1| hypothetical protein OsJ_08701 [Oryza sativa Japonica Group] Length = 305 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 6/141 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKK--QKSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 116 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 175 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 176 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 235 Query: 116 IDCEPKFEGRQMIMILSSKCV 136 + + F+ R + ++L + Sbjct: 236 EESK-NFQERNIYLVLVPNKI 255 >gi|6729964|pdb|2IFE|A Chain A, Translation Initiation Factor If3 From Escherichia Coli Ribosome Binding Domain (Residues 84-180) Length = 100 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 1/84 (1%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 E+K RP D D QVKL+++ FL +G K KI+++FRGRE+ HQ +G E+L+ +K+ E Sbjct: 15 EIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQE 74 Query: 113 ISRIDCEP-KFEGRQMIMILSSKC 135 ++ ++ P K EGRQMIM+L+ K Sbjct: 75 LAVVESFPTKIEGRQMIMVLAPKK 98 >gi|12045048|ref|NP_072858.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|255660201|ref|ZP_05405610.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|7443496|pir||T09691 translation initiation factor IF-3 - Mycoplasma genitalium gi|3844793|gb|AAC71414.1| translation initiation factor IF-3 [Mycoplasma genitalium G37] gi|166078910|gb|ABY79528.1| translation initiation factor IF-3 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 181 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 59/119 (49%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++AQE LDLV I + T + K+LD + Y +++ +A+K Q KEV ++P I Sbjct: 45 LKLAQEKQLDLVLIAPNPTKPIVKLLDFGRYTYDLKRKKRQAKKNQTIIQTKEVVVKPTI 104 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 HDL+ + K ++ G VK V+ GR +L ++ + + ++ I Sbjct: 105 AKHDLEFRAKQSKNWIEKGHHVKFIVRAFGRVSTRIELIEKVFDDFYQLVKDVVEIQKP 163 >gi|212722014|ref|NP_001131934.1| hypothetical protein LOC100193325 [Zea mays] gi|194692956|gb|ACF80562.1| unknown [Zea mays] Length = 317 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 6/141 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILD---LRKLRYTIQKNAVEA--RKKQKSTGIKEVK 55 +Q+A + +L L + P V ++ D +K RY QK R K G+KE+K Sbjct: 121 VQIADDNDLILAILSMDGDPPVLRLFDERDYKKHRYEQQKKKKIQQKRSVAKRMGLKELK 180 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 181 MGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVNLKGRENLYKKEAIELLRRFQNDVGELAT 240 Query: 116 IDCEPKFEGRQMIMILSSKCV 136 + + F R + ++L + Sbjct: 241 EESK-NFAERNIYLVLVPNKI 260 >gi|313678439|ref|YP_004056179.1| translation initiation factor IF-3 [Mycoplasma bovis PG45] gi|312950802|gb|ADR25397.1| translation initiation factor IF-3 [Mycoplasma bovis PG45] Length = 202 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ LDLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKLDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEG-RQMIMILSSKCV 136 + G R + M L V Sbjct: 149 EIIGERFLDMYLQPNKV 165 >gi|193216575|ref|YP_001999817.1| translation initiation factor IF-3 [Mycoplasma arthritidis 158L3-1] gi|193001898|gb|ACF07113.1| translation initiation factor IF-3 [Mycoplasma arthritidis 158L3-1] Length = 171 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A E N+DLV I + +I+D K +Y +K ++ Q T +E+++ P+I Sbjct: 18 LEKAYEYNMDLVLIAIENNKPITRIIDYGKFKYDKKKKQKSLKENQSVTINREIRLTPMI 77 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL K K FL +G +VK+SVKFRGRE QDLG ++L+ ++++I E Sbjct: 78 GDHDLATKAKKAKEFLLEGNRVKVSVKFRGRERTRQDLGDDILAKFFALLEDVAKISKEA 137 Query: 121 KFE-GRQMIMIL 131 GR + M L Sbjct: 138 TLSGGRFLDMYL 149 >gi|170761849|ref|YP_001752310.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920375|ref|ZP_02931704.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508742|ref|ZP_02958218.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701944|ref|ZP_02971585.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168827426|gb|ACA32688.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902807|gb|EDT49096.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675672|gb|EDT87577.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700695|gb|EDU18977.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 187 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 57/121 (47%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 51 LNLAASKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+V+ + +L D VK ++ RGR + + + + + Sbjct: 111 GEHDLKVRAENAKRWLEDKDNVKFVIEARGRMCTKDEFIVQAYEKFIDLIKDYGTVVQAN 170 Query: 121 K 121 K Sbjct: 171 K 171 >gi|171920582|ref|ZP_02931843.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178757|ref|ZP_02964565.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024254|ref|ZP_02996950.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518492|ref|ZP_03003973.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524041|ref|ZP_03004142.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867715|ref|ZP_03079716.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273346|ref|ZP_03205882.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554380|ref|YP_002284626.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550417|ref|ZP_03771366.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225550991|ref|ZP_03771937.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903286|gb|EDT49575.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209368|gb|EDU06411.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018916|gb|EDU56956.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997946|gb|EDU67043.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659908|gb|EDX53288.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660570|gb|EDX53826.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249866|gb|EDY74646.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541881|gb|ACI60110.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378806|gb|EEH01171.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379571|gb|EEH01933.1| translation initiation factor IF-3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 187 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 57/121 (47%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 51 LNLATSKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 110 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+V+ + +L D VK ++ RGR + + + + + Sbjct: 111 GEHDLKVRAENAKRWLEDKDNVKFVIEARGRMCTKDEFILQAYEKFIDLIKDYGTVVQAN 170 Query: 121 K 121 K Sbjct: 171 K 171 >gi|254421673|ref|ZP_05035391.1| translation initiation factor IF-3, C-terminal domain [Synechococcus sp. PCC 7335] gi|196189162|gb|EDX84126.1| translation initiation factor IF-3, C-terminal domain [Synechococcus sp. PCC 7335] Length = 115 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%) Query: 13 EIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAI 72 + V KILD K +Y +K ++ + T +KEV++RP + D V++ Sbjct: 1 MVSPDQDTPVAKILDYGKHQYQSRKRQKQSAR----TSVKEVRLRPNVGDSDYMVRINKA 56 Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILS 132 +L G VK V+ RGRE H+D +LL+ + E ++S++ F+ R +++ + Sbjct: 57 IAWLERGDSVKFQVRLRGREHQHRDRATDLLNRVIEDLSKVSKVQT---FDRRSLMVQVV 113 Query: 133 S 133 Sbjct: 114 P 114 >gi|291320423|ref|YP_003515686.1| translation initiation factor IF 3 [Mycoplasma agalactiae] gi|290752757|emb|CBH40732.1| Translation initiation factor IF 3 [Mycoplasma agalactiae] Length = 202 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKMDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEG-RQMIMILSSKCV 136 + G R + M L V Sbjct: 149 EIIGERFLDMYLQPNKV 165 >gi|225848430|ref|YP_002728593.1| translation initiation factor IF-3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643240|gb|ACN98290.1| translation initiation factor IF-3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 110 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 65/110 (59%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K ++ +K EA+KKQ +KE+K + I+ HD + K+K I F++DG KV++ Sbjct: 1 MDYGKYKFEQKKKEKEAKKKQHVQEVKEMKFKLNIEKHDYETKIKHIREFIQDGDKVRVW 60 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 + FRGRE +H +LG +L I E +I+ ++ P EGR M+ L K Sbjct: 61 IWFRGRENVHPELGDKLAQKIIEDVSDIAVVEKTPVKEGRNMMFTLIPKK 110 >gi|148377738|ref|YP_001256614.1| translation initiation factor IF-3 [Mycoplasma agalactiae PG2] gi|148291784|emb|CAL59173.1| Translation initiation factor IF 3 [Mycoplasma agalactiae PG2] Length = 202 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+++ +DLV I P + +ILD K +Y +K A++KQ +++++ + Sbjct: 30 IEIAKDSKMDLVLIAVEPKP-IARILDYGKFKYERKKKQKAAKEKQTIIQNRQIRLTAMT 88 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K + FL DG ++K+S+KFRGREI +LG +++ E ++ EP Sbjct: 89 GDHDLKTKARKAFEFLLDGDRIKVSLKFRGREITRPELGYTMMNKFYELVEAVAEKTKEP 148 Query: 121 KFEG-RQMIMILSSKCV 136 + G R + M L V Sbjct: 149 EIIGERFLDMYLQPNKV 165 >gi|13357787|ref|NP_078061.1| translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|14194840|sp|Q9PQR4|IF3_UREPA RecName: Full=Translation initiation factor IF-3 gi|11277753|pir||D82914 translation initiation factor IF3 UU227 [imported] - Ureaplasma urealyticum gi|6899197|gb|AAF30636.1|AE002122_5 translation initiation factor IF3 [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 178 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 57/121 (47%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A NLDLV I V KILD K +Y ++ E+RK Q +KE+K++P+I Sbjct: 42 LNLAASKNLDLVVIAKKGNIPVTKILDYGKYKYEQKRRQKESRKNQTIIKVKEIKIKPMI 101 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+V+ + +L D VK ++ RGR + + + + + Sbjct: 102 GEHDLKVRAENAKRWLEDKDNVKFVIEARGRMCTKDEFIVQAYEKFIDLIKDYGTVVQAN 161 Query: 121 K 121 K Sbjct: 162 K 162 >gi|13507854|ref|NP_109803.1| translation initiation factor IF-3 [Mycoplasma pneumoniae M129] gi|2497284|sp|P78024|IF3_MYCPN RecName: Full=Translation initiation factor IF-3 gi|11379447|gb|AAG34732.1|AE000004_1 translation initiation factor IF3 [Mycoplasma pneumoniae M129] Length = 201 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I S+ + K+LD + Y +++ +++K Q IKEV ++P I Sbjct: 65 LKMAEEKQLDLVLIGSNPAKPIVKLLDFGRYTYDLKRKKRQSKKNQTIIQIKEVVVKPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HDL+ K K G+ G VK V+ GR +L ++ ++ + Sbjct: 125 AKHDLEFKAKQTTGWAEKGYHVKFVVRAFGRVSTRIELIEKVFNDFYLLVEPAVEVQKPL 184 Query: 121 KFEGRQMI-MILSSKC 135 + M +L + Sbjct: 185 TASSKTMYSALLVPRK 200 >gi|14278593|pdb|1I96|V Chain V, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) Length = 89 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 54/84 (64%) Query: 50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER 109 +K +K R ID HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E Sbjct: 1 EVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTED 60 Query: 110 FGEISRIDCEPKFEGRQMIMILSS 133 +++ ++ +P+ GR M M+L+ Sbjct: 61 LKDLAVVEMKPEMLGRDMNMLLAP 84 >gi|301633658|gb|ADK87212.1| translation initiation factor IF-3 [Mycoplasma pneumoniae FH] Length = 201 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 58/119 (48%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++MA+E LDLV I S+ + K+LD + Y +++ +++K Q IKEV ++P I Sbjct: 65 LKMAEEKQLDLVLIGSNPAKPIVKLLDFGRYTYDLKRKKRQSKKNQTIIQIKEVVVKPTI 124 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 HDL+ K K G+ G VK V+ GR +L ++ ++ + Sbjct: 125 AKHDLEFKAKQTTGWAEKGYHVKFVVRAFGRVSTRIELIEKVFNDFYLLVEPAVEVQKP 183 >gi|213156054|ref|YP_002318099.1| translation initiation factor IF-3 [Acinetobacter baumannii AB0057] gi|215484619|ref|YP_002326854.1| Translation initiation factor IF-3 [Acinetobacter baumannii AB307-0294] gi|239500700|ref|ZP_04660010.1| translation initiation factor IF-3 [Acinetobacter baumannii AB900] gi|213055214|gb|ACJ40116.1| translation initiation factor IF-3 [Acinetobacter baumannii AB0057] gi|213987801|gb|ACJ58100.1| Translation initiation factor IF-3 [Acinetobacter baumannii AB307-0294] Length = 106 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 42/87 (48%), Positives = 57/87 (65%) Query: 49 TGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKE 108 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 18 VQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEA 77 Query: 109 RFGEISRIDCEPKFEGRQMIMILSSKC 135 E+ ++ PK EGRQM M+L K Sbjct: 78 DVAELGVVEQAPKMEGRQMGMLLGPKK 104 >gi|47459464|ref|YP_016326.1| translation initiation factor IF-3 [Mycoplasma mobile 163K] gi|47458794|gb|AAT28115.1| translation initiation factor if-3 [Mycoplasma mobile 163K] Length = 214 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 5/129 (3%) Query: 1 MQMAQEANLDLVEID----SSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVK 55 + A+ NLDLV I P + +ILD +Y +K E ++KQ +E++ Sbjct: 36 LDKAKAENLDLVLISVGKSEKGEPRPIVRILDYGLFKYDRKKKQKELKEKQTIIENREIR 95 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + P I HD++ K K FL +G ++KIS+KFRGRE Q+LG E L +I++ Sbjct: 96 LTPNIGDHDIKFKAKKAREFLMNGDRLKISLKFRGREKTRQELGHETLEKFIALLDDIAQ 155 Query: 116 IDCEPKFEG 124 + E F G Sbjct: 156 VTKEATFTG 164 >gi|293363972|ref|ZP_06610708.1| translation initiation factor IF-3 [Mycoplasma alligatoris A21JP2] gi|292552462|gb|EFF41236.1| translation initiation factor IF-3 [Mycoplasma alligatoris A21JP2] Length = 195 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 2/137 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +++A+ +DLV I P + +ILD K +Y +K E ++KQ +EV++ P+I Sbjct: 38 IELARTEKMDLVLIQVEPKP-IARILDYGKFKYDRKKKQKEVKEKQVLVQNREVRLTPMI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL K K FL G ++K+S+K RGRE+ QDLG L+ +I+ I EP Sbjct: 97 GENDLMTKSKKAREFLLKGDRIKVSLKLRGREMGRQDLGLATLNKFFATLEDIAEITKEP 156 Query: 121 KF-EGRQMIMILSSKCV 136 K R + M L Sbjct: 157 KLVNDRFLDMNLQPNKT 173 >gi|242084348|ref|XP_002442599.1| hypothetical protein SORBIDRAFT_08g022730 [Sorghum bicolor] gi|241943292|gb|EES16437.1| hypothetical protein SORBIDRAFT_08g022730 [Sorghum bicolor] Length = 502 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-----GIKEVK 55 +Q+A ++DLVE+D + P KI+D K Y + E K + + KEV+ Sbjct: 101 LQLASRMDMDLVEVDRKLYPPAVKIMDFHKEMYKKETKVKERLKAKSAIVLRGGENKEVR 160 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + +L DL VK I + G +VK G E +DLG LS + ++ Sbjct: 161 FKGKTELKDLMVKADGITRLMERGYRVKCMAMPSGNEG--EDLGTP-LSRLLGLIQDVCI 217 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 218 VESGPHLDSKHAYVIV 233 >gi|126640662|ref|YP_001083646.1| protein chain initiation factor IF-3 [Acinetobacter baumannii ATCC 17978] Length = 89 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 42/87 (48%), Positives = 57/87 (65%) Query: 49 TGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKE 108 +KE+K+RP D+ D QVKL+AI FL +G KVKI+++FRGRE+ HQ LG L I+ Sbjct: 1 MQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEA 60 Query: 109 RFGEISRIDCEPKFEGRQMIMILSSKC 135 E+ ++ PK EGRQM M+L K Sbjct: 61 DVAELGVVEQAPKMEGRQMGMLLGPKK 87 >gi|115449193|ref|NP_001048376.1| Os02g0794400 [Oryza sativa Japonica Group] gi|47497598|dbj|BAD19668.1| translation initiation factor IF-3-like [Oryza sativa Japonica Group] gi|113537907|dbj|BAF10290.1| Os02g0794400 [Oryza sativa Japonica Group] Length = 200 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 6/141 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKK--QKSTGIKEVK 55 +Q+A E +L L + P V ++ D +K +Y QK +K+ K G+KE+K Sbjct: 11 VQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSVAKRMGLKELK 70 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 M ID+HD V+LKA FL+ G KVKI V +GRE +++ ELL + GE++ Sbjct: 71 MGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRRFQNDVGEMAT 130 Query: 116 IDCEPKFEGRQMIMILSSKCV 136 + + F+ R + ++L + Sbjct: 131 EESK-NFQERNIYLVLVPNKI 150 >gi|159484590|ref|XP_001700337.1| predicted protein [Chlamydomonas reinhardtii] gi|158272378|gb|EDO98179.1| predicted protein [Chlamydomonas reinhardtii] Length = 101 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 38/100 (38%), Positives = 60/100 (60%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A EA DL+ I+ +P V +I+ K +Y ++K A E + K KEV++RP D Sbjct: 2 LADEAKEDLLLINPDASPPVARIIAWSKYKYELEKGAKERKAKSTQQETKEVRLRPSTDS 61 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGREL 102 DL VK+K+ FL G +VK+ +KF GRE+ ++ G+E+ Sbjct: 62 GDLAVKIKSCQKFLAKGDRVKLVMKFEGRELQFREQGKEV 101 >gi|218680046|ref|ZP_03527943.1| translation initiation factor IF-3 [Rhizobium etli CIAT 894] Length = 80 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/80 (52%), Positives = 59/80 (73%) Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 KMRP ID HD +VK+KA+ F +G KVK+++KFRGRE+ HQ+LG LL +K E + Sbjct: 1 KMRPNIDTHDYEVKMKAMGRFFDEGDKVKVTLKFRGREMAHQELGMRLLQQVKADTTEFA 60 Query: 115 RIDCEPKFEGRQMIMILSSK 134 +++ EPK EGRQM+M+L+ K Sbjct: 61 KVEAEPKLEGRQMMMVLAPK 80 >gi|255545486|ref|XP_002513803.1| translation initiation factor if-3, putative [Ricinus communis] gi|223546889|gb|EEF48386.1| translation initiation factor if-3, putative [Ricinus communis] Length = 572 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 29/160 (18%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-----KEVK 55 ++ A++ LDLVE+D +V P VCKI+D K +Y Q + K + + KEV+ Sbjct: 111 LERAKKLKLDLVEVDRNVDPPVCKIMDFNKEKYKQQSKEKDRVKSKSEVTLRKGDCKEVR 170 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISV----KFRGR-------EIMHQDLGREL-- 102 + DL++K ++ + G +VK K GR ++ +++ + Sbjct: 171 FSAKTEQKDLKIKADSVIRLMERGYRVKCMALGSPKKGGRASKKHDGDLTEEEIAERIKQ 230 Query: 103 -----------LSNIKERFGEISRIDCEPKFEGRQMIMIL 131 LS + G+ I+ P+ E +Q +++ Sbjct: 231 EEEEKEELRATLSRLTALMGDEFIIESGPRVEKKQAYVLV 270 >gi|307104709|gb|EFN52961.1| hypothetical protein CHLNCDRAFT_137349 [Chlorella variabilis] Length = 292 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK----KQKSTGIKEVKM 56 + +A+ LDLV + P V ++++ K+ Y QK A K +Q++ +EV++ Sbjct: 104 INLAKAQGLDLVMVSPRAQPPVARLVEWSKVLYEQQKREKAATKAKLAQQRAAVAREVRI 163 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 I HDL VK+ FL DG +++ V F+G + + LGR++ + + ++ I Sbjct: 164 GCQIAEHDLAVKMAQARRFLEDGSPLRLVVTFKGGQQVA--LGRDVALYLIGQLTDLCTI 221 Query: 117 DCEPKFE---GRQMIMILSS 133 + + + Q ++L Sbjct: 222 KDQKQLQKPLKNQWAVVLVP 241 >gi|71894616|ref|YP_278724.1| translation initiation factor IF-3 [Mycoplasma synoviae 53] Length = 200 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A+E DLV I + TP V +ILD K +Y +KN E ++KQ + KE+++ P I Sbjct: 42 LQIAKEQGKDLVLIATDPTP-VVRILDYGKFKYISKKNQKEKKEKQSNVQNKEIRLTPFI 100 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 DL+ K K +L G ++K+S+K RGREI ++LG E L + +I Sbjct: 101 GKADLETKSKKAREYLLKGDRIKVSLKLRGREIARKELGFETLDKFYQTLVDIC 154 >gi|294155483|ref|YP_003559867.1| translation initiation factor IF-3 [Mycoplasma crocodyli MP145] gi|291600291|gb|ADE19787.1| translation initiation factor IF-3 [Mycoplasma crocodyli MP145] Length = 197 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ +DLV I P + +ILD K +Y +K E ++KQ +EV++ P+I Sbjct: 38 IDIAKSLKMDLVLIQVEPKP-IARILDYGKFKYDRKKKQKEVKEKQVVIQNREVRLTPMI 96 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +DL K + FL G ++K+S+K RGREI QDLG L+ +I+ I E Sbjct: 97 GENDLMTKSRKAREFLLKGDRIKVSLKLRGREIGRQDLGIATLNKFFATLEDIAEITKEA 156 Query: 121 KF-EGRQMIMILSS 133 K R + M L Sbjct: 157 KLVNERFLDMNLQP 170 >gi|312984097|ref|ZP_07791444.1| translation initiation factor IF-3 [Lactobacillus crispatus CTV-05] gi|310894451|gb|EFQ43526.1| translation initiation factor IF-3 [Lactobacillus crispatus CTV-05] Length = 81 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 43/74 (58%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ A +A LDL I + P V +I+D K R+ QK EARK K+ +KE+++ P I Sbjct: 8 LRRASDAGLDLALISPNAKPPVARIMDYGKYRFEQQKKLKEARKNSKTVSVKEIRLSPTI 67 Query: 61 DLHDLQVKLKAIDG 74 + +D + KLK + Sbjct: 68 EGNDFETKLKHVRK 81 >gi|147855678|emb|CAN79141.1| hypothetical protein VITISV_023967 [Vitis vinifera] Length = 713 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 48/174 (27%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK-KQKSTGIKEVKMRP- 58 ++ A++ LDLVE+ P VCKI+D +Y Q + K K S +K V + Sbjct: 112 LERARKLKLDLVEVQRKADPPVCKIMDFHXEKYKQQIKEKDRTKSKSTSKIVKVVHLEFL 171 Query: 59 -----------------------------------------VIDLHDLQVKLKAIDGFLR 77 ++ DL++K + + Sbjct: 172 HLMWRVIYDVSELTLRKRRLQGSSIFWENWHAYGRCDMGTLKLEAKDLKMKADMVKRLMD 231 Query: 78 DGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 G +VK G E QDLG LL+ + ++ ++ P+ E RQ +I+ Sbjct: 232 RGYRVKCMAM--GTE--DQDLG-GLLTRLSSLIEDVCFVESGPRVEKRQAYVIV 280 >gi|163752536|ref|ZP_02159722.1| translation initiation factor IF-3 [Shewanella benthica KT99] gi|161327591|gb|EDP98789.1| translation initiation factor IF-3 [Shewanella benthica KT99] Length = 76 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 35/73 (47%), Positives = 53/73 (72%) Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 +D QVKL+ + FL DG K K++++FRGRE+ HQ+LG +LL+ IK+ EI+ ++ PK Sbjct: 3 NDYQVKLRNLIRFLTDGDKAKVTLRFRGREMAHQNLGMKLLNRIKDDLAEIAVVESFPKM 62 Query: 123 EGRQMIMILSSKC 135 EGRQ +M+L+ K Sbjct: 63 EGRQAVMVLAPKK 75 >gi|71893478|ref|YP_278924.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae J] Length = 218 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEIDSSV---------TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I + KILD K RY I+K E ++KQ T Sbjct: 46 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 105 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 106 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 165 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 166 YIAKKSKEISQNGNFLVMHL 185 >gi|144227475|gb|AAZ44213.2| translation initiation factor IF-3 [Mycoplasma hyopneumoniae J] Length = 217 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEIDSSV---------TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I + KILD K RY I+K E ++KQ T Sbjct: 45 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 104 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 105 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 164 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 165 YIAKKSKEISQNGNFLVMHL 184 >gi|72080465|ref|YP_287523.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 7448] Length = 218 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEIDSSV---------TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I + KILD K RY I+K E ++KQ T Sbjct: 46 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 105 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 106 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 165 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 166 YIAKKSKEISQNGNFLVMHL 185 >gi|54020112|ref|YP_115769.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 232] gi|53987285|gb|AAV27486.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 232] gi|144575287|gb|AAZ53500.2| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 7448] gi|312601138|gb|ADQ90393.1| translation initiation factor IF-3 [Mycoplasma hyopneumoniae 168] Length = 217 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MQMAQEANLDLVEIDSSV---------TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI 51 +++A+ LDLV I + KILD K RY I+K E ++KQ T Sbjct: 45 IELAKSKGLDLVLISIKEVKTKDNQIQKVPIAKILDYGKFRYDIKKKKKEEKEKQSFTNN 104 Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 +E+++ I+ D+ VK K F+ DG +VKI+++FRGREI D GR+ L ++ Sbjct: 105 REIRVSFNINFQDILVKSKKAREFILDGDRVKIALRFRGREITRVDQGRKTLDIFYDQLK 164 Query: 112 EISRIDCEPKFEGRQMIMIL 131 I++ E G ++M L Sbjct: 165 YIAKKSKEISQNGNFLVMHL 184 >gi|34764975|ref|ZP_00145302.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885687|gb|EAA23102.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 112 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 40/69 (57%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A DLVEI S TP VCKI+D K +Y + EA+K QK IKE+K+ ID Sbjct: 38 NLASSQGYDLVEIAPSATPPVCKIMDYSKYKYEQTRKLKEAKKNQKQVVIKEIKVTARID 97 Query: 62 LHDLQVKLK 70 HDL+ KL Sbjct: 98 SHDLETKLN 106 >gi|168183456|ref|ZP_02618120.1| translation initiation factor IF-3 [Clostridium botulinum Bf] gi|182673373|gb|EDT85334.1| translation initiation factor IF-3 [Clostridium botulinum Bf] Length = 98 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 41/69 (59%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 ++A E LDLV I + P VCKI++ K Y K EA+K QK IKEV++ P I+ Sbjct: 30 KLADEKELDLVLIAPTAKPPVCKIMNYGKFLYEQTKKDKEAKKNQKVINIKEVRLSPTIE 89 Query: 62 LHDLQVKLK 70 HD+++K Sbjct: 90 AHDIEIKAN 98 >gi|312881549|ref|ZP_07741335.1| hypothetical protein VIBC2010_09427 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370826|gb|EFP98292.1| hypothetical protein VIBC2010_09427 [Vibrio caribbenthicus ATCC BAA-2122] Length = 99 Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 37/79 (46%), Positives = 50/79 (63%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A++A +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ Sbjct: 21 AEDAGMDLVEISPNAEPPVCRVMDYGKFLFEKSKAAKEQKKKQKQIQIKEVKFRPGTDIG 80 Query: 64 DLQVKLKAIDGFLRDGCKV 82 D QVKL+ + FL +G KV Sbjct: 81 DYQVKLRNLTRFLEEGNKV 99 >gi|212276222|ref|NP_001130770.1| hypothetical protein LOC100191874 [Zea mays] gi|194690072|gb|ACF79120.1| unknown [Zea mays] Length = 485 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST-----GIKEVK 55 +Q+A ++DLVE+D P VCKI+D + +Y + E K + + KEV+ Sbjct: 101 LQLAIRMDMDLVEVDRKSDPPVCKIMDFHREKYKKETKEKERLKTKSAIVLRGGENKEVR 160 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + +L DL VK I + G +VK G E +DLG LS + ++ Sbjct: 161 FKGKTELKDLMVKADGITRLMERGYRVKCMAMPSGNEG--EDLGTP-LSRLLGLIQDVCI 217 Query: 116 IDCEPKFEGRQMIMIL 131 ++ P + + +I+ Sbjct: 218 VESGPHLDSKHAYVIV 233 >gi|3273403|gb|AAC24724.1| IL-2 inducible gene protein [Mus musculus] Length = 147 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLV I + +I+D K +Y +K ++KQ T +E+++ P+I HDL+ K Sbjct: 1 MDLVLISIENNKPITRIMDYGKFKYDKKKKQKAVKEKQSVTINREIRLTPLIGQHDLETK 60 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKF-EGRQM 127 + F+ +G +VK+SVKFRGRE DLG ++L+ +I+++ E R + Sbjct: 61 ARKAREFILEGNRVKVSVKFRGRERSRTDLGEDILNKFYVLIEDIAKVSKEATLVNDRFL 120 Query: 128 IMIL 131 M + Sbjct: 121 DMYV 124 >gi|26554368|ref|NP_758302.1| translation initiation factor IF-3 [Mycoplasma penetrans HF-2] gi|26454378|dbj|BAC44706.1| translation initiation factor IF3 [Mycoplasma penetrans HF-2] Length = 170 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ +DLV S + KI+D K Y +K E +K Q KE+K++P I Sbjct: 35 LDLAKSKGMDLVLFSS-GDKPIAKIIDYGKFVYESKKKNKENKKNQVKVKNKEIKVKPAI 93 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 +HDLQV++K +L G +++ V GR DL EL + E G+++ + Sbjct: 94 GMHDLQVRVKNAKEWLESGYRIRFVVLTYGRIATKVDLVYELYNKFIEMVGDVATVQQPL 153 Query: 121 K 121 K Sbjct: 154 K 154 >gi|222475648|ref|YP_002564065.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] gi|255003641|ref|ZP_05278605.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Puerto Rico] gi|255004767|ref|ZP_05279568.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Virginia] gi|222419786|gb|ACM49809.1| translation initiation factor IF-3 (infC) [Anaplasma marginale str. Florida] Length = 105 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 53/87 (60%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 + +S+ +KE+K R I+ +D +KL + GF+ G KVK+S++F GRE+ ++++G +L Sbjct: 6 QARSSSLKELKFRLNIEDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILD 65 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMIL 131 + ++R + P+ +G M M+ Sbjct: 66 RLVNDTEGVARPESSPRMDGNVMSMVF 92 >gi|269958326|ref|YP_003328113.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] gi|269848155|gb|ACZ48799.1| translation initiation factor IF-3 [Anaplasma centrale str. Israel] Length = 105 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 53/87 (60%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 + +S+ +KE+K R I+ +D +KL + GF+ G KVK+S++F GRE+ ++++G +L Sbjct: 6 QARSSSLKELKFRLNIEDNDYNIKLNNLKGFIEKGNKVKVSIRFVGRELQYKEVGLGILD 65 Query: 105 NIKERFGEISRIDCEPKFEGRQMIMIL 131 + ++R + P+ +G M M+ Sbjct: 66 RLVNDTEGVARPESSPRMDGNVMSMVF 92 >gi|153827551|ref|ZP_01980218.1| translation initiation factor IF-3, C- domain [Vibrio cholerae MZO-2] gi|149738484|gb|EDM52880.1| translation initiation factor IF-3, C- domain [Vibrio cholerae MZO-2] gi|327485486|gb|AEA79892.1| Translation initiation factor 3 [Vibrio cholerae LMA3894-4] gi|327485491|gb|AEA79897.1| Translation initiation factor 3 [Vibrio cholerae LMA3894-4] Length = 76 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-K 121 D QVKL+ + FL +G KVK++++FRGRE+ HQD+G ++L+ +KE E + ++ P K Sbjct: 2 GDYQVKLRNLIRFLEEGNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTK 61 Query: 122 FEGRQMIMILSSKC 135 E RQMIM+L+ K Sbjct: 62 IEARQMIMVLAPKK 75 >gi|254720892|ref|ZP_05182683.1| translation initiation factor IF-3 [Bacillus anthracis str. A1055] Length = 90 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 34/59 (57%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + +A NLDLV + + P VC+I+D K R+ QK E RK QK +KEV++ P Sbjct: 31 LDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPN 89 >gi|167522727|ref|XP_001745701.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776050|gb|EDQ89672.1| predicted protein [Monosiga brevicollis MX1] Length = 272 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 13/140 (9%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEA-------RKKQKSTGIKEVKM 56 A++ +L +V + P VC+++ LR Q+ A EA ++ KE++M Sbjct: 105 ARQNSLSVVLVSQ--KPPVCRLMTTTHLR-ERQQKAREAASNKNNAKRPASKFPQKEIQM 161 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 I HDL +KLK I FL G +V++ +K R + ++ ++++ I++ EI+ + Sbjct: 162 TAWITEHDLSIKLKQIRKFLTKGNQVRLFIKHRKGQARDKEQQAQVIARIQDEMNEIAAL 221 Query: 117 DCEPKFEGRQ---MIMILSS 133 + PK G MI L Sbjct: 222 EEAPKSTGGYGTGMIATLLP 241 >gi|296314678|ref|ZP_06864619.1| translation initiation factor IF-3 protein [Neisseria polysaccharea ATCC 43768] gi|296838507|gb|EFH22445.1| translation initiation factor IF-3 protein [Neisseria polysaccharea ATCC 43768] Length = 68 Score = 98.9 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 50/67 (74%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 ++ I+ FL DG KVK++++FRGRE+ HQ LG +LL +KE E+++I+ PK EGRQM+ Sbjct: 1 MRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMV 60 Query: 129 MILSSKC 135 M+++ K Sbjct: 61 MMIAPKK 67 >gi|303291139|ref|XP_003064856.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453882|gb|EEH51190.1| predicted protein [Micromonas pusilla CCMP1545] Length = 305 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 4/105 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEA----RKKQKSTGIKEVKM 56 ++ A++ NLDLVE++ TP VC+++ RY ++ EA +++ IK +++ Sbjct: 182 LRRARDLNLDLVEVNPRATPPVCRLMSYDAYRYELKLKDKEARRRGVDRRRQDVIKTLRL 241 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE 101 I +DL+ K F+ G V+ ++F+ + + Sbjct: 242 SARISDNDLKTKAVQATKFMALGHGVRARIEFKKNDGVAPTAAMR 286 >gi|284931468|gb|ADC31406.1| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. F] Length = 209 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 61/128 (47%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M+ LD+V I ++ + + K++D K Y ++ +++KKQ +KE+ + + Sbjct: 59 LAMSDSKGLDVVVISNNPSTVIAKLMDYGKHVYEQKRKKRDSKKKQTVVKVKEINFKAGV 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ + K +L DG VK +++ R I ++L +E+ + + + + Sbjct: 119 GDHDIEWRAKKSIEWLNDGFHVKFTIRAFSRMITREELIKEVYDKFYQFIQDYADVQKPY 178 Query: 121 KFEGRQMI 128 R M Sbjct: 179 TKVSRNMY 186 >gi|240047801|ref|YP_002961189.1| Translation initiation factor IF-3 [Mycoplasma conjunctivae HRC/581] gi|239985373|emb|CAT05386.1| Translation initiation factor IF-3 [Mycoplasma conjunctivae] Length = 218 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 11/142 (7%) Query: 1 MQMAQEANLDLVEIDSS-----------VTPSVCKILDLRKLRYTIQKNAVEARKKQKST 49 ++MA+ +DLV I V V KILD K RY +K ++KQ T Sbjct: 45 VKMAKNKGMDLVLIAIKEIKDKEDDEKVVKIPVAKILDYGKFRYDSKKKKKLEKEKQSFT 104 Query: 50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER 109 +E+++ I+L D+++K K FL DG +VK++++FRGREI + G+++L + E Sbjct: 105 NNREIRISFNINLQDIKIKAKKAKEFLLDGDRVKVALRFRGREITKIEQGKQVLDSFFEE 164 Query: 110 FGEISRIDCEPKFEGRQMIMIL 131 I++ E G + M L Sbjct: 165 VKFIAKQSKEVNQSGNFLNMHL 186 >gi|294660393|ref|NP_853139.2| translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(low)] gi|284812051|gb|AAP56707.2| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(low)] gi|284930621|gb|ADC30560.1| Translation initiation factor IF-3 [Mycoplasma gallisepticum str. R(high)] Length = 209 Score = 95.8 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 59/128 (46%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + M LD+V I ++ + + K++D K Y ++ +++KKQ +KE+ + + Sbjct: 59 LAMGDSKGLDVVVISNNPSTVIAKLMDYGKHVYEQKRKKRDSKKKQTVVKVKEINFKAGV 118 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 HD++ + K +L DG VK +++ R I ++L +E+ + + + Sbjct: 119 GDHDIEWRAKKSIEWLNDGFHVKFTIRAFSRMITREELIKEVYDKFYQFIQNYADVQKPY 178 Query: 121 KFEGRQMI 128 R M Sbjct: 179 TKVSRNMY 186 >gi|304373307|ref|YP_003856516.1| translation initiation factor IF-3 [Mycoplasma hyorhinis HUB-1] gi|304309498|gb|ADM21978.1| translation initiation factor IF-3 [Mycoplasma hyorhinis HUB-1] gi|330723819|gb|AEC46189.1| translation initiation factor IF-3 [Mycoplasma hyorhinis MCLD] Length = 230 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 76/133 (57%), Gaps = 4/133 (3%) Query: 1 MQMAQEANLDLVEID---SSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKM 56 ++MA+E LD+V + SS TP + KILD K +Y +K ++KQ T +E+++ Sbjct: 63 IEMAKEQKLDVVVLSIDNSSGTPRPIAKILDYGKFKYERKKKQKVEKEKQSFTNNREIRL 122 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 I+L+D+++K K FL D +VK++++ RGRE + G+ +L++ + I+++ Sbjct: 123 SFGINLNDIKIKAKKAKEFLLDNDRVKVALRLRGRENTRPEQGKLILNSFFDEVKSIAKL 182 Query: 117 DCEPKFEGRQMIM 129 E + G + + Sbjct: 183 SKEMQSVGNFLTL 195 >gi|189025171|ref|YP_001935939.1| Initiation factor 3 [Brucella abortus S19] gi|306837674|ref|ZP_07470543.1| translation initiation factor IF-3 [Brucella sp. NF 2653] gi|306843536|ref|ZP_07476137.1| translation initiation factor IF-3 [Brucella sp. BO1] gi|189020743|gb|ACD73465.1| Initiation factor 3 [Brucella abortus S19] gi|306276227|gb|EFM57927.1| translation initiation factor IF-3 [Brucella sp. BO1] gi|306407232|gb|EFM63442.1| translation initiation factor IF-3 [Brucella sp. NF 2653] Length = 66 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 50/66 (75%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 +KA F +G KVK++++FRGRE+ HQ+LG +LL +KE EI++++ EPK EGRQM+ Sbjct: 1 MKAAQRFFEEGDKVKVTLRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMM 60 Query: 129 MILSSK 134 M+L+ + Sbjct: 61 MVLAPR 66 >gi|12323859|gb|AAG51900.1|AC023913_8 transcription factor, putative; 66207-62663 [Arabidopsis thaliana] Length = 574 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQK----NAVEARKKQKSTGIKEVKM 56 ++ A+E DLVE+ P VCKI+ Y K A R + IKE++ Sbjct: 140 LRRAKELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRF 199 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 P I+ DL+ K + G +VK Sbjct: 200 TPKIEAKDLKFKSDQALKLMESGYRVKCLA 229 >gi|30693047|ref|NP_174696.2| translation initiation factor 3 (IF-3) family protein [Arabidopsis thaliana] gi|45773942|gb|AAS76775.1| At1g34360 [Arabidopsis thaliana] gi|332193581|gb|AEE31702.1| translation initiation factor IF-3 [Arabidopsis thaliana] Length = 520 Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQK----NAVEARKKQKSTGIKEVKM 56 ++ A+E DLVE+ P VCKI+ Y K A R + IKE++ Sbjct: 112 LRRAKELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRF 171 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 P I+ DL+ K + G +VK Sbjct: 172 TPKIEAKDLKFKSDQALKLMESGYRVKCLA 201 >gi|325188187|emb|CCA22727.1| translation initiation factor IF3 putative [Albugo laibachii Nc14] Length = 240 Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 11/136 (8%) Query: 1 MQMAQEANLDLVEIDSSVT---PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 ++MA+ A +DLV++ P++C++LD K + ++K +A K KE+ + Sbjct: 105 LEMAEAAKMDLVQVAEPKNGMGPTICRLLDANKRMFELKKGVKKAAKD------KEITLT 158 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 P I HDL VK++ I FL+ G V+++ ++ E + + E + I E+ E+ R + Sbjct: 159 PKIATHDLDVKVRRIKSFLKKGSTVRVTARWHRYENL-LEKAEEKMGEITEKLLEVGRTN 217 Query: 118 CEPKFEGRQMIMILSS 133 + E + ++ Sbjct: 218 SSKQVE-NTLKLVFVP 232 >gi|301110044|ref|XP_002904102.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262096228|gb|EEY54280.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 146 Score = 93.5 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 9/115 (7%) Query: 1 MQMAQEANLDLVEIDSSVT-PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 +Q A+ +DLV++ P+VC++ D +K + ++K +A K+QK KEV + Sbjct: 11 IQEARSQGVDLVQVSPVGKLPAVCRLFDSKKRFFELKKANKKASKQQKPKPDKEVVVGAK 70 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 I +DL +K++ + FL G KVK+++KF H L + E+ G I Sbjct: 71 IAPNDLNMKVEQLKRFLNKGHKVKLTIKF-----AH---AYHLKTQCLEQLGNIG 117 >gi|218509052|ref|ZP_03506930.1| translation initiation factor IF-3 [Rhizobium etli Brasil 5] Length = 122 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/57 (63%), Positives = 43/57 (75%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 ++MA+EA LDLVEI + P VCKILDL KL+Y QK A EARKKQK +KE+KMR Sbjct: 66 LRMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMR 122 >gi|311086441|gb|ADP66522.1| translation initiation factor IF-3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087589|gb|ADP67668.1| translation initiation factor IF-3 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 69 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQM 127 ++ + FL DG K KI+++FRGRE+ HQ +G ++L+ +K E++ ++ P K EGRQM Sbjct: 1 MRNLIRFLEDGDKAKITLRFRGREMAHQKIGVDVLNRVKNDLIELATVEYFPSKIEGRQM 60 Query: 128 IMILSSKC 135 IMIL+ K Sbjct: 61 IMILAPKK 68 >gi|158338503|ref|YP_001519680.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] gi|158308744|gb|ABW30361.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017] Length = 104 Score = 90.8 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 6/108 (5%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D K RY + ++ +KEVK+RP + D V++ +L G VK Sbjct: 1 MDFGKYRYEQ---KKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQ 57 Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 V+ RGRE H+D +LL + + ++ + F+ R +I+ L Sbjct: 58 VRLRGREHQHRDRATDLLQRVIDDLSKVGEVQ---IFDRRALIVQLIP 102 >gi|254415538|ref|ZP_05029298.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196177719|gb|EDX72723.1| translation initiation factor IF-3, C-terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 113 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++A+LDLV + V K+LD K +Y +K ++ K +KEVK+RP + Sbjct: 19 LQVAKDASLDLVVVSQRKDAPVAKVLDYGKHQYQQKKRQRQSSKP----TLKEVKLRPNV 74 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLG 99 D +++K +L G VK V+ RGRE H+D Sbjct: 75 GDSDYGLRIKRALNWLDKGNLVKFQVRLRGREHQHRDRA 113 >gi|144575193|gb|AAZ44013.2| translation initiation factor IF-3 [Mycoplasma synoviae 53] Length = 139 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 52/92 (56%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 +ILD K +Y +KN E ++KQ + KE+++ P I DL+ K K +L G ++ Sbjct: 2 VRILDYGKFKYISKKNQKEKKEKQSNVQNKEIRLTPFIGKADLETKSKKAREYLLKGDRI 61 Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 K+S+K RGREI ++LG E L + +I Sbjct: 62 KVSLKLRGREIARKELGFETLDKFYQTLVDIC 93 >gi|296454373|ref|YP_003661516.1| initiation factor 3 [Bifidobacterium longum subsp. longum JDM301] gi|296183804|gb|ADH00686.1| initiation factor 3 [Bifidobacterium longum subsp. longum JDM301] Length = 131 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 72 IDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 + FL G KVK+++ RGREI G ELL + + E ++ +PK EGR +IM L Sbjct: 1 MTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKPKQEGRNIIMTL 60 Query: 132 SSK 134 + K Sbjct: 61 APK 63 >gi|226312950|ref|YP_002772844.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] gi|226095898|dbj|BAH44340.1| putative translation initiation factor IF-3 [Brevibacillus brevis NBRC 100599] Length = 161 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +Q+A++ +DLV + + +P C++++ + + + + RK +K IKE+++ I Sbjct: 31 LQLAKDQGVDLVCLSLASSPPPCQLVNRTNYKEQVIQENAKNRKAEKGVKIKEIRLSAYI 90 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K + + L G V+++VK +E + L+ + + + D Sbjct: 91 EDHDYDTKKRQAERILSSGDAVQLTVKLEKKE---SQEAKRLIEQLIKDLAHCGKQDKGI 147 Query: 121 KFEGRQMIMILSS 133 + G+Q++ L Sbjct: 148 QVSGKQVVANLLP 160 >gi|321309614|ref|YP_004191943.1| translation initiation factor IF-3 [Mycoplasma haemofelis str. Langford 1] gi|319801458|emb|CBY92104.1| translation initiation factor IF-3 [Mycoplasma haemofelis str. Langford 1] Length = 175 Score = 88.5 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A++ LDLV I+ + P V KILD K Y + K+ +K + ++P I Sbjct: 44 LALAKQRELDLVLINQN--PGVVKILDYGKYIYEL---KKNKGGKKNVVKVKSITVKPNI 98 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 HD++ K K + + G KV+ VK GR DL E+ + Sbjct: 99 SSHDIEWKAKQAIDWFKSGDKVQFVVKAPGRMADRVDLVNEVYDQFSVLVESHGK 153 >gi|302790928|ref|XP_002977231.1| hypothetical protein SELMODRAFT_417117 [Selaginella moellendorffii] gi|300155207|gb|EFJ21840.1| hypothetical protein SELMODRAFT_417117 [Selaginella moellendorffii] Length = 270 Score = 88.5 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 72/144 (50%), Gaps = 11/144 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK----KQKSTGIKEVKM 56 + +A++ LDLVE+D S P VCK++D +K +Y + E +K ++ + +KE+++ Sbjct: 98 LGLAEKQGLDLVEVDPSKEPVVCKLMDYKKEKYKEKVREKERKKTNLESRRLSDLKELQV 157 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-------LGRELLSNIKER 109 I+ DL++K ++ G ++K VK + + + +L+ + E Sbjct: 158 TSKIEERDLEMKADMASKLIQRGHRLKFVVKLPNKPVKDDEGPVRSDPKALKLIDRLIEL 217 Query: 110 FGEISRIDCEPKFEGRQMIMILSS 133 ++S+++ P+ E + IL Sbjct: 218 LKDVSKLEQGPQSERHRAWAILRP 241 >gi|159155471|gb|AAI54974.1| LOC100127256 protein [Xenopus laevis] Length = 246 Score = 87.3 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 8/138 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK---STGIKEVKMR 57 +++ E L LV I + P + K+L K + Q E +K + IKE+ Sbjct: 79 IRIMDEKGLKLVPIKENADPPIYKLLT-GKQIHEEQLKLREKQKLSSSHGTVQIKELSFS 137 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL +K K I ++ V+ISV+ +G D E+L+ I + E + Sbjct: 138 AGIAKHDLDIKTKQILHWIEKKHHVRISVQ-KGSSAEGNDK-LEVLNQITDAVSEHATCV 195 Query: 118 CEPKF--EGRQMIMILSS 133 +PK EGR + +L Sbjct: 196 VKPKLIKEGRSAVCVLRP 213 >gi|167948463|ref|ZP_02535537.1| translation initiation factor IF-3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 107 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 46/75 (61%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLH 63 A EA++DLVEI + P VC+++D K + ++K A+KKQK +KEVK RP Sbjct: 20 ADEADMDLVEIVPNAEPPVCRVMDYGKFLFDVKKQKQAAKKKQKQVQVKEVKFRPGTGAG 79 Query: 64 DLQVKLKAIDGFLRD 78 D QVKL+ + FL D Sbjct: 80 DYQVKLRNLVRFLSD 94 >gi|251794459|ref|YP_003009190.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] gi|247542085|gb|ACS99103.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2] Length = 162 Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 +QMA++ +DLV +P CK++ + + + K + +KE+++ I Sbjct: 32 LQMAKQLKVDLVCESLMSSPPPCKLIVRGGAKQQASQQKRAEKVKSEPAKVKELRLSVDI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL+ L G V++ ++ +G+E +ELL + Sbjct: 92 EQHDYDTKLRQAVKLLESGNAVQLVIRIQGKEGAR---AKELLEQLLADLKPYGAKQTGI 148 Query: 121 KFEGRQMIMILSS 133 + G+Q + ++ Sbjct: 149 QLSGKQAAVQVNP 161 >gi|148233052|ref|NP_001090628.1| mitochondrial translational initiation factor 3 [Xenopus (Silurana) tropicalis] gi|110645372|gb|AAI18769.1| hypothetical protein MGC145704 [Xenopus (Silurana) tropicalis] gi|114107611|gb|AAI22946.1| MGC145669 protein [Xenopus (Silurana) tropicalis] Length = 258 Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 8/138 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK---STGIKEVKMR 57 +++ E L LV I + P + K+L K + Q E +K IKE+ Sbjct: 91 IRIMDEQGLKLVPIRENADPPIYKLLT-GKQIHEEQLKIREKQKLSSGHGPVQIKELSFS 149 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL +K K I ++ V+ISV+ +G D E+L+ I E E + Sbjct: 150 ACIAKHDLDIKTKQIIHWIEKKHHVRISVQ-KGSPAGGNDK-LEVLNQIAENMSEHATCV 207 Query: 118 CEPKF--EGRQMIMILSS 133 +PK EGR + +L Sbjct: 208 VKPKLVKEGRSAVCVLRP 225 >gi|325989680|ref|YP_004249379.1| translation initiation factor IF-3 [Mycoplasma suis KI3806] gi|323574765|emb|CBZ40421.1| Translation initiation factor IF-3 [Mycoplasma suis] Length = 156 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 3/115 (2%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRPVID 61 A+E LDL+ ++SS++P V K+++ +K ++ KK+K+ +K + ++ ID Sbjct: 5 AEEKGLDLMLVNSSLSPHVVKLVNYESFIQEKKKQEYQSSKKEKNKGNKMKSIALKLKID 64 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISR 115 HDL+ K+K + +L G +V++ +K + + LL IKE + + Sbjct: 65 SHDLEWKIKKMKEWLEAGDRVQLIIKTPFETANFKSPIAESLLGRIKEIIQDAGK 119 >gi|91229884|ref|ZP_01262955.1| translation initiation factor 3 [Vibrio alginolyticus 12G01] gi|91187353|gb|EAS73720.1| translation initiation factor 3 [Vibrio alginolyticus 12G01] Length = 66 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 40/66 (60%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 +DLVEI + P VC+++D K + K A E +KKQK IKEVK RP D+ D QVK Sbjct: 1 MDLVEISPNAEPPVCRVMDYGKFLFEKSKTAKEQKKKQKQVQIKEVKFRPGTDIGDYQVK 60 Query: 69 LKAIDG 74 L+ + Sbjct: 61 LRNLTR 66 >gi|309801411|ref|ZP_07695538.1| translation initiation factor IF-3, C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308221926|gb|EFO78211.1| translation initiation factor IF-3, C-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 120 Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 FL G KVK+++ RGRE G ELL + + E ++ PK EGR +IM L+ Sbjct: 2 RFLNGGDKVKVTIMLRGREQSRPIGGVELLQRLAQEVEEYGTVEFAPKQEGRNIIMTLAP 61 Query: 134 K 134 K Sbjct: 62 K 62 >gi|296815818|ref|XP_002848246.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238841271|gb|EEQ30933.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 245 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 V +S P++CKI++ ++++ + ++ K + IK++++ ID HDLQ +L Sbjct: 118 VRAESEGQPAICKIVNKTDYDKSVKERSRASKTKPTTNQIKQIELNWAIDPHDLQHRLSQ 177 Query: 72 IDGFLRDGCKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQM 127 ++ FL G +V I K R + D + LL+ I+++ EI + +P+ G+ M Sbjct: 178 LETFLGKGKRVSLILTKKRRKRRATPDEAQRLLAAIEDKLFEIGVTEVKPRR-GKIM 233 >gi|223995681|ref|XP_002287514.1| probable mitochondrial translation initiation factor [Thalassiosira pseudonana CCMP1335] gi|220976630|gb|EED94957.1| probable mitochondrial translation initiation factor [Thalassiosira pseudonana CCMP1335] Length = 152 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 7/122 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS------TGIKEV 54 + +A + LDL+E+ P V K +D K Y ++ + K + +KE Sbjct: 8 ISIAHKHGLDLMEVTLKSNPPVIKAVDFDKHIYEQKRKESKLSKDKSKGGAISDKPLKEF 67 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE-LLSNIKERFGEI 113 K R ID HDL+ K + +L G +++++ R R + E L +KE G+ Sbjct: 68 KFRAGIDNHDLERKASNMIKYLDKGHAIRVTLTARQRSLNADAKAIETTLDRVKELVGDK 127 Query: 114 SR 115 + Sbjct: 128 AV 129 >gi|304406166|ref|ZP_07387823.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] gi|304344750|gb|EFM10587.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus YK9] Length = 165 Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + MA+ DLV +P CK++ + + + E R +++ KE+++ I Sbjct: 33 LAMAKRLKADLVCTSLMSSPPPCKLVSRGEAKREQTQQKREERLQEQPAKEKELRLSASI 92 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD K + + L G V + V+ +G++ +ELL + + Sbjct: 93 EEHDYDTKRRQAEKLLASGNPVLLVVRLKGKQEQVP--AKELLERLAADLKPVGSKATGV 150 Query: 121 KFEGRQMIMILSS 133 + G+Q + ++ Sbjct: 151 QVSGKQAAVRINP 163 >gi|255629107|gb|ACU14898.1| unknown [Glycine max] Length = 202 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST----GIKEVKM 56 ++ A+ LDLVE+D + P VCKI+D K Y Q+ E K + +KEV+ Sbjct: 108 LEHAKTLKLDLVEVDKNAKPPVCKIMDFHKQMYRRQEREKERAKSRAEMTLRKDVKEVRF 167 Query: 57 RPVIDLHDLQVKLKAIDGFLRDG 79 + DL+ K I + G Sbjct: 168 SEKTEAKDLKNKADMIKKLMEKG 190 >gi|327299808|ref|XP_003234597.1| translation initiation factor IF-3 [Trichophyton rubrum CBS 118892] gi|326463491|gb|EGD88944.1| translation initiation factor IF-3 [Trichophyton rubrum CBS 118892] Length = 250 Score = 81.9 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNA--VEARKKQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + VCKI+D +++ A E++ K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGSEDQAPVCKIVDKSDYSASLKAKARGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L ++ FL G +V + + + R D + +L+ I+ + EI + +P+ G+ Sbjct: 176 HRLDQLETFLSKGKRVSLILTKKKRKRRATPDEAQRVLAAIENKLFEIGVTEVKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|157833955|pdb|1TIF|A Chain A, Translation Initiation Factor 3 N-Terminal Domain Length = 78 Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 27/44 (61%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK 44 +++A NLDLV + + P VC+I+D K R+ QK EARK Sbjct: 35 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARK 78 >gi|170695921|ref|ZP_02887061.1| initiation factor 3 [Burkholderia graminis C4D1M] gi|170139219|gb|EDT07407.1| initiation factor 3 [Burkholderia graminis C4D1M] Length = 81 Score = 80.4 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 31/51 (60%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIK 52 +M+++ ++DLVEI P VC+++D K +Y+ K EA+ KQK + Sbjct: 21 RMSEQQDVDLVEIAPQAVPPVCRLMDYGKFKYSEAKKQHEAKLKQKIVQSR 71 >gi|229366726|gb|ACQ58343.1| Translation initiation factor IF-3, mitochondrial precursor [Anoplopoma fimbria] Length = 298 Score = 79.6 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 8/137 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK-KQKSTGIKEVKMRPV 59 +++ + L LV + P +++ K + Q E +K K +KE+ Sbjct: 108 IRILDQQGLKLVLLSERKDPPTYRLM-SGKQIHEEQLKLREKQKAKAAPLQVKELTFSSG 166 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKF-RGREIMHQDLGRELLSNIKERFGEISRIDC 118 I HDL K+K ++ +L V+++++ RGR + D E + E + + Sbjct: 167 IGAHDLSTKMKQVESWLEKKNHVRLTLRSGRGRPADNLDTTLEQIVQQMEMM--VGFV-S 223 Query: 119 EPK--FEGRQMIMILSS 133 +PK +G + IL Sbjct: 224 KPKTIRDGHAAMCILRP 240 >gi|297250595|ref|ZP_06934143.1| translation initiation factor IF-3 [Neisseria polysaccharea ATCC 43768] gi|296838508|gb|EFH22446.1| translation initiation factor IF-3 [Neisseria polysaccharea ATCC 43768] Length = 81 Score = 76.9 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 27/42 (64%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK 44 MA+E N+DLVEI + P VCK++D K +Y K EA+K Sbjct: 1 MAEEQNVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKK 42 >gi|329927874|ref|ZP_08281935.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] gi|328938275|gb|EGG34670.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5] Length = 160 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 11/136 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS---TGIKEVKMR 57 + +A+ DLV +P CK++ K K+Q S +KE ++ Sbjct: 32 LALAKRHKADLVCTSLFSSPPPCKLVSRG-----QAKQEAVKAKQQVSGGLIKVKEFRLS 86 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I+ HD KL + L G V+ ++ +G+E + R+LL + + E+ + + Sbjct: 87 VHIEDHDYDTKLSQMHKLLAAGKAVQPVIRIQGKEG---EAARKLLERLVQDLAEVGKKE 143 Query: 118 CEPKFEGRQMIMILSS 133 + G+Q + L Sbjct: 144 TGIQVSGKQAAVKLLP 159 >gi|326473659|gb|EGD97668.1| translation initiation factor IF3 [Trichophyton tonsurans CBS 112818] Length = 250 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAV--EARKKQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + VCK++ + + + E++ K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGSEDQAPVCKVVAKSEYIASAKAKGKGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L ++ FL G +V + + + R D + +L+ I+ + EI + +P+ G+ Sbjct: 176 HRLDQLETFLSKGKRVSLILTKKKRKRRATPDEAQRVLAAIENKLFEIGVTEAKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|315052920|ref|XP_003175834.1| hypothetical protein MGYG_03354 [Arthroderma gypseum CBS 118893] gi|311341149|gb|EFR00352.1| hypothetical protein MGYG_03354 [Arthroderma gypseum CBS 118893] Length = 250 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAV--EARKKQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + +CK+++ + + + A E++ K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGTEDQAPICKVVEKSEYIASTKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L+ ++ FL G +V + + + R D + LL+ I+ + EI + +P+ G+ Sbjct: 176 HRLEQLETFLSKGKRVSLILTKKKRKRRATPDEAQRLLAAIENKLFEIGVTEVKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|312884193|ref|ZP_07743905.1| translation initiation factor 3 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368241|gb|EFP95781.1| translation initiation factor 3 [Vibrio caribbenthicus ATCC BAA-2122] Length = 55 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 40/54 (74%), Gaps = 1/54 (1%) Query: 83 KISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP-KFEGRQMIMILSSKC 135 K++++FRGRE+ HQD+G ++L +KE E++ ++ P K EGRQMIM+L+ K Sbjct: 1 KVTIRFRGREMAHQDIGVDVLHRLKEDTAELAVVESFPKKIEGRQMIMVLAPKK 54 >gi|326480787|gb|EGE04797.1| translation initiation factor IF3 [Trichophyton equinum CBS 127.97] Length = 250 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAV--EARKKQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + VCK++ + + + E++ K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGSEDQAPVCKVVAKSEYIASAKAKGKGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L ++ FL G +V + + + R D + +L+ I+ + EI + +P+ G+ Sbjct: 176 HRLDQLETFLSKGKRVSLILTKKKRKRRATPDEAQRVLAAIENKLFEIGVTEVKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|261406395|ref|YP_003242636.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] gi|261282858|gb|ACX64829.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10] Length = 160 Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 11/136 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS---TGIKEVKMR 57 + +A+ DLV +P CK++ K K+Q S +KE ++ Sbjct: 32 LALAKRHKADLVCTSLFSSPPPCKLVSRG-----QAKQEAVKAKQQVSGGPIKVKEFRLS 86 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I+ HD KL + L G V+ ++ +G+E + R+LL + + + + + Sbjct: 87 VHIEEHDYDTKLSQVHKLLAAGKAVQPVIRIQGKEG---EAARKLLERLVQDLAGVGKKE 143 Query: 118 CEPKFEGRQMIMILSS 133 + G+Q + L Sbjct: 144 TGIQVSGKQAAVKLLP 159 >gi|315646792|ref|ZP_07899907.1| translation initiation factor IF-3 [Paenibacillus vortex V453] gi|315277722|gb|EFU41046.1| translation initiation factor IF-3 [Paenibacillus vortex V453] Length = 162 Score = 75.0 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 3/133 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 + +A+ DLV +P CK++ + + K + +KE ++ I Sbjct: 32 LALAKSHKADLVCTSLFSSPPPCKLVSRGQAKQVAAKEKKGNNETSGPIKVKEFRLSVHI 91 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEP 120 + HD KL + L V+ ++ +G+E + R+LL + E+ + + Sbjct: 92 EEHDYDTKLSQMHKLLAADKAVQPVIRIQGKEG---EAARKLLERLVHDLAEVGKKETGI 148 Query: 121 KFEGRQMIMILSS 133 + G+ + L Sbjct: 149 QVSGKLATVKLLP 161 >gi|308068259|ref|YP_003869864.1| translation initiation factor IF-3 [Paenibacillus polymyxa E681] gi|305857538|gb|ADM69326.1| Translation initiation factor IF-3 [Paenibacillus polymyxa E681] Length = 171 Score = 75.0 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 9/124 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR-------KKQKSTGIKE 53 + +A+ +DLV +P C ++ K + QK A ++ K +KE Sbjct: 33 LALARSKGVDLVCTSLMSSPPPCSLVAKGKGKALAQKEAAASKTNVGRAAKNSGKEKVKE 92 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 ++ I+ HD KL+ D LR G V++ VK G + + +L + E Sbjct: 93 LRFTAHIEEHDYDTKLRQADKHLRSGKPVQLVVKASG--AKEAPVAKAVLERLLVDLKEA 150 Query: 114 SRID 117 + Sbjct: 151 GVKE 154 >gi|167948464|ref|ZP_02535538.1| translation initiation factor IF-3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 51 Score = 74.6 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 33/50 (66%) Query: 86 VKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE H++LG ELL ++ E +++ +P EGRQM+M+L K Sbjct: 1 MRFRGREHAHRELGLELLQRVEADLAEYGQVEQKPAMEGRQMVMVLGPKK 50 >gi|309801415|ref|ZP_07695542.1| translation initiation factor IF-3, N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308221930|gb|EFO78215.1| translation initiation factor IF-3, N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 98 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 26/41 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVE 41 + +A+EANLDLVE+ + P V K++D K +Y + A E Sbjct: 41 LNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKARE 81 >gi|56417284|ref|YP_154358.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] gi|56388516|gb|AAV87103.1| translation initiation factor IF-3 [Anaplasma marginale str. St. Maries] Length = 85 Score = 74.2 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%) Query: 73 DGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ G KVK+S++F GRE+ ++++G +L + ++R + P+ +G M M+ Sbjct: 14 REFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSPRMDGNVMSMVF 72 >gi|327281647|ref|XP_003225558.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like [Anolis carolinensis] Length = 282 Score = 74.2 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 7/130 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS---TGIKEVKMR 57 +++ E L LV + P V +++ + + E +K S KE+ + Sbjct: 114 IRIMDERGLRLVLLSEKADPPVYRLM-SGHQIHEERMKLREKQKANPSNGPVQQKEITLS 172 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K+K I ++ V+++V+ + R L S I + E + Sbjct: 173 TTIAQHDLDTKIKQIQQWIDKKHHVRVTVQQK-RADDEPKHTLALFSQILDAMPEKATYL 231 Query: 118 CEPKF--EGR 125 EP+ EGR Sbjct: 232 SEPRIAKEGR 241 >gi|302496869|ref|XP_003010435.1| translation initiation factor IF3, putative [Arthroderma benhamiae CBS 112371] gi|291173978|gb|EFE29795.1| translation initiation factor IF3, putative [Arthroderma benhamiae CBS 112371] Length = 250 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAVEARK--KQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + VCKI+D + + + A K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGSEDQAPVCKIVDKSEYSASAKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L ++ FL G +V + + + R D + +L+ I+ + EI + +P+ G+ Sbjct: 176 HRLDQLETFLSKGKRVSLILTKKKRKRRATPDEAQRVLAAIESKLFEIGVTEVKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|219130932|ref|XP_002185606.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217402946|gb|EEC42904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 304 Score = 73.9 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 5/136 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 ++ + E + DL+EI V K+ +++ L Y K +KK KE + R I Sbjct: 165 IKKSIELDKDLIEIALDHEIPVVKLANIKVLEYKQSKIL--QKKKSSILPEKEFRFRAGI 222 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGRE-IMHQDLGRELLSNIKERFGEISRIDCE 119 +D+ K+ + L G K + ++ R RE ++ R + + + ++ Sbjct: 223 AENDMTRKVDKMTEALGKGHKCLVQIRCRRRELLVDPQAARTTIQRVLDAVKDVGEPLKA 282 Query: 120 PKF--EGRQMIMILSS 133 P EG + L Sbjct: 283 PTIHPEGTSAQLYLQP 298 >gi|223933237|ref|ZP_03625227.1| initiation factor 3 [Streptococcus suis 89/1591] gi|223898051|gb|EEF64422.1| initiation factor 3 [Streptococcus suis 89/1591] Length = 91 Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 35/59 (59%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 +A AN+DLV I P V KI+D K ++ QK E RKKQ +KEV++ PVID Sbjct: 33 IADSANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVID 91 >gi|118084976|ref|XP_417124.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 277 Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI--KEVKMRP 58 +++ E +L LV + + P V +++ + + + E K T + KE+ Sbjct: 112 LRLMDEHDLKLVLLRENAEPPVYRLMT-GQQIHEEKLKRAEKEKASSKTVLVQKELSFSS 170 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I +DL+ K+K I ++ VK++++ L I E + + Sbjct: 171 AIAKNDLETKIKQITHWIEKKYHVKVTIRQAKDSNTDT---FTLFDQILETMSDKATYLS 227 Query: 119 EPK--FEGRQM 127 +PK EG M Sbjct: 228 KPKAIKEGTSM 238 >gi|302654213|ref|XP_003018915.1| translation initiation factor IF3, putative [Trichophyton verrucosum HKI 0517] gi|291182603|gb|EFE38270.1| translation initiation factor IF3, putative [Trichophyton verrucosum HKI 0517] Length = 250 Score = 72.7 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Query: 11 LVEIDSSVT--PSVCKILDLRKLRYTIQKNAVEARK--KQKSTGIKEVKMRPVIDLHDLQ 66 LV++ + VCKI+D + + + A K + IK++++ ID HDLQ Sbjct: 116 LVQVRAGSEDQAPVCKIVDKSEYSASAKAKAKGKESKPKSTAVQIKQIELNWAIDPHDLQ 175 Query: 67 VKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 +L ++ FL G +V + + + R D + +L+ I+ + EI + +P+ G+ Sbjct: 176 HRLDQLETFLSKGKRVSLILTKKERKRRATPDEAQRVLAAIESKLFEIGVTEVKPRR-GK 234 Query: 126 QM 127 M Sbjct: 235 IM 236 >gi|254995450|ref|ZP_05277640.1| translation initiation factor IF-3 [Anaplasma marginale str. Mississippi] Length = 71 Score = 72.7 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 34/58 (58%) Query: 74 GFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMIL 131 F+ G KVK+S++F GRE+ ++++G +L + ++R + P+ +G M M+ Sbjct: 1 EFIEKGNKVKVSIRFVGRELQYKEVGLGILDRLVNDTEGVARPESSPRMDGNVMSMVF 58 >gi|212538369|ref|XP_002149340.1| translation initiation factor IF3, putative [Penicillium marneffei ATCC 18224] gi|210069082|gb|EEA23173.1| translation initiation factor IF3, putative [Penicillium marneffei ATCC 18224] Length = 243 Score = 72.7 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 6/119 (5%) Query: 11 LVEIDS--SVTPSVCKILDLRKLRYTIQKNAVEAR--KKQKSTGIKEVKMRPVIDLHDLQ 66 LV++D S VCKI+ L + R + R K T K++++ ID HDL Sbjct: 112 LVQLDPGDSSRVPVCKIMSLSEFREEERAKERAVRMAKHAAKTSTKQIELNWSIDPHDLS 171 Query: 67 VKLKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +LK + GF+ G V+I + + R + I D ++L+ ++ E + EG Sbjct: 172 HRLKKLSGFIDKGRTVEIVLTRKRNKRIATADEIKQLMDRLRAAIEE-ANAHQSKSMEG 229 >gi|320591741|gb|EFX04180.1| translation initiation factor [Grosmannia clavigera kw1407] Length = 311 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%) Query: 17 SVTP--SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDG 74 P +CKI+D R + E R+K+ + KE+++ ID HDL+ ++ + Sbjct: 180 KAVPRFPICKIVDRVAERKAEYEKTRELRRKKTLS--KELELNWAIDTHDLEHRMGKLRE 237 Query: 75 FLRDGCKVKISVKF----RGREIMHQDLGRELLSNIKERFGEI-SRIDCEPKFEG 124 FL G +V++S+ +GR Q+ ELL ++E + + +P EG Sbjct: 238 FLERGLRVEVSMMRKGKGKGRRHATQEEAAELLRRVRETVATVPGARETKP-MEG 291 >gi|126327589|ref|XP_001376085.1| PREDICTED: similar to DC38 [Monodelphis domestica] Length = 275 Score = 72.3 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST---GIKEVKMR 57 +++ +E NL LV ++ P V +++ + Q E K Q T +KE+ Sbjct: 102 IRLMEEQNLRLVLRKANADPPVYQLMT-GSQIHEEQLQIREKEKAQSKTGPPQLKELIFS 160 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K+K I ++ +V+I+VK + + +D EL + I + E++ Sbjct: 161 SNIAQHDLNTKIKQIKQWIEKKYQVQITVK-KDKTADPEDNMEELFNKILKTMPELATFT 219 Query: 118 CEPK 121 +PK Sbjct: 220 SKPK 223 >gi|331219120|ref|XP_003322237.1| hypothetical protein PGTG_03774 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301227|gb|EFP77818.1| hypothetical protein PGTG_03774 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 357 Score = 71.9 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 11 LVEIDSSVTPSVCKILD----LRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQ 66 L+E++S P +CKI+ ++K R +++ + R + +KE+++ I+ +DL Sbjct: 225 LIEVNSKTNPPICKIVSREALVQKERTKLKQKKEQQRSNRLENVLKEIQLTWKIERNDLN 284 Query: 67 VKLKAIDGFLRDGCKVKISVK-FRGREIMHQDLGRELLSNIKERF----GEISRIDCEP 120 KLKA KV+I + + + Q+ ELL+ ++E+ GE+ + + E Sbjct: 285 HKLKAAQQSFEKAYKVRIILNPPSRYQQIDQNHKDELLAIVEEQLTGFGGELVKQESEA 343 >gi|257425796|ref|ZP_05602220.1| translation initiation factor IF-3 domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257271490|gb|EEV03636.1| translation initiation factor IF-3 domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] Length = 89 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG 50 ++MA+ +LDLV + + P V +I+D K ++ Q+ K+ K+ Sbjct: 39 LEMAERVDLDLVVVAPNAKPPVARIMDYGKFKFEQQEKRKRNEKETKNYQ 88 >gi|194295360|gb|ACF40749.1| InfC [Listeria monocytogenes] gi|194295363|gb|ACF40751.1| InfC [Listeria monocytogenes] Length = 71 Score = 70.4 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 25/37 (67%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQK 37 +Q+A++ANLDLV + + P V +I+D K R+ QK Sbjct: 35 LQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQK 71 >gi|124512278|ref|XP_001349272.1| translation initiation factor IF-3, putative [Plasmodium falciparum 3D7] gi|23499041|emb|CAD51121.1| translation initiation factor IF-3, putative [Plasmodium falciparum 3D7] Length = 165 Score = 70.4 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 43/91 (47%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 RY +K + + K ++ +K++++ P I ++DL +K+ + FL +VK + Sbjct: 52 GHERYIQEKKLKQLKHKMENKSVKQLRITPRIGMNDLLIKINSAKQFLLKRHRVKFILTL 111 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRIDCE 119 +GRE + + + + S I E + Sbjct: 112 KGREYTNVENVKRIFSKISEELKSYGNSETM 142 >gi|194040482|ref|XP_001926512.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like [Sus scrofa] Length = 277 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV D P ++L + + EA + K T KE+ Sbjct: 106 IRLMAERDLRLVRRDPGAEPPQYQLLT-GAQIHQERLRLREAGRAEPKPGPTLTKELTFS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRI 116 I HDL K K I ++ KV+I++K +GR + EL + I + I+ Sbjct: 165 SNIGQHDLDTKSKQIQQWIEKKYKVQITIK-KGRNAEEPENKMEELCNQILQTMHGIATF 223 Query: 117 DCEPKFE--GRQMIMILSS 133 P+ G+ M+ +L Sbjct: 224 SSRPQLIRGGKAMMCVLRP 242 >gi|242806790|ref|XP_002484818.1| translation initiation factor IF3, putative [Talaromyces stipitatus ATCC 10500] gi|218715443|gb|EED14865.1| translation initiation factor IF3, putative [Talaromyces stipitatus ATCC 10500] Length = 225 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 6/119 (5%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEAR--KKQKSTGIKEVKMRPVIDLHDLQ 66 LV++D P+VCKI+ L R + AR K T K++++ ID HDL Sbjct: 94 LVQLDPGGPDRPAVCKIMPLADFRDEERAKEKAARLAKHSAKTSTKQIELNWSIDPHDLS 153 Query: 67 VKLKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +LK + GF+ G V+I + K RG+ + D + L+ ++ E + +P +G Sbjct: 154 HRLKKLSGFIEKGRTVEIILTKKRGKRMATADEIKLLMDKLRTAIEEANAHQIKP-MDG 211 >gi|221053394|ref|XP_002258071.1| hypothetical protein in Plasmodium species [Plasmodium knowlesi strain H] gi|193807904|emb|CAQ38608.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 174 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 44/91 (48%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 + RY +K + + K ++ +K++++ P I +DL +K+ + FL +VK + Sbjct: 52 GRERYMQEKKMKQLKLKAENKVVKQLRITPRIGANDLLIKINSAKQFLLRRHRVKFILTL 111 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRIDCE 119 +GRE + + +++ + I E + Sbjct: 112 KGREYTNVENVKKIFAKISEELKSYGNSETM 142 >gi|326914252|ref|XP_003203440.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like [Meleagris gallopavo] Length = 214 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E NL LV + + P V +++ + + + E K K + + E+ Sbjct: 65 LRLMDEHNLKLVLLRENAEPPVYRLMT-GQQIHEEKLKRAEKEKASLKTGTCIVNELSFS 123 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I +DL+ K K I ++ VK++++ +GR+ + D+ L I E + + Sbjct: 124 SAIAKNDLETKTKQITHWIEKKYHVKVTIR-QGRD-SNTDM-FMLFDQILEAMSDKATYL 180 Query: 118 CEPK--FEGRQM 127 +PK EG M Sbjct: 181 SKPKAIKEGTSM 192 >gi|76576277|gb|ABA53851.1| IF3 [Leptospira biflexa serovar Patoc] Length = 68 Score = 69.6 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 38/58 (65%) Query: 76 LRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 ++ G KVK++++FRGRE++H ++G +++ E E + + P +G+ ++++++ Sbjct: 4 MQKGDKVKVTLRFRGREMVHSEIGMNIVNRFVEDLKEHASPEKMPVHDGKTIVVVMNP 61 >gi|311266045|ref|XP_003130940.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like [Sus scrofa] Length = 277 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV D P ++L + + EA + K T KE+ Sbjct: 106 IRLMAERDLRLVRRDPGAEPPQYQLLT-GAQIHQERLRLREAGRAEPKPGPTLTKELTFS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRI 116 I HDL K K I ++ KV+I++K +GR + EL + I + I+ Sbjct: 165 SNIGQHDLDTKSKQIQQWIEKKYKVQITIK-KGRNAEEPENKMEELCNQILQTMPGIATF 223 Query: 117 DCEPKFE--GRQMIMILSS 133 P+ G+ M+ +L Sbjct: 224 SSRPQLIRGGKAMMCVLRP 242 >gi|115670852|ref|XP_001197675.1| PREDICTED: similar to 2810012L14Rik protein [Strongylocentrotus purpuratus] gi|115930580|ref|XP_001195675.1| PREDICTED: similar to 2810012L14Rik protein [Strongylocentrotus purpuratus] Length = 319 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Query: 16 SSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDG 74 P + K++ ++L K +A+KK T +KE+K I HD+ V+ + + Sbjct: 173 PHAKPWPIYKLMTGQELHEEQVKRNEKAKKKTSPTQLKEIKASWNIGQHDIDVRQRQLQN 232 Query: 75 FLRDGC---KVKISVK-FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMI 128 + D +++V +G E + Q+ +++ + + ++ P+ G+ + Sbjct: 233 WFSDKNANIHARVTVTGGKGTETVLQEKQMAVVNQLMHGLEDRLTLNGPPQMVGKNLN 290 >gi|196015036|ref|XP_002117376.1| hypothetical protein TRIADDRAFT_61382 [Trichoplax adhaerens] gi|190580129|gb|EDV20215.1| hypothetical protein TRIADDRAFT_61382 [Trichoplax adhaerens] Length = 156 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Query: 1 MQMAQEANLDLVEIDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + +A+ LVE+ P VC+++ K Y + E K KE +++ Sbjct: 22 LSIAESKGFKLVEVSPQAKPFPVCRLI-SGKQLYLDKNKRKERSK--IEIMEKEYRIKHN 78 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 I HDL+ ++ ID +L ++K+ + ++ Sbjct: 79 ISQHDLRYRINQIDKYLDRNYRIKLVILYK 108 >gi|326668271|ref|XP_003198773.1| PREDICTED: translation initiation factor IF-3, mitochondrial [Danio rerio] gi|122890858|emb|CAM14174.1| novel protein [Danio rerio] Length = 280 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-STGIKEVKMRPV 59 +++ + +L LV ++ S P V K++ K + Q E +K +K KE+ Sbjct: 111 IRLLDQTDLKLVAVNDSRDPPVYKLM-KGKEIHEEQLKLREKQKDKKGVVQSKELNFSSD 169 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVK 87 I LHDL KL+ I +L VK++++ Sbjct: 170 ISLHDLDNKLRQIVSWLEKNNHVKLTIR 197 >gi|207110661|ref|ZP_03244823.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_CA4C1] Length = 91 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + I +D+ K+K F+ VK V +GRE + G ++L ++ +++ Sbjct: 22 LSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLAN 81 Query: 116 IDCEPKFEGR 125 + EPK EGR Sbjct: 82 PEKEPKTEGR 91 >gi|311086440|gb|ADP66521.1| translation initiation factor IF-3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087588|gb|ADP67667.1| translation initiation factor IF-3 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 42 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 9 LDLVEIDSSVTPSVCKILDLRKLRYT 34 +DLVEI + P VC+I+D K Y Sbjct: 1 MDLVEISPNAEPPVCRIMDYGKFLYE 26 >gi|68074933|ref|XP_679383.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500119|emb|CAH97982.1| conserved hypothetical protein [Plasmodium berghei] Length = 162 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 43/91 (47%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 RY +K + + K ++ +K++++ P I +DL +K+ + FL +VK + Sbjct: 53 GYERYIQEKKMKQLKMKSENKTVKQLRITPRIGANDLLIKINSAKQFLIGRYRVKFILTL 112 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRIDCE 119 +GRE + + +++ + I E + Sbjct: 113 KGREYTNIENVKKIFNKISEELKPYGNSETM 143 >gi|322712692|gb|EFZ04265.1| translation initiation factor IF-3 [Metarhizium anisopliae ARSEF 23] Length = 278 Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 16 SSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-STGIKEVKMRPVIDLHDLQVKLKAIDG 74 +VCKI++ ++ Y QK E +K KE+++ I HDL K++ + Sbjct: 155 PGAQWAVCKIVN-KRDEYERQKQLKEKKKAGVGKPKTKELELTWAIGEHDLATKMRQMGQ 213 Query: 75 FLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCE 119 FL G KV++ V + +G + + ++ I++ ++ + + Sbjct: 214 FLGKGMKVEVLVARKKGGKQVDGKEAEGVVRRIRDEVDKVGGREGK 259 >gi|70995658|ref|XP_752584.1| translation initiation factor IF3 [Aspergillus fumigatus Af293] gi|66850219|gb|EAL90546.1| translation initiation factor IF3, putative [Aspergillus fumigatus Af293] gi|159131339|gb|EDP56452.1| translation initiation factor IF3, putative [Aspergillus fumigatus A1163] Length = 338 Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 11 LVEIDSS--VTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LV++ + P +CKI++ K+ + A T +K++++ ID HDL + Sbjct: 210 LVQVSPALPGRPPICKIMN--KMAMREHERAKAKAAHATKTAVKQIELNWAIDSHDLAHR 267 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G +V+I + + +G+ + + ++ ++ + E + + +P EG Sbjct: 268 LKQLTNFLEKGRRVEIILTRKKGKRAPTVEEIKNVMDSVLQATKEANAMQIKP-MEG 323 >gi|225559612|gb|EEH07894.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 261 Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + + A K S +K+V++ ID HDL + Sbjct: 130 LLQVAPETAERPAICKI--TSKGQLQQKLQAKSKAPKDPSHSLKQVELNWGIDGHDLTHR 187 Query: 69 LKAIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 188 MKMVESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|240279351|gb|EER42856.1| translation initiation factor IF3 [Ajellomyces capsulatus H143] gi|325089616|gb|EGC42926.1| translation initiation factor IF3 [Ajellomyces capsulatus H88] Length = 261 Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + + A K S +K+V++ ID HDL + Sbjct: 130 LLQVAPETAERPAICKI--TSKGQLQQKLQAKSKAPKDPSHSLKQVELNWGIDGHDLTHR 187 Query: 69 LKAIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 188 MKMVESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|154281071|ref|XP_001541348.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411527|gb|EDN06915.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 261 Score = 67.7 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + + A K S +K+V++ ID HDL + Sbjct: 130 LLQVAPETAERPAICKI--TSKGQLQQKLQAKSKAPKDPSHSLKQVELNWGIDGHDLTHR 187 Query: 69 LKAIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ + G KV+ + R +++ + REL+ IKE+ E+ ++ + K EG Sbjct: 188 MKMVESYFEKGKKVEFILLQKDKRKKKLPAPEKARELVKTIKEQIAEMGAVETK-KMEG 245 >gi|5725433|emb|CAB52442.1| putative protein [Arabidopsis thaliana] gi|7269970|emb|CAB79787.1| putative protein [Arabidopsis thaliana] Length = 170 Score = 67.3 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 20/33 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRY 33 ++ A++A LDLV + P V +++D K RY Sbjct: 115 VRRAEDAELDLVILSPDADPPVVRMMDYSKYRY 147 >gi|310641047|ref|YP_003945805.1| translation initiation factor if-3 [Paenibacillus polymyxa SC2] gi|309245997|gb|ADO55564.1| Putative translation initiation factor IF-3 [Paenibacillus polymyxa SC2] Length = 171 Score = 67.3 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 9/124 (7%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVE-------ARKKQKSTGIKE 53 + MA+ +DLV +P C ++ K + QK A A +KE Sbjct: 33 LAMARSKGVDLVCTSLMSSPPPCSLVAKGKGKALAQKKAAASKTNNGRAAGNSGKEKVKE 92 Query: 54 VKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 ++ I+ HD KL+ D LR G V++ VK G + + +L + E+ Sbjct: 93 LRFTAHIEDHDYDTKLRQADKQLRSGKPVQLVVKASG--AKESPVAKAVLERLLGDLKEV 150 Query: 114 SRID 117 + Sbjct: 151 GVKE 154 >gi|295669796|ref|XP_002795446.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285380|gb|EEH40946.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 265 Score = 67.3 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++C+I K + A K + +K+V++ ID HDL + Sbjct: 134 LLQVAPETAERPAICRI--TSKGLLQQKLQAKLKTPKDPNHALKQVELNWGIDGHDLSHR 191 Query: 69 LKAIDGFLRDGCKVKISVKFRGRE---IMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ ++ G KV+ + + R + + REL+ IKE+ E+ ++ + K EG Sbjct: 192 MKMVETYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 249 >gi|225682868|gb|EEH21152.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 270 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + A K + +K+V++ ID HDL + Sbjct: 139 LLQVAPETAERPAICKI--TSKGLLQQKLQAKSKTPKDPNHALKQVELNWGIDGHDLSHR 196 Query: 69 LKAIDGFLRDGCKVKISVKFRGRE---IMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K + ++ G KV+ + + R + + REL+ IKE+ E+ ++ + K EG Sbjct: 197 MKMVKTYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 254 >gi|226290316|gb|EEH45800.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 270 Score = 66.9 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + A K + +K+V++ ID HDL + Sbjct: 139 LLQVAPETAERPAICKI--TSKGLLQQKLQAKSKTPKDPNHALKQVELNWGIDGHDLSHR 196 Query: 69 LKAIDGFLRDGCKVKISVKFRGRE---IMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ ++ G KV+ + + R + + REL+ IKE+ E+ ++ + K EG Sbjct: 197 MKMVETYIEKGKKVEFILLQKDRRKKKLPTPEKARELVKTIKEQLAEMGAVETK-KMEG 254 >gi|330927711|ref|XP_003301970.1| hypothetical protein PTT_13628 [Pyrenophora teres f. teres 0-1] gi|311322927|gb|EFQ89939.1| hypothetical protein PTT_13628 [Pyrenophora teres f. teres 0-1] Length = 286 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 15/128 (11%) Query: 11 LVEIDSSVT----------PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 LVE+ P C+I+ +LR Q+ RK++K K V++ I Sbjct: 117 LVEVAPGKVDELDRPDPNHPPTCRIMTKIELREQHQRKLELIRKQEKGDSTKTVELNWAI 176 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR----EIMHQDLGRELLSNIKERFGEISRI 116 DL +L+ + FL+ G KV++++K GR + + +L +++ E + Sbjct: 177 AQGDLGHRLERVRKFLKQGRKVEVTLKAEGRKGSIKKATPEEAEAVLQAVRDVVAE-CKG 235 Query: 117 DCEPKFEG 124 E K EG Sbjct: 236 ASEMKSEG 243 >gi|156401073|ref|XP_001639116.1| predicted protein [Nematostella vectensis] gi|156226242|gb|EDO47053.1| predicted protein [Nematostella vectensis] Length = 284 Score = 66.5 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 1 MQMAQEANLDLVEIDSSV--TPSVCKILDLR-KLRYTIQKNAVEARKKQKSTGIKEVKMR 57 +Q A++ L+LVE+ + +VC++ K Y +K + + K +KE+ + Sbjct: 136 LQAAKDKQLELVELQNQKGTRAAVCRM--YSRKTLYDAEKKHKHSPQGNK---VKELTIT 190 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I DLQ K K I GFL G VK+S+ + + + E++ + + E+ +D Sbjct: 191 GHIAPQDLQWKTKKIHGFLEHGFSVKLSISRKPYHKISDEEKLEIVKKVVDGVKEVGVLD 250 Query: 118 CEPKFEG 124 +PK G Sbjct: 251 GQPKSVG 257 >gi|156058452|ref|XP_001595149.1| hypothetical protein SS1G_03237 [Sclerotinia sclerotiorum 1980] gi|154701025|gb|EDO00764.1| hypothetical protein SS1G_03237 [Sclerotinia sclerotiorum 1980 UF-70] Length = 285 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 10/114 (8%) Query: 15 DSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-KEVKMRPVIDLHDLQVKLKAID 73 P + KI+D + A+KK+ + K ++M I +DL +L+ I Sbjct: 112 SDDGEPPIAKIIDKG----EAARQKRLAKKKKNPATVTKTIEMNWAIGKNDLSHRLQRIR 167 Query: 74 GFLRDGCKVKISV--KFRGREIMHQDLGRELLSNIKERFGEI-SRIDCEPKFEG 124 FL G KV++ + K +GR ++ G E++ ++E + + EG Sbjct: 168 EFLEKGNKVEVVLAEKRKGRRASGEEAG-EVIGKVREFVEGVEGARESR-GMEG 219 >gi|261187792|ref|XP_002620314.1| translation initiation factor [Ajellomyces dermatitidis SLH14081] gi|239593527|gb|EEQ76108.1| translation initiation factor [Ajellomyces dermatitidis SLH14081] Length = 266 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + A K S +K+V++ ID HDL + Sbjct: 135 LLQVAPETAERPAICKI--TSKGVLQQKLQAKSKAPKDPSRALKQVELNWGIDGHDLSHR 192 Query: 69 LKAIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ + G KV+ + R + + D REL+ +KE+ E+ ++ + K EG Sbjct: 193 MKMVESYFEKGKKVEFILLQKDKRKKTLPTPDKARELVKTVKEQIAEMGAVETK-KMEG 250 >gi|153870649|ref|ZP_02000005.1| Initiation factor 3 [Beggiatoa sp. PS] gi|152072889|gb|EDN69999.1| Initiation factor 3 [Beggiatoa sp. PS] Length = 52 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 20/33 (60%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRY 33 ++ A E LDLVEI TP VC+I+D K + Sbjct: 20 LEKAHEVELDLVEIVPHATPPVCRIMDYGKFLF 52 >gi|302896110|ref|XP_003046935.1| hypothetical protein NECHADRAFT_62572 [Nectria haematococca mpVI 77-13-4] gi|256727863|gb|EEU41222.1| hypothetical protein NECHADRAFT_62572 [Nectria haematococca mpVI 77-13-4] Length = 267 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Query: 22 VCKILDLRKLRYTI--QKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 VCK+++ +K Y +K KQ + KE+++ I HDL K++ ++ FL G Sbjct: 148 VCKVVN-KKEEYERMREKKERARVSKQTTPKNKELELSWGIGEHDLSTKVRQLEQFLSKG 206 Query: 80 CKVKISVKFRGREIMHQDL--GRELLSNIKERFGEISRIDCEP 120 K+++ + ++ + D ++L+ IK+ E+ + + Sbjct: 207 MKIEVILGYKKKSQKRVDEAAAADVLAKIKKGIEEVGAREYKA 249 >gi|239613318|gb|EEQ90305.1| translation initiation factor [Ajellomyces dermatitidis ER-3] gi|327351813|gb|EGE80670.1| translation initiation factor [Ajellomyces dermatitidis ATCC 18188] Length = 266 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P++CKI K + A K S +K+V++ ID HDL + Sbjct: 135 LLQVAPETAERPAICKI--TSKGVLQQKLQAKSKAPKDPSRALKQVELNWGIDGHDLSHR 192 Query: 69 LKAIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +K ++ + G KV+ + R + + D REL+ +KE+ E+ ++ + K EG Sbjct: 193 MKMVESYFEKGKKVEFILLQKDKRKKTLPTPDKARELVKTVKEQIAEMGAVETK-KMEG 250 >gi|116334993|ref|YP_802488.1| translation initiation factor IF-3 [Candidatus Carsonella ruddii PV] gi|116235274|dbj|BAF35122.1| translation initiation factor IF-3 [Candidatus Carsonella ruddii PV] Length = 174 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 48/84 (57%) Query: 50 GIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER 109 IKE++++ ID D ++K+K + FL +G +KI++ F+GREI++++ G EL+ ++ Sbjct: 73 KIKEIRIKINIDTQDFKLKIKKTNCFLLEGYSIKITIIFKGREIIYKEKGIELILRLQNE 132 Query: 110 FGEISRIDCEPKFEGRQMIMILSS 133 + + + +G+ + Sbjct: 133 IKGVYFKFSDIELDGKHLYSYFIP 156 >gi|207111306|ref|ZP_03245468.1| translation initiation factor IF-3 [Helicobacter pylori HPKX_438_CA4C1] Length = 55 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 21/33 (63%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRY 33 + +AQ LDLV I +S P VCK++D K RY Sbjct: 23 LNIAQNLGLDLVLISASAKPPVCKVMDYNKFRY 55 >gi|149599024|ref|XP_001519478.1| PREDICTED: similar to DC38 [Ornithorhynchus anatinus] Length = 415 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 12/139 (8%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKST---GIKEVKMR 57 +++ +E L LV + + P + ++L + + E K + T +KE+ Sbjct: 240 IRLMEERGLRLVLLRPATEPPLYQLLT-GSQIHEERLRLREKSKAKSQTGPTQLKELTFS 298 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRG---REIMHQDLGRELLSNIKERFGEIS 114 I HDL K K I ++ +V+I++K +G +E H G L I + ++ Sbjct: 299 SSITQHDLHTKTKQIQEWIEKKHQVRITIK-KGKFVKEEEHNLEG--LFDEILQAVPILT 355 Query: 115 RIDCEPKF--EGRQMIMIL 131 +P+ +GR +L Sbjct: 356 TFSSKPRVIKDGRVATCVL 374 >gi|171692699|ref|XP_001911274.1| hypothetical protein [Podospora anserina S mat+] gi|170946298|emb|CAP73099.1| unnamed protein product [Podospora anserina S mat+] Length = 295 Score = 64.6 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 21 SVCKIL---DLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLR 77 +C+I+ D +K Y K + + KEV+M + HDL K++ + GFL Sbjct: 134 PICRIILQGDEQKKAYKQMKAEKKKLQNGVKIVTKEVEMNWAMAPHDLATKIRRLKGFLE 193 Query: 78 DGCKVKISVKF---RGREIMHQDLGRELLSNIKERFGEI-SRIDCEPKF 122 G +V++++ + + + + +++ + + E+ + + + Sbjct: 194 KGYRVEVTMMHPKKKSKRKANDEEAKQVFGEVIKVLEEVPGTTEYKSRQ 242 >gi|224170079|ref|XP_002186850.1| PREDICTED: similar to LOC100127256 protein, partial [Taeniopygia guttata] Length = 203 Score = 64.2 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRP 58 +++ + L LV + +V P V +++ + + Q E +K KE+ Sbjct: 107 LRLMDQNGLKLVLLRENVEPPVYRLMT-GQQIHEEQLKRAEKKKASPKPGVVQKELSFSS 165 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 I +DL+ K K I ++ VK++++ Sbjct: 166 AIAKNDLETKTKQIAQWIEKRHHVKVTIR 194 >gi|322693359|gb|EFY85222.1| translation initiation factor IF3, putative [Metarhizium acridum CQMa 102] Length = 278 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 9/107 (8%) Query: 22 VCKILDLRKLRYTIQKNAVEARKKQK-STGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VCKI++ ++ Y QK E +K KE+++ I HDL K++ + FL G Sbjct: 161 VCKIVN-KRDEYERQKQLKEKKKAAVGKPKTKELELTWAIGEHDLATKMRQMGQFLGKGM 219 Query: 81 KVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 KV++ V K +G + + ++ I++ +D EG+ Sbjct: 220 KVEVLVAKKKGGKQVDGKEAEGVVRRIRDE------VDKAGGREGKS 260 >gi|19309397|emb|CAD27296.1| possible translation initiation factor [Aspergillus fumigatus] gi|41581294|emb|CAE47943.1| translation initiation factor 3, putative [Aspergillus fumigatus] Length = 227 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 11 LVEIDSS--VTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LV++ + P +CKI++ K+ + A T +K++++ ID HDL + Sbjct: 99 LVQVSPALPGRPPICKIMN--KMAMREHERAKAKAAHATKTAVKQIELNWAIDSHDLAHR 156 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G +V+I + + +G+ + + ++ ++ + E + + +P EG Sbjct: 157 LKQLTNFLEKGRRVEIILTRKKGKRAPTVEEIKNVMDSVLQATKEANAMQIKP-MEG 212 >gi|189207545|ref|XP_001940106.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976199|gb|EDU42825.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 287 Score = 64.2 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 18/143 (12%) Query: 11 LVEIDSSVT----------PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 LVE++ P C+I+ +LR Q+ RK++K K +++ I Sbjct: 117 LVEVNPGKVDEFDRPDPDHPPTCRIMTKIELREQHQRKLELIRKQEKGDSAKTLEINWAI 176 Query: 61 DLHDLQVKLKAIDGFLRDGCKVKISVKFRGR----EIMHQDLGRELLSNIKERFGEISRI 116 DL +L+ + FL+ G KV++++K GR + + +L +++ E + Sbjct: 177 AKGDLGHRLERVRKFLKQGRKVEVTLKAEGRKGSVKKATPEEAEAVLQAVRDVVAE-CKG 235 Query: 117 DCEPKFEGRQ---MIMILSSKCV 136 E K EG M+++L K + Sbjct: 236 ASEMKSEGTVGGLMLLVLKGKKI 258 >gi|114771884|ref|ZP_01449277.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] gi|114547700|gb|EAU50591.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] Length = 53 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%) Query: 86 VKFRGREIMHQDLGRELLSNIKERF--GEISRIDCEPKFEGRQMIMILSSKC 135 ++FRGRE+ HQ+LG ELL ++ E +I+ PK EGRQM M++ Sbjct: 1 MRFRGREMAHQNLGLELLKRVQGVVVEAEAGKIENHPKSEGRQMTMLIGPNT 52 >gi|114771630|ref|ZP_01449034.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] gi|114547702|gb|EAU50592.1| Translation initiation factor IF-3 [alpha proteobacterium HTCC2255] Length = 38 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 21/31 (67%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLR 32 ++A+ A LDLV I + P VCKI+DL K + Sbjct: 8 ELARIAGLDLVVISPNAQPPVCKIMDLGKFK 38 >gi|257139339|ref|ZP_05587601.1| translation initiation factor IF-3 [Burkholderia thailandensis E264] Length = 45 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 28/43 (65%) Query: 93 IMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 + HQ++G +L ++ E+ +++ PK EGRQMIM+LS K Sbjct: 1 MAHQEIGMRMLERLRGDLDEVGQVEQMPKMEGRQMIMVLSPKK 43 >gi|224043238|ref|XP_002192512.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 173 Score = 61.5 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS--TGIKEVKMRP 58 +++ + L LV + +V P V +++ + + Q E +K KE+ Sbjct: 7 LRLMDQNGLKLVLLRENVEPPVYRLMT-GQQIHEEQLKRAEKKKASPKPGVVQKELSFSS 65 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 I +DL+ K K I ++ VK++++ L I E E + Sbjct: 66 AIAKNDLETKTKQIAQWIEKRHHVKVTIRQAKGSSTDM---FMLFDQILETVSEKATYLS 122 Query: 119 EPKF 122 +PK Sbjct: 123 KPKV 126 >gi|109732238|gb|AAI15686.1| Mtif3 protein [Mus musculus] Length = 276 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ + +L LV+ ++S P +++ + + + E K K T KE+ Sbjct: 103 IRLMNKQDLRLVQRNTSSEPPEYQLMT-GEQIHQERLKLREQEKAKPKTGPTMTKELVFS 161 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ V++++K R ++ E+ + I + +I+ Sbjct: 162 SNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFS 221 Query: 118 CEPK 121 PK Sbjct: 222 SRPK 225 >gi|21313176|ref|NP_083857.1| translation initiation factor IF-3, mitochondrial precursor [Mus musculus] gi|81904524|sp|Q9CZD5|IF3M_MOUSE RecName: Full=Translation initiation factor IF-3, mitochondrial; Short=IF-3(Mt); Short=IF-3Mt; Short=IF3(mt); Short=IF3mt; Flags: Precursor gi|12849675|dbj|BAB28438.1| unnamed protein product [Mus musculus] gi|74151085|dbj|BAE27670.1| unnamed protein product [Mus musculus] gi|145207315|gb|AAH52439.1| Mitochondrial translational initiation factor 3 [Mus musculus] gi|148673876|gb|EDL05823.1| RIKEN cDNA 2810012L14 [Mus musculus] Length = 276 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ + +L LV+ ++S P +++ + + + E K K T KE+ Sbjct: 103 IRLMNKQDLRLVQRNTSSEPPEYQLMT-GEQIHQERLKLREQEKAKPKTGPTMTKELVFS 161 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ V++++K R ++ E+ + I + +I+ Sbjct: 162 SNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFS 221 Query: 118 CEPK 121 PK Sbjct: 222 SRPK 225 >gi|255934048|ref|XP_002558305.1| Pc12g15020 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582924|emb|CAP81129.1| Pc12g15020 [Penicillium chrysogenum Wisconsin 54-1255] Length = 229 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 4/107 (3%) Query: 19 TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRD 78 P VCK+ K + A + +K++++ ID HDL +LK + FL Sbjct: 112 NPPVCKL--YNKKEVRELEKAKAKSARSSKITLKQIELNWAIDAHDLSHRLKQLSTFLEK 169 Query: 79 GCKVKISVKFRGREIM-HQDLGRELLSNIKERFGEISRIDCEPKFEG 124 G +V+I + + R+ D ++++ ++ + E + EG Sbjct: 170 GRRVEILLTTKKRKRKPTVDEIKQVMQSVLDTIREAGGTQTKA-MEG 215 >gi|84000103|ref|NP_001033155.1| translation initiation factor IF-3, mitochondrial precursor [Bos taurus] gi|122142932|sp|Q32KZ1|IF3M_BOVIN RecName: Full=Translation initiation factor IF-3, mitochondrial; Short=IF-3(Mt); Short=IF-3Mt; Short=IF3(mt); Short=IF3mt; Flags: Precursor gi|81674619|gb|AAI09846.1| Mitochondrial translational initiation factor 3 [Bos taurus] gi|296481736|gb|DAA23851.1| translation initiation factor IF-3, mitochondrial precursor [Bos taurus] Length = 273 Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ D+S P ++L + + EA + K T KE+ Sbjct: 101 IRLMAERDLRLVKRDASAEPPQYQLLT-GAQIHQERLRLREAERAAPKPGPTLTKELTFS 159 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ KV+I+VK +D E+ + I + I+ Sbjct: 160 SNIGQHDLDTKSKQIQQWIEKKYKVQITVKKGKSADEPEDKMEEMCNRIVQTMSGIATFS 219 Query: 118 CEPK--FEGRQMIMILSS 133 P+ G+ ++ +L Sbjct: 220 SRPQPIRGGKAVMCVLRP 237 >gi|119174042|ref|XP_001239382.1| hypothetical protein CIMG_09003 [Coccidioides immitis RS] Length = 239 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 8/118 (6%) Query: 11 LVE-IDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LVE I S S+CKI+ + T+++ + K K++++ ID +DL+ + Sbjct: 114 LVELISPSENYGSICKIMT----KRTLREQEYARSRTSKPKPAKQIELNWAIDPNDLENR 169 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCEPKFEGR 125 L ++ F+ G KV++ + + R+ + ++ L+ +KE+ EI I + K +GR Sbjct: 170 LNQMESFIAKGKKVELILTSKARKRKATEPEAQKTLAAVKEKIQEIGAIQSK-KMQGR 226 >gi|258570101|ref|XP_002543854.1| predicted protein [Uncinocarpus reesii 1704] gi|237904124|gb|EEP78525.1| predicted protein [Uncinocarpus reesii 1704] Length = 239 Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 5/104 (4%) Query: 20 PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 P++CK+ + LR A+ K K+V++ ID HDL +L ++ FL G Sbjct: 125 PAICKVFSKKTLRQQQYARTRTAKLK----LAKQVELNWAIDPHDLSKRLDQVESFLAKG 180 Query: 80 CKVKISVKFRGR-EIMHQDLGRELLSNIKERFGEISRIDCEPKF 122 K ++ + + R G ++L+ I E ++ I +PK Sbjct: 181 KKTELVLTPKRRARRATPAEGEKVLAIISEWIEKVGVIQNKPKQ 224 >gi|46130882|ref|XP_389172.1| hypothetical protein FG08996.1 [Gibberella zeae PH-1] Length = 306 Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 14/128 (10%) Query: 16 SSVTPSV----CKILDLRKLRYTIQKNAVEARK--KQKSTGIKEVKMRPVIDLHDLQVKL 69 V CKI++ ++ Y Q+ + R+ KQ S+ +KE++M ID +DL++K Sbjct: 144 PKNNKPVQYALCKIVN-KREEYERQRELQQRRRVSKQTSSKMKEIEMSWAIDENDLKIKT 202 Query: 70 KAIDGFLRDGCKVKISVKFRG---REIMHQDLGRELLSNIKERFGEISRIDCEPKFE--- 123 K + GFL G KV++ + F+ + +D E ++ E+ + +P+ E Sbjct: 203 KQLIGFLSKGWKVEVIMGFKKKGQKRRTSEDTAEEAYVKVQNLVKELGTKEYKPR-EGEV 261 Query: 124 GRQMIMIL 131 GR M L Sbjct: 262 GRTMRFYL 269 >gi|109731906|gb|AAI15685.1| Mitochondrial translational initiation factor 3 [Mus musculus] Length = 276 Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ + +L LV+ ++S P +++ + + + E K K T KE+ Sbjct: 103 IRLMNKQDLRLVQRNTSSEPPEYQLMT-GEQIHQERLKLREQEKAKPKTGPTMTKELVFS 161 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ V++++K R ++ E+ + I + +I+ Sbjct: 162 SNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFS 221 Query: 118 CEPK 121 PK Sbjct: 222 SIPK 225 >gi|320039277|gb|EFW21211.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 239 Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 8/118 (6%) Query: 11 LVE-IDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LVE I S S+CKI+ + T+++ + K K++++ ID +DL+ + Sbjct: 114 LVELISPSENYGSICKIMS----KRTLREQEYARSRTSKPKPAKQIELNWAIDPNDLENR 169 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCEPKFEGR 125 L ++ F+ G KV++ + + R+ + ++ L+ +KE+ EI I + K +GR Sbjct: 170 LNQMESFIAKGKKVELILTSKARKRKATEPEAQKTLAAVKEKIQEIGAIQSK-KMQGR 226 >gi|115491747|ref|XP_001210501.1| hypothetical protein ATEG_00415 [Aspergillus terreus NIH2624] gi|114197361|gb|EAU39061.1| hypothetical protein ATEG_00415 [Aspergillus terreus NIH2624] Length = 231 Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P VCK++ ++ Q+ A T +K++++ ID HDL + Sbjct: 104 LLQVSPGSRDQPPVCKVV--SRVAIKEQEKAKAKATHAAKTAVKQIELNWAIDAHDLAHR 161 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G KV++ + + +G+ + + ++ ++ + E I P EG Sbjct: 162 LKQLTTFLEKGRKVEVVLTRKKGKRAPTVEEVKNVMDSVMQTTREADAIQVRP-MEG 217 >gi|303313991|ref|XP_003067004.1| translation initiation factor IF-3, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106672|gb|EER24859.1| translation initiation factor IF-3, putative [Coccidioides posadasii C735 delta SOWgp] Length = 218 Score = 58.8 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 8/118 (6%) Query: 11 LVE-IDSSVTP-SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 LVE I S S+CKI+ + T+++ + K K++++ ID +DL+ + Sbjct: 93 LVELISPSENYGSICKIMS----KRTLREQEYARSRTSKPKPAKQIELNWAIDPNDLENR 148 Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKERFGEISRIDCEPKFEGR 125 L ++ F+ G KV++ + + R+ + ++ L+ +KE+ EI I + K +GR Sbjct: 149 LNQMESFIAKGKKVELILTSKARKRKATEPEAQKTLAAVKEKIQEIGAIQSK-KMQGR 205 >gi|119495520|ref|XP_001264543.1| translation initiation factor IF3, putative [Neosartorya fischeri NRRL 181] gi|119412705|gb|EAW22646.1| translation initiation factor IF3, putative [Neosartorya fischeri NRRL 181] Length = 227 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ ++ P +CKI++ K+ + A T +K++++ ID HDL + Sbjct: 99 LIQVSPALPDRPPICKIVN--KMAMREHERAKAKAAHATKTAVKQIELNWAIDSHDLAHR 156 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G +V+I + + +G+ + + ++ ++ + E I +P EG Sbjct: 157 LKQLTNFLEKGRRVEIILTRKKGKRAPTVEEIKNVMDSVLQATKEADAIQIKP-MEG 212 >gi|169768786|ref|XP_001818863.1| translation initiation factor IF3 [Aspergillus oryzae RIB40] gi|238498122|ref|XP_002380296.1| translation initiation factor IF3, putative [Aspergillus flavus NRRL3357] gi|83766721|dbj|BAE56861.1| unnamed protein product [Aspergillus oryzae] gi|220693570|gb|EED49915.1| translation initiation factor IF3, putative [Aspergillus flavus NRRL3357] Length = 233 Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 10/117 (8%) Query: 13 EIDSS--VTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG--IKEVKMRPVIDLHDLQVK 68 ++ VCK+++ R I++ K +K++++ ID HDL + Sbjct: 105 QVSPGFRGRAPVCKVVN----RLEIREQERAKAKAAHVNKNSLKQIELNWAIDAHDLSHR 160 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G KV++ + K RG+ + + ++ ++ + + + + +P EG Sbjct: 161 LKQLTNFLDKGRKVEVILTKKRGKRSPTVEEVKHVMDSVLQATKDANAMQVKP-MEG 216 >gi|328772404|gb|EGF82442.1| hypothetical protein BATDEDRAFT_34432 [Batrachochytrium dendrobatidis JAM81] Length = 165 Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 33/154 (21%) Query: 10 DLVEIDSSVTPSVCKIL----------------------------DLRKLRYTIQKNAVE 41 DL+ I+S P VCKI+ D R + Sbjct: 16 DLILINSKKEPPVCKIVSKNPPKPTPSHESKSVTASKDSSLDATNDTRANALNQPTKKAK 75 Query: 42 ARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE 101 KK+ KE+++ ID HD Q+K+ L G ++K++V RG ++ + Sbjct: 76 PTKKRSGIVEKELEINSTIDQHDFQIKMNKGRELLGKGYRLKLTVTERGNRES-TNIVQS 134 Query: 102 LLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 +L + E ++ P +++I IL SK Sbjct: 135 ILERLAED----GKLKNAPTASKKKIIFILDSKK 164 >gi|121701557|ref|XP_001269043.1| translation initiation factor IF3, putative [Aspergillus clavatus NRRL 1] gi|119397186|gb|EAW07617.1| translation initiation factor IF3, putative [Aspergillus clavatus NRRL 1] Length = 235 Score = 57.3 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 11 LVEIDSSV--TPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVK 68 L+++ P VCKI++ +L + A T +K++++ ID HDL + Sbjct: 107 LIQVSPGPPDQPPVCKIVN--RLAMREHERAKAKAAHATKTAVKQIELNWAIDPHDLTHR 164 Query: 69 LKAIDGFLRDGCKVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 LK + FL G +V+I + + +G+ + R ++ ++ + E +P EG Sbjct: 165 LKQLTSFLDKGRRVEIVLTRKKGKRAPTVEEIRNVMDSVLQVTREADATQIKP-MEG 220 >gi|328853134|gb|EGG02275.1| hypothetical protein MELLADRAFT_66481 [Melampsora larici-populina 98AG31] Length = 223 Score = 57.3 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 11 LVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLK 70 L+E++ TP +CK+++ L + + ++ KS IKE+++ I+ +DL K + Sbjct: 101 LIEVNGITTPPICKLINRSDLT-PVTRVRRSSKPTHKSLPIKEIQINNQIEPNDLSTKFR 159 Query: 71 AIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMI 130 L+ G +++IS+ I++ + I+ER EI + + EG+++ M Sbjct: 160 TAIHALQKGHRIRISI------ILNPNGPINFSDLIEERLMEIGAEKIKQEREGKKLFMD 213 Query: 131 LSSKCV 136 S V Sbjct: 214 WSPGKV 219 >gi|294867910|ref|XP_002765289.1| mapk, putative [Perkinsus marinus ATCC 50983] gi|239865302|gb|EEQ98006.1| mapk, putative [Perkinsus marinus ATCC 50983] Length = 1169 Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 14/123 (11%) Query: 9 LDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKKQKS--------TGIKEVKMR 57 LDLV ++++ P VC+I DL K ++KQ++ IK ++ Sbjct: 73 LDLVLVNANKQPPVCRIARKSDLEAQIVDKLKQKEVLKEKQQTDLYSFDPSLKIKYMRYN 132 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I L D Q + L + + + +G+ ++ R+++ + +I++ Sbjct: 133 CRIALPDFQRYILHHRELLLKKHRTEAVIM-KGK--AEEEEMRQMVVRVIAELKDIAKPV 189 Query: 118 CEP 120 P Sbjct: 190 NLP 192 >gi|149034851|gb|EDL89571.1| rCG42766 [Rattus norvegicus] Length = 275 Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 16/130 (12%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ + +L LV+ +++ P +++ + + E K K T KE+ Sbjct: 103 IRLMDKQDLRLVQRNTTSEPPEYQLMT-GAQIHQERLRIREQEKAKPKTGPTVTKELIFS 161 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR------GREIMHQDLGRELLSNIKERFG 111 I HDL K K I ++ V++++K R G E+ E+ + I + Sbjct: 162 SNIGQHDLDTKSKQIQQWIEKKYHVQVTIKKRKDAEQPGSEMD------EIFNQILQTMP 215 Query: 112 EISRIDCEPK 121 I+ PK Sbjct: 216 GIATFLSRPK 225 >gi|253795696|ref|YP_003038792.1| putative translation initiation factor IF-3 [Candidatus Hodgkinia cicadicola Dsem] gi|253740004|gb|ACT34339.1| putative translation initiation factor IF-3 [Candidatus Hodgkinia cicadicola Dsem] Length = 147 Score = 56.5 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDL 62 +A L LVE+ + V K++D+ K +Y +K + R+ K K V+++ I Sbjct: 26 LADGLRLSLVEVGAG----VFKLVDVGKQKYLKKKASASLRRAVK----KRVEIKSNIGR 77 Query: 63 HDLQVKLKAIDGFLRDGCKVKISVKF 88 DL KL +I F+ G KV + KF Sbjct: 78 RDLDTKLASIKKFVDKGFKVSVVAKF 103 >gi|297693728|ref|XP_002824159.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 1 [Pongo abelii] Length = 286 Score = 56.5 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LVE ++S P+ +++ + Q+ E K K T KE+ + Sbjct: 115 IRLMDERHLRLVERNTSTEPAEYQLMT-GLQIFQEQQRLREMEKASPKTGPTVRKELILS 173 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 174 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 233 Query: 118 CEPK-FEGRQMIMIL 131 +P+ G+ ++ +L Sbjct: 234 SKPQAVRGKALMCVL 248 >gi|156097755|ref|XP_001614910.1| translation initiation factor IF-3 [Plasmodium vivax SaI-1] gi|148803784|gb|EDL45183.1| translation initiation factor IF-3, putative [Plasmodium vivax] Length = 117 Score = 56.1 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 39/80 (48%) Query: 40 VEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLG 99 + + K ++ +K++++ P I +DL +K+ + FL +VK + +GRE + + Sbjct: 2 KQLKLKAENKVVKQLRITPRIGANDLLIKINSAKQFLLRRHRVKFILTLKGREYTNVENV 61 Query: 100 RELLSNIKERFGEISRIDCE 119 +++ + I E + Sbjct: 62 KKIFAKISEELKSYGNSESM 81 >gi|297693730|ref|XP_002824160.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 2 [Pongo abelii] gi|297693732|ref|XP_002824161.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 3 [Pongo abelii] gi|297693734|ref|XP_002824162.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 4 [Pongo abelii] gi|297693736|ref|XP_002824163.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 5 [Pongo abelii] Length = 277 Score = 56.1 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LVE ++S P+ +++ + Q+ E K K T KE+ + Sbjct: 106 IRLMDERHLRLVERNTSTEPAEYQLMT-GLQIFQEQQRLREMEKASPKTGPTVRKELILS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 224 Query: 118 CEPK-FEGRQMIMIL 131 +P+ G+ ++ +L Sbjct: 225 SKPQAVRGKALMCVL 239 >gi|169790783|ref|NP_001108513.2| hypothetical protein LOC684274 [Rattus norvegicus] gi|165971435|gb|AAI58795.1| LOC684274 protein [Rattus norvegicus] Length = 276 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 15/130 (11%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILD---LRKLRYTIQKNAVEARKKQKSTGIKEVKMR 57 +++ + +L LV+ +++ P +++ + + R I++ K T KE+ Sbjct: 103 IRLMDKQDLRLVQRNTTSEPPEYQLMTGAQIHQERLRIREQEKAKPKTAGPTVTKELIFS 162 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR------GREIMHQDLGRELLSNIKERFG 111 I HDL K K I ++ V++++K R G E+ E+ + I + Sbjct: 163 SNIGQHDLDTKSKQIQQWIEKKYHVQVTIKKRKDAEQPGSEMD------EIFNQILQTMP 216 Query: 112 EISRIDCEPK 121 I+ PK Sbjct: 217 GIATFLSRPK 226 >gi|39944030|ref|XP_361552.1| hypothetical protein MGG_04026 [Magnaporthe oryzae 70-15] gi|145014749|gb|EDJ99317.1| hypothetical protein MGG_04026 [Magnaporthe oryzae 70-15] Length = 293 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 +C+ ++ +L+ ++ AR+ KE+++ I HDL KLK + FL+ GC Sbjct: 163 PICRFMNREQLKREQKEREKAARR--SKVMTKEMEINWAITKHDLGHKLKQLLKFLQKGC 220 Query: 81 KVKISV--KFRGREIMHQDLGRELLSNIKERFGEI 113 + +I+ K RG++ + +E + +KE +I Sbjct: 221 QCEITFQNKVRGKKKATMEEMQETVRLVKEAIMDI 255 >gi|159163905|pdb|2CRQ|A Chain A, Solution Structure Of C-Terminal Domain Of Riken Cdna 2810012l14 Length = 112 Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS 104 K T KE+ I HDL K K I ++ V++++K R ++ E+ + Sbjct: 9 KTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFN 68 Query: 105 NIKERFGEISRIDCEPK 121 I + +I+ PK Sbjct: 69 QILQTMPDIATFSSRPK 85 >gi|251772033|gb|EES52605.1| translation initiation factor 3 (IF-3) [Leptospirillum ferrodiazotrophum] Length = 63 Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%) Query: 91 REIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 RE++ ++G ELL + G + ++ PK EG M M+L+ Sbjct: 1 REMVRYEVGAELLKKMIAALGPKAIVESPPKLEGSNMTMVLAP 43 >gi|159473366|ref|XP_001694810.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] gi|158276622|gb|EDP02394.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] Length = 201 Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 40/82 (48%) Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 KE+++RP I HDL KL+ +G+L DG +V++ V+F+G + L+ ++ R Sbjct: 86 KELQLRPRISEHDLATKLRRAEGWLEDGLRVQLVVQFKGGDEEGGKAAAALVESVAGRLV 145 Query: 112 EISRIDCEPKFEGRQMIMILSS 133 + + ++ L Sbjct: 146 GKGQPMGGKRQMKNTWLLTLKP 167 >gi|194221797|ref|XP_001915059.1| PREDICTED: similar to Translation initiation factor IF-3, mitochondrial precursor (IF-3Mt) (IF3(mt)) (IF-3(Mt)) (IF3mt) [Equus caballus] Length = 277 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAV---EARKKQKSTGIKEVKMR 57 +++ E +L LV + P +++ + + +AR T KE+ Sbjct: 107 IRLMDERDLRLVRRNPGTEPPQYQLMT-GIQIHEERLRLRASGKARPTPGPTLTKELTFS 165 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ KV+I++K ++ E+ ++I + I+ Sbjct: 166 SNIGQHDLDTKSKQIQQWIEKKYKVQITIKKGKNAEEPENKIEEIFNHILQTMPGIATFS 225 Query: 118 CEP 120 P Sbjct: 226 SRP 228 >gi|291410360|ref|XP_002721464.1| PREDICTED: RIKEN cDNA 2810012L14-like [Oryctolagus cuniculus] Length = 278 Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKS---TGIKEVKMR 57 +++ E +L LV+ D+ P +++ + + E K Q KE+ Sbjct: 106 IRLMDERDLRLVQRDAHAEPPEYQLMT-GLQIHKERLRLREMEKAQPKAGPILTKELTFS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I ++ +V+I++K ++ EL + I + I+ Sbjct: 165 SNIGQHDLDTKNKQIQQWIEKKYQVQITIKKGKNADEPENKTEELFNQILQTMPGIATFK 224 Query: 118 CEP 120 +P Sbjct: 225 SKP 227 >gi|307168167|gb|EFN61446.1| Translation initiation factor IF-3 [Camponotus floridanus] Length = 228 Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 8/123 (6%) Query: 2 QMAQEANLDLVEID---SSVTPSVCKILDLRKLRYTIQKNAVEAR-KKQKSTGIKEVKMR 57 ++A+ L+L++++ S V K++ I + E KQKS G K + Sbjct: 79 RLAKRRKLNLIKVNDFDSKTQRPVYKLMSSSVFIEEIGEKVEEDHGDKQKSKGAKLHYIS 138 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K + + L G K+KI + + S I++ I Sbjct: 139 AKIAEHDLLTKTRNVVKLLNKGHKIKIVITL----DSSSENNIRTRSVIEDALKNYGSIQ 194 Query: 118 CEP 120 P Sbjct: 195 QMP 197 >gi|116199339|ref|XP_001225481.1| hypothetical protein CHGG_07825 [Chaetomium globosum CBS 148.51] gi|88179104|gb|EAQ86572.1| hypothetical protein CHGG_07825 [Chaetomium globosum CBS 148.51] Length = 304 Score = 54.6 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 16/118 (13%) Query: 16 SSVTPSVCKILDLRKLRYTIQKNAVEA-----RKKQKSTGIKEVKMRPVIDLHDLQVKLK 70 +C+I D + A EA RK K++++ I HDL++++ Sbjct: 136 PGPEYPICRIAD------RKAELAAEAERLAMRKSTPKITTKKLEINWAIAPHDLRLRMA 189 Query: 71 AIDGFLRDGCKVKISVK---FRGREIMHQDLGRELLSNIKERFGEI-SRIDCEPKFEG 124 + FL G +V+++++ R ++ D + +L ++ E+ + +P+ EG Sbjct: 190 RLKEFLGKGFQVQVTLRHPKLRRKKRADHDQSKVVLKQVESVVSEVPGAKETKPR-EG 246 >gi|322795062|gb|EFZ17910.1| hypothetical protein SINV_15150 [Solenopsis invicta] Length = 250 Score = 54.6 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 12/134 (8%) Query: 2 QMAQEANLDLVEIDS---SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTG-IKEVKMR 57 ++A+ NL LV+++ + K+++ + + + +KS+ K + + Sbjct: 102 RLAKRRNLTLVKVNDLENKTQRPLYKLVNSTDDILEDTEEKEDTKSAEKSSKGTKLLYVS 161 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDLQ K K + L+ G KVKI + G + G ++ + I++ + Sbjct: 162 AKITEHDLQTKTKNVVRLLKKGHKVKIVITLDGSD------GDKMQTVIEDAVKNDGSVQ 215 Query: 118 CEPKFEGRQMIMIL 131 P + +I+ L Sbjct: 216 RMPSK--KSVILFL 227 >gi|73993365|ref|XP_849667.1| PREDICTED: similar to mitochondrial translational initiation factor 3 isoform 2 [Canis familiaris] gi|73993367|ref|XP_859461.1| PREDICTED: similar to mitochondrial translational initiation factor 3 isoform 3 [Canis familiaris] gi|73993369|ref|XP_534522.2| PREDICTED: similar to mitochondrial translational initiation factor 3 isoform 1 [Canis familiaris] Length = 279 Score = 54.2 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ DS P ++L + + E K K KE+ + Sbjct: 108 IRLMAERDLRLVKRDSGSEPPRYQLL-SGLQIHEERLRLREMEKAHPKPGPVLTKELTLS 166 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE-LLSNIKERFGEISRI 116 I HDL K K I ++ KV+I++K +G+ + + E + + I + I+ Sbjct: 167 SNIGQHDLDTKSKQIQQWIEKKYKVQITIK-KGKNVEEPEHKMEDICNKILQTMPGIATF 225 Query: 117 DCEP 120 P Sbjct: 226 LSRP 229 >gi|328875683|gb|EGG24047.1| hypothetical protein DFA_06185 [Dictyostelium fasciculatum] Length = 935 Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 13/121 (10%) Query: 2 QMAQEANLDLVEIDSSVT--PSVCKI--LDLRKLRYTI---QKNAVEARKKQKSTGIKEV 54 Q A + LD + + P V ++ ++ RY +K EA K+ K + Sbjct: 641 QRAMDEKLDALLVAEGTEELPPVIRLVKMEELIRRYEELLAKKKKREAIKE------KTL 694 Query: 55 KMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEIS 114 + P I D ++K+ + FL G +V + + F E Q++G ++ + I+ Sbjct: 695 FISPGIHEMDRKMKVAQLKRFLTTGYRVTLYLVFPSAESFDQEVGEAVMKKMMYPLRTIA 754 Query: 115 R 115 + Sbjct: 755 K 755 >gi|301783613|ref|XP_002927220.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like [Ailuropoda melanoleuca] gi|281344159|gb|EFB19743.1| hypothetical protein PANDA_016987 [Ailuropoda melanoleuca] Length = 279 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 6/124 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ DS P ++L + Q E K K KE+ Sbjct: 107 IRLMNERDLKLVKRDSGAEPPQYQLLT-GAQIHKEQLRLRELEKAHPKPGPALTKELSFS 165 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE-LLSNIKERFGEISRI 116 I HDL K K I ++ +V+I++K +G+ + E + + I + I+ Sbjct: 166 SNIGQHDLDTKSKQIQQWIGKKYRVQITIK-KGKNTEEPEHKMEAICNQILQTMPGIATF 224 Query: 117 DCEP 120 P Sbjct: 225 SSRP 228 >gi|162312227|ref|NP_595860.2| mitochondrial translation initiation factor (predicted) [Schizosaccharomyces pombe 972h-] gi|212277754|sp|Q76PC7|IF3M_SCHPO RecName: Full=Probable translation initiation factor, mitochondrial; Flags: Precursor gi|157310420|emb|CAB58168.2| mitochondrial translation initiation factor (predicted) [Schizosaccharomyces pombe] Length = 233 Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 6/123 (4%) Query: 17 SVTPSVCKILDL---RKLRYTIQKNAVEARKKQKSTGIKE--VKMRPVIDLHDLQVKLKA 71 + +C I+ KLR EA K + + V D++D++ KLK+ Sbjct: 103 NNKYPICSIISYTELSKLRENQSSRLREAEKSKHKNKTRTRYVLFSWRTDVNDIERKLKS 162 Query: 72 IDGFLRDGCKVKISVKFRGREI-MHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMI 130 + FL+DG V+I V+ + R + Q++ +LS I+ + + P + Sbjct: 163 VKDFLQDGNIVEIHVQNKKRSQPVSQEVRDSILSKIQLEIEGLGKDMKPPIVNSHSATFL 222 Query: 131 LSS 133 L Sbjct: 223 LQP 225 >gi|307069527|ref|YP_003878004.1| translation initiation factor IF-3 [Candidatus Zinderia insecticola CARI] gi|306482787|gb|ADM89658.1| translation initiation factor IF-3 [Candidatus Zinderia insecticola CARI] Length = 179 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 65/114 (57%), Gaps = 3/114 (2%) Query: 1 MQMAQEANLDLVEIDSSVT-PSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPV 59 + +A++ NLDL+EI +++ + K++ ++ +K + K+K+ +K++ ++ Sbjct: 35 LYIAKKKNLDLIEISNNLKGSIIVKMI--NYKKFIYKKKKKYEKNKKKNLSLKKISLKLN 92 Query: 60 IDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 I +HD + K+ I FL+ G KVKI + F+GRE + + ++ +K+ +I Sbjct: 93 IAIHDYKFKINNIFIFLKKGHKVKIILNFKGREKKYINENLIFINKLKKDIKKI 146 >gi|118400025|ref|XP_001032336.1| Translation initiation factor IF-3, N-terminal domain containing protein [Tetrahymena thermophila] gi|89286676|gb|EAR84673.1| Translation initiation factor IF-3, N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 392 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILD-----LRKLRYTIQKNAVEARKKQKSTGIKEVKM 56 A++ NLD+V ++S P +CK ++ K I E+RK K++++ Sbjct: 108 NKAKDMNLDIVLVNSQSNPVICKTVNYKEEIYSKFAKEIISQEAESRKVDSKKPKKQIQI 167 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 I D++ K + + ++K+ ++ Sbjct: 168 SINISNADIRTKAQICRDISKKNPQIKVFIQ 198 >gi|85081578|ref|XP_956746.1| hypothetical protein NCU01469 [Neurospora crassa OR74A] gi|28917822|gb|EAA27510.1| predicted protein [Neurospora crassa OR74A] Length = 626 Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 14/126 (11%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VC I+D R +Q A E R+KQ KE+++ I HDL + + + FLR G Sbjct: 487 PVCVIVDRRAEAAALQAKAKEERRKQ--VSKKELEINWAIAAHDLGFRTRQLQNFLRKGH 544 Query: 81 KVKISV----KFRGREIMHQDLGRELLSNIKERFGEISRI-DCEPKFE---GRQMIMIL- 131 +V+I + + ++ Q+ +E++ I+E E+ ++ + +P + G+ + M+ Sbjct: 545 RVEIMLLQKKDKKQKKTATQEECQEVVRMIREAVAEVPKVQEVKP-MDGQVGKVVRMVFQ 603 Query: 132 --SSKC 135 + K Sbjct: 604 GPTPKK 609 >gi|242215702|ref|XP_002473664.1| predicted protein [Postia placenta Mad-698-R] gi|220727202|gb|EED81128.1| predicted protein [Postia placenta Mad-698-R] Length = 262 Score = 51.1 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 44/111 (39%), Gaps = 3/111 (2%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VE+ ++ + KI+ + K E +++++ KE+++ I DL+ KL Sbjct: 97 VELVATKPEPIVKII-KGSDAFNKVKARQEKKREKRPREEKEIQLTWGISSGDLEHKLSK 155 Query: 72 IDGFLRDGCKVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 + L G +V + +G + + ++ + +P+ Sbjct: 156 VREELEAGNRVNLVYAHKKGHAKPTPQEMEARVQETVDLLADVGS-EWKPR 205 >gi|310794415|gb|EFQ29876.1| translation initiation factor IF-3 [Glomerella graminicola M1.001] Length = 276 Score = 50.7 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 47 KSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS-VKFRGREIMHQDLGRELLSN 105 + IKE+++ I HDL K++ + GFL G KV + K RG + D L+ Sbjct: 166 RLARIKELELNWAIASHDLGHKMRQLKGFLEKGYKVDVIFAKKRGSRVATLDEAEALVKA 225 Query: 106 IKERFGEI 113 +++ E+ Sbjct: 226 VRDVVAEV 233 >gi|67517807|ref|XP_658687.1| hypothetical protein AN1083.2 [Aspergillus nidulans FGSC A4] gi|40747045|gb|EAA66201.1| hypothetical protein AN1083.2 [Aspergillus nidulans FGSC A4] gi|259488608|tpe|CBF88180.1| TPA: translation initiation factor IF3, putative (AFU_orthologue; AFUA_1G12160) [Aspergillus nidulans FGSC A4] Length = 228 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VCK+++ + + A K +K+V++ ID HDL +LK I FL G Sbjct: 112 PVCKVIN--RREAQDRARAFAKAAKAAKKTVKQVELNWAIDPHDLAHRLKKISEFLEKGI 169 Query: 81 KVKISV-KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 +V+I + + R + + + ++ I + + + P EG Sbjct: 170 QVEIILTRKRHKRPATDEEVKNVMEKILQAIKDANATQISP-MEG 213 >gi|326426791|gb|EGD72361.1| hypothetical protein PTSG_00381 [Salpingoeca sp. ATCC 50818] Length = 263 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Query: 52 KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 KEV++ HDLQVK+K FL G +V+I +K R + + +D ++++ ++E+ Sbjct: 163 KEVQLSAWCGEHDLQVKVKQAHKFLSKGLRVRIVIKHRRGQKLDRDQQQQVIHQVQEQLA 222 Query: 112 EISRIDCEPKFEGRQMIMIL 131 ++ + + +G M+ ++ Sbjct: 223 DVGIP-HDARQQGAFMVSMI 241 >gi|157117136|ref|XP_001652952.1| translation initiation factor-3 (IF3), putative [Aedes aegypti] gi|108876153|gb|EAT40378.1| translation initiation factor-3 (IF3), putative [Aedes aegypti] Length = 268 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 10/124 (8%) Query: 2 QMAQEANLDLVEIDS---SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKM-- 56 ++++ +L LV++ V K++ + K E ++ ++ IK K+ Sbjct: 92 KISKRRDLKLVKVVDLDLKTQRPVYKLMTSAEYLEEDLKRREEKKRNKQEAAIKGDKLLT 151 Query: 57 -RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 I HDL K+ + +L +V++ V G + + S + ++ R Sbjct: 152 VSARITEHDLLSKIHNVQKWLNKQYEVRVIVSGDG----DKAKQESVASAFENHVKDLGR 207 Query: 116 IDCE 119 I + Sbjct: 208 IVQK 211 >gi|154310628|ref|XP_001554645.1| hypothetical protein BC1G_06788 [Botryotinia fuckeliana B05.10] gi|150851328|gb|EDN26521.1| hypothetical protein BC1G_06788 [Botryotinia fuckeliana B05.10] Length = 267 Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 + +I++ ++ + +K A +++ T K ++M I+ +DL +L+ + GFL G Sbjct: 125 PIARIVN-KRELFQKKKEAKKSKNPGTVT--KTIEMNWAIEKNDLGHRLEKMRGFLERGN 181 Query: 81 KVKISV--KFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIM 129 KV++ + K +GR + ++ I+E + K EG+ + M Sbjct: 182 KVEVILAGKKKGR-KASVEEAEAVIVRIREFVAGVEGAKERVKMEGKVLGM 231 >gi|281204124|gb|EFA78320.1| Bifunctional endo-1,4-beta-xylanase xylA precursor [Polysphondylium pallidum PN500] Length = 879 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 10/124 (8%) Query: 1 MQMAQEANLDLVEIDSS---VTPSVCKILDLRKLR--YTIQKNAVEARKKQKSTGIKEVK 55 M+MA+ DL+ I S PS+ K + + + Y ++ + A+ ++K K + Sbjct: 547 MKMAKSQEQDLLLIHESNNPENPSIVKFVVMSRHVKSYELKVKELNAKLRKK---DKNIF 603 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + P I DL +K++ + FL+ G K +S+ F + ++++G + + + Sbjct: 604 LSPTIQASDLDMKIRRLKRFLKAGLKTTVSLVFPAT-LFNKEVGDLIFKKVAAPIARYGK 662 Query: 116 -IDC 118 ++ Sbjct: 663 LVEQ 666 >gi|332242361|ref|XP_003270355.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like, partial [Nomascus leucogenys] Length = 255 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LVE ++S+ P+ +++ ++ E K K T KE+ + Sbjct: 83 IRLMDERDLRLVERNTSIEPAEYQLMT-GLQILQERQRLREMEKASPKTGPTLRKELTLS 141 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K M ++ E+ I + I+ Sbjct: 142 SNIGQHDLDTKTKQIQQWIKKKHLVRITIKKGKNVDMSENEMEEIFHQILQTMPGIATFS 201 Query: 118 CEP 120 P Sbjct: 202 SRP 204 >gi|109120265|ref|XP_001095868.1| PREDICTED: translation initiation factor IF-3, mitochondrial-like isoform 3 [Macaca mulatta] Length = 278 Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 61/138 (44%), Gaps = 6/138 (4%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ ++S P+ +++ ++ E +K K T KE+ Sbjct: 106 IRLMDERDLRLVQRNASTEPAEYQLMT-GMQILQERQRLREMKKASPKTGPTLTKELTFS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ +V+I++K + ++ E+ I + ++ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKERQVRITIKKGKNVDVSENKMEEIFHQILQTMPGMATFL 224 Query: 118 CEPKFE--GRQMIMILSS 133 P+ G+ ++ +L Sbjct: 225 SRPQAVQGGKALMCVLRP 242 >gi|302842169|ref|XP_002952628.1| hypothetical protein VOLCADRAFT_105608 [Volvox carteri f. nagariensis] gi|300261972|gb|EFJ46181.1| hypothetical protein VOLCADRAFT_105608 [Volvox carteri f. nagariensis] Length = 271 Score = 49.6 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 47 KSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNI 106 K+ KE+ ++P I HDL KL+ ++G+L DG + K+ V+F R + L+ ++ Sbjct: 122 KAEPTKEMHLKPRIAEHDLTYKLRQMEGWLADGIRTKLVVEF--RAAEQSEAAAALMDSV 179 Query: 107 KERFGEISRIDCEPKFEGRQMIMILSS 133 R + + ++L Sbjct: 180 VARLAGKGQPLGPRRQNKDSWFVMLRP 206 >gi|289619248|emb|CBI54215.1| unnamed protein product [Sordaria macrospora] Length = 293 Score = 48.4 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VC I+D + + A +++K KE+++ I HDL + + + FL+ G Sbjct: 149 PVCVIID--RRAEAEAQKAKAKEERKKQVTKKELEINWAIAAHDLGFRTRQLQKFLQKGH 206 Query: 81 KVKISVKFRGREIMHQDLG-----RELLSNIKERFGEISRIDCEPKFEG 124 +V++ + + + +E++ I+E E+ ++ EG Sbjct: 207 RVEVMLLQKKAKGQKTKQATGEECKEVVRLIREAVAEVPKVQEVKAMEG 255 >gi|38566834|emb|CAE76140.1| related to translation initiation factor IF-3 [Neurospora crassa] Length = 285 Score = 48.4 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 12/125 (9%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 VC I+D R +Q A E R+KQ KE+++ I HDL + + + FLR G Sbjct: 146 PVCVIVDRRAEAAALQAKAKEERRKQ--VSKKELEINWAIAAHDLGFRTRQLQNFLRKGH 203 Query: 81 KVKISV----KFRGREIMHQDLGRELLSNIKERFGEISRI-DCEPK--FEGRQMIMIL-- 131 +V+I + + ++ Q+ +E++ I+E E+ ++ + +P G+ + M+ Sbjct: 204 RVEIMLLQKKDKKQKKTATQEECQEVVRMIREAVAEVPKVQEVKPMDGQVGKVVRMVFQG 263 Query: 132 -SSKC 135 + K Sbjct: 264 PTPKK 268 >gi|294949327|ref|XP_002786150.1| Translation initiation factor IF-3, putative [Perkinsus marinus ATCC 50983] gi|239900290|gb|EER17946.1| Translation initiation factor IF-3, putative [Perkinsus marinus ATCC 50983] Length = 200 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 14/123 (11%) Query: 9 LDLVEIDSSVTPSVCKIL---DLRKLRYTIQKNAVEARKKQKS--------TGIKEVKMR 57 LDLV ++++ P VC+I DL K ++KQ++ IK ++ Sbjct: 15 LDLVLVNANKQPPVCRIARKSDLEAQIVDKLKQKEVLKEKQQTDLYSFDPSLKIKYMRYN 74 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I L D Q + L + + + E ++ R+++ + +I++ Sbjct: 75 CRIALPDFQRYILHHRELLLKKHRTEAVIMKGKAE---EEEMRQMVVRVIAELKDIAKPV 131 Query: 118 CEP 120 P Sbjct: 132 NLP 134 >gi|170049419|ref|XP_001855932.1| translation initiation factor-3 [Culex quinquefasciatus] gi|167871263|gb|EDS34646.1| translation initiation factor-3 [Culex quinquefasciatus] Length = 256 Score = 46.9 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 10/124 (8%) Query: 2 QMAQEANLDLVEIDS---SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKE---VK 55 ++++ +L LV+I V K++ + K E ++ + IK + Sbjct: 81 RISKRRDLKLVKIIDLDLKTQRPVYKLMTSAEYLNEDLKRREEKKRSKAEATIKGDKLLT 140 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + I HDL K++ + +LR +V+I V G + + + I+ E + Sbjct: 141 LSARITEHDLNSKIQNVVKWLRKSYEVRIVVSGDG----DKTKQESVATRIEHSTKEAGK 196 Query: 116 IDCE 119 I + Sbjct: 197 IVQK 200 >gi|261878550|ref|NP_690876.3| translation initiation factor IF-3, mitochondrial [Homo sapiens] gi|261878554|ref|NP_001159733.1| translation initiation factor IF-3, mitochondrial [Homo sapiens] gi|261878559|ref|NP_001159734.1| translation initiation factor IF-3, mitochondrial [Homo sapiens] gi|261878564|ref|NP_001159735.1| translation initiation factor IF-3, mitochondrial [Homo sapiens] gi|317373570|sp|Q9H2K0|IF3M_HUMAN RecName: Full=Translation initiation factor IF-3, mitochondrial; Short=IF-3(Mt); Short=IF-3Mt; Short=IF3(mt); Short=IF3mt; Flags: Precursor gi|55662165|emb|CAH70316.1| mitochondrial translational initiation factor 3 [Homo sapiens] Length = 278 Score = 46.9 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ ++S P+ +++ ++ E K K T KE+ + Sbjct: 106 IRLMDERDLRLVQRNTSTEPAEYQLMT-GLQILQERQRLREMEKANPKTGPTLRKELILS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 224 Query: 118 CEP 120 P Sbjct: 225 SRP 227 >gi|332841083|ref|XP_509598.3| PREDICTED: translation initiation factor IF-3, mitochondrial isoform 5 [Pan troglodytes] gi|332841085|ref|XP_003314136.1| PREDICTED: translation initiation factor IF-3, mitochondrial isoform 1 [Pan troglodytes] gi|332841087|ref|XP_003314137.1| PREDICTED: translation initiation factor IF-3, mitochondrial isoform 2 [Pan troglodytes] gi|332841089|ref|XP_003314138.1| PREDICTED: translation initiation factor IF-3, mitochondrial isoform 3 [Pan troglodytes] gi|332841091|ref|XP_003314139.1| PREDICTED: translation initiation factor IF-3, mitochondrial isoform 4 [Pan troglodytes] gi|12005984|gb|AAG44698.1|AF265440_1 DC38 [Homo sapiens] gi|15625534|gb|AAL04150.1|AF410851_1 mitochondrial translational initiation factor 3 [Homo sapiens] gi|119628811|gb|EAX08406.1| mitochondrial translational initiation factor 3, isoform CRA_a [Homo sapiens] gi|119628812|gb|EAX08407.1| mitochondrial translational initiation factor 3, isoform CRA_a [Homo sapiens] gi|119628813|gb|EAX08408.1| mitochondrial translational initiation factor 3, isoform CRA_a [Homo sapiens] gi|119628814|gb|EAX08409.1| mitochondrial translational initiation factor 3, isoform CRA_a [Homo sapiens] gi|119628817|gb|EAX08412.1| mitochondrial translational initiation factor 3, isoform CRA_a [Homo sapiens] Length = 278 Score = 46.9 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ ++S P+ +++ ++ E K K T KE+ + Sbjct: 106 IRLMDERDLRLVQRNTSTEPAEYQLMT-GLQILQERQRLREMEKANPKTGPTLRKELILS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 224 Query: 118 CEP 120 P Sbjct: 225 SRP 227 >gi|145239835|ref|XP_001392564.1| translation initiation factor IF3 [Aspergillus niger CBS 513.88] gi|134077078|emb|CAK45419.1| unnamed protein product [Aspergillus niger] Length = 229 Score = 46.9 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 21 SVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 +CK+++ ++ + + +A+ K G+K++++ ID HDL +LK + FL G Sbjct: 117 PICKVVN----KFEL-REIAKAKAKPAKDGLKQLELNWAIDAHDLSHRLKQLTNFLEKGR 171 Query: 81 KVK-ISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEG 124 KV+ I + + + + + L+ + E E + P EG Sbjct: 172 KVELILTRKKHKRSPTVEEVKNLMDKVMETVREAKAMPVRP-MEG 215 >gi|28278233|gb|AAH46166.1| Mitochondrial translational initiation factor 3 [Homo sapiens] gi|312153202|gb|ADQ33113.1| mitochondrial translational initiation factor 3 [synthetic construct] Length = 278 Score = 46.9 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ ++S P+ +++ ++ E K K T KE+ + Sbjct: 106 IRLMDERDLRLVQRNTSTEPAEYQLMT-GLQILQERQRLREMEKANPKTGPTLRKELILS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 224 Query: 118 CEP 120 P Sbjct: 225 SRP 227 >gi|325973239|ref|YP_004250303.1| translation initiation factor IF-3 [Mycoplasma suis str. Illinois] gi|323651841|gb|ADX97923.1| translation initiation factor IF-3 [Mycoplasma suis str. Illinois] Length = 103 Score = 46.5 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD-LGRELLSNIKER 109 +K + ++ ID HDL+ K+K + +L G +V++ +K + + LL IKE Sbjct: 1 MKSIALKLKIDSHDLEWKIKKMKEWLEAGDRVQLIIKTPFETANFKSPIAESLLGRIKEI 60 Query: 110 FGEISR 115 + + Sbjct: 61 IQDAGK 66 >gi|70944050|ref|XP_741999.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520730|emb|CAH88157.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 122 Score = 46.5 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 28/54 (51%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 RY +K + + K ++ +K++++ P I +DL +K+ + FL +V Sbjct: 53 GYERYIQEKKMKQLKMKSENKTVKQLRITPRIGTNDLLIKINSAKQFLLGRHRV 106 >gi|332017401|gb|EGI58133.1| hypothetical protein G5I_13779 [Acromyrmex echinatior] Length = 222 Score = 46.1 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 11/112 (9%) Query: 2 QMAQEANLDLVEIDS---SVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGI-KEVKMR 57 ++A+ NL L+++ + K++ L I+ + QKS+ I K + Sbjct: 75 RLAKRRNLTLIKVSDLEDKTQRPLYKLVKTANLLEEIEDTQDTDKTAQKSSKIIKLFYIS 134 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKER 109 I HDL K K + L G KVK+++ G D G+ + + E Sbjct: 135 AKITEHDLWTKTKNMMKLLNKGHKVKVAITLDG-----ADGGK--MQRVIED 179 >gi|116284006|gb|AAH39599.1| MTIF3 protein [Homo sapiens] Length = 262 Score = 46.1 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK---KQKSTGIKEVKMR 57 +++ E +L LV+ ++S P+ +++ ++ E K K T KE+ + Sbjct: 106 IRLMDERDLRLVQRNTSTEPAEYQLMT-GLQILQERQRLREMEKANPKTGPTLRKELILS 164 Query: 58 PVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 I HDL K K I +++ V+I++K + ++ E+ I + I+ Sbjct: 165 SNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFS 224 Query: 118 CEP 120 P Sbjct: 225 SRP 227 >gi|291001919|ref|XP_002683526.1| predicted protein [Naegleria gruberi] gi|284097155|gb|EFC50782.1| predicted protein [Naegleria gruberi] Length = 263 Score = 46.1 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 9/116 (7%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKE-----VKM 56 ++A LDL+ + SV+P V K+ D ++ K ++E ++ Sbjct: 105 EIALNEGLDLILVVDSVSPPVVKLGDYVVFLKHAIIKDKLSQLKDLEKELEEKKTKEIRF 164 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 ID HDL VK+K + FL G KVKI FR + +++ ++L + + E Sbjct: 165 SANIDTHDLDVKMKKMIKFLVTGKKVKILC-FR---VENEEQAFQMLKDFVGKAKE 216 >gi|169625686|ref|XP_001806246.1| hypothetical protein SNOG_16119 [Phaeosphaeria nodorum SN15] gi|160705707|gb|EAT76491.2| hypothetical protein SNOG_16119 [Phaeosphaeria nodorum SN15] Length = 272 Score = 45.7 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 17/119 (14%) Query: 11 LVEIDS-------SVTP---SVCKILDLRKLRYTIQKNAVEARKKQKSTGI----KEVKM 56 LV++ + P C+++ LR +K AR++ K G K ++ Sbjct: 110 LVQMTPGKVDEFGNQDPNDLPTCRVMSKIALREQHEKKLDLARRQAKGLGAGPAPKNMEF 169 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISV--KFRGREIMHQDLGRELLSNIKERFGEI 113 I DL+ +L + FL DG KV++ + K +GR +D +++ ++ E+ Sbjct: 170 SWAIAGGDLKHRLSKLKEFLGDGRKVEVLMAPKKKGR-TATEDEASGVIAAVRRAVEEV 227 >gi|145509911|ref|XP_001440894.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408122|emb|CAK73497.1| unnamed protein product [Paramecium tetraurelia] Length = 317 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 41/85 (48%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A + DL+ I+ + P++CK+ D + N + K+Q+ + K+ I Sbjct: 64 KKADKLGQDLIMINQEIKPALCKVCDYSDELASKFMNDIVKIKEQQKLNDQHFKLSHTIT 123 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISV 86 + DL++K+ ++ +++++ Sbjct: 124 MQDLKLKVNQAKDLIKKQNNLRVTI 148 >gi|298705791|emb|CBJ28960.1| expressed unknown protein [Ectocarpus siliculosus] Length = 105 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 12/107 (11%) Query: 26 LDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKIS 85 +D +K Y +K K + KE+++ +I HD K+ + +L G VK+ Sbjct: 1 MDFKKEEYRKKKQKKANAK--RIQKKKEIRLGGMIADHDFGRKVNDVKKYLERGDVVKVV 58 Query: 86 VKFRGREIMHQDLGRELL-SNIKERFGEISRIDCEPKFEGRQMIMIL 131 ++ + +L +E+ E EG +M I Sbjct: 59 LEANISLLKRSGNCLNVLQEKFEEQMEEY---------EGVRMSCIF 96 >gi|158300265|ref|XP_320232.4| AGAP012309-PA [Anopheles gambiae str. PEST] gi|157013075|gb|EAA00776.4| AGAP012309-PA [Anopheles gambiae str. PEST] Length = 221 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 49/124 (39%), Gaps = 8/124 (6%) Query: 2 QMAQEANLDLVEIDS---SVTPSVCKILDLRKLRYT---IQKNAVEARKKQKSTGIKEVK 55 ++A NL LV+I V +++ + ++ ++++ G K + Sbjct: 85 KIANRRNLKLVKITDLDTKTQRPVYRLMTGSEYLNEDLKRREEKKKSKQDASVKGDKLLT 144 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + I HDL K++ + +L +V+I V G ++ ++ + + + Sbjct: 145 ISARIAEHDLASKIQNVLKWLSKSYEVRIVVT--GDGAGNKAKQEDIAQRFEASIKDTGK 202 Query: 116 IDCE 119 I + Sbjct: 203 IVQK 206 >gi|91223968|ref|ZP_01259232.1| initiation factor IF3 [Vibrio alginolyticus 12G01] gi|91191460|gb|EAS77725.1| initiation factor IF3 [Vibrio alginolyticus 12G01] Length = 35 Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 104 SNIKERFGEISRIDCEPK-FEGRQMIMILSSKC 135 + +KE EI+ ++ PK EGRQMIM+L+ K Sbjct: 2 NRLKEDTAEIAVVESFPKKIEGRQMIMVLAPKK 34 >gi|239792352|dbj|BAH72529.1| hypothetical protein [Acyrthosiphon pisum] Length = 209 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 13/123 (10%) Query: 2 QMAQEANLDLVEI---DSSVTPSVCKILDLRKLRYTIQK--NAVEARKKQKSTGIKEVKM 56 +M + L LV+I D+ V +++ + K + + + G K V + Sbjct: 78 KMCERRGLKLVKIIDIDTKTQRPVYQMMTANQFLKEDHKSHQDKDEKNHNQLKGEKTVLI 137 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRI 116 I DL+ K+ I +L +V++++ D E+ + + E SR+ Sbjct: 138 NCRIGQSDLESKVNNIRKWLSKMNEVRVTIT--------GDTANEVADEVIKMTQESSRV 189 Query: 117 DCE 119 Sbjct: 190 VQR 192 >gi|145494820|ref|XP_001433404.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400521|emb|CAK66007.1| unnamed protein product [Paramecium tetraurelia] Length = 317 Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 41/85 (48%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVID 61 + A + DL+ I+ + P++CK+ D + N + K+Q+ + K+ I Sbjct: 64 KKADKLGQDLIMINQEIKPALCKVCDYSDELASKFMNDIVKIKEQQKLNDQHFKLSHTIT 123 Query: 62 LHDLQVKLKAIDGFLRDGCKVKISV 86 + DL++K+ ++ +++++ Sbjct: 124 MQDLKLKVNQAKDLIKKQNTLRVTI 148 >gi|169659183|dbj|BAG12776.1| hypothetical protein [Sorogena stoianovitchae] Length = 394 Score = 43.0 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 9/115 (7%) Query: 5 QEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEAR------KKQKSTGIKEVKMRP 58 + +D+V I+ S+ P++CK D R Y + ++ K + K +++ Sbjct: 92 DQMGVDIVMINPSIRPAICKATDYRDELYQKFVKDIISKDATYISKSKTKAQKKIIRLGA 151 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEI 113 + + DL+ K+KA + +K+ + + GR ++ + + Sbjct: 152 RMTISDLRNKVKAAADLGKRSEIIKVQMAVSDK---TSGPGRNIMMTFADMTKDF 203 >gi|312376500|gb|EFR23563.1| hypothetical protein AND_12667 [Anopheles darlingi] Length = 681 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 50/124 (40%), Gaps = 8/124 (6%) Query: 2 QMAQEANLDLVEI---DSSVTPSVCKILDLRKLRYT---IQKNAVEARKKQKSTGIKEVK 55 +++ NL LV++ DS V +++ + ++ ++++ G K + Sbjct: 446 KISNRRNLKLVKVTDLDSKTQRPVYRLMTGSEYLTEDLKRREEKKKSKQDATVKGDKLLT 505 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISR 115 + I HDL K++ + +L +V++ V G + ++ + E + Sbjct: 506 ISARIAEHDLVSKIQNVQKWLTKSYEVRVVVT--GDGAGSKGKQEDIAQRFETNVKECGK 563 Query: 116 IDCE 119 I + Sbjct: 564 IVQK 567 >gi|320165298|gb|EFW42197.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 689 Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 18/97 (18%) Query: 33 YTIQKNAVEARKKQKSTGI----------KEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 + + ++ R Q + I KEV++ +DL++K+ FL+ G V Sbjct: 449 FEKAEAEMKNRLAQAESAIRTKIRNFNNRKEVQLTNSTAENDLKLKIVRARRFLKRGNLV 508 Query: 83 KISVKFRGRE--------IMHQDLGRELLSNIKERFG 111 I+V FR Q+ +L+ + Sbjct: 509 MITVLFRRARKRTAKPFNRQDQERQMKLIMDAISDIS 545 >gi|330842846|ref|XP_003293380.1| hypothetical protein DICPUDRAFT_83936 [Dictyostelium purpureum] gi|325076295|gb|EGC30093.1| hypothetical protein DICPUDRAFT_83936 [Dictyostelium purpureum] Length = 589 Score = 41.9 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 7/86 (8%) Query: 30 KLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 K QK A K K V I +D Q K+ + FL V+ ++ F+ Sbjct: 361 KFLEENQKKLDSATK-----QTKNVLFSSTISENDKQTKINQVKNFLLKRHTVEATLTFK 415 Query: 90 GREIMHQDLGRELLSNIKERFGEISR 115 E++ + E ++ + I++ Sbjct: 416 --EVIDDSVATEFFEALESQLTGIAK 439 >gi|326512346|dbj|BAJ99528.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 41.5 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDL-----RKLRYTIQKNAVEARKKQKSTGIKEVKM 56 + AQ LD+V ++ S +P +C+ D + Y + K+T +K +K+ Sbjct: 73 KKAQSLGLDMVVVNLSSSPVICRASDFRAKLISRF-YNEIVLKRQKEWIAKATTVKTLKV 131 Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 P ++ ++ +K+K + KV++ ++ Sbjct: 132 SPALNKDEMGLKIKQLVELSNKNLKVRVIMQ 162 >gi|321258797|ref|XP_003194119.1| hypothetical protein CGB_E1140W [Cryptococcus gattii WM276] gi|317460590|gb|ADV22332.1| Hypothetical Protein CGB_E1140W [Cryptococcus gattii WM276] Length = 203 Score = 41.1 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 11 LVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQK-------STGIKEVKMRPVIDLH 63 L + V K+++ Q+ K++K S KEV++ Sbjct: 88 LTLVSVDGEYPVVKLVN------KAQERDRAKEKEEKSKVKRKISMEEKEVQVSWQSAKG 141 Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGR-EIMHQDLGRELLSNIKERFGE 112 DL KL+ G L G +V++ R R E +++ E+++ + E Sbjct: 142 DLGHKLEMAKGILEKGDRVQVVFANRRRAEPINERQKDEIVALFEGTLEE 191 >gi|302673150|ref|XP_003026262.1| hypothetical protein SCHCODRAFT_114720 [Schizophyllum commune H4-8] gi|300099943|gb|EFI91359.1| hypothetical protein SCHCODRAFT_114720 [Schizophyllum commune H4-8] Length = 222 Score = 40.7 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKV 82 KI+D ++ R K + K K KE+++ D HDL+ KL + L G +V Sbjct: 103 VKIID-KRERARWLKEQKQRAKAAKKPAPKEMQLTWATDGHDLEHKLSKVRKDLSRGARV 161 Query: 83 KISVKFR--GREIMHQDLGRELLSNIKERFGEISRIDCEPK 121 I++ + +E+ ++ ++ L I + ++S + +P+ Sbjct: 162 DIALAQKSGQKELTAKEKQQK-LQGIVDSLQDVST-EWKPR 200 >gi|84998416|ref|XP_953929.1| hypothetical protein [Theileria annulata] gi|65304927|emb|CAI73252.1| hypothetical protein, conserved [Theileria annulata] Length = 242 Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 12/97 (12%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNA-----VEARKKQKST-------G 50 +A++ N +L+ + P +C I + +++ ++ E+++ K Sbjct: 69 LAKKFNSNLILFKPNSIPPICVIQNYSDFIKSLENSSTTGVVNESKEDDKGVYAFDPSLK 128 Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 K +++ + DL KL +I F+ G KV I ++ Sbjct: 129 GKTIQISENCAIPDLNRKLSSIRKFITSGHKVDIILQ 165 >gi|71033457|ref|XP_766370.1| hypothetical protein [Theileria parva strain Muguga] gi|68353327|gb|EAN34087.1| hypothetical protein TP01_0849 [Theileria parva] Length = 940 Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 23/103 (22%) Query: 3 MAQEANLDLVEIDSSVTPSVCKILDLRKLRYTI----------QKNAVEAR--------K 44 +A++ N +L+ + P +C I + ++ + E + Sbjct: 767 LAKKFNSNLILFKPNSVPPICIIQNYSDFIQSLSNPTTPSVSAESKVEEDKGVYSFDPSL 826 Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 K K+ I E P DL KL +I F+ G KV I ++ Sbjct: 827 KSKTVQISENCAIP-----DLNRKLSSIRKFITSGHKVDIILQ 864 >gi|321478383|gb|EFX89340.1| hypothetical protein DAPPUDRAFT_310351 [Daphnia pulex] Length = 153 Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%) Query: 45 KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 K K K + + I+ HDL KL I +L G VK S+ Sbjct: 55 KLKKKSPKMITFKDKIEKHDLDAKLNNIKKWLSKGHFVKASI 96 >gi|316973232|gb|EFV56852.1| hypothetical protein Tsp_02135 [Trichinella spiralis] Length = 236 Score = 38.8 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 K + K E +KK K+ K +++ I HDL+ K+ + L ++I + Sbjct: 134 GKELFD--KRNEENKKKAKNVKEKILRVHSTISQHDLEAKMNHVFQLLEKKHPIRIEIIS 191 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRI 116 + E + L NIK + + + Sbjct: 192 KSEENT--NSTERFLDNIKTLLQDKAAV 217 >gi|66771319|gb|AAY54971.1| IP07850p [Drosophila melanogaster] Length = 159 Score = 38.4 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 ++A E K +K+ K + + I HDL +LK I +L +V+I ++ Sbjct: 43 EQSRSASEKVKDKKTE--KSLTIGARITEHDLSSRLKNIVKWLGKRHEVRILIQ 94 >gi|169869422|ref|XP_001841277.1| hypothetical protein CC1G_09969 [Coprinopsis cinerea okayama7#130] gi|116497677|gb|EAU80572.1| hypothetical protein CC1G_09969 [Coprinopsis cinerea okayama7#130] Length = 292 Score = 38.4 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 9/129 (6%) Query: 12 VEIDSSVTPSVCKILDLRKLRY----TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 VE+ S TP V +I+D+++ R QK+ A +K KE ++ + D Sbjct: 114 VELVSE-TPPVVRIVDIKEARAGTLAERQKSKRGAGQKDMH---KEAQLTWSMAEADEAH 169 Query: 68 KLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRE-LLSNIKERFGEISRIDCEPKFEGRQ 126 KL + L G +V I + R + L ++++F ++++ + R Sbjct: 170 KLSKVREDLEKGYRVDIVFSPKPRARAPAQMEMRFKLEEVRKKFDDVAKEWKAMSVDKRM 229 Query: 127 MIMILSSKC 135 ++ L SK Sbjct: 230 GVLYLQSKV 238 >gi|195430754|ref|XP_002063413.1| GK21896 [Drosophila willistoni] gi|194159498|gb|EDW74399.1| GK21896 [Drosophila willistoni] Length = 211 Score = 38.0 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 44 KKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 K QK + K + + I HDL +LK I +L +V+I ++ Sbjct: 112 KNQKKSE-KSLTIGARITDHDLSSRLKNIVKWLGKKHEVRILIQ 154 >gi|260892003|ref|YP_003238100.1| UDP-N-acetylglucosamine 2-epimerase [Ammonifex degensii KC4] gi|260864144|gb|ACX51250.1| UDP-N-acetylglucosamine 2-epimerase [Ammonifex degensii KC4] Length = 401 Score = 38.0 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDL--GRELLSNIKERFGEISRI 116 D Q + FL +G +V I V RE + L L + E+F +++ + Sbjct: 185 DYQFTDGRLYRFLEEGKRV-ILVTTHRRENWGEPLRQVYRALRRVVEQFEDVAVV 238 >gi|316964055|gb|EFV49346.1| putative translation initiation factor IF-3 [Trichinella spiralis] Length = 236 Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 29 RKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKF 88 K + K E +KK K+ K +++ I HDL+ K+ + L ++I + Sbjct: 134 GKELFD--KRNEENKKKAKNVKEKILRVHSTISQHDLEAKMNHVFQLLEKKHPIRIEIIS 191 Query: 89 RGREIMHQDLGRELLSNIKERFGEISRI 116 + E + L NIK + + + Sbjct: 192 KSEENT--NSTETFLDNIKTLLQDKAAV 217 >gi|134111659|ref|XP_775365.1| hypothetical protein CNBE0830 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258024|gb|EAL20718.1| hypothetical protein CNBE0830 [Cryptococcus neoformans var. neoformans B-3501A] Length = 277 Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 48 STGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIK 107 S KEV++ DL KL+ G L G +V++ F R + E+ K Sbjct: 126 SMEEKEVQVSWQSAKGDLGHKLEMAKGILEKGDRVQVV--FANRRRAEPGILEEVGKKWK 183 Query: 108 ER 109 E Sbjct: 184 ED 185 >gi|156084586|ref|XP_001609776.1| hypothetical protein [Babesia bovis T2Bo] gi|154797028|gb|EDO06208.1| hypothetical protein BBOV_II002530 [Babesia bovis] Length = 544 Score = 37.3 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 30/63 (47%) Query: 53 EVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGE 112 ++K+ I +DL + K FL DG V ++ +G+ + + +++ G+ Sbjct: 147 DMKIWMNIGTNDLLTRCKRARKFLEDGIPVTFKIEGQGQTSNYITHAKIIVNTAIGVLGD 206 Query: 113 ISR 115 +++ Sbjct: 207 VAK 209 >gi|85726431|ref|NP_610759.2| CG13163 [Drosophila melanogaster] gi|66771183|gb|AAY54903.1| IP07950p [Drosophila melanogaster] gi|84795758|gb|AAF58534.2| CG13163 [Drosophila melanogaster] Length = 232 Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 ++A E K +K+ K + + I HDL +LK I +L +V+I ++ Sbjct: 116 EQSRSASEKVKDKKTE--KSLTIGARITEHDLSSRLKNIVKWLGKRHEVRILIQ 167 >gi|71028748|ref|XP_764017.1| hypothetical protein [Theileria parva strain Muguga] gi|68350971|gb|EAN31734.1| hypothetical protein TP04_0382 [Theileria parva] Length = 488 Score = 37.3 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%) Query: 30 KLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 + Y + + + K+K EV++ I DL+ K G + ++++ Sbjct: 211 RELYKTKSYIEKPKVKKKVYNTIEVRVSLRIQEADLRTKCNFFRKKALKGYPLVLTIRTE 270 Query: 90 GREIMHQDLGRELLSNIKERFGEISR 115 G + +++ K+ Sbjct: 271 GDPKDYTLAAEGIIAKAKKLLSNACV 296 >gi|195333698|ref|XP_002033523.1| GM21359 [Drosophila sechellia] gi|194125493|gb|EDW47536.1| GM21359 [Drosophila sechellia] Length = 232 Score = 36.9 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 ++A E K +KS K + + I HDL +LK I +L +V+I ++ Sbjct: 116 EQSRSASEKVKDKKSE--KSLTIGARITEHDLSSRLKNIVKWLGKRHEVRILIQ 167 >gi|66805981|ref|XP_636712.1| hypothetical protein DDB_G0288477 [Dictyostelium discoideum AX4] gi|60465110|gb|EAL63210.1| hypothetical protein DDB_G0288477 [Dictyostelium discoideum AX4] Length = 637 Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 2 QMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKN---AVEARKKQKSTGIKEVKMRP 58 ++A LD+V +++ L +K E + + G K V + Sbjct: 356 RLAYTKKLDIVLTFGQNGNVYGRLVTLEDFIKISEKRLEQERERKVDHATKGTKGVIISS 415 Query: 59 VIDLHDLQVKLKAIDGFLRDGCKVKISVKFR 89 I+ +D VK I FL V++++ ++ Sbjct: 416 NINENDRAVKFDQIVKFLLKRHSVEVTITYK 446 >gi|66771455|gb|AAY55039.1| IP07750p [Drosophila melanogaster] Length = 132 Score = 36.5 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 ++A E K +K+ K + + I HDL +LK I +L +V+I ++ Sbjct: 16 EQSRSASEKVKDKKTE--KSLTIGARITEHDLSSRLKNIVKWLGKRHEVRILIQ 67 >gi|91081363|ref|XP_971517.1| PREDICTED: similar to translation initiation factor-3 (IF3), putative [Tribolium castaneum] Length = 221 Score = 36.5 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Query: 2 QMAQEANLDLVEID---SSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVK--- 55 ++++ +L LV+I + V +++ + K E RK+++ IK K Sbjct: 77 KLSKRRDLKLVKIVDVDAKTQRPVYQLMTGEEYHAEDLK-QREKRKEERQKNIKGEKVLL 135 Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 + I HDL ++LK +L +V++ + Sbjct: 136 LNCRITQHDLTIQLKKALKWLHKMYEVRVVI 166 >gi|300867506|ref|ZP_07112157.1| hypothetical protein OSCI_3400028 [Oscillatoria sp. PCC 6506] gi|300334500|emb|CBN57325.1| hypothetical protein OSCI_3400028 [Oscillatoria sp. PCC 6506] Length = 63 Score = 36.5 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 87 KFRGREIMHQDLGRELLSNIKERFGEIS-RIDCEPKFE 123 FRGREI H +L +LL + F + PK E Sbjct: 1 MFRGREIQHSNLAEDLLKRMATVFAGTGEKCSKAPKKE 38 >gi|47217051|emb|CAG10103.1| unnamed protein product [Tetraodon nigroviridis] Length = 334 Score = 36.5 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 31 LRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRG 90 Y K ++A++++ + I+ + + L VKL G +++ Sbjct: 147 FGYEKSKQFMDAKRRRGKSDIRALIDLHNNEAGRLAVKLYMRTECKCHGLSGSCTLRTCW 206 Query: 91 REIMH-QDLGRELLSNI 106 R++ H +++G LL Sbjct: 207 RKMPHFREVGDRLLERF 223 >gi|328856225|gb|EGG05347.1| hypothetical protein MELLADRAFT_88020 [Melampsora larici-populina 98AG31] Length = 584 Score = 36.5 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 13/83 (15%) Query: 64 DLQVKLKAIDGFLRDG-----CKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 D K DG ++K + K RG ++ ++ +L+ + +I+ I Sbjct: 436 DGWFKTGDKIRMESDGQMFYVDRIKDTFKNRGLQVAPSEISSLILNRFSDLIADIAVI-G 494 Query: 119 EPKFEGRQ-------MIMILSSK 134 P E ++ + ++L+ K Sbjct: 495 IPSSESKRDIGEEAWVFIVLTPK 517 >gi|71019935|ref|XP_760198.1| hypothetical protein UM04051.1 [Ustilago maydis 521] gi|46099743|gb|EAK84976.1| hypothetical protein UM04051.1 [Ustilago maydis 521] Length = 308 Score = 36.5 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 22 VCKILDLRKLRYT----IQKNAVEARKKQKSTGI----KEVKMRPVIDLHDLQVKLKAID 73 +CK++D +K + +++ + Q + KEV++ + +DL KL Sbjct: 157 ICKLID-KKEEFDRLRNLKRKSHNGSFNQTAANSTSSSKEVQLTWSVSPNDLAHKLGKAK 215 Query: 74 GFLRDGCKVKISV 86 + G ++ + + Sbjct: 216 KEMLKGARINVVI 228 >gi|153873054|ref|ZP_02001765.1| ATPase [Beggiatoa sp. PS] gi|152070479|gb|EDN68234.1| ATPase [Beggiatoa sp. PS] Length = 299 Score = 36.1 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 69 LKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGR 125 A + LR+G + V++ E H D+ + +L + ER ++ R+D EP +GR Sbjct: 108 AGAAEHLLREGDNIANVVQYLADE--HPDILQTILQRLAERVPKLERVDSEPTIDGR 162 >gi|89096648|ref|ZP_01169540.1| hypothetical protein B14911_13447 [Bacillus sp. NRRL B-14911] gi|89088663|gb|EAR67772.1| hypothetical protein B14911_13447 [Bacillus sp. NRRL B-14911] Length = 328 Score = 36.1 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 56 MRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFG 111 + I + L + + + KV+ + RG+E+ + + ++LS E Sbjct: 182 LHANIQTNHLGTCMASAFSQVAKSDKVRKYI-LRGKEVSRKHI--KVLSRYLEMCS 234 >gi|156549411|ref|XP_001602656.1| PREDICTED: similar to ENSANGP00000020034 [Nasonia vitripennis] Length = 179 Score = 36.1 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 7/96 (7%) Query: 2 QMAQEANLDLVEI---DSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRP 58 ++A L LV+I D+ + K++ ++ + E +KK+K +KE K+ Sbjct: 76 KLADRRKLKLVKILDFDTKSQKPLFKLMTSQEF-FEEGVKFKERKKKEKDAAVKEDKLFT 134 Query: 59 ---VIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGR 91 HDL +K+ I L+ +++I + G Sbjct: 135 ISTKTTEHDLYIKINQIMKLLKKKHEIRIFISKDGN 170 >gi|86134469|ref|ZP_01053051.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85821332|gb|EAQ42479.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 1035 Score = 36.1 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 8/93 (8%) Query: 33 YTIQKNAVEARKKQKSTGIK-------EVKMRPVID-LHDLQVKLKAIDGFLRDGCKVKI 84 Y +A++ Q+ T +K E M+ D ++D+ K+ I L++ KV+ Sbjct: 856 YKATLKLNDAQQSQQFTILKNPVSEATESDMKAQFDFINDINTKMTEIHKALKNVKKVRS 915 Query: 85 SVKFRGREIMHQDLGRELLSNIKERFGEISRID 117 V + I ++ ++L+ + +++ I+ Sbjct: 916 QVGLLKKSIADKEANKDLIDFADKLVKDMTTIE 948 >gi|170782925|ref|YP_001711259.1| bifunctional enzyme phytoene desaturase/synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169157495|emb|CAQ02686.1| bifunctional enzyme phytoene desaturase/synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 881 Score = 36.1 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 1 MQMAQEANLDLVE-IDSSVTPSVCKILDLRKLRYTIQKN 38 ++ ++EANLDL E ++ P++ + LD K Y + K Sbjct: 450 IRDSREANLDLFESVEPGSRPAMARYLDSAKDVYEVAKK 488 >gi|148274071|ref|YP_001223632.1| putative bifunctional phytoene synthase/phytoene dehydrogenase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832001|emb|CAN02973.1| putative bifunctional phytoene synthase/phytoene dehydrogenase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 881 Score = 36.1 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 1 MQMAQEANLDLVE-IDSSVTPSVCKILDLRKLRYTIQKN 38 ++ ++EANLDL E ++ P++ + LD K Y + K Sbjct: 450 IRDSREANLDLFESVEPGSRPAMARYLDSAKDVYEVAKK 488 >gi|194754197|ref|XP_001959382.1| GF12842 [Drosophila ananassae] gi|190620680|gb|EDV36204.1| GF12842 [Drosophila ananassae] Length = 243 Score = 35.7 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 40 VEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 + +K + K + + I HDL +LK I +L +V+I ++ Sbjct: 110 KSSNEKSQKKSEKSLTIGARITEHDLSSRLKNITKWLGKRHEVRILIQ 157 >gi|195485431|ref|XP_002091090.1| GE12431 [Drosophila yakuba] gi|194177191|gb|EDW90802.1| GE12431 [Drosophila yakuba] Length = 232 Score = 35.7 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 ++A E +++K+ K + + I HDL +LK I +L +V+I ++ Sbjct: 116 EQSRSASEKVREKKTE--KSLTIGARITEHDLSSRLKNIVKWLAKRHEVRILIQ 167 >gi|195056562|ref|XP_001995121.1| GH22807 [Drosophila grimshawi] gi|193899327|gb|EDV98193.1| GH22807 [Drosophila grimshawi] Length = 168 Score = 35.3 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%) Query: 39 AVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVK 87 A K K T K + + I HDL +LK I +L +V+I ++ Sbjct: 57 KSAAEKGSKKTTEKSLTIGARITDHDLASRLKNIAKWLHKRHEVRILIQ 105 >gi|325527813|gb|EGD05079.1| twitching motility protein [Burkholderia sp. TJI49] Length = 510 Score = 35.3 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRK 30 +++A+E LDLVE+ C I D + Sbjct: 462 LRLAKEFGLDLVEVA-------CAIDDYHR 484 >gi|161506549|ref|YP_001573670.1| type II secretion system protein E [Burkholderia multivorans ATCC 17616] gi|189348788|ref|YP_001941983.1| twitching motility protein [Burkholderia multivorans ATCC 17616] gi|160346787|gb|ABX19870.1| type II secretion system protein E [Burkholderia multivorans ATCC 17616] gi|189338926|dbj|BAG47993.1| twitching motility protein [Burkholderia multivorans ATCC 17616] Length = 500 Score = 35.3 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%) Query: 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRK 30 +++A+E LDLVE+ C I D + Sbjct: 452 LRLAKEFGLDLVEVA-------CAIDDYHR 474 >gi|163800439|ref|ZP_02194340.1| putative extracellular serine protease [Vibrio sp. AND4] gi|159175882|gb|EDP60676.1| putative extracellular serine protease [Vibrio sp. AND4] Length = 592 Score = 35.3 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 57 RPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLS---NIKER 109 P I +DL KL G G VK++V G +I H DL ++ N E Sbjct: 45 NPAIAGNDLNTKLTQAMGIAGVG--VKVAVIDSGVQIDHPDLAANVVEGSKNFIED 98 >gi|118411129|ref|YP_874523.1| DNA-directed RNA polymerase beta chain [Thalassiosira pseudonana] gi|125987645|sp|A0T0R1|RPOB_THAPS RecName: Full=DNA-directed RNA polymerase subunit beta; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta; Short=RNA polymerase subunit beta gi|116739876|gb|ABK20746.1| DNA-directed RNA polymerase beta chain [Thalassiosira pseudonana] Length = 1386 Score = 35.0 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 9/50 (18%) Query: 30 KLRYTIQKNAVEARKKQKSTGI-----KEVKMRPVIDLHDLQVKLKAIDG 74 K +Y K + ++ Q I K +K + I +Q K + Sbjct: 382 KFKYNFTKKEKDKKRNQSQATIFKNKTKYLKTKSKI----IQYKDDHLIR 427 >gi|331703517|ref|YP_004400204.1| hypothetical protein MLC_4980 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802072|emb|CBW54226.1| Conserved hypothetical protein, predicted transmembrane protein, DUF285 family [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 1306 Score = 35.0 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Query: 24 KILDLRKLRYTIQKNAVEARK-KQKSTGIKEVKMRPVIDLHDLQVKLKAIDGF 75 K++D K+ QK EARK K+ IKE+ D + KL + + Sbjct: 434 KLIDKHKIEIEKQKAEAEARKQKEIPNKIKEIW------DKDFKNKLNSAQKY 480 >gi|224015730|ref|XP_002297513.1| hypothetical protein THAPSDRAFT_bd1267 [Thalassiosira pseudonana CCMP1335] gi|220967777|gb|EED86153.1| hypothetical protein THAPSDRAFT_bd1267 [Thalassiosira pseudonana CCMP1335] Length = 1358 Score = 35.0 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 9/50 (18%) Query: 30 KLRYTIQKNAVEARKKQKSTGI-----KEVKMRPVIDLHDLQVKLKAIDG 74 K +Y K + ++ Q I K +K + I +Q K + Sbjct: 354 KFKYNFTKKEKDKKRNQSQATIFKNKTKYLKTKSKI----IQYKDDHLIR 399 >gi|84996651|ref|XP_953047.1| hypothetical protein [Theileria annulata] gi|65304043|emb|CAI76422.1| hypothetical protein TA08140 [Theileria annulata] Length = 427 Score = 35.0 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%) Query: 41 EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGR 100 + +K ++ EV++ I DL K G + +++K G + Sbjct: 199 QRKKGKRVYEPIEVRLNIRIHESDLLTKCNFFKKKALKGYPLILTIKTDGNAKDYTLAAE 258 Query: 101 ELLSNIKERFGEISR 115 +L+ K G Sbjct: 259 GILNKAKIFLGNSCT 273 >gi|302875407|ref|YP_003844040.1| alpha-L-arabinofuranosidase domain-containing protein [Clostridium cellulovorans 743B] gi|307689004|ref|ZP_07631450.1| alpha-L-arabinofuranosidase domain-containing protein [Clostridium cellulovorans 743B] gi|302578264|gb|ADL52276.1| alpha-L-arabinofuranosidase domain protein [Clostridium cellulovorans 743B] Length = 1250 Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 8/58 (13%) Query: 70 KAIDGFLRDGCKVKISVKFR-GREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQ 126 K ++ G K ++ + G E + +LL+ E +++ ++ EG Sbjct: 457 KNCSMLIKKGDKYNFTIWAKAGSEGT---ITLQLLNKDNESVSDVATVE----VEGNN 507 >gi|118363720|ref|XP_001015084.1| ABC transporter family protein [Tetrahymena thermophila] gi|89296851|gb|EAR94839.1| ABC transporter family protein [Tetrahymena thermophila SB210] Length = 2778 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 32 RYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDG-FLRDGCKVKISV 86 ++ +K K+ KE+ + D D V++ + F+ ++K++V Sbjct: 1319 MFSKEKQVKYEPKEYDEDVQKEIDIINQTDPSDYTVRVNKLRKVFIPAKDRIKVAV 1374 >gi|253681186|ref|ZP_04861986.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] gi|253562608|gb|EES92057.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] Length = 199 Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 13/98 (13%) Query: 27 DLRKLRYTIQKNAV---EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVK 83 D +K Y ++ + + ++ I+E K+ I ++ + + ++ + KVK Sbjct: 47 DYKKFLYHKKRKKNKITDEKIEKAINMIEEHKISKKIIAQKYKISVPTLTKYINEK-KVK 105 Query: 84 ISVKFRGRE---------IMHQDLGRELLSNIKERFGE 112 +V F E + +DLG L + E GE Sbjct: 106 NTVNFNQSEINNLTNNNNMKAEDLGENLGKDSAEDLGE 143 >gi|291238292|ref|XP_002739067.1| PREDICTED: splicing factor 3a, subunit 1, 120kDa-like [Saccoglossus kowalevskii] Length = 798 Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%) Query: 25 ILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 ILD K R K RKKQ+ +E I+ HD V Sbjct: 220 ILDQGKHRVEWTKYEERQRKKQEEQKERERVAYSQIEWHDFVV 262 >gi|3695059|gb|AAC62624.1| rac GTPase activating protein 1 [Lotus japonicus] Length = 493 Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 14/32 (43%) Query: 102 LLSNIKERFGEISRIDCEPKFEGRQMIMILSS 133 LL ++++++ K R + M+ + Sbjct: 258 LLDWAINLMADVAQMEHFNKMNARNIAMVFAP 289 >gi|253682268|ref|ZP_04863065.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] gi|253561980|gb|EES91432.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] Length = 195 Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 13/98 (13%) Query: 27 DLRKLRYTIQKNAV---EARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVK 83 D +K Y ++ + + ++ I+E K+ I ++ + + ++ + KVK Sbjct: 47 DYKKFLYHKKRKKNKITDEKIEKAINMIEEHKISKKIIAQKYKISVPTLTKYINEK-KVK 105 Query: 84 ISVKFRGRE---------IMHQDLGRELLSNIKERFGE 112 +V F E + +DLG L + E GE Sbjct: 106 NTVNFNQSEINNLTNNNNMKAEDLGENLGKDSAEDLGE 143 >gi|77165595|ref|YP_344120.1| cation transporting ATPase, E1-E2 type [Nitrosococcus oceani ATCC 19707] gi|254434591|ref|ZP_05048099.1| ATPase, P-type, HAD superfamily, subfamily IC, putative [Nitrosococcus oceani AFC27] gi|76883909|gb|ABA58590.1| Cation transporting ATPase, E1-E2 type [Nitrosococcus oceani ATCC 19707] gi|207090924|gb|EDZ68195.1| ATPase, P-type, HAD superfamily, subfamily IC, putative [Nitrosococcus oceani AFC27] Length = 884 Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 10/73 (13%) Query: 64 DLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFE 123 D L+ + G +V +++ +R E + + E+L G ++ ID P+ E Sbjct: 471 DRGTLLREAERLAEQGYRV-LAMAYRFLENIPTEWAPEILEKDLVFLGLVALID-PPRKE 528 Query: 124 GRQMIMILSSKCV 136 + + V Sbjct: 529 --------APRAV 533 >gi|300776618|ref|ZP_07086476.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300502128|gb|EFK33268.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 320 Score = 34.6 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 4/73 (5%) Query: 14 IDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAID 73 I + P KI+D + L+Y +KN + + + HD K + Sbjct: 77 ILRNGIPREAKIIDYKLLKYIAKKNMNLIQVTLSFPNLSNTVIEHKTMFHD----SKPYE 132 Query: 74 GFLRDGCKVKISV 86 G KVK+ + Sbjct: 133 KRFDAGNKVKVLL 145 >gi|300866265|ref|ZP_07110976.1| two component LuxR family transcriptional regulator [Oscillatoria sp. PCC 6506] gi|300335736|emb|CBN56136.1| two component LuxR family transcriptional regulator [Oscillatoria sp. PCC 6506] Length = 215 Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRID-CEPKFEG 124 VK ++FRG +++ + GRE L ++E ++ D P+ +G Sbjct: 25 VKDYLEFRGYDVVTAENGREALEKLEEDLPDLIICDVMMPEMDG 68 >gi|320580318|gb|EFW94541.1| hypothetical protein HPODL_4041 [Pichia angusta DL-1] Length = 292 Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 38 NAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA-IDGFLRDGCKVKISV 86 + +QK +K V++ I HDL + + ++ ++ G +V+I + Sbjct: 134 KQQKQENRQKEPDVKMVRVSWQITPHDLTSQKRHEVETQVKKGERVRIVI 183 >gi|170106129|ref|XP_001884276.1| predicted protein [Laccaria bicolor S238N-H82] gi|164640622|gb|EDR04886.1| predicted protein [Laccaria bicolor S238N-H82] Length = 265 Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 12 VEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKA 71 VE+ S TP + KI D +++ + K KE+++ D+ KL Sbjct: 88 VELVSE-TPVLVKIYDRAEMKLRHLARKARVKVSAKRNQRKEIQLTWNTQPGDMAHKLAK 146 Query: 72 IDGFLRDGCKV 82 + L GC+V Sbjct: 147 VREELEKGCRV 157 >gi|332023650|gb|EGI63878.1| Zinc finger protein 569 [Acromyrmex echinatior] Length = 856 Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%) Query: 23 CKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDG 79 CKI +L K + Q+ A R ++++ +E++M D D Q + + + + DG Sbjct: 79 CKIRELWKHQVEQQRKAEHLRNRKENVEFEEMEMDTATDNQDDQYEQQMVIKIMPDG 135 >gi|326496803|dbj|BAJ98428.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 434 Score = 34.2 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 65 LQVKLKAIDGFLRDGCKVKISVKF--RGREIMHQDLGRELLSNIKER 109 V + + DG K+KI + F GRE++ +L LL + E+ Sbjct: 83 FVVTFNHVKKTIADGSKIKILLSFGQHGRELITSELALSLLYILTEK 129 >gi|269104446|ref|ZP_06157142.1| transcriptional regulator MerR family protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161086|gb|EEZ39583.1| transcriptional regulator MerR family protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 273 Score = 34.2 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Query: 62 LHDLQVKLKAIDGFLRDG---CKVKISVKFRG--REIMHQDLGRELLSNIKERFGEISRI 116 HD VK++ I +L+ G KVK ++ +G RE + EL+ ++ Sbjct: 50 THDDIVKIRQIVSWLKKGVSIGKVKPLLETQGQAREQATTEFHHELIDSMMAEVE----- 104 Query: 117 DCEPKFEGRQMIMIL 131 K +G ++ IL Sbjct: 105 ----KLDGHKLSKIL 115 >gi|330919094|ref|XP_003298470.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1] gi|311328291|gb|EFQ93424.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1] Length = 1306 Score = 34.2 bits (78), Expect = 6.9, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Query: 32 RYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGF---LRDGCKVKISVKF 88 +Y QK E + +Q+ IKE R I D + K + F L + + Sbjct: 350 KYEAQKEQHERQMQQRENTIKEAAKRHAIRGFDYDITEKQVPEFQQILSKMSRDQNRALE 409 Query: 89 RGREIMHQDL--GRELLSNI 106 R RE +DL +ELL+ + Sbjct: 410 RAREETQRDLRDAQELLNKL 429 >gi|50293223|ref|XP_449023.1| hypothetical protein [Candida glabrata CBS 138] gi|74608681|sp|Q6FL71|AIM23_CANGA RecName: Full=Altered inheritance of mitochondria protein 23, mitochondrial; Flags: Precursor gi|49528336|emb|CAG61993.1| unnamed protein product [Candida glabrata] Length = 336 Score = 33.8 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 54/163 (33%) Query: 21 SVCKILD----LRKL-RYTIQKNAVEARK------------KQKSTGIKEVKMRPVIDLH 63 K++D L+K Y +K E + K +K +K+ I Sbjct: 142 PFVKLVDTKTALKKYSDYLAEKKEEELKSMGLLPRKFFENSKTNEDNLKHIKISWSIKED 201 Query: 64 DL-QVKLKAIDGFLRDGCKVKISV---------------------------KFRGREIMH 95 DL + K I L+ G KV + + + R EI Sbjct: 202 DLAKQKAHDITSMLKKGNKVNLYIADKEDLGGSKWMENFENVEEEKPPSKKRLRPSEIER 261 Query: 96 QDLGRELLSNIKERFGEISRIDCEPKFEGR---QMIMILSSKC 135 ++ ++ +K +IS +P EGR +MI+ L+ K Sbjct: 262 RES---IIEQLKLLVSDIST---DPIIEGRANGKMIIRLTPKV 298 >gi|253723032|pdb|1OIS|A Chain A, Yeast Dna Topoisomerase I, N-Terminal Fragment Length = 223 Score = 33.8 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Query: 27 DLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISV 86 D K + + E +K+ S K++++ D + KV+ Sbjct: 93 DFTK-MFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQVGNFKVEPPD 151 Query: 87 KFRGREIMHQDLGR 100 FRGR H G+ Sbjct: 152 LFRGR-GAHPKTGK 164 >gi|159037489|ref|YP_001536742.1| response regulator receiver modulated diguanylate cyclase [Salinispora arenicola CNS-205] gi|157916324|gb|ABV97751.1| response regulator receiver modulated diguanylate cyclase [Salinispora arenicola CNS-205] Length = 326 Score = 33.8 bits (77), Expect = 7.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 82 VKISVKFRGREIMHQDLGRELLSNIKERFGEISRID-CEPKFEG 124 V+ +++ G E++H G+E L I + +++ +D P+ +G Sbjct: 24 VEFNLRLHGYEVIHARDGQEALEVIAQHRPDLAVVDLMMPRVDG 67 >gi|326665208|ref|XP_002660960.2| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25 [Danio rerio] Length = 885 Score = 33.8 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 34 TIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREI 93 + E + ++ + +K K + D + + ++ + +++ R RE Sbjct: 553 QQKIQEREKKIQELNESVKTHKSSAQTAVDDSERIFTELIQYIEKR-RSEVTQMIRDREK 611 Query: 94 MHQDLGRELLSNIKERFGEI 113 LL +++ ++ Sbjct: 612 TEVSRAEGLLKKLEQEIEDM 631 >gi|146166023|ref|XP_001470787.1| hypothetical protein TTHERM_00266649 [Tetrahymena thermophila] gi|146145314|gb|EDK31723.1| hypothetical protein TTHERM_00266649 [Tetrahymena thermophila SB210] Length = 1283 Score = 33.8 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 12/105 (11%) Query: 15 DSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDG 74 + P V I K + + + + KQ + + D + +KL+ I Sbjct: 959 NDQAEPYVTHI----KFDFNDKSQFPQFQNKQIIINKGGINLIFDQDENQNTIKLRQIRL 1014 Query: 75 FLRDG-----CKVKISVKFRGREIMHQDLGRELL--SNIKERFGE 112 F++ G + KI + F G E++ G+++L + I E E Sbjct: 1015 FMKMGENNRSNQEKIPLHFYG-ELVKTKQGQKMLMENKIIENCFE 1058 >gi|327268563|ref|XP_003219066.1| PREDICTED: protein dopey-2-like [Anolis carolinensis] Length = 2057 Score = 33.8 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 4 AQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVI 60 A + DL+E P +I+DL KL+Y Q N E + K S + ++ I Sbjct: 1942 AYSMSSDLMENHQECKPHAVRIMDLLKLKYGEQ-NTNERKTKHHSFPLLDLHSISNI 1997 >gi|301623933|ref|XP_002941268.1| PREDICTED: hypothetical protein LOC100487273 [Xenopus (Silurana) tropicalis] Length = 1179 Score = 33.8 bits (77), Expect = 9.0, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 11/84 (13%) Query: 35 IQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIM 94 QK EA KK+ I + KLK + G + + +E + Sbjct: 640 KQKREKEAIKKKLQEEI-----ELRTEE-----KLKQ-KREMESGDQSAQRIPPEAKEAI 688 Query: 95 HQDLGRELLSNIKERFGEISRIDC 118 + L + + +KE+ ++ Sbjct: 689 KKKLQKVIKRKMKEKLKGKGEMES 712 >gi|328712641|ref|XP_001944050.2| PREDICTED: splicing factor 3A subunit 1-like [Acyrthosiphon pisum] Length = 753 Score = 33.4 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 21/44 (47%) Query: 24 KILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQV 67 KILD K R QK+ R+K++ KE ID HD V Sbjct: 208 KILDDVKYRAEWQKHQDALRRKEEQLIEKERLAYSQIDWHDFVV 251 >gi|330507176|ref|YP_004383604.1| chaperone protein DnaK [Methanosaeta concilii GP-6] gi|328927984|gb|AEB67786.1| chaperone protein DnaK [Methanosaeta concilii GP-6] Length = 622 Score = 33.4 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 14/89 (15%) Query: 38 NAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQD 97 + +K+Q+ T + + D+ K+K + F D K R EI ++ Sbjct: 464 KDLATKKEQRIT----ITAPHKLSQEDIDAKIKDAERFAADDLK-------RKEEIEVKN 512 Query: 98 LGRELL---SNIKERFGEISRIDCEPKFE 123 L+ + + G+I+ + + K E Sbjct: 513 AAESLIYASEKMLKEAGDIATSEQKEKIE 541 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.186 0.632 Lambda K H 0.267 0.0569 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,369,365,689 Number of Sequences: 14124377 Number of extensions: 179363828 Number of successful extensions: 629852 Number of sequences better than 10.0: 2388 Number of HSP's better than 10.0 without gapping: 4165 Number of HSP's successfully gapped in prelim test: 298 Number of HSP's that attempted gapping in prelim test: 623464 Number of HSP's gapped (non-prelim): 5116 length of query: 136 length of database: 4,842,793,630 effective HSP length: 101 effective length of query: 35 effective length of database: 3,416,231,553 effective search space: 119568104355 effective search space used: 119568104355 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 77 (33.8 bits)