HHsearch alignment for GI: 254780321 and conserved domain: CHL00189

>CHL00189 infB translation initiation factor 2; Provisional.
Probab=100.00  E-value=2.7e-44  Score=316.91  Aligned_cols=426  Identities=19%  Similarity=0.265  Sum_probs=273.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf             79998013898778899999982980544443113058677987195052327999974378843899996178730027
Q gi|254780321|r   13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFT   92 (606)
Q Consensus        13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~   92 (606)
T Consensus       274 VVTIMGHVDHGKTsLLD~iR-~t~-Va~~EaG-------------GITQhIGAy~V~~~~~-~~~~~ITFlDTPGHeAFt  337 (770)
T CHL00189        274 IVTILGHVDHGKTTLLDAIR-KTN-IAQKEAG-------------GITQKIGAYEVEVPYK-DQNQKIVFLDTPGHEAFS  337 (770)
T ss_pred             EEEEECCCCCCHHHHHHHHH-CCC-CCCCCCC-------------CCCCEECEEEEEECCC-CCCCEEEEECCCCHHHHH
T ss_conf             89985772577203788885-288-5134567-------------6555035299975157-889758995599468899


Q ss_pred             HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH------HH
Q ss_conf             999999973026899998687886558999999997099679983267887532113388877555322321------00
Q gi|254780321|r   93 YEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTED------AL  166 (606)
Q Consensus        93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~------ii  166 (606)
T Consensus       338 ~MRaRGA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VPiIVAINKiDkp~an~~rVk~eL~e~-gli~EewGGd~~~V  416 (770)
T CHL00189        338 SMRSRGANVTDIAILIVAADDGVKPQTIEAINHIQAANVPIIVAINKIDKENANIDRVKQELSKY-NLISEKWGGQTPMI  416 (770)
T ss_pred             HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC-CCCHHHCCCCEEEE
T ss_conf             99862786666799999657885672799999998769988999877458998857899999986-95522237955999


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCC-CCCC
Q ss_conf             011100223200678776321000111122012331012101147572599998169873558458873355642-1012
Q gi|254780321|r  167 LVSAKTGEGIPLLLERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAKY-QVER  245 (606)
Q Consensus       167 ~vSAktG~GV~~LLd~Iv~~iP~P~~~~~~~~Pl~alVfds~~D~~~G~I~~~RV~sG~lk~Gd~I~~~~~g~~~-~v~~  245 (606)
T Consensus       417 ~ISAktg~gId~LLE~IlL~AEvlELkAnp~~~A~GvVIES~ldkgrG~VATvLVQ~GTLkvGD~iVa---G~~~GKVRa  493 (770)
T CHL00189        417 PISALQGTNIDKLLEMILLLAEIENLQADPTQLAQGTILEAHLDKTKGPVATLLVQNGTLRIGDIIVA---GTSLGKIRG  493 (770)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEECCCCEEEE---CCCEEEEEE
T ss_conf             96616798879999999999878752368898614999997651686776899995484403999998---363447889


Q ss_pred             CCCCCCCEEEEHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCC-CC------------------CCC----CC-CCC
Q ss_conf             2233554124010124712332201100244445420004667853-23------------------645----52-222
Q gi|254780321|r  246 IGILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTT-SA------------------LPG----FK-PIQ  301 (606)
Q Consensus       246 ig~~~~~~~~v~~l~aGdVG~ii~gik~l~~~~vGDTl~~~~~p~~-~~------------------Lp~----~~-~~~  301 (606)
T Consensus       494 M--~Dd~Gk~vkeA~PS~PV-eIlGl~~vP--~AGD~f~vv~sEk~Ak~ia~~r~~~~~~~~~~~~sl~~l~~~~~e~~~  568 (770)
T CHL00189        494 M--INSAGNKINEAGPSSPV-EIWGLSSVP--ATGEYFQVVNSEKEAKLKVIENPESNQKQTTSRITLDTPKTINSEDEK  568 (770)
T ss_pred             E--ECCCCCCCCCCCCCCCE-EEECCCCCC--CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf             8--89999844554899868-987787898--779889993799999999999999999977521265559878632774


Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC--------------CCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf             12664212677024578899998886411221112--------------5676000420289963767898889888664
Q gi|254780321|r  302 PVVFCGLFPVDATQFENLRTAINKLRLNDASFSFE--------------LENSTALGFGFRCGFLGLLHLEIIQERLERE  367 (606)
Q Consensus       302 P~v~~~i~p~~~~d~~~L~~aL~kL~~~D~sl~~e--------------~Ets~aLg~Gfr~gglG~LHLeVi~eRL~rE  367 (606)
T Consensus       569 k~LnlIIKADvqGSlEAI~~sL~kl~~~eV~v~II~sgVG~ITESDV~LA~aS~AiIIGFNVr----~~~-~ak~~Ae~~  643 (770)
T CHL00189        569 KQLNLIIKTDTQGSIEAILNSLSQIPQKKVQLNVLYSSPGEITETDVDLASTTNALIIAFNTN----LAP-GAKKAARKL  643 (770)
T ss_pred             EEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCC----CCH-HHHHHHHHC
T ss_conf             076499991775309999999970898858999998321577663676765049889996279----897-899999975


Q ss_pred             CCCEEEEECCCCCEEEEEECCCEEECCCHHHCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCC--
Q ss_conf             495069737823303353156454126966625867788862326999998083100038999886300142443368--
Q gi|254780321|r  368 FSLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITPNEYLGSILKLCQERRGIQIDMSHLD--  445 (606)
Q Consensus       368 fg~ev~~t~P~V~Ykv~~~dG~~~~Vd~p~~~p~~~~i~~i~EPi~~~~I~~P~ey~G~Vm~~l~~RRG~~~~m~~~~--  445 (606)
T Consensus       644 -gV~Ir~y--~IIY~Li--Ddv------------k~~m~glL~P~~~E~~iG~AeV-r~vF---~isKg~IAGc~Vt~G~  702 (770)
T CHL00189        644 -NVDIREY--DVIYDLV--EDI------------EYSMEDLLDPEYDKVPIGEAEV-QTVF---SLAKSFVAGCRVTSGK  702 (770)
T ss_pred             -CCEEEEE--CCHHHHH--HHH------------HHHHHCCCCCEEEEEEEEEEEE-EEEE---ECCCCEEEEEEEEECE
T ss_conf             -9748991--6088899--999------------9998457997068999899999-9999---5289669899998178


Q ss_pred             ----CEE------EEEEEECHHHHHHHHHHHHHHHCCCE--EEEEEEECCCEECCEE
Q ss_conf             ----369------99999604333220468767635741--8889854354643667
Q gi|254780321|r  446 ----NRA------MIVYELPLNEVIFDFYDRLKSVSKGY--ASFDYNVIDYRDSDLV  490 (606)
Q Consensus       446 ----~~~------~i~~~vPl~Eli~~f~~~LkS~T~G~--as~~ye~~~Y~~~dlv  490 (606)
T Consensus       703 I~r~~~vRViR~~~vI~eG~I~SL-KRfKddVkEV~~G~ECGI~l~~fnDik~GDiI  758 (770)
T CHL00189        703 ILKNAHIKVIRKNKLIFEGDINSL-KRVKEDVEEVQEGNECGIFIEEFQLWQSGDKI  758 (770)
T ss_pred             EECCCCEEEEECCEEEEEEEEHHH-HCCCCCCCHHCCCCCCEEECCCCCCCCCCCEE
T ss_conf             963992799769989998076775-00320202315994153770483437779899