HHsearch alignment for GI: 254780321 and conserved domain: CHL00189
>CHL00189 infB translation initiation factor 2; Provisional.
Probab=100.00 E-value=2.7e-44 Score=316.91 Aligned_cols=426 Identities=19% Similarity=0.265 Sum_probs=273.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf 79998013898778899999982980544443113058677987195052327999974378843899996178730027
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFT 92 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~ 92 (606)
T Consensus 274 VVTIMGHVDHGKTsLLD~iR-~t~-Va~~EaG-------------GITQhIGAy~V~~~~~-~~~~~ITFlDTPGHeAFt 337 (770)
T CHL00189 274 IVTILGHVDHGKTTLLDAIR-KTN-IAQKEAG-------------GITQKIGAYEVEVPYK-DQNQKIVFLDTPGHEAFS 337 (770)
T ss_pred EEEEECCCCCCHHHHHHHHH-CCC-CCCCCCC-------------CCCCEECEEEEEECCC-CCCCEEEEECCCCHHHHH
T ss_conf 89985772577203788885-288-5134567-------------6555035299975157-889758995599468899
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH------HH
Q ss_conf 999999973026899998687886558999999997099679983267887532113388877555322321------00
Q gi|254780321|r 93 YEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTED------AL 166 (606)
Q Consensus 93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~------ii 166 (606)
T Consensus 338 ~MRaRGA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VPiIVAINKiDkp~an~~rVk~eL~e~-gli~EewGGd~~~V 416 (770)
T CHL00189 338 SMRSRGANVTDIAILIVAADDGVKPQTIEAINHIQAANVPIIVAINKIDKENANIDRVKQELSKY-NLISEKWGGQTPMI 416 (770)
T ss_pred HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC-CCCHHHCCCCEEEE
T ss_conf 99862786666799999657885672799999998769988999877458998857899999986-95522237955999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCC-CCCC
Q ss_conf 011100223200678776321000111122012331012101147572599998169873558458873355642-1012
Q gi|254780321|r 167 LVSAKTGEGIPLLLERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAKY-QVER 245 (606)
Q Consensus 167 ~vSAktG~GV~~LLd~Iv~~iP~P~~~~~~~~Pl~alVfds~~D~~~G~I~~~RV~sG~lk~Gd~I~~~~~g~~~-~v~~ 245 (606)
T Consensus 417 ~ISAktg~gId~LLE~IlL~AEvlELkAnp~~~A~GvVIES~ldkgrG~VATvLVQ~GTLkvGD~iVa---G~~~GKVRa 493 (770)
T CHL00189 417 PISALQGTNIDKLLEMILLLAEIENLQADPTQLAQGTILEAHLDKTKGPVATLLVQNGTLRIGDIIVA---GTSLGKIRG 493 (770)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEECCCCEEEE---CCCEEEEEE
T ss_conf 96616798879999999999878752368898614999997651686776899995484403999998---363447889
Q ss_pred CCCCCCCEEEEHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCC-CC------------------CCC----CC-CCC
Q ss_conf 2233554124010124712332201100244445420004667853-23------------------645----52-222
Q gi|254780321|r 246 IGILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTT-SA------------------LPG----FK-PIQ 301 (606)
Q Consensus 246 ig~~~~~~~~v~~l~aGdVG~ii~gik~l~~~~vGDTl~~~~~p~~-~~------------------Lp~----~~-~~~ 301 (606)
T Consensus 494 M--~Dd~Gk~vkeA~PS~PV-eIlGl~~vP--~AGD~f~vv~sEk~Ak~ia~~r~~~~~~~~~~~~sl~~l~~~~~e~~~ 568 (770)
T CHL00189 494 M--INSAGNKINEAGPSSPV-EIWGLSSVP--ATGEYFQVVNSEKEAKLKVIENPESNQKQTTSRITLDTPKTINSEDEK 568 (770)
T ss_pred E--ECCCCCCCCCCCCCCCE-EEECCCCCC--CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 8--89999844554899868-987787898--779889993799999999999999999977521265559878632774
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC--------------CCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 12664212677024578899998886411221112--------------5676000420289963767898889888664
Q gi|254780321|r 302 PVVFCGLFPVDATQFENLRTAINKLRLNDASFSFE--------------LENSTALGFGFRCGFLGLLHLEIIQERLERE 367 (606)
Q Consensus 302 P~v~~~i~p~~~~d~~~L~~aL~kL~~~D~sl~~e--------------~Ets~aLg~Gfr~gglG~LHLeVi~eRL~rE 367 (606)
T Consensus 569 k~LnlIIKADvqGSlEAI~~sL~kl~~~eV~v~II~sgVG~ITESDV~LA~aS~AiIIGFNVr----~~~-~ak~~Ae~~ 643 (770)
T CHL00189 569 KQLNLIIKTDTQGSIEAILNSLSQIPQKKVQLNVLYSSPGEITETDVDLASTTNALIIAFNTN----LAP-GAKKAARKL 643 (770)
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCC----CCH-HHHHHHHHC
T ss_conf 076499991775309999999970898858999998321577663676765049889996279----897-899999975
Q ss_pred CCCEEEEECCCCCEEEEEECCCEEECCCHHHCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCC--
Q ss_conf 495069737823303353156454126966625867788862326999998083100038999886300142443368--
Q gi|254780321|r 368 FSLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITPNEYLGSILKLCQERRGIQIDMSHLD-- 445 (606)
Q Consensus 368 fg~ev~~t~P~V~Ykv~~~dG~~~~Vd~p~~~p~~~~i~~i~EPi~~~~I~~P~ey~G~Vm~~l~~RRG~~~~m~~~~-- 445 (606)
T Consensus 644 -gV~Ir~y--~IIY~Li--Ddv------------k~~m~glL~P~~~E~~iG~AeV-r~vF---~isKg~IAGc~Vt~G~ 702 (770)
T CHL00189 644 -NVDIREY--DVIYDLV--EDI------------EYSMEDLLDPEYDKVPIGEAEV-QTVF---SLAKSFVAGCRVTSGK 702 (770)
T ss_pred -CCEEEEE--CCHHHHH--HHH------------HHHHHCCCCCEEEEEEEEEEEE-EEEE---ECCCCEEEEEEEEECE
T ss_conf -9748991--6088899--999------------9998457997068999899999-9999---5289669899998178
Q ss_pred ----CEE------EEEEEECHHHHHHHHHHHHHHHCCCE--EEEEEEECCCEECCEE
Q ss_conf ----369------99999604333220468767635741--8889854354643667
Q gi|254780321|r 446 ----NRA------MIVYELPLNEVIFDFYDRLKSVSKGY--ASFDYNVIDYRDSDLV 490 (606)
Q Consensus 446 ----~~~------~i~~~vPl~Eli~~f~~~LkS~T~G~--as~~ye~~~Y~~~dlv 490 (606)
T Consensus 703 I~r~~~vRViR~~~vI~eG~I~SL-KRfKddVkEV~~G~ECGI~l~~fnDik~GDiI 758 (770)
T CHL00189 703 ILKNAHIKVIRKNKLIFEGDINSL-KRVKEDVEEVQEGNECGIFIEEFQLWQSGDKI 758 (770)
T ss_pred EECCCCEEEEECCEEEEEEEEHHH-HCCCCCCCHHCCCCCCEEECCCCCCCCCCCEE
T ss_conf 963992799769989998076775-00320202315994153770483437779899