HHsearch alignment for GI: 254780321 and conserved domain: COG2262
>COG2262 HflX GTPases [General function prediction only].
Probab=98.87 E-value=3.8e-08 Score=74.16 Aligned_cols=154 Identities=29% Similarity=0.388 Sum_probs=93.7
Q ss_pred HCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCC
Q ss_conf 53179998013898778899999982980544443113058677987195052327999974378843899996178730
Q gi|254780321|r 10 RIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHV 89 (606)
Q Consensus 10 ~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~ 89 (606)
T Consensus 191 ~~p~vaLvGYTNAGKSTL~N~L---T~~~~~--~~d~LFATLd----------pttR~~~l--~~g--~~vlLtDTVGFI 251 (411)
T COG2262 191 GIPLVALVGYTNAGKSTLFNAL---TGADVY--VADQLFATLD----------PTTRRIEL--GDG--RKVLLTDTVGFI 251 (411)
T ss_pred CCCEEEEEEECCCCHHHHHHHH---HCCCEE--CCCCCCCCCC----------CCEEEEEE--CCC--CEEEEECCCCCC
T ss_conf 9975898732344499999887---245713--0466642105----------74048980--799--649986575671
Q ss_pred H---------HHHHHHHHHHHCCEEEEEEECCCC-CCHHHHHHHHHHHHC---CCCEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 0---------279999999730268999986878-865589999999970---996799832678875321133888775
Q gi|254780321|r 90 D---------FTYEVSRSLSACEGSLLVVDATQG-VEAQTLANVYQAIDN---NHEIITVLNKADLPSADPDRVKKQIEE 156 (606)
Q Consensus 90 D---------F~~EV~r~l~a~dgaiLvVdA~~G-vq~QT~~~~~~A~~~---~l~~I~viNKiD~~~A~~e~v~~ei~~ 156 (606)
T Consensus 252 ~~LP~~LV~AFksTLEE-~~~aDlllhVVDaSdp~~~~~~~~v~~vL~el~~~~~p~i~v~NKiD~~~~~-~-~~~~~~~ 328 (411)
T COG2262 252 RDLPHPLVEAFKSTLEE-VKEADLLLHVVDASDPEILEKLEAVEDVLAEIGADEIPIILVLNKIDLLEDE-E-ILAELER 328 (411)
T ss_pred CCCCHHHHHHHHHHHHH-HHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH-H-HHHHHHH
T ss_conf 55986799999998987-6227779997406885189999999999997488999789997641015732-2-2345663
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 553223210001110022320067877632100
Q gi|254780321|r 157 TIGISTEDALLVSAKTGEGIPLLLERIVQQLPS 189 (606)
Q Consensus 157 ~~g~~~~~ii~vSAktG~GV~~LLd~Iv~~iP~ 189 (606)
T Consensus 329 ~~---~-~~v~iSA~~~~gl~~L~~~i~~~l~~ 357 (411)
T COG2262 329 GS---P-NPVFISAKTGEGLDLLRERIIELLSG 357 (411)
T ss_pred CC---C-CEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 48---9-74899806675989999999998631