HHsearch alignment for GI: 254780321 and conserved domain: KOG4252

>KOG4252 consensus.
Probab=97.68  E-value=0.00035  Score=47.56  Aligned_cols=168  Identities=21%  Similarity=0.232  Sum_probs=106.1

Q ss_pred             CCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEE-ECCCHHHHHHCCEEEEEEEEEEEECCCCCEEE
Q ss_conf             98889985253179998013898778899999982980544443113-05867798719505232799997437884389
Q gi|254780321|r    1 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQV-LDNMDIERERGITIKAQTVRLNYTSTDAKDYQ   79 (606)
Q Consensus         1 ~~~~~~p~~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~v-lD~~~~EreRGITIka~~~~~~~~~~~~~~y~   79 (606)
T Consensus        10 ~am~e~d~e~aiK~vivGng~VGKssmiqryC--kgifTkdy-kktIgvdfl--e--rqi~v------------~~Edvr   70 (246)
T KOG4252          10 MAMDETDYERAIKFVIVGNGSVGKSSMIQRYC--KGIFTKDY-KKTIGVDFL--E--RQIKV------------LIEDVR   70 (246)
T ss_pred             CCCCCHHHHHHEEEEEECCCCCCHHHHHHHHH--CCCCCCCC-CCCCCHHHH--H--HHHHH------------HHHHHH
T ss_conf             78880324553789998788624689999985--24455665-400032352--6--77774------------089999


Q ss_pred             EEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH---HHCCCCEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf             99961787300279999999730268999986878865589999999---970996799832678875321133888775
Q gi|254780321|r   80 LNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQA---IDNNHEIITVLNKADLPSADPDRVKKQIEE  156 (606)
Q Consensus        80 iNlIDTPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A---~~~~l~~I~viNKiD~~~A~~e~v~~ei~~  156 (606)
T Consensus        71 ~mlWdtagqeEfDaItkAyyrgaqa~vLVFSTTDr~SFea~~~w~~kv~~e~~~IPtV~vqNKIDlved-s~~~~~evE~  149 (246)
T KOG4252          71 SMLWDTAGQEEFDAITKAYYRGAQASVLVFSTTDRYSFEATLEWYNKVQKETERIPTVFVQNKIDLVED-SQMDKGEVEG  149 (246)
T ss_pred             HHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH-HHCCHHHHHH
T ss_conf             999872231667789998742564048998545177789999999999987556875876422005676-5213588899


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             55322321000111002232006787763210
Q gi|254780321|r  157 TIGISTEDALLVSAKTGEGIPLLLERIVQQLP  188 (606)
Q Consensus       157 ~~g~~~~~ii~vSAktG~GV~~LLd~Iv~~iP  188 (606)
T Consensus       150 lak~l~~RlyRtSvked~NV~~vF~YLaeK~~  181 (246)
T KOG4252         150 LAKKLHKRLYRTSVKEDFNVMHVFAYLAEKLT  181 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99986434321666654006779999999999