HHsearch alignment for GI: 254780321 and conserved domain: KOG4252
>KOG4252 consensus.
Probab=97.68 E-value=0.00035 Score=47.56 Aligned_cols=168 Identities=21% Similarity=0.232 Sum_probs=106.1
Q ss_pred CCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEE-ECCCHHHHHHCCEEEEEEEEEEEECCCCCEEE
Q ss_conf 98889985253179998013898778899999982980544443113-05867798719505232799997437884389
Q gi|254780321|r 1 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQV-LDNMDIERERGITIKAQTVRLNYTSTDAKDYQ 79 (606)
Q Consensus 1 ~~~~~~p~~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~v-lD~~~~EreRGITIka~~~~~~~~~~~~~~y~ 79 (606)
T Consensus 10 ~am~e~d~e~aiK~vivGng~VGKssmiqryC--kgifTkdy-kktIgvdfl--e--rqi~v------------~~Edvr 70 (246)
T KOG4252 10 MAMDETDYERAIKFVIVGNGSVGKSSMIQRYC--KGIFTKDY-KKTIGVDFL--E--RQIKV------------LIEDVR 70 (246)
T ss_pred CCCCCHHHHHHEEEEEECCCCCCHHHHHHHHH--CCCCCCCC-CCCCCHHHH--H--HHHHH------------HHHHHH
T ss_conf 78880324553789998788624689999985--24455665-400032352--6--77774------------089999
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH---HHCCCCEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 99961787300279999999730268999986878865589999999---970996799832678875321133888775
Q gi|254780321|r 80 LNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQA---IDNNHEIITVLNKADLPSADPDRVKKQIEE 156 (606)
Q Consensus 80 iNlIDTPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A---~~~~l~~I~viNKiD~~~A~~e~v~~ei~~ 156 (606)
T Consensus 71 ~mlWdtagqeEfDaItkAyyrgaqa~vLVFSTTDr~SFea~~~w~~kv~~e~~~IPtV~vqNKIDlved-s~~~~~evE~ 149 (246)
T KOG4252 71 SMLWDTAGQEEFDAITKAYYRGAQASVLVFSTTDRYSFEATLEWYNKVQKETERIPTVFVQNKIDLVED-SQMDKGEVEG 149 (246)
T ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH-HHCCHHHHHH
T ss_conf 999872231667789998742564048998545177789999999999987556875876422005676-5213588899
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 55322321000111002232006787763210
Q gi|254780321|r 157 TIGISTEDALLVSAKTGEGIPLLLERIVQQLP 188 (606)
Q Consensus 157 ~~g~~~~~ii~vSAktG~GV~~LLd~Iv~~iP 188 (606)
T Consensus 150 lak~l~~RlyRtSvked~NV~~vF~YLaeK~~ 181 (246)
T KOG4252 150 LAKKLHKRLYRTSVKEDFNVMHVFAYLAEKLT 181 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986434321666654006779999999999