HHsearch alignment for GI: 254780321 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=98.27 E-value=2.5e-06 Score=61.96 Aligned_cols=172 Identities=21% Similarity=0.185 Sum_probs=102.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCC---------CCC---CCCCCEEECCC---HHHHHHCCEEEEEEEEEEEEC---
Q ss_conf 317999801389877889999998298---------054---44431130586---779871950523279999743---
Q gi|254780321|r 11 IRNFSIVAHIDHGKSTLADRFIQHCRG---------LTE---REMSSQVLDNM---DIERERGITIKAQTVRLNYTS--- 72 (606)
Q Consensus 11 IRN~~IiaHvDhGKTTL~d~lL~~tg~---------i~~---~~~~~~vlD~~---~~EreRGITIka~~~~~~~~~--- 72 (606)
T Consensus 49 a~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~sgGaiLGDr~Rm~~~~~~~~~fiRs~~srg~lgg~~~ 128 (325)
T PRK09435 49 ALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTRTGGSILGDKTRMERLSRHPNAFIRPSPSSGTLGGVAR 128 (325)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCH
T ss_conf 25997427999868899999999999679858999978999988861010388887614799848840677888677335
Q ss_pred --------CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf --------788438999961787300279999999730268999986878865589999999970996799832678875
Q gi|254780321|r 73 --------TDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPS 144 (606)
Q Consensus 73 --------~~~~~y~iNlIDTPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~ 144 (606)
T Consensus 129 ~~~~~~~~~~a~g~d~i~iETvGvG--Q~e~~-v~~~~d~~~~~~~p~~GD~~Q~~----K~GImEiaDi~vVNKaDgd~ 201 (325)
T PRK09435 129 KTRETMLLCEAAGFDVILVETVGVG--QSETA-VAGMVDFFLLLQLPGAGDELQGI----KKGIMELADLIVINKADGDN 201 (325)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCC--HHHHH-HHHHCCEEEEEECCCCCCHHHHH----HHHHHHHCCEEEEECCCCCC
T ss_conf 4999999999779998999706777--14889-98742668888358876088998----86577504268997767556
Q ss_pred CC-CCCHHHHHHHHHHHHH-------HHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 32-1133888775553223-------210001110022320067877632100
Q gi|254780321|r 145 AD-PDRVKKQIEETIGIST-------EDALLVSAKTGEGIPLLLERIVQQLPS 189 (606)
Q Consensus 145 A~-~e~v~~ei~~~~g~~~-------~~ii~vSAktG~GV~~LLd~Iv~~iP~ 189 (606)
T Consensus 202 ~~~A~~t~~e~~~aL~l~~~~~~~W~ppVl~~SA~~g~GI~eL~~~I~~h~~~ 254 (325)
T PRK09435 202 HTAARRAAAEYRSALRLLRPKDPGWQPPVLTCSALEGEGIDELWQAIEDHRAA 254 (325)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 58999999999999860788789999998999815899879999999999999