HHsearch alignment for GI: 254780321 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=98.02 E-value=2.5e-05 Score=55.22 Aligned_cols=154 Identities=21% Similarity=0.265 Sum_probs=83.6
Q ss_pred HHCEEEEEECCCCCCHHHHHHHHHHHCCC-CCCC-CCCCEEECCCHHHH--HHCCEEEEEEEEEEE--------------
Q ss_conf 25317999801389877889999998298-0544-44311305867798--719505232799997--------------
Q gi|254780321|r 9 SRIRNFSIVAHIDHGKSTLADRFIQHCRG-LTER-EMSSQVLDNMDIER--ERGITIKAQTVRLNY-------------- 70 (606)
Q Consensus 9 ~~IRN~~IiaHvDhGKTTL~d~lL~~tg~-i~~~-~~~~~vlD~~~~Er--eRGITIka~~~~~~~-------------- 70 (606)
T Consensus 102 ~gv~~lNl~sSPGSGKTtLLe~ti~~L~~~~~~aVIeGD~~-T~~DA~RI~~~Gv~a----vQInTG~~CHLDA~MV~~a 176 (290)
T PRK10463 102 RKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQ-TVNDAARIRATGTPA----IQVNTGKGCHLDAQMIADA 176 (290)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC-CHHHHHHHHHCCCCE----EEECCCCCCCCCHHHHHHH
T ss_conf 79189993069987889999999998733675799960423-566799999769958----9954799767599999999
Q ss_pred -ECCCCCEEEEEEEE------CCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHH--HHHHHHHCCCCEEEEECCCC
Q ss_conf -43788438999961------7873002799999997302689999868788655899--99999970996799832678
Q gi|254780321|r 71 -TSTDAKDYQLNLID------TPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLA--NVYQAIDNNHEIITVLNKAD 141 (606)
Q Consensus 71 -~~~~~~~y~iNlID------TPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~--~~~~A~~~~l~~I~viNKiD 141 (606)
T Consensus 177 l~~l~l~~~dllfIENVGNLVCPA~FDLGE---------~~kVvvlSVtEGeDKPlKYP~mF~~a------d~vlinKiD 241 (290)
T PRK10463 177 APRLPLDDNGILFIENVGNLVCPASFDLGE---------KHKVAVLSVTEGEDKPLKYPHMFAAA------SLMLLNKVD 241 (290)
T ss_pred HHHCCCCCCCEEEEECCCCCCCCCCCCCCC---------CEEEEEEEECCCCCCCCCCHHHHHHC------CEEEEEHHH
T ss_conf 984898779899981278843551203677---------61799997068888644476676425------789986565
Q ss_pred CC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 87---53211338887755532232100011100223200678776
Q gi|254780321|r 142 LP---SADPDRVKKQIEETIGISTEDALLVSAKTGEGIPLLLERIV 184 (606)
Q Consensus 142 ~~---~A~~e~v~~ei~~~~g~~~~~ii~vSAktG~GV~~LLd~Iv 184 (606)
T Consensus 242 Llp~~dFD~~~~~~~~~~vN--p~~~v~~vSa~tGeGld~W~~WL~ 285 (290)
T PRK10463 242 LLPYLNFDVEKCIACAREVN--PEIEIILISATSGEGMDQWLNWLE 285 (290)
T ss_pred HHHHCCCCHHHHHHHHHHHC--CCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 12202889999999999869--898589975688878999999999