HHsearch alignment for GI: 254780321 and conserved domain: PTZ00132
>PTZ00132 GTP-binding nuclear protein; Provisional.
Probab=99.42 E-value=5.3e-12 Score=100.07 Aligned_cols=154 Identities=18% Similarity=0.233 Sum_probs=101.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf 79998013898778899999982980544443113058677987195052327999974378843899996178730027
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFT 92 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~ 92 (606)
T Consensus 8 KIvllGd~~VGKTsLi~r~~--~~~F~~~y~-pTi----------g~d~~~--~~~---~~~~~~i~l~IwDTaGqe~f~ 69 (209)
T PTZ00132 8 KLILVGDGGVGKTTFVKRHL--TGEFEKKYI-ATL----------GVEVHP--LKF---YTNRGKICFNVWDTAGQEKFG 69 (209)
T ss_pred EEEEECCCCCCHHHHHHHHH--HCCCCCCCC-CCC----------CEEEEE--EEE---EECCEEEEEEEEECCCCCCCC
T ss_conf 99999999967899999997--199699877-760----------279899--999---999999999999899974455
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHH---CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999973026899998687886558999999997---09967998326788753211338887755532232100011
Q gi|254780321|r 93 YEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAID---NNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLVS 169 (606)
Q Consensus 93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~---~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ii~vS 169 (606)
T Consensus 70 sl~~~yyr~a~~~ilVfDit~~~SF~~l~~W~~ei~~~~~~ipivLVGNK~DL~~r~---V~~~~~~~a~~~~~~f~EtS 146 (209)
T PTZ00132 70 GLRDGYYIKGQCAIIMFDVTSRITYKNVPNWHRDITRVCENIPIVLVGNKVDVKDRQ---VKAKQITFHRKKNLQYYDIS 146 (209)
T ss_pred CCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---CCHHHHHHHHHCCCEEEEEE
T ss_conf 665144248988999843788789999999999999868998789997623224135---57999999998799899972
Q ss_pred HHCCCCCCHHHHHHHHHH
Q ss_conf 100223200678776321
Q gi|254780321|r 170 AKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 170 AktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 147 AKtg~NV~e~F~~Lar~i 164 (209)
T PTZ00132 147 AKSNYNFEKPFLWLARRL 164 (209)
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 689939799999999998