HHsearch alignment for GI: 254780321 and conserved domain: TIGR00750

>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=98.19  E-value=6.7e-06  Score=59.09  Aligned_cols=172  Identities=20%  Similarity=0.255  Sum_probs=101.2

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHC---C----C--CCCC---C----CCCEE-ECCCH----HHHHHCCEEEEEEEEEEE
Q ss_conf             179998013898778899999982---9----8--0544---4----43113-05867----798719505232799997
Q gi|254780321|r   12 RNFSIVAHIDHGKSTLADRFIQHC---R----G--LTER---E----MSSQV-LDNMD----IERERGITIKAQTVRLNY   70 (606)
Q Consensus        12 RN~~IiaHvDhGKTTL~d~lL~~t---g----~--i~~~---~----~~~~v-lD~~~----~EreRGITIka~~~~~~~   70 (606)
T Consensus        39 ~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~ptrG~l  118 (333)
T TIGR00750        39 HVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPTRGSL  118 (333)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH
T ss_conf             78766468888577799999899976597689998879759755145456887754422223322898567677666752


Q ss_pred             EC--CCCCEEEEEEEECCCCCH---------HHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             43--788438999961787300---------2799999997302689999868788655899999999709967998326
Q gi|254780321|r   71 TS--TDAKDYQLNLIDTPGHVD---------FTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNK  139 (606)
Q Consensus        71 ~~--~~~~~y~iNlIDTPGH~D---------F~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNK  139 (606)
T Consensus       119 GGls~at~~-~~~lldA~G~-DVI~vETVGVGQSEVd-i~~~aDT~v~v~~pg~GDd~Q~i----KaG~mEiaDI~VVNK  191 (333)
T TIGR00750       119 GGLSKATRE-LVKLLDAAGY-DVILVETVGVGQSEVD-IINMADTFVVVTIPGTGDDVQGI----KAGVMEIADIYVVNK  191 (333)
T ss_pred             HHHHHHHHH-HHHHHHHCCC-CEEEEEEECCCHHHHH-HHHHHCEEEEEECCCCCCHHHHH----HHHHHEEEEEEEEEC
T ss_conf             578799999-9999986389-8799984157524878-87341505898548878346666----544302324878816


Q ss_pred             CCCCCCCC-CCHHHHHHHH-HH--------HHHH------------------HHHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf             78875321-1338887755-53--------2232------------------100011100223200678776321000
Q gi|254780321|r  140 ADLPSADP-DRVKKQIEET-IG--------ISTE------------------DALLVSAKTGEGIPLLLERIVQQLPSP  190 (606)
Q Consensus       140 iD~~~A~~-e~v~~ei~~~-~g--------~~~~------------------~ii~vSAktG~GV~~LLd~Iv~~iP~P  190 (606)
T Consensus       192 aD~~~a~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~~~r~~gW~Ppv~~tsA~~G~Gi~EL~daI~eH~~~l  270 (333)
T TIGR00750       192 ADGEGAEEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEIYRREKGWRPPVLKTSAVEGRGIDELWDAIEEHKKFL  270 (333)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             8876658999999998888888999998653333444302655110105899638873356887167899999999999