HHsearch alignment for GI: 254780321 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=98.19 E-value=6.7e-06 Score=59.09 Aligned_cols=172 Identities=20% Similarity=0.255 Sum_probs=101.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHC---C----C--CCCC---C----CCCEE-ECCCH----HHHHHCCEEEEEEEEEEE
Q ss_conf 179998013898778899999982---9----8--0544---4----43113-05867----798719505232799997
Q gi|254780321|r 12 RNFSIVAHIDHGKSTLADRFIQHC---R----G--LTER---E----MSSQV-LDNMD----IERERGITIKAQTVRLNY 70 (606)
Q Consensus 12 RN~~IiaHvDhGKTTL~d~lL~~t---g----~--i~~~---~----~~~~v-lD~~~----~EreRGITIka~~~~~~~ 70 (606)
T Consensus 39 ~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~ptrG~l 118 (333)
T TIGR00750 39 HVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPTRGSL 118 (333)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCH
T ss_conf 78766468888577799999899976597689998879759755145456887754422223322898567677666752
Q ss_pred EC--CCCCEEEEEEEECCCCCH---------HHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 43--788438999961787300---------2799999997302689999868788655899999999709967998326
Q gi|254780321|r 71 TS--TDAKDYQLNLIDTPGHVD---------FTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNK 139 (606)
Q Consensus 71 ~~--~~~~~y~iNlIDTPGH~D---------F~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNK 139 (606)
T Consensus 119 GGls~at~~-~~~lldA~G~-DVI~vETVGVGQSEVd-i~~~aDT~v~v~~pg~GDd~Q~i----KaG~mEiaDI~VVNK 191 (333)
T TIGR00750 119 GGLSKATRE-LVKLLDAAGY-DVILVETVGVGQSEVD-IINMADTFVVVTIPGTGDDVQGI----KAGVMEIADIYVVNK 191 (333)
T ss_pred HHHHHHHHH-HHHHHHHCCC-CEEEEEEECCCHHHHH-HHHHHCEEEEEECCCCCCHHHHH----HHHHHEEEEEEEEEC
T ss_conf 578799999-9999986389-8799984157524878-87341505898548878346666----544302324878816
Q ss_pred CCCCCCCC-CCHHHHHHHH-HH--------HHHH------------------HHHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 78875321-1338887755-53--------2232------------------100011100223200678776321000
Q gi|254780321|r 140 ADLPSADP-DRVKKQIEET-IG--------ISTE------------------DALLVSAKTGEGIPLLLERIVQQLPSP 190 (606)
Q Consensus 140 iD~~~A~~-e~v~~ei~~~-~g--------~~~~------------------~ii~vSAktG~GV~~LLd~Iv~~iP~P 190 (606)
T Consensus 192 aD~~~a~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~~~r~~gW~Ppv~~tsA~~G~Gi~EL~daI~eH~~~l 270 (333)
T TIGR00750 192 ADGEGAEEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEIYRREKGWRPPVLKTSAVEGRGIDELWDAIEEHKKFL 270 (333)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 8876658999999998888888999998653333444302655110105899638873356887167899999999999