HHsearch alignment for GI: 254780321 and conserved domain: cd01871

>cd01871 Rac1_like Rac1-like subfamily. The Rac1-like subfamily consists of Rac1, Rac2, and Rac3 proteins, plus the splice variant Rac1b that contains a 19-residue insertion near switch II relative to Rac1. While Rac1 is ubiquitously expressed, Rac2 and Rac3 are largely restricted to hematopoietic and neural tissues respectively. Rac1 stimulates the formation of actin lamellipodia and membrane ruffles. It also plays a role in cell-matrix adhesion and cell anoikis. In intestinal epithelial cells, Rac1 is an important regulator of migration and mediates apoptosis. Rac1 is also essential for RhoA-regulated actin stress fiber and focal adhesion complex formation. In leukocytes, Rac1 and Rac2 have distinct roles in regulating cell morphology, migration, and invasion, but are not essential for macrophage migration or chemotaxis. Rac3 has biochemical properties that are closely related to Rac1, such as effector interaction, nucleotide binding, and hydrolysis; Rac2 has a slower nucleoti
Probab=99.24  E-value=7e-10  Score=85.83  Aligned_cols=155  Identities=21%  Similarity=0.209  Sum_probs=97.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHHH
Q ss_conf             99980138987788999999829805444431130586779871950523279999743788438999961787300279
Q gi|254780321|r   14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTY   93 (606)
Q Consensus        14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~~   93 (606)
T Consensus         4 ivlvGd~~VGKTsli~r~~--~~~f~~~~---------------~~Ti~~-~~~~~i-~~~~~~v~l~iwDtaGqe~~~~   64 (174)
T cd01871           4 CVVVGDGAVGKTCLLISYT--TNAFPGEY---------------IPTVFD-NYSANV-MVDGKPVNLGLWDTAGQEDYDR   64 (174)
T ss_pred             EEEECCCCCCHHHHHHHHH--HCCCCCCC---------------CCEEEE-EEEEEE-EECCEEEEEEEECCCCCCCCHH
T ss_conf             9998999986999999997--39999986---------------883788-767999-9999999999986999724067


Q ss_pred             HHHHHHHHCCEEEEEEECCCCCCHHHH-HHHHHHHH---CCCCEEEEECCCCCCCCCC--CC--------H-HHHHHHHH
Q ss_conf             999999730268999986878865589-99999997---0996799832678875321--13--------3-88877555
Q gi|254780321|r   94 EVSRSLSACEGSLLVVDATQGVEAQTL-ANVYQAID---NNHEIITVLNKADLPSADP--DR--------V-KKQIEETI  158 (606)
Q Consensus        94 EV~r~l~a~dgaiLvVdA~~Gvq~QT~-~~~~~A~~---~~l~~I~viNKiD~~~A~~--e~--------v-~~ei~~~~  158 (606)
T Consensus        65 ~~~~~~~~a~~~ilvydi~~~~SF~~i~~~w~~~i~~~~~~~piiLVGnK~DL~~~~~~~~~~~~~~~~~vs~~eg~~~a  144 (174)
T cd01871          65 LRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMA  144 (174)
T ss_pred             HHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             88998740668999986798788999999999999985889997987473013100456778865146775899999999


Q ss_pred             -HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             -32232100011100223200678776321
Q gi|254780321|r  159 -GISTEDALLVSAKTGEGIPLLLERIVQQL  187 (606)
Q Consensus       159 -g~~~~~ii~vSAktG~GV~~LLd~Iv~~i  187 (606)
T Consensus       145 ~~~~~~~f~EtSAk~~~nV~e~F~~lir~i  174 (174)
T cd01871         145 KEIGAVKYLECSALTQKGLKTVFDEAIRAV  174 (174)
T ss_pred             HHCCCCEEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             875997899918788959799999999519