>cd01878 HflX HflX subfamily. A distinct conserved domain with a glycine-rich segment N-terminal of the GTPase domain characterizes the HflX subfamily. The E. coli HflX has been implicated in the control of the lambda cII repressor proteolysis, but the actual biological functions of these GTPases remain unclear. HflX is widespread, but not universally represented in all three superkingdoms.

Probab=99.57 E-value=1.1e-13 Score=111.41 Aligned_cols=152 Identities=30% Similarity=0.331 Sum_probs=90.0 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCC-CC Q ss_conf 31799980138987788999999829805444431130586779871950523279999743788438999961787-30 Q gi|254780321|r 11 IRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPG-HV 89 (606) Q Consensus 11 IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPG-H~ 89 (606) T Consensus 41 ~p~VaivG~PNvGKSTLlN~L~---g~--~~~----v~~~------~~tT~d~~~~~i~~~----~~~~i~l~DT~G~i~ 101 (204) T cd01878 41 IPTVALVGYTNAGKSTLFNALT---GA--DVY----AEDQ------LFATLDPTTRRLRLP----DGREVLLTDTVGFIR 101 (204) T ss_pred CCEEEEECCCCCCHHHHHHHHH---CC--CCE----EECC------CCCCCCCEEEEEEEC----CCCEEEEEECCCCCC T ss_conf 9879998899998999999994---89--963----4156------776457636689956----997799983686446 Q ss_pred HHH---HHH-HHH---HHHCCEEEEEEECCCCCC-HHHHHHHHHHH---HCCCCEEEEECCCCCCCCCCCCHHHHHHHHH Q ss_conf 027---999-999---973026899998687886-55899999999---7099679983267887532113388877555 Q gi|254780321|r 90 DFT---YEV-SRS---LSACEGSLLVVDATQGVE-AQTLANVYQAI---DNNHEIITVLNKADLPSADPDRVKKQIEETI 158 (606) Q Consensus 90 DF~---~EV-~r~---l~a~dgaiLvVdA~~Gvq-~QT~~~~~~A~---~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~ 158 (606) T Consensus 102 ~~p~~lie~~~~tle~i~~AD~il~vvD~s~~~~~~~~~~~~~~l~~l~~~~k~~i~V~NKiDl~~~--~~~~~~----~ 175 (204) T cd01878 102 DLPHQLVEAFRSTLEEVAEADLLLHVVDASDPDYEEQIETVEKVLKELGAEDIPMILVLNKIDLLDD--EELEER----L 175 (204) T ss_pred CCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC--HHHHHH----H T ss_conf 7837899999999999973989999997998536677999999999806555760788867047995--758999----9 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHH Q ss_conf 32232100011100223200678776321 Q gi|254780321|r 159 GISTEDALLVSAKTGEGIPLLLERIVQQL 187 (606) Q Consensus 159 g~~~~~ii~vSAktG~GV~~LLd~Iv~~i 187 (606) T Consensus 176 ~~~~~~~i~ISA~~g~Gid~L~~~I~e~L 204 (204) T cd01878 176 EAGRPDAVFISAKTGEGLDELLEAIEELL 204 (204) T ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHHHC T ss_conf 70899879998868949999999999559

HHsearch alignment for GI: 254780321 and conserved domain: cd01878