HHsearch alignment for GI: 254780321 and conserved domain: cd01879
>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.55 E-value=6.5e-14 Score=112.88 Aligned_cols=147 Identities=24% Similarity=0.360 Sum_probs=93.4
Q ss_pred EECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHH---H
Q ss_conf 9801389877889999998298054444311305867798719505232799997437884389999617873002---7
Q gi|254780321|r 16 IVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDF---T 92 (606)
Q Consensus 16 IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF---~ 92 (606)
T Consensus 1 ivG~pNvGKSTL~N~L~---g~---~~---~vs~------~pgtTrd~~~~~~~-----~~~~~~~lvDtpGi~~~~~~~ 60 (158)
T cd01879 1 LVGNPNVGKTTLFNALT---GA---RQ---KVGN------WPGVTVEKKEGRFK-----LGGKEIEIVDLPGTYSLSPYS 60 (158)
T ss_pred CCCCCCCCHHHHHHHHH---CC---CC---EECC------CCCCEEEEEEEEEE-----ECCEEEEEEECCCCCCCCCCC
T ss_conf 97989888999999995---99---86---4617------89827634788996-----299379999798741256413
Q ss_pred H--HHHHHH---HHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 9--999999---73026899998687886558999999997099679983267887532113-38887755532232100
Q gi|254780321|r 93 Y--EVSRSL---SACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDR-VKKQIEETIGISTEDAL 166 (606)
Q Consensus 93 ~--EV~r~l---~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~-v~~ei~~~~g~~~~~ii 166 (606)
T Consensus 61 ~~e~i~~~~~~~~~~d~vl~vvD~~~-~~~-~l~~~~~l~~~~~p~ivV~NK~D~~~~~~~~~~~~~l~~~~~~---~ii 135 (158)
T cd01879 61 EDEKVARDFLLGEKPDLIVNVVDATN-LER-NLYLTLQLLELGLPVVVALNMIDEAEKRGIKIDLDKLSELLGV---PVV 135 (158)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCH-HHH-HHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCC---CEE
T ss_conf 56789999998517871799977740-677-6899999986599889994027765522546679999987199---489
Q ss_pred HHHHHCCCCCCHHHHHHHHHH
Q ss_conf 011100223200678776321
Q gi|254780321|r 167 LVSAKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 167 ~vSAktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 136 ~iSA~~g~Gi~~L~~~i~el~ 156 (158)
T cd01879 136 PTSARKGEGIDELKDAIAELA 156 (158)
T ss_pred EEECCCCCCHHHHHHHHHHHH
T ss_conf 998778979999999999986