HHsearch alignment for GI: 254780321 and conserved domain: cd04146

>cd04146 RERG_RasL11_like RERG/RasL11-like subfamily. RERG (Ras-related and Estrogen- Regulated Growth inhibitor) and Ras-like 11 are members of a novel subfamily of Ras that were identified based on their behavior in breast and prostate tumors, respectively. RERG expression was decreased or lost in a significant fraction of primary human breast tumors that lack estrogen receptor and are correlated with poor clinical prognosis. Elevated RERG expression correlated with favorable patient outcome in a breast tumor subtype that is positive for estrogen receptor expression. In contrast to most Ras proteins, RERG overexpression inhibited the growth of breast tumor cells in vitro and in vivo. RasL11 was found to be ubiquitously expressed in human tissue, but down-regulated in prostate tumors. Both RERG and RasL11 lack the C-terminal CaaX prenylation motif, where a = an aliphatic amino acid and X = any amino acid, and are localized primarily in the cytoplasm. Both are believed to have tu
Probab=99.26  E-value=1.8e-10  Score=89.84  Aligned_cols=154  Identities=21%  Similarity=0.282  Sum_probs=96.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHHH
Q ss_conf             99980138987788999999829805444431130586779871950523279999743788438999961787300279
Q gi|254780321|r   14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTY   93 (606)
Q Consensus        14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~~   93 (606)
T Consensus         2 iv~vGd~~VGKTsli~rf~--~~~f~~~y-~~T~----------~~~~-~~--~~~---v~~~~~~l~iwDtaG~e~~~~   62 (165)
T cd04146           2 IAVLGASGVGKSALVVRFL--TKRFIGEY-DPNL----------ESLY-SR--QVT---IDGEQVSLEILDTAGQQQADT   62 (165)
T ss_pred             EEEECCCCCCHHHHHHHHH--HCCCCCCC-CCCC----------CCEE-EE--EEE---ECCEEEEEEEEECCCCCCCCH
T ss_conf             9999989977899999997--49899875-9955----------6305-79--999---999999999992898501220


Q ss_pred             H-HHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHH-H-----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             9-999997302689999868788655899999999-7-----09967998326788753211338887755532232100
Q gi|254780321|r   94 E-VSRSLSACEGSLLVVDATQGVEAQTLANVYQAI-D-----NNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDAL  166 (606)
Q Consensus        94 E-V~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~-~-----~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ii  166 (606)
T Consensus        63 ~~~~~~~~~a~~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~piilVGNK~DL~~~r~-Vs~ee~~~~a~~~~~~f~  141 (165)
T cd04146          63 EQLERSIRWADGFVLVYSITDRSSFDEISQLKQLIREIKKRDREIPVILVGNKADLLHYRQ-VSTEEGEKLASELGCLFF  141 (165)
T ss_pred             HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC-CCHHHHHHHHHHCCCEEE
T ss_conf             1255430458789999865888999999999999999846699953998445545210367-799999999998199899


Q ss_pred             HHHHHCC-CCCCHHHHHHHHHH
Q ss_conf             0111002-23200678776321
Q gi|254780321|r  167 LVSAKTG-EGIPLLLERIVQQL  187 (606)
Q Consensus       167 ~vSAktG-~GV~~LLd~Iv~~i  187 (606)
T Consensus       142 E~SAk~~~~~V~~~F~~l~~~i  163 (165)
T cd04146         142 EVSAAEDYDGVHSVFHELCREV  163 (165)
T ss_pred             EEECCCCCCCHHHHHHHHHHHH
T ss_conf             9752087826999999999996