HHsearch alignment for GI: 254780321 and conserved domain: pfam00009
>pfam00009 GTP_EFTU Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.
Probab=100.00 E-value=5.2e-44 Score=314.96 Aligned_cols=176 Identities=42% Similarity=0.586 Sum_probs=155.1
Q ss_pred HHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC--CEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECC
Q ss_conf 253179998013898778899999982980544443--113058677987195052327999974378843899996178
Q gi|254780321|r 9 SRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMS--SQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTP 86 (606)
Q Consensus 9 ~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~--~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTP 86 (606)
T Consensus 1 ~~~rnVaivG~~n~GKSTL~n~Ll~~~~~i~~~~~~~~~~~~d~~~~E~~rgiTi~~~~~~~~-----~~~~~i~~iDtP 75 (185)
T pfam00009 1 KRHRNIGIIGHVDHGKTTLTDALLYVTGAIDKRGEVKQEGELDRLKEERERGITIKIAAVSFE-----TKKRHINIIDTP 75 (185)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEEE-----ECCCEEEEEECC
T ss_conf 996789999389944999999997154876546431003333655888857826987699996-----089368999899
Q ss_pred CCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCCCHHHHHHHHH------H
Q ss_conf 730027999999973026899998687886558999999997099679983267887-532113388877555------3
Q gi|254780321|r 87 GHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLP-SADPDRVKKQIEETI------G 159 (606)
Q Consensus 87 GH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~-~A~~e~v~~ei~~~~------g 159 (606)
T Consensus 76 Gh~~f~~~~~~~l~~aD~~vlVvda~~G~~~qt~~~~~~~~~~~~p~iv~vNKiD~v~~~~~~~~~~e~~~~ll~~~~~~ 155 (185)
T pfam00009 76 GHVDFTKEMIRGAAQADGAILVVDAVEGVMPQTREHLLLAKQLGVPIIVFINKMDRVDDAELDEVVEEISRELLEKYGFG 155 (185)
T ss_pred CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87143999999986465642999867685323099999999828987999977327776769999999999988873248
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 223210001110022320067877632100
Q gi|254780321|r 160 ISTEDALLVSAKTGEGIPLLLERIVQQLPS 189 (606)
Q Consensus 160 ~~~~~ii~vSAktG~GV~~LLd~Iv~~iP~ 189 (606)
T Consensus 156 ~~~~pivpiSA~~G~gv~~Ll~~i~~~lP~ 185 (185)
T pfam00009 156 GETIPVIPGSALTGEGIDTLLEALDLYLPS 185 (185)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 998869996789997989999999977859