HHsearch alignment for GI: 254780321 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=99.41 E-value=1.2e-11 Score=97.64 Aligned_cols=150 Identities=23% Similarity=0.253 Sum_probs=99.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEE-EEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf 99980138987788999999829805444431130586779871950523-27999974378843899996178730027
Q gi|254780321|r 14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKA-QTVRLNYTSTDAKDYQLNLIDTPGHVDFT 92 (606)
Q Consensus 14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka-~~~~~~~~~~~~~~y~iNlIDTPGH~DF~ 92 (606)
T Consensus 3 iv~vGd~~vGKTsli~r~~--~~~f~~~y-~--------------~Ti~~~~~k~i---~~~~~~~~l~iwDt~G~e~~~ 62 (164)
T smart00173 3 LVVLGSGGVGKSALTIQFV--QGHFVDDY-D--------------PTIEDSYRKQI---EIDGEVCLLDILDTAGQEEFS 62 (164)
T ss_pred EEEECCCCCCHHHHHHHHH--HCCCCCCC-C--------------CCEEEEEEEEE---EECCEEEEEEEEECCCCCCHH
T ss_conf 9999999978999999997--29799877-8--------------81367899999---999999999999899971035
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHH---HHHHHHH-H----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999730268999986878865589---9999999-7----099679983267887532113388877555322321
Q gi|254780321|r 93 YEVSRSLSACEGSLLVVDATQGVEAQTL---ANVYQAI-D----NNHEIITVLNKADLPSADPDRVKKQIEETIGISTED 164 (606)
Q Consensus 93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~---~~~~~A~-~----~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ 164 (606)
T Consensus 63 ~~~~~~~~~a~~~ilvydi~~---~~Sf~~~~~~~~~i~~~~~~~~~piilvgnK~DL~~~r~V-~~~e~~~~a~~~~~~ 138 (164)
T smart00173 63 AMRDQYMRTGEGFLLVYSITD---RQSFEEIKKFREQILRVKDRDDVPIVLVGNKCDLESERVV-STEEGKELARQWGCP 138 (164)
T ss_pred HHHHHHCCCCCEEEEEEECCC---HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCC-CHHHHHHHHHHCCCE
T ss_conf 677775379877999830798---8999999999999998618888866877753463011789-999999999983998
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 00011100223200678776321
Q gi|254780321|r 165 ALLVSAKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 165 ii~vSAktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 139 ~~E~SAk~g~nV~~~F~~l~~~i 161 (164)
T smart00173 139 FLETSAKERVNVDEAFYDLVREI 161 (164)
T ss_pred EEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99985898817899999999999