HHsearch alignment for GI: 254780322 and conserved domain: COG0144

Probab=96.98  E-value=0.0031  Score=38.18  Aligned_cols=114  Identities=18%  Similarity=0.185  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCC--CEEEEECCHHHHHHHHH-----------HCCCC
Q ss_conf             689999999999789863689870999859985899999862697--08997200113577531-----------10012
Q gi|254780322|r   26 YFLLDRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKI--HRMIRAEISTEFSTLKR-----------EVISC   92 (273)
Q Consensus        26 ~~l~~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~--~~v~~~D~s~~~~~~~~-----------~~~~~   92 (273)
T Consensus       138 ~~vQd~sS~l~a~~L~--p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~  215 (355)
T COG0144         138 IYVQDEASQLPALVLD--PKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNK  215 (355)
T ss_pred             EEEECHHHHHHHHHCC--CCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             9996778766799719--99979688807999769999999668998769974498789999999999719983489951


Q ss_pred             CHHHHC---CCCCCCCHHHH-----HHHHH-------CCCCH----------HHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             001101---43335222666-----66742-------22346----------9999999998187870898406
Q gi|254780322|r   93 PLEEIP---SISQSVDLILS-----PLNLH-------IINDT----------LEMFSKINHMLKPGGMFLAAIP  141 (273)
Q Consensus        93 d~e~l~---~~~~sfDli~s-----~~~l~-------w~~d~----------~~~l~~~~r~LkpgG~~~~s~~  141 (273)
T Consensus       216 d~~~~~~~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTC  289 (355)
T COG0144         216 DARRLAELLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTC  289 (355)
T ss_pred             CCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             33014311345577785998799987711335812320389999999999999999999984487988999902