HHsearch alignment for GI: 254780322 and conserved domain: COG2813

>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].
Probab=99.03  E-value=1.2e-09  Score=75.56  Aligned_cols=109  Identities=17%  Similarity=0.187  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC----------CCHHHHCC
Q ss_conf             99999999789863689870999859985899999862697089972001135775311001----------20011014
Q gi|254780322|r   30 DRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVIS----------CPLEEIPS   99 (273)
Q Consensus        30 ~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~~----------~d~e~l~~   99 (273)
T Consensus       144 D~GS~lLl~~l~~~--~~~~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~Nl~~N~~~~~~v~~s~~~~~v  221 (300)
T COG2813         144 DKGSRLLLETLPPD--LGGKVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKNLAANGVENTEVWASNLYEPV  221 (300)
T ss_pred             CHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf             83889999737755--6996887078842999999986898728998266999999887699739876379981244665


Q ss_pred             CCCCCCHHHHHHHHHCCCCH-----HHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             33352226666674222346-----9999999998187870898406
Q gi|254780322|r  100 ISQSVDLILSPLNLHIINDT-----LEMFSKINHMLKPGGMFLAAIP  141 (273)
Q Consensus       100 ~~~sfDli~s~~~l~w~~d~-----~~~l~~~~r~LkpgG~~~~s~~  141 (273)
T Consensus       222 ~~-kfd~IisNPPfh~G~~v~~~~~~~ii~~A~~~L~~gGeL~iVan  267 (300)
T COG2813         222 EG-KFDLIISNPPFHAGKAVVHSLAQEIIAAAARHLKPGGELWIVAN  267 (300)
T ss_pred             CC-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             44-00689848884677101678899999999976045977999975