HHsearch alignment for GI: 254780322 and conserved domain: COG3897

Probab=95.28  E-value=0.036  Score=31.99  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=65.9

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC-------HHHHCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             987099985998589999986269708997200113577531100120-------0110143335222666667422234
Q gi|254780322|r   46 TFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVISCP-------LEEIPSISQSVDLILSPLNLHIIND  118 (273)
Q Consensus        46 ~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~~~d-------~e~l~~~~~sfDli~s~~~l~w~~d  118 (273)
T Consensus        79 rgkrVLd~gagsgLvaIAaa~aGA-~~v~a~d~~P~~~~ai~lNa~angv~i~~~~~d~~g~~~~~Dl~LagDlfy~~~~  157 (218)
T COG3897          79 RGKRVLDLGAGSGLVAIAAARAGA-AEVVAADIDPWLEQAIRLNAAANGVSILFTHADLIGSPPAFDLLLAGDLFYNHTE  157 (218)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHH-HHHHHCCCCHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCEEEEEEECEECCCHH
T ss_conf             365324415666708899998503-7887627884788885306221562167743133689864038985030028358


Q ss_pred             HHHHHHHHHHHHCCCCEE-EEEECCCCCCHHHH
Q ss_conf             699999999981878708-98406867633477
Q gi|254780322|r  119 TLEMFSKINHMLKPGGMF-LAAIPGIGTLHELR  150 (273)
Q Consensus       119 ~~~~l~~~~r~LkpgG~~-~~s~~~~~~~~el~  150 (273)
T Consensus       158 a~~l~~-~~~~l~~~g~~vlvgdp~R~~lpk~~  189 (218)
T COG3897         158 ADRLIP-WKDRLAEAGAAVLVGDPGRAYLPKKR  189 (218)
T ss_pred             HHHHHH-HHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf             898899-99999857977997289977785544