HHsearch alignment for GI: 254780322 and conserved domain: KOG1331

Probab=98.73  E-value=2.2e-08  Score=68.19  Aligned_cols=104  Identities=16%  Similarity=0.164  Sum_probs=83.2

Q ss_pred             HHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----HCCCCCHHHHCCCCCCCCHHHHHHHHH
Q ss_conf             986368987099985998589999986269708997200113577531-----100120011014333522266666742
Q gi|254780322|r   40 LNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKR-----EVISCPLEEIPSISQSVDLILSPLNLH  114 (273)
Q Consensus        40 l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~-----~~~~~d~e~l~~~~~sfDli~s~~~l~  114 (273)
T Consensus        40 l~~~~~-gsv~~d~gCGngky~~----~~p~~~~ig~D~c~~l~~~ak~~~~~~~~~ad~l~~p~~~~s~d~~lsiavih  114 (293)
T KOG1331          40 LDSQPT-GSVGLDVGCGNGKYLG----VNPLCLIIGCDLCTGLLGGAKRSGGDNVCRADALKLPFREESFDAALSIAVIH  114 (293)
T ss_pred             HHCCCC-CCEEEECCCCCCCCCC----CCCCCEEEECCHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf             850687-6404542468765576----79863154030223220533347986256124442898787600032335444


Q ss_pred             CCCCH---HHHHHHHHHHHCCCCEEEEEECCCCCCHH
Q ss_conf             22346---99999999981878708984068676334
Q gi|254780322|r  115 IINDT---LEMFSKINHMLKPGGMFLAAIPGIGTLHE  148 (273)
Q Consensus       115 w~~d~---~~~l~~~~r~LkpgG~~~~s~~~~~~~~e  148 (273)
T Consensus       115 hlsT~~RR~~~l~e~~r~lrpgg~~lvyvwa~~q~~~  151 (293)
T KOG1331         115 HLSTRERRERALEELLRVLRPGGNALVYVWALEQHQS  151 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCC
T ss_conf             4436778999999999872678856899850112474