HHsearch alignment for GI: 254780322 and conserved domain: KOG1541

Probab=99.60  E-value=2.2e-15  Score=109.11  Aligned_cols=117  Identities=18%  Similarity=0.231  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH------CCCCCH-HHHC
Q ss_conf             689999999999789863689870999859985899999862697089972001135775311------001200-1101
Q gi|254780322|r   26 YFLLDRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKRE------VISCPL-EEIP   98 (273)
Q Consensus        26 ~~l~~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~------~~~~d~-e~l~   98 (273)
T Consensus        30 ~~IQ~em~eRaLELLalp~~~~~~iLDIGCGsGLSg~vL~~~G--h~wiGvDiSpsML~~a~~~e~egdlil~DMG~Glp  107 (270)
T KOG1541          30 VLIQAEMAERALELLALPGPKSGLILDIGCGSGLSGSVLSDSG--HQWIGVDISPSMLEQAVERELEGDLILCDMGEGLP  107 (270)
T ss_pred             EEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHEECCCC--CEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCC
T ss_conf             3221778887898760899887179983457774320021689--55886228989999999766404766312478878


Q ss_pred             CCCCCCCHHHHHHHHHCC-------CCH----HHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             433352226666674222-------346----9999999998187870898406867
Q gi|254780322|r   99 SISQSVDLILSPLNLHII-------NDT----LEMFSKINHMLKPGGMFLAAIPGIG  144 (273)
Q Consensus        99 ~~~~sfDli~s~~~l~w~-------~d~----~~~l~~~~r~LkpgG~~~~s~~~~~  144 (273)
T Consensus       108 frpGtFDg~ISISAvQWLcnA~~s~~~P~~Rl~~FF~tLy~~l~rg~raV~QfYpen  164 (270)
T KOG1541         108 FRPGTFDGVISISAVQWLCNADKSLHVPKKRLLRFFGTLYSCLKRGARAVLQFYPEN  164 (270)
T ss_pred             CCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             899741247886203210146844467389999986645321036861588852454