HHsearch alignment for GI: 254780322 and conserved domain: KOG2352

Probab=97.84  E-value=4.4e-05  Score=48.99  Aligned_cols=105  Identities=10%  Similarity=0.190  Sum_probs=78.1

Q ss_pred             HHHHHHCCCCCC-CEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHH----H-H-----HCCCCCHHHHCCCCCCCC
Q ss_conf             978986368987-0999859985899999862697089972001135775----3-1-----100120011014333522
Q gi|254780322|r   37 AFRLNMINQTFE-NALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTL----K-R-----EVISCPLEEIPSISQSVD  105 (273)
Q Consensus        37 ~~~l~~~~~~~~-~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~----~-~-----~~~~~d~e~l~~~~~sfD  105 (273)
T Consensus        38 ~~~i~~~~~p~~~~~l~lGCGNS~l~e~ly~~G~-~dI~~iD~S~V~V~~m~~~~~~~~~~~~~~~~d~~~l~fedESFd  116 (482)
T KOG2352          38 SGSIMKYLSPSDFKILQLGCGNSELSEHLYKNGF-EDITNIDSSSVVVAAMQVRNAKERPEMQMVEMDMDQLVFEDESFD  116 (482)
T ss_pred             HHHHHHHHCHHHCEEEEECCCCCHHHHHHHHCCC-CCCEECCCCHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCEE
T ss_conf             8888875065451147615887799999986587-774220056899999875145677424889802110357875314


Q ss_pred             HHHHHHHHHCC----------CCHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             26666674222----------34699999999981878708984068
Q gi|254780322|r  106 LILSPLNLHII----------NDTLEMFSKINHMLKPGGMFLAAIPG  142 (273)
Q Consensus       106 li~s~~~l~w~----------~d~~~~l~~~~r~LkpgG~~~~s~~~  142 (273)
T Consensus       117 iVIdkGtlDal~~de~a~~~~~~v~~~~~eVsrvl~~~gk~~svtl~  163 (482)
T KOG2352         117 IVIDKGTLDALFEDEDALLNTAHVSNMLDEVSRVLAPGGKYISVTLV  163 (482)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             88732764001478500234677667776678874269878999861