HHsearch alignment for GI: 254780322 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=98.50 E-value=6.7e-07 Score=59.56 Aligned_cols=93 Identities=18% Similarity=0.260 Sum_probs=71.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC----------------CCCHH-HHCCCCCCCCHH
Q ss_conf 8987099985998589999986269708997200113577531100----------------12001-101433352226
Q gi|254780322|r 45 QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVI----------------SCPLE-EIPSISQSVDLI 107 (273)
Q Consensus 45 ~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~----------------~~d~e-~l~~~~~sfDli 107 (273)
T Consensus 77 ~~pk~VLIiGGGDGg~~rE~lkh~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~~~yDvI 156 (283)
T PRK00811 77 PNPKKVLIIGGGDGGTLREVLKHPSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETENSFDVI 156 (283)
T ss_pred CCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCEE
T ss_conf 99774899568747999998427885679999468999999999838863133029715998278999998452355489
Q ss_pred HHHHHHHCCCCH---------HHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 666674222346---------99999999981878708984068
Q gi|254780322|r 108 LSPLNLHIINDT---------LEMFSKINHMLKPGGMFLAAIPG 142 (273)
Q Consensus 108 ~s~~~l~w~~d~---------~~~l~~~~r~LkpgG~~~~s~~~ 142 (273)
T Consensus 157 I~D~t-----DP~gpa~~Lft~~Fy~~~~~~L~~~Gi~v~Q~~s 195 (283)
T PRK00811 157 IVDST-----DPVGPAEGLFTKEFYENCKRALKEGGIFVAQSES 195 (283)
T ss_pred EEECC-----CCCCHHHHHCCHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 98089-----9886445534599999999853999589992798