HHsearch alignment for GI: 254780322 and conserved domain: PRK05031
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated.
Probab=97.34 E-value=0.00048 Score=42.92 Aligned_cols=61 Identities=16% Similarity=0.054 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHH-CCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC
Q ss_conf 9999999978986-36898709998599858999998626970899720011357753110012
Q gi|254780322|r 30 DRVAKEIAFRLNM-INQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVISC 92 (273)
Q Consensus 30 ~~~a~~l~~~l~~-~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~~~ 92 (273)
T Consensus 190 ~~~~e~l~~~a~~~~~~~~~~vlDLYcG~Gtfsl~LA~~~--~~V~gVE~~~~aV~~A~~NA~~ 251 (363)
T PRK05031 190 AAVNEKMLEWALDATKGSKGDLLELYCGNGNFTLALARNF--RRVLATEISKPSVAAAQYNIAA 251 (363)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHH
T ss_conf 8999999999999761389828986058664269988626--8799995389999999999998