HHsearch alignment for GI: 254780322 and conserved domain: PRK09489

Probab=99.14  E-value=1.4e-10  Score=81.04  Aligned_cols=107  Identities=15%  Similarity=0.140  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC----------CCCCHHHHCC
Q ss_conf             999999997898636898709998599858999998626970899720011357753110----------0120011014
Q gi|254780322|r   30 DRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREV----------ISCPLEEIPS   99 (273)
Q Consensus        30 ~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~----------~~~d~e~l~~   99 (273)
T Consensus       182 D~GS~lLL~~l~~--~~~g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~N~l~~~v~~sd~~~--~  257 (342)
T PRK09489        182 DVGSQLLLSTLTP--HTKGKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAANGLEGEVFASNVFS--E  257 (342)
T ss_pred             CHHHHHHHHHCCC--CCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCC--C
T ss_conf             8799999973783--24884786067817999999986999769999688999999999899809886899756445--6


Q ss_pred             CCCCCCHHHHHHHHHCCCC-----HHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             3335222666667422234-----6999999999818787089840
Q gi|254780322|r  100 ISQSVDLILSPLNLHIIND-----TLEMFSKINHMLKPGGMFLAAI  140 (273)
Q Consensus       100 ~~~sfDli~s~~~l~w~~d-----~~~~l~~~~r~LkpgG~~~~s~  140 (273)
T Consensus       258 v~~~fD~IvsNPPFH~G~~~~~~i~~~fi~~A~~~L~~gG~L~iVA  303 (342)
T PRK09489        258 IKGRFDMIISNPPFHDGIQTSLDAAQTLIRGAVRHLNSGGELRIVA  303 (342)
T ss_pred             CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             5567898996885215752658999999999998612498899998