HHsearch alignment for GI: 254780322 and conserved domain: PTZ00146
>PTZ00146 fibrillarin; Provisional.
Probab=97.11 E-value=0.0015 Score=40.03 Aligned_cols=106 Identities=18% Similarity=0.129 Sum_probs=70.0
Q ss_pred HHHHHHHCC-CCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEECCHHHH----HHH--HHHC---CCCCHHHH---CCCC
Q ss_conf 997898636-89870999859985899999862-697089972001135----775--3110---01200110---1433
Q gi|254780322|r 36 IAFRLNMIN-QTFENALELHGITGIVGYTCMET-KKIHRMIRAEISTEF----STL--KREV---ISCPLEEI---PSIS 101 (273)
Q Consensus 36 l~~~l~~~~-~~~~~vLdlGcGtG~~~~~l~~~-~~~~~v~~~D~s~~~----~~~--~~~~---~~~d~e~l---~~~~ 101 (273)
T Consensus 124 Il~Gl~~i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~R~NIvPIleDAr~P~kYr~lV 203 (296)
T PTZ00146 124 IYGGVASIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKRRTNIVPIIEDARYPQKYRMLV 203 (296)
T ss_pred HHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHC
T ss_conf 97696444437999899851467986556665017886199997064668899999722798335777789746755424
Q ss_pred CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 352226666674222346999999999818787089840686
Q gi|254780322|r 102 QSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPGI 143 (273)
Q Consensus 102 ~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~~ 143 (273)
T Consensus 204 ~~VDvIf~DVAQp--dQarI~~~Na~~FLK~gG~~~i~IKAr 243 (296)
T PTZ00146 204 PMVDCIFADVAQP--DQARIVALNAQHFLKNGGHFVISIKAN 243 (296)
T ss_pred CCCCEEEECCCCH--HHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 5555899617876--589999999998531698899999726