HHsearch alignment for GI: 254780322 and conserved domain: PTZ00146

>PTZ00146 fibrillarin; Provisional.
Probab=97.11  E-value=0.0015  Score=40.03  Aligned_cols=106  Identities=18%  Similarity=0.129  Sum_probs=70.0

Q ss_pred             HHHHHHHCC-CCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEECCHHHH----HHH--HHHC---CCCCHHHH---CCCC
Q ss_conf             997898636-89870999859985899999862-697089972001135----775--3110---01200110---1433
Q gi|254780322|r   36 IAFRLNMIN-QTFENALELHGITGIVGYTCMET-KKIHRMIRAEISTEF----STL--KREV---ISCPLEEI---PSIS  101 (273)
Q Consensus        36 l~~~l~~~~-~~~~~vLdlGcGtG~~~~~l~~~-~~~~~v~~~D~s~~~----~~~--~~~~---~~~d~e~l---~~~~  101 (273)
T Consensus       124 Il~Gl~~i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~R~NIvPIleDAr~P~kYr~lV  203 (296)
T PTZ00146        124 IYGGVASIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKRRTNIVPIIEDARYPQKYRMLV  203 (296)
T ss_pred             HHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHC
T ss_conf             97696444437999899851467986556665017886199997064668899999722798335777789746755424


Q ss_pred             CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             352226666674222346999999999818787089840686
Q gi|254780322|r  102 QSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPGI  143 (273)
Q Consensus       102 ~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~~  143 (273)
T Consensus       204 ~~VDvIf~DVAQp--dQarI~~~Na~~FLK~gG~~~i~IKAr  243 (296)
T PTZ00146        204 PMVDCIFADVAQP--DQARIVALNAQHFLKNGGHFVISIKAN  243 (296)
T ss_pred             CCCCEEEECCCCH--HHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             5555899617876--589999999998531698899999726