HHsearch alignment for GI: 254780322 and conserved domain: TIGR00080

>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=98.40  E-value=1.1e-06  Score=58.23  Aligned_cols=104  Identities=15%  Similarity=0.110  Sum_probs=76.0

Q ss_pred             HHHHHHHHHH-HCCCCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHCC----------------CCC
Q ss_conf             9999997898-63689870999859985899999862-69708997200113577531100----------------120
Q gi|254780322|r   32 VAKEIAFRLN-MINQTFENALELHGITGIVGYTCMET-KKIHRMIRAEISTEFSTLKREVI----------------SCP   93 (273)
Q Consensus        32 ~a~~l~~~l~-~~~~~~~~vLdlGcGtG~~~~~l~~~-~~~~~v~~~D~s~~~~~~~~~~~----------------~~d   93 (273)
T Consensus        68 mvA~m~~yL~nhL-~~~~~vLeiG~GSGY~aavlA~~v~~~G~V~SiEri~~L~~~A~~~Lk~hhseqL~~~NV~v~~GD  146 (228)
T TIGR00080        68 MVAKMTEYLENHL-KPGAKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELVEKARRRLKKHHSEQLGLDNVIVIEGD  146 (228)
T ss_pred             HHHHHHHHHHHHC-CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             9999999888521-403556650478558999999987139718998535788999998765431444068865899778


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             011014333522266666742223469999999998187870898406867
Q gi|254780322|r   94 LEEIPSISQSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPGIG  144 (273)
Q Consensus        94 ~e~l~~~~~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~~~  144 (273)
T Consensus       147 G~~G~~~~APYd~I~~~AA~k~iP------~AL~~QL~eGG~L~--~Pv~~  189 (228)
T TIGR00080       147 GRQGWEEKAPYDAILVTAAAKEIP------KALIDQLEEGGILV--LPVGE  189 (228)
T ss_pred             CCCCHHHCCCCCEEEEECCCCCCC------HHHHHHHHHCCEEE--ECCEE
T ss_conf             865710248835277523789876------57899997289886--20000