HHsearch alignment for GI: 254780322 and conserved domain: TIGR00406
>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=99.06 E-value=2.8e-10 Score=79.25 Aligned_cols=103 Identities=15% Similarity=0.249 Sum_probs=80.4
Q ss_pred HHHHHHHHHHCCCCC--CCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC--------------CCHHH
Q ss_conf 999997898636898--70999859985899999862697089972001135775311001--------------20011
Q gi|254780322|r 33 AKEIAFRLNMINQTF--ENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVIS--------------CPLEE 96 (273)
Q Consensus 33 a~~l~~~l~~~~~~~--~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~~--------------~d~e~ 96 (273)
T Consensus 181 T~LCLe~L~~~d~k~kh~~viD~GCGSGIL~IAa~~LGa-~~~~g~D~DP~Ave~~r~N~~lN~v~~~~~~~~~~~vPe~ 259 (330)
T TIGR00406 181 TSLCLELLEDLDLKDKHKKVIDVGCGSGILSIAALKLGA-AKVVGIDIDPLAVESARKNAELNQVSDRLQVKLENSVPEL 259 (330)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH-HHEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
T ss_conf 899999874014777665478712671789999997512-3112213772899999976874588645764320578753
Q ss_pred HCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 0143335222666667422234699999999981878708984
Q gi|254780322|r 97 IPSISQSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAA 139 (273)
Q Consensus 97 l~~~~~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s 139 (273)
T Consensus 260 ~~~~e~~~DViVANiLA~vi---~~L~p~~~~L~~~~G~lilS 299 (330)
T TIGR00406 260 EQPIEGKADVIVANILAEVI---KELYPQFSRLVKPGGHLILS 299 (330)
T ss_pred CCCCCCCCCEEEECCHHHHH---HHHHHHHHHHCCCCCCEEEH
T ss_conf 45322566757880024578---76413551310689965741