HHsearch alignment for GI: 254780322 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.71 E-value=0.014 Score=34.42 Aligned_cols=89 Identities=8% Similarity=0.005 Sum_probs=58.9
Q ss_pred CCCCEEEECCCCC-HHHHHHHHHCCCCEEEEECCHHHHHHHHHHC-----CCCCHHHH-----CC-CCCCCCHHHHHHHH
Q ss_conf 9870999859985-8999998626970899720011357753110-----01200110-----14-33352226666674
Q gi|254780322|r 46 TFENALELHGITG-IVGYTCMETKKIHRMIRAEISTEFSTLKREV-----ISCPLEEI-----PS-ISQSVDLILSPLNL 113 (273)
Q Consensus 46 ~~~~vLdlGcGtG-~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~-----~~~d~e~l-----~~-~~~sfDli~s~~~l 113 (273)
T Consensus 176 ~g~~VlV~GaG~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A~~lGa~~~i~~~~~~~~~~v~~~t~g~G~Dvvie~~G- 254 (358)
T TIGR03451 176 RGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG- 254 (358)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCC-
T ss_conf 9988999673769999999999839918999919889999999659909973998788999999858988749999999-
Q ss_pred HCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 222346999999999818787089840
Q gi|254780322|r 114 HIINDTLEMFSKINHMLKPGGMFLAAI 140 (273)
Q Consensus 114 ~w~~d~~~~l~~~~r~LkpgG~~~~s~ 140 (273)
T Consensus 255 -----~~~~~~~al~~~~~gG~iv~~G 276 (358)
T TIGR03451 255 -----RPETYKQAFYARDLAGTVVLVG 276 (358)
T ss_pred -----CHHHHHHHHHHHCCCCEEEEEE
T ss_conf -----9899999999762796999992