HHsearch alignment for GI: 254780322 and conserved domain: TIGR03587
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=98.36 E-value=1.1e-06 Score=58.40 Aligned_cols=98 Identities=16% Similarity=0.091 Sum_probs=79.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC------CCCCHHHHCCCCCCCCHHHHHHHHHCC--
Q ss_conf 898709998599858999998626970899720011357753110------012001101433352226666674222--
Q gi|254780322|r 45 QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREV------ISCPLEEIPSISQSVDLILSPLNLHII-- 116 (273)
Q Consensus 45 ~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~------~~~d~e~l~~~~~sfDli~s~~~l~w~-- 116 (273)
T Consensus 42 ~~ikSilE~GcNIGlNL~ALk~L~P~~~l~gIEIN~~A~~~lk~~~~~~~i~n~SIld-~~~~~~~DLv~t~GVLIHinP 120 (204)
T TIGR03587 42 PKIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAKAYLPNINIIQGSLFD-PFKDNFFDLVLTKGVLIHINP 120 (204)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCC-CCCCCCEEEEEEEEEEEEECH
T ss_conf 8888268966884776999987487440499953999999998658972699653346-677874238998308999788
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 34699999999981878708984068676
Q gi|254780322|r 117 NDTLEMFSKINHMLKPGGMFLAAIPGIGT 145 (273)
Q Consensus 117 ~d~~~~l~~~~r~LkpgG~~~~s~~~~~~ 145 (273)
T Consensus 121 ~~L~~vy~~l~~~s~k--yili~EYynp~ 147 (204)
T TIGR03587 121 DNLPTAYRELYRCSNR--YILIAEYYNPS 147 (204)
T ss_pred HHHHHHHHHHHHHHCC--EEEEEEECCCC
T ss_conf 9999999999985205--59999942899