HHsearch alignment for GI: 254780322 and conserved domain: TIGR03587

>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=98.36  E-value=1.1e-06  Score=58.40  Aligned_cols=98  Identities=16%  Similarity=0.091  Sum_probs=79.1

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC------CCCCHHHHCCCCCCCCHHHHHHHHHCC--
Q ss_conf             898709998599858999998626970899720011357753110------012001101433352226666674222--
Q gi|254780322|r   45 QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREV------ISCPLEEIPSISQSVDLILSPLNLHII--  116 (273)
Q Consensus        45 ~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~------~~~d~e~l~~~~~sfDli~s~~~l~w~--  116 (273)
T Consensus        42 ~~ikSilE~GcNIGlNL~ALk~L~P~~~l~gIEIN~~A~~~lk~~~~~~~i~n~SIld-~~~~~~~DLv~t~GVLIHinP  120 (204)
T TIGR03587        42 PKIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAKAYLPNINIIQGSLFD-PFKDNFFDLVLTKGVLIHINP  120 (204)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCC-CCCCCCEEEEEEEEEEEEECH
T ss_conf             8888268966884776999987487440499953999999998658972699653346-677874238998308999788


Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf             34699999999981878708984068676
Q gi|254780322|r  117 NDTLEMFSKINHMLKPGGMFLAAIPGIGT  145 (273)
Q Consensus       117 ~d~~~~l~~~~r~LkpgG~~~~s~~~~~~  145 (273)
T Consensus       121 ~~L~~vy~~l~~~s~k--yili~EYynp~  147 (204)
T TIGR03587       121 DNLPTAYRELYRCSNR--YILIAEYYNPS  147 (204)
T ss_pred             HHHHHHHHHHHHHHCC--EEEEEEECCCC
T ss_conf             9999999999985205--59999942899