HHsearch alignment for GI: 254780322 and conserved domain: pfam11968
>pfam11968 DUF3321 Protein of unknown function (DUF3321). This family is conserved in fungi and is annotated as being a nucleolar protein.
Probab=98.05 E-value=2e-05 Score=50.93 Aligned_cols=153 Identities=17% Similarity=0.187 Sum_probs=95.0
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC------CCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHH
Q ss_conf 5776631746220689999999999789863689------8709998599858999998626970899720011357753
Q gi|254780322|r 13 NRLRSFRQKDFSVYFLLDRVAKEIAFRLNMINQT------FENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLK 86 (273)
Q Consensus 13 ~~~ra~~~~~~~~~~l~~~~a~~l~~~l~~~~~~------~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~ 86 (273)
T Consensus 15 ~YQ~AS~~GQ~~~R--GGdSSK~lv~wL~~~~~~~~~~~~~lr~LEVGALst~N---~~S~~~~~dv~rIDLnSq----~ 85 (220)
T pfam11968 15 AYQLASKLGQSKDR--GGDSSKVLVEWLKPLLVRLKLGEGKLRALEVGALSTKN---ACSKSGLFDVTRIDLNSQ----E 85 (220)
T ss_pred HHHHHHHHCCCCCC--CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC---HHCCCCEEEEEEEECCCC----C
T ss_conf 99999983767778--99723899999777357722377763177554556421---222567477788525899----9
Q ss_pred HHCCCCCHHHHCC---CCCCCCHHHHHHHHHCCCCHH---HHHHHHHHHHCCCCE----EEEEECCCCCCHHHHHHHHHH
Q ss_conf 1100120011014---333522266666742223469---999999998187870----898406867633477889987
Q gi|254780322|r 87 REVISCPLEEIPS---ISQSVDLILSPLNLHIINDTL---EMFSKINHMLKPGGM----FLAAIPGIGTLHELRKALLKA 156 (273)
Q Consensus 87 ~~~~~~d~e~l~~---~~~sfDli~s~~~l~w~~d~~---~~l~~~~r~LkpgG~----~~~s~~~~~~~~el~~~~~~a 156 (273)
T Consensus 86 p~I~qqDFmerPlP~~e~e~F~iISlSLVLNfVP~~~~RGeML~r~~~fL~~~~~~~~~~lFlVLP---lpCv------- 155 (220)
T pfam11968 86 PGILQQDFMERPLPKDESEKFDIISLSLVLNFVPDPADRGEMLKRTTKFLRPPGPGSPPSLFLVLP---LPCV------- 155 (220)
T ss_pred CCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE---HHHH-------
T ss_conf 871443244077888831141358887777416987888699999999717997666632688732---4564-------
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 54542686642167459999999998508985467731
Q gi|254780322|r 157 ETELTGGASPRVIPFMDIKSAGTLMEKSGFISPIIDQD 194 (273)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~ll~~agf~~~~~~~~ 194 (273)
T Consensus 156 ----------~NSRY~~~~~l~~im~slGf~~~~~k~t 183 (220)
T pfam11968 156 ----------TNSRYMDEERLQAIMSSLGFVLVKSKET 183 (220)
T ss_pred ----------HCCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf ----------0440019999999999679558876426