HHsearch alignment for GI: 254780323 and conserved domain: COG2270
>COG2270 Permeases of the major facilitator superfamily [General function prediction only].
Probab=95.45 E-value=0.22 Score=28.65 Aligned_cols=275 Identities=13% Similarity=0.030 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999877886512485446799999999999999999999996338999999999999999999999984210014
Q gi|254780323|r 41 FNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFL 120 (491)
Q Consensus 41 ~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~ 120 (491)
T Consensus 38 fply~~~~~~~~g~~~~~~~a~~gy~~aia~lli-a~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~---~~~L~~----- 108 (438)
T COG2270 38 FPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLI-ALLAPILGTIADYPGPRKKFFGFFTAIGIIS---TFLLWF----- 108 (438)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH---HHHHHH-----
T ss_conf 5799999985058887422559999989999999-9999886466515787205889999999999---999998-----
Q ss_pred CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65234555531010134457876555799999999999999999999999998640989989999999989999999988
Q gi|254780323|r 121 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAG 200 (491)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg 200 (491)
T Consensus 109 ------------i~~~-------s~~~~~l~~~il~~i~~~~s~-Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 109 ------------IPPG-------SYLLLLLLFLILASIGFEFSN-VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILL 168 (438)
T ss_pred ------------HCCC-------CHHHHHHHHHHHHHHHCCHHH-EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf ------------0898-------659999999999987300233-00666765405756557402335013643220999
Q ss_pred HHHHHHHHH---CC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 999999630---12----------32248999999999999999999999840245223320000112345788899999
Q gi|254780323|r 201 GIVKTFSKL---TN----------ELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLR 267 (491)
Q Consensus 201 ~~~~~l~~~---~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 267 (491)
T Consensus 169 i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~-~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l-~~g~k~L~~t~k 246 (438)
T COG2270 169 IFVVLGFALGQQTGITIILLGLPPADGEDVRITG-LLAALWWLLFALPMILNVHDAEKISSPPPTAL-RNGFKELKSTFK 246 (438)
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH-HHHHHHHHHHHH
T ss_conf 9999999606544605776236755564321577-89999999998088851665122456541789-999999999999
Q ss_pred HHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98309679-99999999999999999999999999832998999999999999999999999999789999731678999
Q gi|254780323|r 268 MALNSKYL-GYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAI 346 (491)
Q Consensus 268 ~i~~s~yL-~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~ 346 (491)
T Consensus 247 ~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~----lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 247 EIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE----LLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEH
T ss_conf 9962464499999999998239999999999988872812889----999999999999988899999997708842604
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780323|r 347 ITPL 350 (491)
Q Consensus 347 i~Pi 350 (491)
T Consensus 323 ~~lv 326 (438)
T COG2270 323 IGLV 326 (438)
T ss_pred HHHH
T ss_conf 8999