HHsearch alignment for GI: 254780323 and conserved domain: PRK03699
>PRK03699 hypothetical protein; Provisional.
Probab=94.24 E-value=0.43 Score=26.38 Aligned_cols=274 Identities=15% Similarity=0.157 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHH
Q ss_conf 279999999999999999999987788651248544----6799999999999999999999996-33899999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEI----ISFVKLWCVFPSAILFTILYMKLSN-ILETEKLFYVVVSF 101 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~----lp~l~~~~~l~~s~~~~~~y~~l~~-~~~~~~l~~~~~~~ 101 (491)
T Consensus 93 ~s~~~l~v~~fl~Glg~G~~~~~~~~~i~~~~~~~~r~~~l~~~~~~f~v-Ga~i~Pli~~~ll~~~~~W~~~y~~~~~~ 171 (394)
T PRK03699 93 HSLALFSIAMFVLGLVSGITMSIGTFLITHVYEGRQRGSRLLFTDSFFSM-AGMIFPIIAAYLLARSIEWYWVYLCIGLV 171 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 52999999999998678999988999999970600788999999999988-99999999999985699889999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HCCH
Q ss_conf 9999999999984210014652345555310101344578765557999999999999-999999999999986--4098
Q gi|254780323|r 102 FVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELW-GAVMINLMFWQFANR--ITKT 178 (491)
Q Consensus 102 f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~-~~~vis~~FW~~~n~--~f~~ 178 (491)
T Consensus 172 ~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~----~~~~~~~~~~i~~f~yv~~e~~~~~W~p-----tyl~~~~g~~~ 240 (394)
T PRK03699 172 AVAIFILTLFSEFPALGKHAPKTE--APVVKS----KWNFGVIFLAIAALLYILAQLTFISWVP-----EYAQKKFGMSL 240 (394)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCC--CCHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHCCCCCH
T ss_conf 999999999825873222455332--320343----0260899999999999999999999999-----99998279998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99899999999899999999889999996301232248999999999999999999999840245223320000112345
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
T Consensus 241 ~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~----l--~~~~~~a~~~~~-~~--~---------------------- 289 (394)
T PRK03699 241 EDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRI----L--TVLAGLALVLMY-LF--V---------------------- 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H--HHHHHHHHHHHH-HH--H----------------------
T ss_conf 899999999999999999999999988437999----9--999999999999-99--9----------------------
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 788899999983096799999999999999999999999999983299899999999999999999-9999999789999
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSNILK 337 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ll~ 337 (491)
T Consensus 290 ----------~~~~~~~~~~~~--~~~Gff~a~iyp~~~s~~~~~~~~~~~~--~vs~-il~~g~~G~~~~P~i~G~i~~ 354 (394)
T PRK03699 290 ----------TTDNPAHMAYLI--LGLGFFSSAIYTTIITLGSQQTKVASPK--LVNF-ILTCGTIGTMLSFVVTGPIVA 354 (394)
T ss_pred ----------HCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCHH--HHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf ----------758689999999--9999999778899999998755553187--9999-999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 731678999999999999999
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGG 358 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ 358 (491)
T Consensus 355 ~~G~~~~~~~~~~~y~~~~~~ 375 (394)
T PRK03699 355 HFGLQAAMLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 862899999999999999999