HHsearch alignment for GI: 254780323 and conserved domain: PRK09584

>PRK09584 tppB putative tripeptide transporter permease; Reviewed.
Probab=94.78  E-value=0.33  Score=27.25  Aligned_cols=120  Identities=7%  Similarity=-0.101  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             999999999999999978999973167899-9999999999999999984101234666787300207999999999999
Q gi|254780323|r  316 QFIQWTGIVTIVFMILGSNILKSFRWFTSA-IITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNV  394 (491)
Q Consensus       316 ~~~~~v~i~tii~qll~~~ll~r~G~~~~l-~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~  394 (491)
T Consensus       320 ~fqslNpl~IiilaPl~a~lw~~lg~~~~~p~KfaiG~~l~gl~F~vl~~~~~~--~~~--~g~vs~~W-----lv~~Y~  390 (500)
T PRK09584        320 QYQALNPFWIMIGSPILAAIYNKMGDTLPMPHKFAIGMVLCSGAFLVLPLGAKF--AND--AGIVSVNW-----LIASYG  390 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCC--CCCCCHHH-----HHHHHH
T ss_conf             998872799999899999999981777883699999999999999999999986--267--88406899-----999999


Q ss_pred             HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999876344646687775226976736577767888764667779999999
Q gi|254780323|r  395 LSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSF  445 (491)
Q Consensus       395 ~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~  445 (491)
T Consensus       391 l~tigEL~lSPvGLS~vtklAP~~~~s~mMG~w-fls~a~gn~lag~ia~~  440 (500)
T PRK09584        391 LQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW-FLTTAGAALIAGYVAGL  440 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_conf             999999997589999999878599999999999-99999999999999998