HHsearch alignment for GI: 254780323 and conserved domain: PRK09952

>PRK09952 shikimate transporter; Provisional.
Probab=99.04  E-value=6.2e-06  Score=64.58  Aligned_cols=348  Identities=14%  Similarity=0.145  Sum_probs=170.8

Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf             788651248544679999999999999999----9999996338999999999999999999999984210014652345
Q gi|254780323|r   51 DSLVVPHMGAEIISFVKLWCVFPSAILFTI----LYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPES  126 (491)
Q Consensus        51 d~l~~~~~g~e~lp~l~~~~~l~~s~~~~~----~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~  126 (491)
T Consensus        50 ~~~FFp~~~~-~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~si~~m~~~T~lig~--lPty~-------~  119 (438)
T PRK09952         50 NREFFPQVSP-AMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGL--LPSFS-------T  119 (438)
T ss_pred             HHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--CCCHH-------H
T ss_conf             8724999990-799999999999999987589999999997303399999999999999999997--47689-------8


Q ss_pred             HHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5553----101013445787655579999999999999999999999999864098998999999998999999998899
Q gi|254780323|r  127 IRAL----ASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGI  202 (491)
Q Consensus       127 ~~~~----~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~  202 (491)
T Consensus       120 IGi~ApilLv~~R~l------------QGl~~GGE~~~----a---~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~  180 (438)
T PRK09952        120 IGWWAPVLLVTLRAI------------QGFAVGGEWGG----A---ALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL  180 (438)
T ss_pred             HHHHHHHHHHHHHHH------------HHHHHHHHHHH----H---HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
T ss_conf             888999999999999------------78887612889----9---9999996887773244049999889999999999


Q ss_pred             HHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
Q ss_conf             999963012322489999-9999999999999999984024522332000011234578889999998309679999999
Q gi|254780323|r  203 VKTFSKLTNELMIYYSML-TLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLL  281 (491)
Q Consensus       203 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~  281 (491)
T Consensus       181 ~~~l~~~l~~~~~~~wGWRipFlig~l~~li~l~iR~~l~Esp~f~~~~~~~~~~~~~~p~~e~~~~~~~~-~l~~~~l~  259 (438)
T PRK09952        181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGA-FLKIIALR  259 (438)
T ss_pred             HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HHHHHHHH
T ss_conf             99999836888885314299999999999999999982788878999876233443346699999986599-99999999


Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999-999983299899999999999999999999999978999973167899999999999999999
Q gi|254780323|r  282 VICYGTAINLVEGPWK-EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF  360 (491)
Q Consensus       282 v~~~~~~~tl~e~~~k-~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff  360 (491)
T Consensus       260 -~~-~~~~~y~~~~~~~~y~~~~l~~~~---~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~  334 (438)
T PRK09952        260 -LC-ELLTMYIVTAFALNYSTQNLGLPR---ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF  334 (438)
T ss_pred             -HH-HHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             -99-999999999999999998728889---9999999999999999999999999983634999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99841012346667873002079999999999999998763446466877752269767365777678887646677799
Q gi|254780323|r  361 VFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGA  440 (491)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs  440 (491)
T Consensus       335 ~~l~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP  397 (438)
T PRK09952        335 MALEA--------------QSIFWIVFFSIMLANIAHDMVVCVQQPM---FTEMFGASYRYSGAGVGYQVASVVGGGFTP  397 (438)
T ss_pred             HHHHC--------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99843--------------8689999999999999999998899999---998688605576899999999999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999983
Q gi|254780323|r  441 VIQSFIFMLF  450 (491)
Q Consensus       441 ~~~~~l~~~~  450 (491)
T Consensus       398 ~i~~~L~~~~  407 (438)
T PRK09952        398 FIAAALVTYF  407 (438)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999976