HHsearch alignment for GI: 254780323 and conserved domain: pfam05977
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=98.51 E-value=0.00022 Score=52.36 Aligned_cols=367 Identities=10% Similarity=0.047 Sum_probs=206.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 38781123279999999999999999999987788651248-54467999999999999999999999963389999999
Q gi|254780323|r 19 CAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMG-AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYV 97 (491)
Q Consensus 19 ~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g-~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~ 97 (491)
T Consensus 5 apLr~~~FR~lw~a~lv---S~~Gtwmq~VA~~Wlv~~lT~S~~~vglV~~a~~LP~-~ll~l~aGvlADr~dRRr~ll~ 80 (524)
T pfam05977 5 APLRNGTFRWIWIASLV---SNLGWLMQTVAASWLMTDISASPLMVALVQAAATLPI-FLLSIPAGAIADNFDRRKVMLA 80 (524)
T ss_pred CCCCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHH
T ss_conf 24577228999999999---9999999999999998765089999999999999889-9999999999982250899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999984210014652345555310101344578765557999999999999999999999999986409
Q gi|254780323|r 98 VVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK 177 (491)
Q Consensus 98 ~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~ 177 (491)
T Consensus 81 ~q~~~~~~a~~La~l~~~--------------------------g~~~~~~Ll~l~f~~G~~~A~~~P-A~qA~vp~lVp 133 (524)
T pfam05977 81 GQLLMAIASALLTVLAAL--------------------------GLLSPWLLLAFTFLIGIGTALNDP-AWQASVGDLVP 133 (524)
T ss_pred HHHHHHHHHHHHHHHHHC--------------------------CCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
T ss_conf 999999999999999985--------------------------987499999999999999999878-99999998579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
T Consensus 134 r~~L~~AvALns~~~N~aR~iGPAlgG~Lia~~G~~~~F~lnAlSyl~~--i~~L~----~~~~~~-----~~~~~p~e~ 202 (524)
T pfam05977 134 RRDVPAAVALNSVGYNLARSVGPALGGLLVAAFGAATAFAVNALSYFAV--IVAIA----RWKRDV-----PPSPLPREN 202 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH----HCCCCC-----CCCCCCCCC
T ss_conf 9788989999858998899988899999999772699999999999999--99999----478778-----898888877
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
T Consensus 203 ~~~a~~~Glryv~~sp~lr~vl~~~~~~~~~~~~~~aLLPl~Ar~~l~gg---a~~yGlLl~~~G~GAv~GAl~l~~lr~ 279 (524)
T pfam05977 203 LFGALRAGLRYTAMSREIRSVLVRAAAFGLSASAVWALLPLVARDLLGGD---AGFYGILLGAFGAGAVLGALILSRLRR 279 (524)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 68899999999970966999999999999999999999999999983798---147899999999889999998898750
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
Q ss_conf 73167899999999999999999998410123466678730020799999999999999987634464668777522697
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDD 417 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~ 417 (491)
T Consensus 280 ~~~~~~lv~~~~~~~a---~~~~~la~---------------~~~~~l~~~~l~~~G~awi~~lst~n~~---vQ~~~P~ 338 (524)
T pfam05977 280 RLSSERLVLLASVGFA---LCCLSLAL---------------SPSLWVAAIALLLGGACWITALSTLNVA---VQLASPR 338 (524)
T ss_pred CCCHHHHHHHHHHHHH---HHHHHHHH---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCH
T ss_conf 1572438999999999---99999996---------------5189999999999989999999999899---9970879
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 67365777678887646677799999999998300
Q gi|254780323|r 418 EFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPM 452 (491)
Q Consensus 418 ~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~ 452 (491)
T Consensus 339 wvRgR~lslY~~v~~-Ggma~Gs~~WG~vA~~~g~ 372 (524)
T pfam05977 339 WVVGRALSVYLTVFF-GGMAAGSWLWGTVAEALGL 372 (524)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCH
T ss_conf 999999999999998-5678889999998730074