HHsearch alignment of GI: 254780323 and MMDB domain: 1pw4_A_1-229

>1pw4_A (A:1-229) Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli}
Probab=98.41  E-value=0.00016  Score=52.86  Aligned_cols=155  Identities=7%  Similarity=-0.034  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999877886512485446799999999999999999999996338999999999999999999
Q gi|254780323|r   29 FIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAI  108 (491)
Q Consensus        29 ~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~  108 (491)
                      +..+.+.++.....+...-+....+.-.....+...++.....+ ...+..+..+++.+|+++|+.+......+.....+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~~~d~~g~r~~~~~~~~l~~~~~~l  108 (229)
T 1pw4_A           30 FLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISI-AYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF  108 (229)
T ss_dssp             HHHHHHHHHHHHHHHTSHHHHHHHTTSSTTCSSCHHHHHHHHHH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999809599999999999999-99999999999999819789999999999999999


Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             99998421001465234555531010134457876555799999999999999999999999998640989989999999
Q gi|254780323|r  109 FAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATF  188 (491)
Q Consensus       109 f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li  188 (491)
                      +.+...                           ..-+.+...+........+...... ......|.+..++..+..++.
T Consensus       109 ~~~~~~---------------------------~~~~~~~~~~~~~l~g~~~~~~~~~-~~~~~~~~~~~~~rg~~~g~~  160 (229)
T 1pw4_A          109 MGFVPW---------------------------ATSSIAVMFVLLFLCGWFQGMGWPP-CGRTMVHWWSQKERGGIVSVW  160 (229)
T ss_dssp             HHHCHH---------------------------HHSSSSHHHHHHHHHHHHHHHTHHH-HHHHHHTTCTTTHHHHHHHHH
T ss_pred             HHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHH
T ss_conf             999988---------------------------8889999999999998868988899-999999987987651466654


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             989999999988999999630123
Q gi|254780323|r  189 GLVGNVGLIFAGGIVKTFSKLTNE  212 (491)
Q Consensus       189 ~~g~~ig~i~gg~~~~~l~~~~~~  212 (491)
                      .++.++|.++|+.+...+.+..+.
T Consensus       161 ~~~~~lG~~ig~~l~~~~~~~~~~  184 (229)
T 1pw4_A          161 NCAHNVGGGIPPLLFLLGMAWFND  184 (229)
T ss_dssp             HHHHHHHHTSHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             776788888776778888754335