HHsearch results for GI: 254780323 and protein with PDBid: 2cfq_A

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A
Probab=97.60  E-value=0.0055  Score=39.58  Aligned_cols=141  Identities=11%  Similarity=0.022  Sum_probs=70.4

Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             86409899899999999899999999889999996301232248999999999999999999999840245223320000
Q gi|254780323|r  173 NRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRG  252 (491)
Q Consensus       173 n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  252 (491)
                      .............+........+...+........++.+.........  ...++.....     .              
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~~~~~~~~~-----~--------------  307 (417)
T 2cfq_A          249 SFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAG--TIMSVRIIGS-----S--------------  307 (417)
T ss_dssp             HTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH--HHHHHHHHHH-----T--------------
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHH-----H--------------
T ss_conf             886301111101101344321001122222454310000378999999--9999999886-----2--------------


Q ss_pred             CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf             1123457888999999830967999999999999999999999999999832998999999999999999-999999999
Q gi|254780323|r  253 SVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTG-IVTIVFMIL  331 (491)
Q Consensus       253 ~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~-i~tii~qll  331 (491)
                                      ...+++..  ....++.++............+.+..| ++++.+.+|......+ +-..+...+
T Consensus       308 ----------------~~~~~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~g~~ig~~~  368 (417)
T 2cfq_A          308 ----------------FATSALEV--VILKTLHMFEVPFLLVGCFKYITSQFE-VRFSATIYLVCFCFFKQLAMIFMSVL  368 (417)
T ss_dssp             ----------------TCCSHHHH--HHHTTHHHHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHTTTHHHHHHHHTHH
T ss_pred             ----------------CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ----------------24669999--999999999999999999999999879-72899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7899997316789999999999
Q gi|254780323|r  332 GSNILKSFRWFTSAIITPLMIL  353 (491)
Q Consensus       332 ~~~ll~r~G~~~~l~i~Pi~~l  353 (491)
                      .+.+.+++|+..+..+.-.+.+
T Consensus       369 ~G~l~~~~g~~~~~~~~~~~~~  390 (417)
T 2cfq_A          369 AGNMYESIGFQGAYLVLGLVAL  390 (417)
T ss_dssp             HHTHHHHSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCHHHHHHHHHHHHH
T ss_conf             9999999798999999999999