HHsearch results for GI: 254780323 and protein with PDBid: 3o7q_A
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=98.92 E-value=9.6e-06 Score=61.38 Aligned_cols=296 Identities=9% Similarity=-0.040 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 1232799999999999999999999877886512-485446799999999999999999999996338999999999999
Q gi|254780323|r 24 SEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 24 ~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
.-...+......||+..+.+...-++-..+--+- .+.+...++.. .-.....+..+..+++.+|++||+.+......+
T Consensus 23 ~~~~~~~~~~~~ff~~g~~~~~~~~~~p~~~~~~~ls~~~~gli~s-~~~~g~~i~~~~~G~l~Dr~Grk~~l~~~~~~~ 101 (438)
T 3o7q_A 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQS-AFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHH-HHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 6999999999999999999998999999999993949999999999-999999999999999999828339899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT 182 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK 182 (491)
.+..+++++.-.. .+.|.....-.....-...... .-..+.+|.+.+++..
T Consensus 102 ~ig~~l~~~a~~~----------------------------~~~~~~l~~r~~~G~~~g~~~~-~~~~~i~~~~~~~~r~ 152 (438)
T 3o7q_A 102 ALGAALFWPAAEI----------------------------MNYTLFLVGLFIIAAGLGCLET-AANPFVTVLGPESSGH 152 (438)
T ss_dssp HHHHHHHHHHHHT----------------------------TCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHSSCSTTHH
T ss_pred HHHHHHHHHHHCC----------------------------CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHH
T ss_conf 8898876641010----------------------------1099999999999713123788-9999999866767888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH--H-------------HHHHHCCCCCCCC
Q ss_conf 999999989999999988999999630123224899999999999999999--9-------------9998402452233
Q gi|254780323|r 183 RFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVY--R-------------WMNLYVLTDPQQY 247 (491)
Q Consensus 183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~--~-------------~~~~~~~~~~~~~ 247 (491)
|..++...+.++|.++++.....+....+...................... . ..........+..
T Consensus 153 ~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (438)
T 3o7q_A 153 FRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFP 232 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988878610232015578774165178999999999999999999862010000012357788999998874100
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2000011234578889999998309679999999999999999999999999998329-989999999999999999999
Q gi|254780323|r 248 SPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFIQWTGIVTI 326 (491)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~~~v~i~ti 326 (491)
..+..+++++++....+..+...++|...........+................+... .+.+..... .........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 309 (438)
T 3o7q_A 233 ALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANY---LTGTMVCFF 309 (438)
T ss_dssp CCTTTCCCCSSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH---HHHHHHHHH
T ss_conf 11000012320023210355655420157889999999999999988778999996147406778877---788988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999789999731678999999999
Q gi|254780323|r 327 VFMILGSNILKSFRWFTSAIITPLMI 352 (491)
Q Consensus 327 i~qll~~~ll~r~G~~~~l~i~Pi~~ 352 (491)
.......+..+|.+.+....+..+..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (438)
T 3o7q_A 310 IGRFTGTWLISRFAPHKVLAAYALIA 335 (438)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 76788777663143057799999999