HHSEARCH alignment of GI: 254780323 and SCOP domain: d1pw4a_

Alignment
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=96.93  E-value=0.015  Score=34.33  Aligned_cols=137  Identities=12%  Similarity=0.062  Sum_probs=69.7

Q ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             40989989999999989999999988999999630123224899999999999999999999984024522332000011
Q gi|254780323|r  175 ITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSV  254 (491)
Q Consensus       175 ~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  254 (491)
                      -.+..++.-.......++.+|.+++|.......+.    ....................      .. .           
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~-~-----------  338 (447)
T d1pw4a_         281 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG----NRGATGVFFMTLVTIATIVY------WM-N-----------  338 (447)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT----CHHHHHHHHHHHHHHHHHHT------TS-C-----------
T ss_pred             CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC----CCCCCCCHHHHHHHHHHHHH------HH-C-----------
T ss_conf             22222024543101124555544431110001233----43332101577888899998------75-0-----------


Q ss_pred             CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf             2345788899999983096799999999999999999999999999983299899999999999999999999-999978
Q gi|254780323|r  255 KKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIV-FMILGS  333 (491)
Q Consensus       255 ~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii-~qll~~  333 (491)
                                    ...++++..++....  +...............+.+|+ +.+....|..+...++...+ ...+.+
T Consensus       339 --------------~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~~g~~~~~~~~g  401 (447)
T d1pw4a_         339 --------------PAGNPTVDMICMIVI--GFLIYGPVMLIGLHALELAPK-KAAGTAAGFTGLFGYLGGSVAASAIVG  401 (447)
T ss_dssp             --------------CTTCHHHHHHHHHHH--HHHHTHHHHHHHHHHHHTSCT-THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             --------------345289999999999--999999999999999987699-799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99997316789999999
Q gi|254780323|r  334 NILKSFRWFTSAIITPL  350 (491)
Q Consensus       334 ~ll~r~G~~~~l~i~Pi  350 (491)
                      .+.+..|+.....+.-.
T Consensus       402 ~~~~~~g~~~~~~~~~~  418 (447)
T d1pw4a_         402 YTVDFFGWDGGFMVMIG  418 (447)
T ss_dssp             HHHHSSCSHHHHHHHHH
T ss_pred             HHHHHHCHHHHHHHHHH
T ss_conf             99987586999999999


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]