HHsearch alignment for GI: 254780325 and conserved domain: COG1194
>COG1194 MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair].
Probab=98.08 E-value=5e-06 Score=55.14 Aligned_cols=107 Identities=21% Similarity=0.347 Sum_probs=73.2
Q ss_pred EEEEEEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEE
Q ss_conf 99999999935986999991789888983822573101787488999988887626520244202556652057886069
Q gi|254780325|r 10 LLVVACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEKFHLL 89 (141)
Q Consensus 10 ~~vv~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~~~~~ 89 (141)
T Consensus 235 ~~~~~~~~~~~~~~~~l~kr~~~gl~~gl~~fP~~e~~~--~~~-----~~~~~~~~~~-----~~~~~~~H~fth~~l~ 302 (342)
T COG1194 235 RRFAAFLILNRDGEVLLEKRPEKGLLGGLWCFPQFEDEA--DLL-----DWLAADGLAA-----EPLGAFRHTFTHFRLT 302 (342)
T ss_pred HHEEEEEEECCCCCHHHHHCCCCCCEECCCCCCCCCCCC--HHH-----HHHHHCCCCC-----CCCCCEEEEEEEEEEE
T ss_conf 003357787068531666276567221112056434332--046-----6765413210-----1243124346689999
Q ss_pred EEEEEEEEECCEECCCHHHEEEECCHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 9999999754837688233157027788324889736989999998
Q gi|254780325|r 90 MPFFVCHCFEGIPQSCEGQQLQWVALDDLQNYSMLPADLSLISFLR 135 (141)
Q Consensus 90 ~~~~~~~~~~~~~~~~E~~~~~Wi~~~el~~~~~~~~~~~ii~~l~ 135 (141)
T Consensus 303 i~-~~a~~~~-----~~~-~~~w~~~~~~~~~~l~~p~~k~l~~~~ 341 (342)
T COG1194 303 IE-LRASASL-----VLS-DGRWYNLSDLESIGLPAPVKKLLQQLK 341 (342)
T ss_pred EE-EEEECCC-----CCC-CCEECCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 99-9863246-----788-734516344431355279999998732