HHsearch alignment for GI: 254780325 and conserved domain: PRK03759

>PRK03759 isopentenyl-diphosphate delta-isomerase; Provisional.
Probab=99.69  E-value=7.7e-16  Score=111.71  Aligned_cols=112  Identities=26%  Similarity=0.416  Sum_probs=82.6

Q ss_pred             EEEEEEEEEEECCCEEEEEEECCCC-CCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE-EEEEEECCCCC
Q ss_conf             4999999999359869999917898-88983822-573101787488999988887626520244202-55665205788
Q gi|254780325|r    9 ILLVVACAVFEPGGKVLLSCRPKDK-SHGEFWEF-PGGKIEDGETPEEALTRELFEELAIVVKPFSLV-PLTFISHPYEK   85 (141)
Q Consensus         9 ~~~vv~~~ii~~~~~iLl~~R~~~~-~~~g~W~l-PGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~-~~~~~~~~~~~   85 (141)
T Consensus        33 lHRafsv~l~~~~g~lllq~Rs~~K~~~pg~w~~s~~gH~~~gE~~~~aa~R~l~EElGi~~~~l~~~~~~f~Y~a~~~~  112 (184)
T PRK03759         33 LHLAFSCYLFDADGRLLVTRRALSKKTWPGVWTNSCCGHPQPGESLEDAIIRRCREELGVEITDLTLVLPDFRYRATDPN  112 (184)
T ss_pred             EEEEEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
T ss_conf             38899999995999699997158973799940035446789998999999999999869883444055003899723899


Q ss_pred             C---EEEEEEEEEEEECCE--ECCCHHHEEEECCHHHHCCC
Q ss_conf             6---069999999975483--76882331570277883248
Q gi|254780325|r   86 F---HLLMPFFVCHCFEGI--PQSCEGQQLQWVALDDLQNY  121 (141)
Q Consensus        86 ~---~~~~~~~~~~~~~~~--~~~~E~~~~~Wi~~~el~~~  121 (141)
T Consensus       113 g~~E~E~~~Vf~~~~-d~~~~pnp~EV~e~~Wv~~~eL~~~  152 (184)
T PRK03759        113 GIVENEVCPVFAARA-TSALQPNPDEVMDYQWVDPADLLRA  152 (184)
T ss_pred             CCCEEEEEEEEEEEE-CCCCCCCHHHHEEEEEECHHHHHHH
T ss_conf             862257999999984-8989899689134689869999999