HHsearch alignment for GI: 254780325 and conserved domain: TIGR02705
>TIGR02705 nudix_YtkD nucleoside triphosphatase YtkD; InterPro: IPR014078 The proteins in this entry belong to the nudix family and share some sequence identity with Escherichia coli MutT but appear not to be functionally interchangeable with it. The functional assignment of the proteins in this family is contentious. Reference challenges the findings of reference , both in interpretation and in enzyme assay results..
Probab=99.52 E-value=3e-14 Score=102.51 Aligned_cols=86 Identities=26% Similarity=0.340 Sum_probs=56.3
Q ss_pred CCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
Q ss_conf 78649999999993598699999178988898382257310178748899998888762652024420255665205788
Q gi|254780325|r 6 LKKILLVVACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEK 85 (141)
Q Consensus 6 mk~~~~vv~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~ 85 (141)
T Consensus 22 ~~~p~HVl--vip~~~~qWLlT~H~----~RGl-EFPGGKvE~GEt~~eAA~REv~EETGA~v~~l~Y~--gQY~Ve~~~ 92 (158)
T TIGR02705 22 SPNPNHVL--VIPRYKDQWLLTEHK----RRGL-EFPGGKVEEGETSKEAAIREVYEETGAIVKELHYI--GQYEVEGED 92 (158)
T ss_pred CCCCCCEE--EEEEECCEEEECCCC----CCCC-CCCCCEECCCCCHHHHHHEECCCCCCEEEEEEEEE--EEEEEECCC
T ss_conf 88969568--975568933440358----7870-47888007998846765100100358075468888--767875899
Q ss_pred -CEEEEEEEEEEEECC
Q ss_conf -606999999997548
Q gi|254780325|r 86 -FHLLMPFFVCHCFEG 100 (141)
Q Consensus 86 -~~~~~~~~~~~~~~~ 100 (141)
T Consensus 93 ~~~f~K~vYfa~V~~l 108 (158)
T TIGR02705 93 DTDFVKDVYFAEVSAL 108 (158)
T ss_pred CCEEEEEEEEEEEEEE
T ss_conf 9665777668899873