HHsearch alignment for GI: 254780325 and conserved domain: cd04665
>cd04665 Nudix_Hydrolase_8 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.65 E-value=1.8e-15 Score=109.53 Aligned_cols=94 Identities=23% Similarity=0.243 Sum_probs=65.8
Q ss_pred EEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEE
Q ss_conf 99999359869999917898889838225731017874889999888876265202442025566520578860699999
Q gi|254780325|r 14 ACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEKFHLLMPFF 93 (141)
Q Consensus 14 ~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (141)
T Consensus 3 V~vi~~~~~~~Ll~~~~~-----rgw~~PGG~~e~gEt~~~aa~RE~~EEtG~~~~~l~~ig~Y~V~~~~~~--~~k~vY 75 (118)
T cd04665 3 VLVICFYDDGLLLVRHKD-----RGWEFPGGHVEPGETIEEAARREVWEETGAELGSLTLVGYYQVDLFESG--FETLVY 75 (118)
T ss_pred EEEEEEECCEEEEEEECC-----CCEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEEEEEEECCCCCC--EEEEEE
T ss_conf 999997899999999289-----9787983041799999999999887732918410689999997689983--688899
Q ss_pred EEEEECCEE--CCCHHHEEEECC
Q ss_conf 999754837--688233157027
Q gi|254780325|r 94 VCHCFEGIP--QSCEGQQLQWVA 114 (141)
Q Consensus 94 ~~~~~~~~~--~~~E~~~~~Wi~ 114 (141)
T Consensus 76 ~a~i~~~~~~~~y~Et~gp~l~~ 98 (118)
T cd04665 76 PAVSAQLEEKASYLETDGPVLFK 98 (118)
T ss_pred EEEEEEEEECCCCCCCCCCEECC
T ss_conf 99964675037743437768716