RPSBLAST alignment of GI: 254780325 and protein with PDBid: 1vcd
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, hydrolase, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus HB8} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A* Length = 126
Score = 78.1 bits (192), Expect = 7e-16
Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 13 VACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFS 72
VF +VLL W FP G E GE+ EEA RE++EE + +
Sbjct: 5 AGGVVFNAKREVLLLRDRMGF-----WVFPKGHPEPGESLEEAAVREVWEETGVRAEVLL 59
Query: 73 LVPLTFISHPYEKFHLLMPFFVCHCFEGIPQSCEGQQLQWVALDDLQNYSMLPADLSLIS 132
+ + + +F+ W + ++ + P DL L+
Sbjct: 60 PLY-PTRYVNPKGVEREVHWFLMRGEGAPRLEEGMTGAGWFSPEEARALLAFPEDLGLLE 118
Query: 133 FLRKH 137
+
Sbjct: 119 VALER 123