HHsearch alignment for GI: 254780327 and conserved domain: CHL00122
>CHL00122 secA preprotein translocase subunit SecA; Validated.
Probab=100.00 E-value=0 Score=2503.84 Aligned_cols=807 Identities=47% Similarity=0.751 Sum_probs=774.5
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99987188557358999999999984228888389899999999999999739988896699999999995766087684
Q gi|254780327|r 8 LASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLGMRPF 87 (890)
Q Consensus 8 ~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg~~~~ 87 (890)
T Consensus 1 ~~~~~f~--n~r~lk~~~~~v~~In~le~~~~~lsd~eL~~kt~~fk~rl~~g~~lddiL~eafA~vrEa~~R~lg~r~~ 78 (891)
T CHL00122 1 MLNNLFN--NKRKLNKYQPLVNQINALEEELKNLTDDELRNKTFKLKKRYQKNQNLNDILPEAFAIVREASFRVLGLRHF 78 (891)
T ss_pred CCCHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9303217--78999999999999998689998379999999999999999779987888699999999998986489764
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf 47999999970794506733680689999999998607999569746927738759999999988294367635987988
Q gi|254780327|r 88 DVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDD 167 (890)
Q Consensus 88 dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~~~~~ 167 (890)
T Consensus 79 dvQl~gg~~Lh~G~iaEM~TGEGKTL~atlp~ylnal~GkgvhvvTvNdYLA~RDae~m~~vy~~lGlsvg~i~~~~~~~ 158 (891)
T CHL00122 79 DVQLIGGLVLNDGKIAEMKTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLARRDSEWMGQIYRFLGLSVGLIQEDMSIE 158 (891)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHH
T ss_conf 69999899984595246506885799999999999755997299806456568669999999998296670208999979
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99740256353344343211122143200002210266743886120354564302421523887652478787434544
Q gi|254780327|r 168 KRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDSIII 247 (890)
Q Consensus 168 ~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg~~~~~~~~~~~~~~~~~ 247 (890)
T Consensus 159 er~~aY~~DItY~Tn~e~gFDyLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPLiIsg~~~~~~~~y~~~~~~~~ 238 (891)
T CHL00122 159 ERKQNYKADITYVTNSELGFDYLRDNMALSLSEVVQRPFNYCIIDEVDSILIDEARTPLIISGPVETPIDKYIVAAEIAN 238 (891)
T ss_pred HHHHHHCCCCEEECCCCEECCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998358927978876222566633236878840889973788640455432256885862798774478999999986
Q ss_pred HHCCC-CEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE
Q ss_conf 30135-51441444432201467999986310168845247576001338999999999999852697316108937897
Q gi|254780327|r 248 QLHPS-DYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNALKSHTLFLRNRDYIVNRDEVVII 326 (890)
Q Consensus 248 ~l~~~-dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~A~~~~~~d~~Yiv~~~~v~iv 326 (890)
T Consensus 239 ~l~~~~dy~~d~~~~~v~lte~G~~~~e~~l~~~~------ly~~~~-~~~~~i~~al~A~~lf~~d~dYiV~d~~v~iv 311 (891)
T CHL00122 239 YLEKDVHYEVDEKNRNIILTDQGILQCEKILKIKD------LYDPED-PWIPYILNAIKAKELFIKNVHYIVRNNEIIIV 311 (891)
T ss_pred HCCCCCCEEECHHHCCCCCCHHHHHHHHHCCCCCC------CCCCCC-HHHHHHHHHHHHHHHHHCCCCEEEECCEEEEE
T ss_conf 43776667862231578506326999986137534------478543-39999999999998760697489988989998
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 55458515686211234899999973024843125664348899830320000134305489999987199679807899
Q gi|254780327|r 327 DEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNV 406 (890)
Q Consensus 327 De~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnk 406 (890)
T Consensus 312 De~TGR~m~grr~s~GLHQaiEaKE~v~i~~e~~t~A~IT~Qn~Fr~y~klsGMTGTA~te~~Ef~~iY~l~Vv~IPtn~ 391 (891)
T CHL00122 312 DEFTGRIMPGRRWSDGLHQAIEAKENVPIQQETQTLASITYQNFFLLYPKLSGMTGTAKTEEVELEKIYNLEVICIPTHR 391 (891)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCC
T ss_conf 67888878999356477999998718877888721366659999854504226756768789999998588479889999
Q ss_pred CEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH--HHHHHHHHHHH
Q ss_conf 6224302034223778899999999999974099079861116789999999986077102231022--47788888753
Q gi|254780327|r 407 PVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNAL--YHEKEAYIISQ 484 (890)
Q Consensus 407 p~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ls~~L~~~~~~~h~vLNAk--~~~~Ea~Iia~ 484 (890)
T Consensus 392 p~~R~D~~d~vy~t~~~K~~Av~~ei~~~h~~GqPVLvGT~SVe~SE~ls~~L~~~gi-~h~vLNAk~~n~~~EA~IiA~ 470 (891)
T CHL00122 392 PMQRKDLPDLVYKTEYSKWKAIADECFDMHKIGRPILVGTTSVEKSELLSQLLEEYQL-PHNLLNAKPENVKRESEIIAQ 470 (891)
T ss_pred CCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCC-CCHHHCCCCCCHHHHHHHHHH
T ss_conf 8500308895778899999999999999996799989834655889999999997478-622023884307899999995
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC-----------------------------------------
Q ss_conf 055870488750244665540276755788865113575-----------------------------------------
Q gi|254780327|r 485 AGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISD----------------------------------------- 523 (890)
Q Consensus 485 AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~----------------------------------------- 523 (890)
T Consensus 471 AG~~gaVTIATNMAGRGTDI~LGGn~~~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (891)
T CHL00122 471 AGRKGAITIATNMAGRGTDIILGGNPEYKAKKKLYDLLVKKKSKTNNTKLNTLSKKTDIFINPLLKELETTSQKFLSVLN 550 (891)
T ss_pred CCCCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 69999389715556898784258862456778877530110022210122211000111122110133333322112222
Q ss_pred ----------------------------------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHC
Q ss_conf ----------------------------------5300899999999877643334540762799826775323355420
Q gi|254780327|r 524 ----------------------------------EEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRRIDNQLR 569 (890)
Q Consensus 524 ----------------------------------~~~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrRid~Qlr 569 (890)
T Consensus 551 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~V~~~GGL~VIgterheSrRIDnQLr 630 (891)
T CHL00122 551 SLLKFLKLSDLEIEKKLNEACEKRIPKISYQCSLRKLYNELLEEYKKIFKKEKKIVKNLGGLYVIGTERHESRRIDNQLR 630 (891)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHC
T ss_conf 10022221036677777766420565215678899999999999888765435778853883899605452125787860
Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54345668672389984230145420210134454210025666214567999999999873334679999998677776
Q gi|254780327|r 570 GRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVL 649 (890)
Q Consensus 570 GRagRQGdpG~s~f~~SleD~l~r~Fgsdri~~lm~klg~~egepIes~~itksIE~AQKkVE~~NFdiRK~LLeYDdVl 649 (890)
T Consensus 631 GRaGRQGDPGsS~F~lSleDdLmr~Fg~e~i~~~m~~l~~~e~~~Ie~k~ItKaIE~AQKkVEg~NFDIRK~LLeYDDVL 710 (891)
T CHL00122 631 GRAGRQGDPGSSRFFLSLEDNLLRIFGGDKISNLMQNLNLDDDLPLESPLLTKSLDSAQKKVEEYYYDIRKQLFEYDEVL 710 (891)
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 74356899986348886056899873756578888742688876513278999999999998775799999987777889
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHH
Q ss_conf 58888999999886401101899998777778877653127888822148788999888872998883103234389989
Q gi|254780327|r 650 NEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRNDNGIDHT 729 (890)
Q Consensus 650 N~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV~~~~~~~~~~eeWDle~L~~~L~~~f~~~~~~~e~~~~~~ld~e 729 (890)
T Consensus 711 N~QRevIY~qR~~IL~~edl~~~I~emie~vIddiV~~~~~~~~~~~~~~~~~~l~~l---l~~~~~-~~~~~~~~~~~~ 786 (891)
T CHL00122 711 NKQRKAIYAERRRILESQSLRDWIIAYGEQTIDDIITALKTPKLPNTNLTNIIKIEDL---LGLPRV-FRFSYLNTLDSN 786 (891)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH---HCCCCC-CCHHHHCCCCHH
T ss_conf 9999999999999970562789999999999999999856876874555679999998---558632-573544559999
Q ss_pred HHHHHHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 999999999999999999---85198989999999999999965799999999887753355540106248999999999
Q gi|254780327|r 730 EMSKRIFAKADKIAEDQE---NSFGTEKMQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKSEAFGF 806 (890)
Q Consensus 730 eI~e~I~~~~~~~y~~K~---e~lg~e~~~elER~IlLq~ID~~WkEHL~~MD~LRqgIgLRaYGQKDPL~EYKkEAF~L 806 (890)
T Consensus 787 elk~~L~~~~~~~y~~kk~~le~i~~e~~~e~ER~IlL~~ID~~W~eHLd~MD~LRegIgLRaYGQKDPL~EYKkEAf~l 866 (891)
T CHL00122 787 ELKKFLFQQFWISYDLKEAQLEQIQPGLMRELERSFLLQQIDSAWKEHLQKMSLLRESIGWRGYGQRDPLIEYKNEAYNL 866 (891)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999999999999999998742199999999999999999899999999999999887764051289999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999998523157
Q gi|254780327|r 807 FNTLLTHLRKDVVSQIARIEPN 828 (890)
Q Consensus 807 FeeMl~~Ik~evV~~L~riqi~ 828 (890)
T Consensus 867 FeeMl~~Ik~evVk~LfrvqIv 888 (891)
T CHL00122 867 FIKMIETIRHLVIYLIFRSQIL 888 (891)
T ss_pred HHHHHHHHHHHHHHHHHHEEEE
T ss_conf 9999999999999998725878