HHsearch alignment for GI: 254780327 and conserved domain: KOG0343
>KOG0343 consensus.
Probab=97.30 E-value=0.001 Score=49.75 Aligned_cols=127 Identities=26% Similarity=0.362 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC--EEEECCCCCHHHHHHHHHHHHHH--------CCCCCEEECCCCHHH
Q ss_conf 99999999576608768447999999970794--50673368068999999999860--------799956974692773
Q gi|254780327|r 70 AFAVVREVARRTLGMRPFDVQLLGGMILHKGC--VAEMKTGEGKTLAAVLPVYLNAL--------SGKGVHVVTVNDYLA 139 (890)
Q Consensus 70 afa~~rea~~R~lg~~~~dvQl~g~~~l~~g~--iaem~TGEGKTL~a~l~~~lnal--------~g~~vhvvTvNdyLA 139 (890)
T Consensus 88 ~fv~~teiQ~~~Ip~a------------L~G~DvlGAAkTGSGKTLAFlvPv-lE~L~r~kWs~~DGlGalIISPTRELA 154 (758)
T KOG0343 88 KFVKMTEIQRDTIPMA------------LQGHDVLGAAKTGSGKTLAFLVPV-LEALYRLKWSPTDGLGALIISPTRELA 154 (758)
T ss_pred CCCCHHHHHHHHCCHH------------CCCCCCCCCCCCCCCCEEEEHHHH-HHHHHHCCCCCCCCCEEEEECCHHHHH
T ss_conf 8756999987641422------------057500010235888446543999-999997177887883269956529999
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCH-HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHC---CCCCCEEEEECCH
Q ss_conf 875999999998829436763598798-899740256353344343211122143200002210---2667438861203
Q gi|254780327|r 140 RRDSNTMSAIYKFLGLSTGVVFHDLSD-DKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMV---QRGHNFAIVDEVD 215 (890)
Q Consensus 140 ~RDa~~m~~~y~~lglsvg~~~~~~~~-~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v---~r~~~~aivDEvD 215 (890)
T Consensus 155 ~QtFevL~kvgk~h~fSaGLiiGG~~~k~E~eRi~~mNILVCTPGRLL-----QHm----de~~~f~t~~lQmLvLDEAD 225 (758)
T KOG0343 155 LQTFEVLNKVGKHHDFSAGLIIGGKDVKFELERISQMNILVCTPGRLL-----QHM----DENPNFSTSNLQMLVLDEAD 225 (758)
T ss_pred HHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCEEEECHHHHH-----HHH----HHCCCCCCCCCEEEEECCHH
T ss_conf 999999998752056431136657126889976625776996617899-----875----41678787760478732088
Q ss_pred HHH
Q ss_conf 545
Q gi|254780327|r 216 SIF 218 (890)
Q Consensus 216 SiL 218 (890)
T Consensus 226 R~L 228 (758)
T KOG0343 226 RML 228 (758)
T ss_pred HHH
T ss_conf 898